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Otago Biochemistry publications: journal articles

Journal - Research Article

Kelly, S. T., & Spencer, H. G. (2017). Population-genetic models of sex-limited genomic imprinting. Theoretical Population Biology, 115, 35-44. doi: 10.1016/j.tpb.2017.03.004

Middleton, A. J., Wright, J. D., & Day, C. L. (2017). Regulation of E2s: A role for additional ubiquitin binding sites? Journal of Molecular Biology, 429(22), 3430-3440. doi: 10.1016/j.jmb.2017.06.008

Ludgate, J. L., Wright, J., Stockwell, P. A., Morison, I. M., Eccles, M. R., & Chatterjee, A. (2017). A streamlined method for analysing genome-wide DNA methylation patterns from low amounts of FFPE DNA. BMC Medical Genomics, 10, 54. doi: 10.1186/s12920-017-0290-1

Summers, E. L., Cumming, M. H., Oulavallickal, T., Roberts, N. J., & Arcus, V. L. (2017). Structures and kinetics for plant nucleoside triphosphate diphosphohydrolases support a domain motion catalytic mechanism. Protein Science. Advance online publication. doi: 10.1002/pro.3199

Newton, M. S., Guo, X., Söderholm, A., Näsvall, J., Lundström, P., Andersson, D. I., … Patrick, W. M. (2017). Structural and functional innovations in the real-time evolution of new (βα)8 barrel enzymes. PNAS, 114(18), 4727-4732. doi: 10.1073/pnas.1618552114

Antoun, J. S., Thomson, W. M., Merriman, T. R., Rongo, R., & Farella, M. (2017). Impact of skeletal divergence on oral health-related quality of life and self-reported jaw function. Korean Journal of Orthodontics, 47(3), 186-194. doi: 10.4041/kjod.2017.47.3.186

Sharma, M., Redpath, G. M., Williams, M. J. A., & McCormick, S. P. A. (2017). Recycling of apolipoprotein(a) after PlgRKT-mediated endocytosis of lipoprotein(a). Circulation Research, 120(7), 1091-1102. doi: 10.1161/circresaha.116.310272

Schmid, J., Day, R., Zhang, N., Dupont, P.-Y., Cox, M. P., Schardl, C. L., … Zhou, Y. (2017). Host tissue environment directs activities of an Epichloë endophyte, while it induces systemic hormone and defense responses in its native perennial ryegrass host. Molecular Plant-Microbe Interactions, 30(2), 138-149. doi: 10.1094/mpmi-10-16-0215-r

Todd, A. S., Walker, R. J., MacGinley, R. J., Kelly, J., Merriman, T. R., Major, T. J., & Johnson, R. J. (2017). Dietary sodium modifies serum uric acid concentrations in humans. American Journal of Hypertension, 30(12), 1196-1202. doi: 10.1093/ajh/hpx123

Newton, M. S., Arcus, V. L., Gerth, M. L., & Patrick, W. M. (2017). Enzyme evolution: Innovation is easy, optimization is complicated. Current Opinion in Structural Biology, 48, 110-116. Advance online publication. doi: 10.1016/

Hilliam, Y., Moore, M. P., Lamont, I. L., Bilton, D., Haworth, C. S., Foweraker, J., … Winstanley, C. (2017). Pseudomonas aeruginosa adaptation and diversification in the non-cystic fibrosis bronchiectasis lung. European Respiratory Journal, 49(4), 1602108. doi: 10.1183/13993003.02108-2016

Morris, J. N., Eaton-Rye, J. J., & Summerfield, T. C. (2017). Phenotypic variation in wild-type substrains of the model cyanobacterium Synechocystis sp. PCC 6803. New Zealand Journal of Botany, 55(1), 25-35. doi: 10.1080/0028825X.2016.1231124

Shavandi, A., Hu, Z., Teh, S., Zhao, J., Carne, A., Bekhit, A., & Bekhit, A. E.-D. A. (2017). Antioxidant and functional properties of protein hydrolysates obtained from squid pen chitosan extraction effluent. Food Chemistry, 227, 194-201. doi: 10.1016/j.foodchem.2017.01.099

Christensen, E. M., Patel, S. M., Korasick, D. A., Campbell, A. C., Krause, K. L., Becker, D. F., & Tanner, J. J. (2017). Resolving the cofactor binding site in the proline biosynthetic enzyme human pyrroline 5-carboxylate reductase 1. Journal of Biological Chemistry. Advance online publication. doi: 10.1074/jbc.M117.780288

Lechtenberg, B. C., Mace, P. D., Sessions, E. H., Williamson, R., Stalder, R., Wallez, Y., … Pasquale, E. B. (2017). Structure-guided strategy for the development of potent bivalent ERK inhibitors. ACS Medicinal Chemistry Letters, 8(7), 726-731. doi: 10.1021/acsmedchemlett.7b00127

Bishop, T. F., Martin, L. W., & Lamont, I. L. (2017). Activation of a cell surface signaling pathway in Pseudomonas aeruginosa requires ClpP protease and new sigma factor synthesis. Frontiers in Microbiology, 8, 2442. doi: 10.3389/fmicb.2017.02442

Loo, L.-H., Bougen-Zhukov, N. M., & Tan, W.-L. C. (2017). Early spatiotemporal-specific changes in intermediate signals are predictive of cytotoxic sensitivity to TNFα and co-treatments. Scientific Reports, 7, 43541. doi: 10.1038/srep43541

Forester, N. T., Lane, G. A., Steringa, M., Lamont, I. L., & Johnson, L. J. (2017). Contrasting roles of fungal siderophores in maintaining iron homeostasis in Epichloë festucae. Fungal Genetics & Biology. Advance online publication. doi: 10.1016/j.fgb.2017.11.003

Wu, C., Jordan, M. D., Newcomb, R. D., Gemmell, N. J., Bank, S., Meusemann, K., Dearden, P. K., … Buckley, T. R. (2017). Analysis of the genome of the New Zealand giant collembolan (Holacanthella duospinosa) sheds light on hexapod evolution. BMC Genomics, 18, 795. doi: 10.1186/s12864-017-4197-1

Peters, B., Casey, J., Aidley, J., Zohrab, S., Borg, M., Twell, D., & Brownfield, L. (2017). A conserved cis-regulatory module determines germline fate through activation of the transcription factor DUO1 promoter. Plant Physiology, 173, 280-293. doi: 10.1104/pp.16.01192

Jackson, S. A., & Eaton-Rye, J. J. (2017). Modular growth vessels for the cultivation of the cyanobacterium Synechococcus sp. PCC 7002. New Zealand Journal of Botany, 55(1), 14-24. doi: 10.1080/0028825X.2016.1231123

Shewaramani, S., Finn, T. J., Leahy, S. C., Kassen, R., Rainey, P. B., & Moon, C. D. (2017). Anaerobically grown Escherichia coli has an enhanced mutation rate and distinct mutational spectra. PLoS Genetics, 13(1), e1006570. doi: 10.1371/journal.pgen.1006570

Pirro, M., Mannarino, M. R., Bianconi, V., De Vuono, S., Sahebkar, A., Bagaglia, F., … Merriman, T. (2017). Uric acid and bone mineral density in postmenopausal osteoporotic women: The link lies within the fat. Osteoporosis International, 28(3), 973-981. doi: 10.1007/s00198-016-3792-3

Ta, K. N., Adam, H., Staedler, Y. M., Schönenberger, J., Harrop, T., Tregear, J., … Jouannic, S. (2017). Differences in meristem size and expression of branching genes are associated with variation in panicle phenotype in wild and domesticated African rice. EvoDevo, 8, 2. doi: 10.1186/s13227-017-0065-y

Lotan, Y., OʼSullivan, P., Raman, J. D., Shariat, S. F., Kavalieris, L., Frampton, C., Guilford, P., … Darling, D. (2017). Clinical comparison of noninvasive urine tests for ruling out recurrent urothelial carcinoma. Urologic Oncology, 35(8), 513.e15-513.e22. doi: 10.1016/j.urolonc.2017.03.008

Wu, R., Tomes, S., Karunairetnam, S., Tustin, S. D., Hellens, R. P., Allan, A. C., Macknight, R. C., & Varkonyi-Gasic, E. (2017). SVP-like MADS box genes control dormancy and budbreak in apple. Frontiers in Plant Science, 8, 477. doi: 10.3389/fpls.2017.00477

Weijman, J. F., Kumar, A., Jamieson, S. A., King, C. M., Caradoc-Davies, T. T., Ledgerwood, E. C., … Mace, P. D. (2017). Structural basis of autoregulatory scaffolding by apoptosis signal-regulating kinase 1. PNAS, 114(11), E2096-E2105. doi: 10.1073/pnas.1620813114

Lee, S. L. J., Horsfield, J. A., Black, M. A., Rutherford, K., Fisher, A., & Gemmell, N. J. (2017). Histological and transcriptomic effects of 17α-methyltestosterone on zebrafish gonad development. BMC Genomics, 18, 557. doi: 10.1186/s12864-017-3915-z

Shavandi, A., Carne, A., Bekhit, A. A., & Bekhit, A. E.-D. A. (2017). An improved method for solubilisation of wool keratin using peracetic acid. Journal of Environmental Chemical Engineering. Advance online publication. doi: 10.1016/j.jece.2017.03.043

Fagerlund, R. D., Wilkinson, M. E., Klykov, O., Barendregt, A., Pearce, F. G., Kieper, S. N., Maxwell, H. W. R., … Krause, K. L., Bostina, M., … Staals, R. H. J., & Fineran, P. C. (2017). Spacer capture and integration by a type I-F Cas1–Cas2-3 CRISPR adaptation complex. PNAS, 114(26), E5122-E5128. doi: 10.1073/pnas.1618421114

Ferla, M. P., Brewster, J. L., Hall, K. R., Evans, G. B., & Patrick, W. M. (2017). Primordial-like enzymes from bacteria with reduced genomes. Molecular Microbiology, 105(4), 508-524. doi: 10.1111/mmi.13737

Mros, S., Carne, A., Ha, M., Bekhit, A. E.-D., Young, W., & McConnell, M. (2017). Comparison of the bioactivity of whole and skimmed digested sheep milk with that of digested goat and cow milk in functional cell culture assays. Small Ruminant Research, 149, 202-208. doi: 10.1016/j.smallrumres.2017.02.018

Liu, Y.-F., Oey, I., Bremer, P., Silcock, P., & Carne, A. (2017). In vitro peptic digestion of ovomucin-depleted egg white affected by pH, temperature and pulsed electric fields. Food Chemistry, 231, 165-174. doi: 10.1016/j.foodchem.2017.03.136

De Smit, E., Clarke, L., Sanfilippo, P. G., Merriman, T. R., Brown, M. A., Hill, C. L., … Giant Cell Arteritis Pathology Network. (2017). Geo-epidemiology of temporal artery biopsy-positive giant cell arteritis in Australia and New Zealand: Is there a seasonal influence? RMD Open, 3(2), e000531. doi: 10.1136/rmdopen-2017-000531

Rasheed, H., Stamp, L. K., Dalbeth, N., & Merriman, T. R. (2017). Interaction of the GCKR and A1CF loci with alcohol consumption to influence the risk of gout. Arthritis Research & Therapy, 19, 161. doi: 10.1186/s13075-017-1369-y

Wu, R., Wang, T., Warren, B. A., Allan, A. C., Macknight, R. C., & Varkonyi-Gasic, E. (2017). Kiwifruit SVP2 gene prevents premature budbreak during dormancy. Journal of Experimental Botany, 68(5), 1071-1082. doi: 10.1093/jxb/erx014

Clare, A. J., Wicky, H. E., Empson, R. M., & Hughes, S. M. (2017). RNA-sequencing analysis reveals a regulatory role for transcription factor Fezf2 in the mature motor cortex. Frontiers in Molecular Neuroscience, 10, 283. doi: 10.3389/fnmol.2017.00283

Khan, A. A., Randhawa, M. A., Carne, A., Mohamed Ahmed, I. A., Barr, D., Reid, M., & Bekhit, A. E.-D. A. (2017). Quality and nutritional minerals in chicken breast muscle treated with low and high pulsed electric fields. Food & Bioprocess Technology. Advance online publication. doi: 10.1007/s11947-017-1997-x

Clark, A. L., King, C. L., Buckley, H. R., Collins, C. J., Dhavale, N., Elliott, G. E., Gosling, A., Halcrow, S. E., … Matisoo-Smith, E., … Tromp, M., Ward, S., & West, K. (2017). Biological anthropology in the indo-pacific region: New approaches to age-old questions. Journal of Indo-Pacific Archaeology, 41, 78-94.

Mortuza, R., Aung, H. L., Taiaroa, G., Opel-Reading, H. K., Kleffmann, T., Cook, G. M., & Krause, K. L. (2017). Overexpression of a newly identified d-amino acid transaminase in Mycobacterium smegmatis complements glutamate racemase deletion. Molecular Microbiology. Advance online publication. doi: 10.1111/mmi.13877

He, W., Phipps-Green, A., Stamp, L. K., Merriman, T. R., & Dalbeth, N. (2017). Population-specific association between ABCG2 variants and tophaceous disease in people with gout. Arthritis Research & Therapy, 19(1), 43. doi: 10.1186/s13075-017-1254-8

Liu, Y.-F., Oey, I., Bremer, P., Carne, A., & Silcock, P. (2017). Effects of pH, temperature and pulsed electric fields on the turbidity and protein aggregation of ovomucin-depleted egg white. Food Research International, 91, 161-170. doi: 10.1016/j.foodres.2016.12.005

Wei, W.-H., Viatte, S., Merriman, T. R., Barton, A., & Worthington, J. (2017). Genotypic variability based association identifies novel non-additive loci DHCR7 and IRF4 in sero-negative rheumatoid arthritis. Scientific Reports, 7(1), 5261. doi: 10.1038/s41598-017-05447-1

Lamping, E., Zhu, J.-y., Niimi, M., & Cannon, R. D. (2017). Role of ectopic gene conversion in the evolution of a Candida krusei pleiotropic drug resistance transporter family. Genetics, 205(4), 1619-1639. doi: 10.1534/genetics.116.194811

Cabout, S., Leask, M. P., Varghese, S., Yi, J., Peters, B., Conze, L. L., … Brownfield, L. (2017). The meiotic regulator JASON utilizes alternative translation initiation sites to produce differentially localized forms. Journal of Experimental Botany, 68(15), 4205-4217. doi: 10.1093/jxb/erx222

Chen, S., Nimick, M., Cridge, A. G., Hawkins, B. C., & Rosengren, R. J. (2017). Anticancer potential of novel curcumin analogs towards castrate-resistant prostate cancer. International Journal of Oncology. Advance online publication. doi: 10.3892/ijo.2017.4207

Dalbeth, N., Allan, J., Gamble, G. D., Phipps-Green, A., Flynn, T. J., Mihov, B., … Stamp, L. K., & Merriman, T. R. (2017). Influence of genetic variants on renal uric acid handling in response to frusemide: An acute intervention study. RMD Open, 3(1), e000424. doi: 10.1136/rmdopen-2016-000424

Best, H. L., Neverman, N. J., Wicky, H. E., Mitchell, N. L., Leitch, B., & Hughes, S. M. (2017). Characterisation of early changes in ovine CLN5 and CLN6 Batten disease neural cultures for the rapid screening of therapeutics. Neurobiology of Disease, 100, 62-74. doi: 10.1016/j.nbd.2017.01.001

Gerth, M. L., Liu, Y., Jiao, W., Zhang, X.-X., Baker, E. N., Lott, J. S., … Johnston, J. M. (2017). Crystal structure of a bicupin protein HutD involved in histidine utilization in Pseudomonas. Proteins, 85(8), 1580-1588. doi: 10.1002/prot.25303

Ellison-Loschmann, L., Sporle, A., Corbin, M., Cheng, S., Harawira, P., Gray, M., … Guilford, P., … Pearce, N. (2017). Risk of stomach cancer in Aotearoa/New Zealand: A Māori population based case-control study. PLoS ONE, 12(7), e0181581. doi: 10.1371/journal.pone.0181581

Fukuzawa, R., Anaka, M. R., Morison, I. M., & Reeve, A. E. (2017). The developmental programme for genesis of the entire kidney is recapitulated in Wilms tumour. PLoS ONE, 12(10), e0186333. doi: 10.1371/journal.pone.0186333

Thorne, M. A. S., Seybold, A., Marshall, C., & Wharton, D. (2017). Molecular snapshot of an intracellular freezing event in an Antarctic nematode. Cryobiology, 75, 117-124. doi: 10.1016/j.cryobiol.2017.01.003

Ariazi, E. A., Taylor, J. C., Black, M. A., Nicolas, E., Slifker, M. J., Azzam, D. J., & Boyd, J. (2017). A new role for ERα: Silencing via DNA methylation of basal, stem cell, and EMT genes. Molecular Cancer Research, 15(2). doi: 10.1158/1541-7786.mcr-16-0283

Ledgerwood, E. C., Marshall, J. W. A., & Weijman, J. F. (2017). The role of peroxiredoxin 1 in redox sensing and transducing. Archives of Biochemistry & Biophysics, 617, 60-67. doi: 10.1016/

Murphy, J. M., Mace, P. D., & Eyers, P. A. (2017). Live and let die: Insights into pseudoenzyme mechanisms from structure. Current Opinion in Structural Biology, 47, 95-104. doi: 10.1016/

Poulter, R., Taiaroa, G., Sumpter, N., Stockwell, P., & Butler, M. (2017). Complete genome sequence of the kiwifruit pathogen Pseudomonas syringae pv. actinidiae biovar 5, originating from Japan. Genome Announcements, 5(50), e01409-17. doi: 10.1128/genomeA.01409-17

Nakatani, Y., Opel-Reading, H. K., Merker, M., Machado, D., Andres, S., Kumar, S. S., … Aung, H. L., Cook, G. M., … Krause, K., & Köser, C. U. (2017). Role of alanine racemase mutations in Mycobacterium tuberculosis D-cycloserine resistance. Antimicrobial Agents & Chemotherapy. Advance online publication. doi: 10.1128/aac.01575-17

Shavandi, A., Bekhit, A. E.-D. A., Carne, A., & Bekhit, A. (2017). Evaluation of keratin extraction from wool by chemical methods for bio-polymer application. Journal of Bioactive & Compatible Polymers, 32(2), 163-177. doi: 10.1177/0883911516662069

Khan, A. A., Randhawa, M. A., Carne, A., Ahmed, I. A. M., Barr, D., Reid, M., & Bekhit, A. E.-D. A. (2017). Effect of low and high pulsed electric field on the quality and nutritional minerals in cold boned beef M. longissimus et lumborum. Innovative Food Science & Emerging Technologies, 41, 135-143. doi: 10.1016/j.ifset.2017.03.002

Kavalieris, L., O'Sullivan, P., Frampton, C., Guilford, P., Darling, D., Jacobson, E., … Lotan, Y. (2017). Performance characteristics of a multigene urine biomarker test for monitoring for recurrent urothelial carcinoma in a multicenter study. Journal of Urology, 197(6), 1419-1426. doi: 10.1016/j.juro.2016.12.010

Welsh, G., Ryder, K., Brewster, J., Walker, C., Mros, S., Bekhit, A. E.-D. A., McConnell, M., & Carne, A. (2017). Comparison of bioactive peptides prepared from sheep cheese whey using a food-grade bacterial and a fungal protease preparation. International Journal of Food Science & Technology, 52(5), 1252-1259. doi: 10.1111/ijfs.13392

Filipčík, P., Curry, J. R., & Mace, P. D. (2017). When worlds collide: Mechanisms at the interface between phosphorylation and ubiquitination. Journal of Molecular Biology, 429(8), 1097-1113. doi: 10.1016/j.jmb.2017.02.011

Nakayama, A., Nakaoka, H., Yamamoto, K., Sakiyama, M., Shaukat, A., Toyoda, Y., … Stamp, L. K., … Merriman, T. R., & Matsuo, H. (2017). GWAS of clinically defined gout and subtypes identifies multiple susceptibility loci that include urate transporter genes. Annals of the Rheumatic Diseases, 76(5), 869-877. doi: 10.1136/annrheumdis-2016-209632

Sopoaga, F., Kokaua, J., van der Meer, J., Lameta-Huro, M., Zaharic, T., Richards, R., & Inder, M. (2017). Evaluating the effectiveness of a programme for improving the participation and academic success of an underrepresented minority group in New Zealand. Evaluation & Program Planning, 65, 20-29. doi: 10.1016/j.evalprogplan.2017.06.002

Maddock, D. J., Gerth, M. L., & Patrick, W. M. (2017). An engineered glycerol dehydratase with improved activity for the conversion of meso-2,3-butanediol to butanone. Biotechnology, 12(12), 1700480. doi: 10.1002/biot.201700480

Muthukaruppan, A., Lasham, A., Blenkiron, C., Woad, K. J., Black, M. A., Knowlton, N., … Shelling, A. N. (2017). Gene expression profling of breast tumours from New Zealand patients. New Zealand Medical Journal, 130(1464), 40-56. Retrieved from

Seybold, A. C., Wharton, D. A., Thorne, M. A. S., & Marshall, C. J. (2017). Investigating trehalose synthesis genes after cold acclimation in the Antarctic nematode Panagrolaimus sp. DAW1. Biology Open. Advance online publication. doi: 10.1242/bio.023341

Haddadian, Z., Eyres, G. T., Carne, A., Everett, D. W., & Bremer, P. (2017). Impact of different milk fat globule membrane preparations on protein composition, xanthine oxidase activity, and redox potential. International Dairy Journal, 64, 14-21. doi: 10.1016/j.idairyj.2016.09.006

Prat, A., Lluch, A., Turnbull, A. K., Dunbier, A. K., Calvo, L., Albanell, J., … Alba, E. (2017). A PAM50-based chemoendocrine score for hormone receptor-positive breast cancer with an intermediate risk of relapse. Clinical Cancer Research, 23(12). doi: 10.1158/1078-0432.ccr-16-2092

Morton, S. E., O'Hare, K. J. M., Maha, J. L. K., Nicolson, M. P., Machado, L., Topless, R., Merriman, T. R., & Linscott, R. J. (2017). Testing the validity of taxonic schizotypy using genetic and environmental risk variables. Schizophrenia Bulletin, 43(3), 633-643. doi: 10.1093/schbul/sbw108

Tirgar, M., Silcock, P., Carne, A., & Birch, E. J. (2017). Effect of extraction method on functional properties of flaxseed protein concentrates. Food Chemistry, 215, 417-424. doi: 10.1016/j.foodchem.2016.08.002

Antoun, J. S., Thomson, W. M., Merriman, T. R., & Farella, M. (2017). Self-reported oral behaviour habits in hyperdivergent and normodivergent facial types. Journal of Oral Rehabilitation, 44(1), 16-21. doi: 10.1111/joor.12452

Ong, L., Morison, I. M., & Ledgerwood, E. C. (2017). Megakaryocytes from CYCS mutation-associated thrombocytopenia release platelets by both proplatelet-dependent and -independent processes. British Journal of Haematology, 176(2), 268-279. doi: 10.1111/bjh.14421

McInnes, T., Zou, D., Rao, D. S., Munro, F. M., Phillips, V. L., McCall, J. L., Black, M. A., Reeve, A. E., & Guilford, P. J. (2017). Genome-wide methylation analysis identifies a core set of hypermethylated genes in CIMP-H colorectal cancer. BMC Cancer, 17, 228. doi: 10.1186/s12885-017-3226-4

Middleton, A. J., Budhidarmo, R., Das, A., Zhu, J., Foglizzo, M., Mace, P. D., & Day, C. L. (2017). The activity of TRAF RING homo- and heterodimers is regulated by zinc finger 1. Nature Communications, 8, 1788. doi: 10.1038/s41467-017-01665-3

Lawrence, S. A., Floge, S. A., Davy, J. E., Davy, S. K., & Wilson, W. H. (2017). Exploratory analysis on Symbiodinium transcriptomes reveals potential latent infection by large dsDNA viruses. Environmental Microbiology, 19(10), 3909-3919. doi: 10.1111/1462-2920.13782

Gosling, A. L., Boocock, J., Dalbeth, N., Harré Hindmarsh, J., Stamp, L. K., Stahl, E. A., … Matisoo-Smith, E. A., & Merriman, T. R. (2017). Mitochondrial genetic variation and gout in Māori and Pacific people living in Aotearoa New Zealand. Annals of the Rheumatic Diseases. Advance online publication. doi: 10.1136/annrheumdis-2017-212416

Oulavallickal, T., Brewster, J. L., McKellar, J. L. O., Fairhurst, M. J., Tenci, N. A., & Gerth, M. L. (2017). The Pseudomonas syringae pv. actinidiae chemoreceptor protein F (PscF) periplasmic sensor domain: Cloning, purification and X-ray crystallographic analysis. Acta Crystallographica Section F, 73(12), 701-705. doi: 10.1107/s2053230x17016831

Khan, A. A., Randhawa, M. A., Carne, A., Ahmed, I. A. M., Al-Juhaimi, F. Y., Barr, D., Reid, M., & Bekhit, A. E.-D. A. (2017). Effect of low and high pulsed electric field processing on macro and micro minerals in beef and chicken. Innovative Food Science & Emerging Technologies, 45, 273-279. Advance online publication. doi: 10.1016/j.ifset.2017.11.012

Stiburkova, B., Pavelcova, K., Zavada, J., Petru, L., Simek, P., Cepek, P., … Merriman, T. R., & Pavelka, K. (2017). Functional non-synonymous variants of ABCG2 and gout risk. Rheumatology. Advance online publication. doi: 10.1093/rheumatology/kex295

Saha, S., Hosmani, P. S., Villalobos-Ayala, K., Miller, S., Shippy, T., Flores, M., … Cridge, A., … Brown, S. J. (2017). Improved annotation of the insect vector of citrus greening disease: Biocuration by a diverse genomics community. Database, 2017, bax032. doi: 10.1093/database/bax032

Ong, L., McDonald, K. O., & Ledgerwood, E. C. (2017). Differentiation and cell density upregulate cytochrome c levels in megakaryoblastic cell lines: Implications for analysis of CYCS-associated thrombocytopenia. PLoS ONE, 12(12), e0190433. doi: 10.1371/journal.pone.0190433

Finn, T. J., Shewaramani, S., Leahy, S. C., Janssen, P. H., & Moon, C. D. (2017). Dynamics and genetic diversification of Escherichia coli during experimental adaptation to an anaerobic environment. PeerJ, 5, e3244. doi: 10.7717/peerj.3244

Cridge, A. G., Lovegrove, M. R., Skelly, J. G., Taylor, S. E., Petersen, G. E. L., Cameron, R. C., & Dearden, P. K. (2017). The honeybee as a model insect for developmental genetics. Genesis, 55(5), e23019. doi: 10.1002/dvg.23019

Macknight, R. C., Laing, W. A., Bulley, S. M., Broad, R. C., Johnson, A. A. T., & Hellens, R. P. (2017). Increasing ascorbate levels in crops to enhance human nutrition and plant abiotic stress tolerance. Current Opinion in Biotechnology, 44, 153-160. doi: 10.1016/j.copbio.2017.01.011

Higashino, T., Takada, T., Nakaoka, H., Toyoda, Y., Stiburkova, B., Miyata, H., … Merriman, T. R., … Matsuo, H. (2017). Multiple common and rare variants of ABCG2 cause gout. RMD Open, 3(2), e000464. doi: 10.1136/rmdopen-2017-000464

Pushparajan, C., Claus, J. D., Marshall, S. D. G., & Visnovsky, G. (2017). Nutritional demands and metabolic characteristics of the DSIR-HA-1179 insect cell line during growth and infection with the Oryctes nudivirus. In Vitro Cellular & Developmental Biology: Animal. Advance online publication. doi: 10.1007/s11626-017-0206-6

Roberts, R. L., Wallace, M. C., Phipps-Green, A. J., Topless, R., Drake, J. M., Tan, P., … Merriman, T. R., & Stamp, L. K. (2017). ABCG2 loss-of-function polymorphism predicts poor response to allopurinol in patients with gout. Pharmacogenomics Journal, 17, 201-203. doi: 10.1038/tpj.2015.101

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Gao, Q., Patani, N., Dunbier, A. K., Ghazoui, Z., Zvelebil, M., Martin, L.-A., & Dowsett, M. (2014). Effect of aromatase inhibition on functional gene modules in estrogen receptor–positive breast cancer and their relationship with antiproliferative response. Clinical Cancer Research, 20(9), 2485-2494. doi: 10.1158/1078-0432.CCR-13-2602

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Heikal, A., Nakatani, Y., Dunn, E., Weimar, M. R., Day, C. L., Baker, E. N., … Cook, G. M. (2014). Structure of the bacterial type II NADH dehydrogenase: A monotopic membrane protein with an essential role in energy generation. Molecular Microbiology, 91(5), 950-964. doi: 10.1111/mmi.12507

Teh, S.-S., Niven, B. E., Bekhit, A. E.-D. A., Carne, A., & Birch, E. J. (2014). The use of microwave and pulsed electric field as a pretreatment step in ultrasonic extraction of polyphenols from defatted hemp seed cake (Cannabis sativa) using response surface methodology. Food & Bioprocess Technology, 7(11), 3064-3076. doi: 10.1007/s11947-014-1313-y

Calcott, M. J., Owen, J. G., Lamont, I. L., & Ackerley, D. F. (2014). Biosynthesis of novel pyoverdines by domain substitution in a non-ribosomal peptide synthetase of Pseudomonas aeruginosa. Applied & Environmental Microbiology, 80(18), 5723-5731. doi: 10.1128/aem.01453-14

Lamberto, I., Lechtenberg, B. C., Olson, E., Mace, P. D., Dawson, P. E., Riedl, S. J., & Pasquale, E. B. (2014). Development and structural analysis of a nanomolar cyclic peptide antagonist for the EphA4 receptor. ACS Chemical Biology, 9(12), 2787-2795. doi: 10.1021/cb500677x

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Nguyen, H. T., Merriman, T. R., & Black, M. A. (2014). The CNVrd2 package: Measurement of copy number at complex loci using high-throughput sequencing data. Frontiers in Genetics, 5, 248. doi: 10.3389/fgene.2014.00248

Dalbeth, N., House, M. E., Gamble, G. D., Pool, B., Horne, A., Purvis, L., … Merriman, M., Cadzow, M., Phipps-Green, A., & Merriman, T. R. (2014). Influence of the ABCG2 gout risk 141 K allele on urate metabolism during a fructose challenge. Arthritis Research & Therapy, 16, R34. doi: 10.1186/ar4463

Patani, N., Dunbier, A. K., Anderson, H., Ghazoui, Z., Ribas, R., Anderson, E., … Dowsett, M. (2014). Differences in the transcriptional response to fulvestrant and estrogen deprivation in ER-positive breast cancer. Clinical Cancer Research, 20(15), 3962-3973. doi: 10.1158/1078-0432.ccr-13-1378

Chen, A., Beetham, H., Black, M. A., Priya, R., Telford, B. J., Guest, J., Wiggins, G. A. R., Godwin, T. D., … Guilford, P. J. (2014). E-cadherin loss alters cytoskeletal organization and adhesion in non-malignant breast cells but is insufficient to induce an epithelial-mesenchymal transition. BMC Cancer, 14, 552. doi: 10.1186/1471-2407-14-552

Gillard, G. B., Garama, D. J., & Brown, C. M. (2014). The transcriptome of the NZ endemic sea urchin Kina (Evechinus chloroticus). BMC Genomics, 15, 45. doi: 10.1186/1471-2164-15-45

Wilson, M. J., Kenny, N. J., & Dearden, P. K. (2014). Components of the dorsal-ventral pathway also contribute to anterior-posterior patterning in honeybee embryos (Apis mellifera). EvoDevo, 5, 11. doi: 10.1186/2041-9139-5-11

Hughes, K., Flynn, T., de Zoysa, J., Dalbeth, N., & Merriman, T. R. (2014). Mendelian randomization analysis associates increased serum urate, due to genetic variation in uric acid transporters, with improved renal function. Kidney International, 85(2), 344-351. doi: 10.1038/ki.2013.353

Nakatani, Y., Larsen, D. S., Cutfield, S. M., & Cutfield, J. F. (2014). Major change in regiospecificity for the exo-1,3-β-glucanase from Candida albicans following its conversion to a glycosynthase. Biochemistry, 53(20), 3318-3326. doi: 10.1021/bi500239m

von Zychilinski, A., Williams, M., McCormick, S., & Kleffmann, T. (2014). Absolute quantification of apolipoproteins and associated proteins on human plasma lipoproteins. Journal of Proteomics, 106, 181-190. doi: 10.1016/j.jprot.2014.04.030

Gebhard, S., Fang, C., Shaaly, A., Leslie, D. J., Weimar, M. R., Kalamorz, F., Carne, A., & Cook, G. M. (2014). Identification and characterization of a bacitracin resistance network in Enterococcus faecalis. Antimicrobial Agents & Chemotherapy, 58(3), 1425-1433. doi: 10.1128/AAC.02111-13

Batt, C., Phipps-Green, A. J., Black, M. A., Cadzow, M., Merriman, M. E., Topless, R., … Harrison, A., Highton, J., … Stamp, L., … Merriman, T. R. (2014). Sugar-sweetened beverage consumption: A risk factor for prevalent gout with SLC2A9 genotype-specific effects on serum urate and risk of gout. Annals of the Rheumatic Diseases, 73(12), 2101-2106. doi: 10.1136/annrheumdis-2013-203600

Biswas, A., Fineran, P. C., & Brown, C. M. (2014). Accurate computational prediction of the transcribed strand of CRISPR noncoding RNAs. Bioinformatics, 30(13), 1805-1813. doi: 10.1093/bioinformatics/btu114

Mabbitt, P. D., Wilbanks, S. M., & Eaton-Rye, J. J. (2014). Structure and function of the hydrophilic Photosystem II assembly proteins: Psb27, Psb28 and Ycf48. Plant Physiology & Biochemistry, 81, 96-107. doi: 10.1016/j.plaphy.2014.02.013

Bernhardt, H. S., & Patrick, W. M. (2014). Genetic code evolution started with the incorporation of glycine, followed by other small hydrophilic amino acids. Journal of Molecular Evolution, 78(6), 307-309. doi: 10.1007/s00239-014-9627-y

Smith, E., Hoy, D., Cross, M., Merriman, T. R., Vos, T., Buchbinder, R., … March, L. (2014). The global burden of gout: Estimates from the Global Burden of Disease 2010 study. Annals of the Rheumatic Diseases, 73(8), 1470-1476. doi: 10.1136/annrheumdis-2013-204647

Merriman, T. R., Choi, H. K., & Dalbeth, N. (2014). The genetic basis of gout. Rheumatic Disease Clinics of North America, 40(2), 279-290. doi: 10.1016/j.rdc.2014.01.009

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Sawaya, S., Bagshaw, A., Buschiazzo, E., Kumar, P., Chowdhury, S., Black, M. A., & Gemmell, N. (2013). Microsatellite tandem repeats are abundant in human promoters and are associated with regulatory elements. PLoS ONE, 8(2), e54710. doi: 10.1371/journal.pone.0054710

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Telfer, E., Graham, N., Stanbra, L., Manley, T., & Wilcox, P. (2013). Extraction of high purity genomic DNA from pine for use in a high-throughput genotyping platform. New Zealand Journal of Forestry Science, 43, 3. doi: 10.1186/1179-5395-43-3

Robinson, P. C., Merriman, T. R., Herbison, P., & Highton, J. (2013). Hospital admissions associated with gout and their co-morbidities in New Zealand and England 1999-2009. Rheumatology, 52(1), 118-126. doi: 10.1093/rheumatology/kes253

Awasthi, A., Woolley, A. G., Lecomte, F. J., Hung, N., Baguley, B. C., Wilbanks, S. M., Jeffs, A. R., & Tyndall, J. D. A. (2013). Variable expression of GLIPR1 correlates with invasive potential in melanoma cells. Frontiers in Oncology, 3, 225. doi: 10.3389/fonc.2013.00225

Nakatani, Y., Kleffmann, T., Linke, K., Condon, S. M., Hinds, M. G., & Day, C. L. (2013). Regulation of ubiquitin transfer by XIAP, a dimeric RING E3 ligase. Biochemical Journal, 450(3), 629-638. doi: 10.1042/BJ20121702

Kumar, V., Kleffmann, T., Hampton, M. B., Cannell, M. B., & Winterbourn, C. C. (2013). Redox proteomics of thiol proteins in mouse heart during ischemia/reperfusion using ICAT reagents and mass spectrometry. Free Radical Biology & Medicine, 58, 109-117. doi: 10.1016/j.freeradbiomed.2013.01.021

Denton, M. J., Kumaramanickavel, G., & Legge, M. (2013). Cells as irreducible wholes: The failure of mechanism and the possibility of an organicist revival. Biology & Philosophy, 28(1), 31-52. doi: 10.1007/s10539-011-9285-z

Najafpour, M. M., Rahimi, F., Sedigh, D. J., Carpentier, R., Eaton-Rye, J. J., Shen, J.-R., & Allakhverdiev, S. I. (2013). Gold or silver deposited on layered manganese oxide: A functional model for the water-oxidizing complex in photosystem II. Photosynthesis Research, 117(1-3), 423-429. doi: 10.1007/s11120-013-9899-x

Archer, J. A., Asher, G. W., Fisher, P. J., Ward, J. F., Scott, I. C., Bixley, M. J., … Morris, C. A. (2013). Genetics of early conception and its relationship to growth traits in red deer (Cervus elaphus). Animal Production Science, 53(10), 1083-1087.

Imhoff, F. M., Yang, D., Mathew, S. F., Clarkson, A. N., Kawagishi, Y., Tate, W. P., Koishi, K., & McLennan, I. S. (2013). The type 2 anti-Müllerian hormone receptor has splice variants that are dominant-negative inhibitors. FEBS Letters, 587(12), 1749-1753. doi: 10.1016/j.febslet.2013.04.014

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Lasham, A., Samuel, W., Cao, H., Patel, R., Mehta, R., Stern, J. L., … Woolley, A. G., … Black, M. A., Shelling, A. N., Print, C. G., & Braithwaite, A. W. (2012). YB-1, the E2F Pathway, and regulation of tumor cell growth. Journal of the National Cancer Institute, 104(2), 133-146. doi: 10.1093/jnci/djr512

Chen-Xu, M., Topless, R., McKinney, C., Merriman, M. E., Phipps-Green, A., Dalbeth, N., … Harrison, A. A., Highton, J., … van Rij, A., Jones, G. T., … Stamp, L. K., … Merriman, T. R. (2012). Replication of association of the interleukin 23 receptor rs1343151 variant with rheumatoid arthritis in Caucasian sample sets. Annals of the Rheumatic Diseases, 71(1), 155-157. doi: 10.1136/annrheumdis-2011-200591

Baratchi, S., Evans, J., Tate, W. P., Abraham, W. C., & Connor, B. (2012). Secreted amyloid precursor proteins promote proliferation and glial differentiation of adult hippocampal neural progenitor cells. Hippocampus, 22(7), 1517-1527. doi: 10.1002/hipo.20988

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Middleton, A. J., Marshall, C. B., Faucher, F., Bar-Dolev, M., Braslavsky, I., Campbell, R. L., … Davies, P. L. (2012). Antifreeze protein from freeze-tolerant grass has a beta-roll fold with an irregularly structured ice-binding site. Journal of Molecular Biology, 416, 713-724. doi: 10.1016/j.jmb.2012.01.032

Hollis-Moffatt, J. E., Phipps-Green, A. J., Chapman, B., Jones, G. T., van Rij, A., Gow, P. J., Harrison, A. A., Highton, J., … Stamp, L. K., … Merriman, T. R. (2012). The renal urate transporter SLC17A1 locus: Confirmation of association with gout. Arthritis Research & Therapy, 14(2), R92. doi: 10.1186/ar3816

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MacKenzie, L. A., Selwood, A. I., & Marshall, C. (2012). Isolation and characterization of an enzyme from the Greenshell™ mussel Perna canaliculus that hydrolyses pectenotoxins and esters of okadaic acid. Toxicon, 60(3), 406-419. doi: 10.1016/j.toxicon.2012.05.005

Jarvis, R. M., Hughes, S. M., & Ledgerwood, E. C. (2012). Peroxiredoxin 1 functions as a signal peroxidase to receive, transduce, and transmit peroxide signals in mammalian cells. Free Radical Biology & Medicine, 53(7), 1522-1530. doi: 10.1016/j.freeradbiomed.2012.08.001

Bentley, R. W., Keown, D. A., Gearry, R. B., Cameron, V. A., Keenan, J., Roberts, R. L., & Day, A. S. (2012). Vitamin D receptor polymorphisms in colorectal cancer in New Zealand: An association study. New Zealand Medical Journal, 125(1356). Retrieved from

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Guiguemde, W. A., Shelat, A. A., Garcia-Bustos, J. F., Diagana, T. T., Gamo, F.-J., & Guy, R. K. (2012). Global phenotypic screening for antimalarials [Review article]. Chemistry & Biology, 19(1), 116-129. doi: 10.1016/j.chembiol.2012.01.004

Wu, R.-M., Walton, E. F., Richardson, A. C., Wood, M., Hellens, R. P., & Varkonyi-Gasic, E. (2012). Conservation and divergence of four kiwifruit SVP-like MADS-box genes suggest distinct roles in kiwifruit bud dormancy and flowering. Journal of Experimental Botany, 63(2), 797-807. doi: 10.1093/jxb/err304

Chatterjee, A., Stockwell, P. A., Rodger, E. J., & Morison, I. M. (2012). Comparison of alignment software for genome-wide bisulphite sequence data. Nucleic Acids Research, 40(10), e79. doi: 10.1093/nar/gks150

Lange, S. J., Maticzka, D., Möhl, M., Gagnon, J. N., Brown, C. M., & Backofen, R. (2012). Global or local? Predicting secondary structure and accessibility in mRNAs. Nucleic Acids Research, 40(12), 5215-5226. doi: 10.1093/nar/gks181

Marsman, J., & Horsfield, J. A. (2012). Long distance relationships: Enhancer-promoter communication and dynamic gene transcription. Biochimica et Biophysica Acta: Gene Regulatory Mechanisms, 1819(11-12), 1217-1227. doi: 10.1016/j.bbagrm.2012.10.008

Zondag, L., Dearden, P. K., & Wilson, M. J. (2012). Deep sequencing and expression of microRNAs from early honeybee (Apis mellifera) embryos reveals a role in regulating early embryonic patterning. BMC Evolutionary Biology, 12, 211. doi: 10.1186/1471-2148-12-211

Lee, Y. F., Miller, L. D., Chan, X. B., Black, M. A., Pang, B., Ong, C. W., … Desai, K. V. (2012). JMJD6 is a driver of cellular proliferation and motility and a marker of poor prognosis in breast cancer. Breast Cancer Research, 14(3), R85. doi: 10.1186/bcr3200

Wilson, M. J., & Dearden, P. K. (2012). Pair-rule gene orthologues have unexpected maternal roles in the honeybee (Apis mellifera). PLoS ONE, 7(9), e46490. doi: 10.1371/journal.pone.0046490

Chatterjee, A., Rodger, E. J., Stockwell, P. A., Weeks, R. J., & Morison, I. M. (2012). Technical considerations for reduced representation bisulfite sequencing with multiplexed libraries. Journal of Biomedicine & Biotechnology, 2012, 741542. doi: 10.1155/2012/741542

Lozano, R., Naghavi, M., Foreman, K., Lim, S., Shibuya, K., Aboyans, V., … Merriman, T. R., … Murray, C. J. L. (2012). Global and regional mortality from 235 causes of death for 20 age groups in 1990 and 2010: A systematic analysis for the Global Burden of Disease Study 2010. Lancet, 380(9859), 2095-2128. doi: 10.1016/S0140-6736(12)61728-0

Shevela, D., Eaton-Rye, J. J., Shen, J.-R., & Govindjee (2012). Photosystem II and the unique role of bicarbonate: A historical perspective. Biochimica et Biophysica Acta: Bioenergetics, 1817(8), 1134-1151. doi: 10.1016/j.bbabio.2012.04.003

Baker, E. S., Luckner, S. R., Krause, K. L., Lambden, P. R., Clarke, I. N., & Ward, V. K. (2012). Inherent structural disorder and dimerisation of murine norovirus NS1-2 protein. PLoS ONE, 7(2), e30534. doi: 10.1371/journal.pone.0030534

Fagerlund, R. D., Ooi, P. L., & Wilbanks, S. M. (2012). Soluble expression and purification of tumor suppressor WT1 and its zinc finger domain. Protein Expression & Purification, 85(2), 165-172. doi: 10.1016/j.pep.2012.08.002

Huang, R. Y.-J., Guilford, P., & Thiery, J. P. (2012). Early events in cell adhesion and polarity during epithelial-mesenchymal transition. Journal of Cell Science, 125(19), 4417-4422. doi: 10.1242/jcs.099697

Roberts, R. L., Gallo, L.-M. D., Barclay, M. L., Gómez-García, M., Cardeña, C., Merriman, T. R., Gearry, R. B., & Martin, J. (2012). Independent replication of an association of CNVR7113.6 with Crohn's disease in caucasians. Inflammatory Bowel Diseases, 18(2), 305-311. doi: 10.1002/ibd.21752

Ha, M., Bekhit, A. E.-D. A., Carne, A., & Hopkins, D. L. (2012). Characterisation of commercial papain, bromelain, actinidin and zingibain protease preparations and their activities toward meat proteins. Food Chemistry, 134(1), 95-105. doi: 10.1016/j.foodchem.2012.02.071

Nakatani, Y., Cutfield, S. M., Cowieson, N. P., & Cutfield, J. F. (2012). Structure and activity of exo-1,3/1,4-β-glucanase from marine bacterium Pseudoalteromonas sp. BB1 showing a novel C-terminal domain. FEBS Journal, 279(3), 464-478. doi: 10.1111/j.1742-4658.2011.08439.x

Bricker, T. M., Roose, J. L., Fagerlund, R. D., Frankel, L. K., & Eaton-Rye, J. J. (2012). The extrinsic proteins of Photosystem II. Biochimica et Biophysica Acta: Bioenergetics, 1817(1), 121-142. doi: 10.1016/j.bbabio.2011.07.006

Chen, A., & Brown, C. (2012). Distinct families of cis-acting RNA replication epsilon elements from hepatitis B viruses. RNA Biology, 9(2), 130-136. doi: 10.4161/rna.18649

Vos, T., Flaxman, A. D., Naghavi, M., Lozano, R., Michaud, C., Ezzati, M., … Derrett, S., … Grainger, R., … Merriman, T. R., … Taylor, W. J., … Thomson, W. M., … Murray, C. J. L. (2012). Years lived with disability (YLDs) for 1160 sequelae of 289 diseases and injuries 1990-2010: A systematic analysis for the Global Burden of Disease Study 2010. Lancet, 380(9859), 2163-2196. doi: 10.1016/S0140-6736(12)61729-2

Evans, G. E., Martínez-Conejero, J. A., Phillipson, G. T. M., Simón, C., McNoe, L. A., Sykes, P. H., … Evans, J. J. (2012). Gene and protein expression signature of endometrial glandular and stromal compartments during the window of implantation. Fertility & Sterility, 97(6), 1365-1373. doi: 10.1016/j.fertnstert.2012.03.007

Robinson, P. C., Taylor, W. J., & Merriman, T. R. (2012). A systematic review of the prevalence of gout and hyperuricemia in Australia. Internal Medicine Journal, 42(9), 997-1007. doi: 10.1111/j.1445-5994.2012.02794.x

Bernhardt, H. S., & Tate, W. P. (2012). Primordial soup or vinaigrette: Did the RNA world evolve at acidic pH? Biology Direct, 7(4). doi: 10.1186/1745-6150-7-4

McKinney, C., & Merriman, T. R. (2012). Meta-analysis confirms a role for deletion in FCGR3B in autoimmune phenotypes. Human Molecular Genetics, 21(10), 2370-2376. doi: 10.1093/hmg/dds039

Tyndall, J. D. A., Lue, H., Rutledge, M. T., Bernhagen, J., Hampton, M. B., & Wilbanks, S. M. (2012). Macrophage migration inhibitory factor covalently complexed with phenethyl isothiocyanate. Acta Crystallographica Section F, 68(9), 999-1002. doi: 10.1107/s1744309112030552

Rodger, E. J., Suetani, R. J., Jones, G. T., Kleffmann, T., Carne, A., Legge, M., & McCormick, S. P. A. (2012). Proteomic analysis of aortae from human lipoprotein(a) transgenic mice shows an early metabolic response independent of atherosclerosis. PLoS ONE, 7(1), e30383. doi: 10.1371/journal.pone.0030383

Ryan, M. M., Ryan, B., Kyrke-Smith, M., Logan, B., Tate, W. P., Abraham, W. C., & Williams, J. M. (2012). Temporal profiling of gene networks associated with the late phase of long-term potentiation in vivo. PLoS ONE, 7(7), e40538. doi: 10.1371/journal.pone.0040538

Caldon, C. E., Sergio, C. M., Kang, J., Muthukaruppan, A., Boersma, M. N., Stone, A., … Black, M. A., … Musgrove, E. A. (2012). Cyclin E2 overexpression is associated with endocrine resistance but not insensitivity to CDK2 inhibition in human breast cancer cells. Molecular Cancer Therapeutics, 11(7), 1488-1499. doi: 10.1158/1535-7163.mct-11-0963

Jensen, B. P., Chin, P. K. L., Roberts, R. L., & Begg, E. J. (2012). Influence of adult age on the total and free clearance and protein binding of (R)- and (S)-warfarin. British Journal of Clinical Pharmacology, 74(5), 797-805. doi: 10.1111/j.1365-2125.2012.04259.x

Van de Putte, A. P., Janko, K., Kasparova, E., Maes, G. E., Rock, J., Koubbi, P., … Marshall, C. (2012). Comparative phylogeography of three trematomid fishes reveals contrasting genetic structure patterns in benthic and pelagic species. Marine Genomics, 8, 23-34. doi: 10.1016/j.margen.2012.05.002

Stephenson, W. J., Kirk, R. M., Kennedy, D. M., Finlayson, B. L., & Chen, Z. (2012). Long term shore platform surface lowering rates: Revisiting Gill and Lang after 32 years. Marine Geology, 299–302, 90-95. doi: 10.1016/j.margeo.2012.01.005

Pilbrow, A. P., Folkersen, L., Pearson, J. F., Brown, C. M., McNoe, L., Wang, N. M., … Black, M. A., Troughton, R. W., Richards, A. M., … Cameron, V. A. (2012). The chromosome 9p21.3 coronary heart disease risk allele is associated with altered gene expression in normal heart and vascular tissues. PLoS ONE, 7(6), e39574. doi: 10.1371/journal.pone.0039574

Debono, R., Topless, R., Markie, D., Black, M. A., & Merriman, T. R. (2012). Analysis of the DISC1 translocation partner (11q14.3) in genetic risk of schizophrenia. Genes, Brain & Behavior, 11(7), 859-963. doi: 10.1111/j.1601-183X.2012.00832.x

Chua, J. P. S., Wallace, E. J. S., Yardley, J. A., Duncan, E. J., Dearden, P. K., & Summerfield, T. C. (2012). Gene expression indicates a zone of heterocyst differentiation within the thallus of the cyanolichen Pseudocyphellaria crocata. New Phytologist, 196(3), 862-872. doi: 10.1111/j.1469-8137.2012.04272.x

Lim, S. S., Vos, T., Flaxman, A. D., Danaei, G., Shibuya, K., Adair-Rohani, H., … Grainger, R., … Merriman, T. R., … Ezzati, M. (2012). A comparative risk assessment of burden of disease and injury attributable to 67 risk factors and risk factor clusters in 21 regions, 1990-2010: A systematic analysis for the Global Burden of Disease Study 2010. Lancet, 380(9859), 2224-2260. doi: 10.1016/S0140-6736(12)61766-8

Murray, C. J. L., Vos, T., Lozano, R., Naghavi, M., Flaxman, A. D., Michaud, C., … Derrett, S., … Grainger, R., … Merriman, T. R., … Taylor, W. J., … Thomson, W. M., … Lopez, A. D. (2012). Disability-adjusted life years (DALYs) for 291 diseases and injuries in 21 regions, 1990-2010: A systematic analysis for the Global Burden of Disease Study 2010. Lancet, 380(9859), 2197-2223. doi: 10.1016/S0140-6736(12)61689-4

Sorrenson, B., Suetani, R. J., Bickley, V. M., George, P. M., Williams, M. J. A., Scott, R. S., & McCormick, S. P. A. (2011). An ABCA1 truncation shows no dominant negative effect in a familial hypoalphalipoproteinemia pedigree with three ABCA1 mutations. Biochemical & Biophysical Research Communications, 409(3), 400-405. doi: 10.1016/j.bbrc.2011.05.006

Meredith-Jones, K., Waters, D., Legge, M., & Jones, L. (2011). Upright water-based exercise to improve cardiovascular and metabolic health: A qualitative review. Complementary Therapies in Medicine, 19(2), 93-103. doi: 10.1016/j.ctim.2011.02.002

Janko, K., Marshall, C., Musilová, Z., Van Houdt, J., Couloux, A., Cruaud, C., & Lecointre, G. (2011). Multilocus analyses of an Antarctic fish species flock (Teleostei, Notothenioidei, Trematominae): Phylogenetic approach and test of the early-radiation event. Molecular Phylogenetics & Evolution, 60(3), 305-316. doi: 10.1016/j.ympev.2011.03.008

Wong, C. K., Young, V. L., Kleffmann, T., & Ward, V. K. (2011). Genomic and proteomic analysis of invertebrate iridovirus type 9. Journal of Virology, 85(15), 7900-7911. doi: 10.1128/jvi.00645-11

McCowan, L. M. E., North, R. A., Kho, E. M., Black, M. A., Chan, E. H. Y., & Dekker, G. A. (2011). Paternal contribution to small for gestational age babies: A multicenter prospective study. Obesity, 19(5), 1035-1039. doi: 10.1038/oby.2010.279

Fagerlund, R. D., & Eaton-Rye, J. J. (2011). The lipoproteins of cyanobacterial photosystem II. Journal of Photochemistry & Photobiology B, 104(1-2), 191-203. doi: 10.1016/j.jphotobiol.2011.01.022

Yeoh, C. C., Balcerowicz, M., Laurie, R., Macknight, R., & Putterill, J. (2011). Developing a method for customized induction of flowering. BMC Biotechnology, 11, 36. doi: 10.1186/1472-6750-11-36

Upritchard, H. G., Yang, J., Bremer, P. J., Lamont, I. L., & McQuillan, A. J. (2011). Adsorption of enterobactin to metal oxides and the role of siderophores in bacterial adhesion to metals. Langmuir, 27(17), 10587-10596. doi: 10.1021/la202352j

North, R. A., McCowan, L. M. E., Dekker, G. A., Poston, L., Chan, E. H. Y., Stewart, A. W., Black, M. A., … Kenny, L. C. (2011). Clinical risk prediction for pre-eclampsia in nulliparous women: Development of model in international prospective cohort. BMJ, 342, d1875. doi: 10.1136/bmj.d1875

Suetani, R. J., Sorrenson, B., Tyndall, J. D. A., Williams, M. J. A., & McCormick, S. P. A. (2011). Homology modeling and functional testing of an ABCA1 mutation causing Tangier disease. Atherosclerosis, 218(2), 404-410. doi: 10.1016/j.atherosclerosis.2011.06.019

Hollis-Moffatt, J. E., Gow, P. J., Harrison, A. A., Highton, J., Jones, P. B. B., Stamp, L. K., … Merriman, T. R. (2011). The SLC2A9 nonsynonymous Arg265His variant and gout: Evidence for a population-specific effect on severity. Arthritis Research & Therapy, 13(3), R85. doi: 10.1186/ar3356

Smith, R. A., & Murphy, M. P. (2011). Mitochondria-targeted antioxidants as therapies. Discovery Medicine, 11(57), 106-114.

Ehimen, E. A., Sun, Z. F., Carrington, C. G., Birch, E. J., & Eaton-Rye, J. J. (2011). Anaerobic digestion of microalgae residues resulting from the biodiesel production process. Applied Energy, 88(10), 3454-3463. doi: 10.1016/j.apenergy.2010.10.020

Legge, M., Jones, L. M., & McLeod, B. J. (2011). Energy substrate utilization in the common brushtailed possum (Trichosurus vulpecula) using intravenous tolerance tests. Comparative Biochemistry & Physiology Part B, 158(2), 132-135. doi: 10.1016/j.cbpb.2010.10.007

Ryan, M. M., Mason-Parker, S. E., Tate, W. P., Abraham, W. C., & Williams, J. M. (2011). Rapidly induced gene networks following induction of long-term potentiation at perforant path synapses in vivo. Hippocampus, 21(5), 541-553. doi: 10.1002/hipo.20770

Roberts, R. L., Hollis-Moffatt, J. E., Gómez-García, M., Fransen, K., Ponsioen, C. Y., Crusius, B. A., … Merriman, T. R., Barclay, M. L., Gearry, R. B., & Alizadeh, B. Z. (2011). Association of the protein-tyrosine phosphatase nonreceptor type substrate 1 (PTPNS1) gene with inflammatory bowel disease. Inflammatory Bowel Diseases, 17(2), E19-E21. doi: 10.1002/ibd.21470

Cochemé, H. M., Quin, C., McQuaker, S. J., Cabreiro, F., Logan, A., Prime, T. A., … Porteous, C. M., Smith, R. A. J., … Murphy, M. P. (2011). Measurement of H2O2 within living drosophila during aging using a ratiometric mass spectrometry probe targeted to the mitochondrial matrix. Cell Metabolism, 13(3), 340-350. doi: 10.1016/j.cmet.2011.02.003

Seed, P. T., Chappell, L. C., Black, M. A., Poppe, K. K., Hwang, Y.-C., Kasabov, N., … North, R. A. (2011). Prediction of preeclampsia and delivery of small for gestational age babies based on a combination of clinical risk factors in high-risk women. Hypertension in Pregnancy, 30(1), 58-73. doi: 10.3109/10641955.2010.486460

Glubb, D. M., Gearry, R. B., Barclay, M. L., Roberts, R. L., Pearson, J., Keenan, J. I., McKenzie, J., & Bentley, R. W. (2011). NOD2 and ATG16L1 polymorphisms affect monocyte responses in Crohn's disease. World Journal of Gastroenterology, 17(23), 2829-2837. doi: 10.3748/wjg.v17.i23.2829

Day, R. C., & Beck, C. W. (2011). Transdifferentiation from cornea to lens in Xenopus laevis depends on BMP signalling and involves upregulation of Wnt signalling. BMC Developmental Biology, 11, 54. doi: 10.1186/1471-213x-11-54

Chen, X. S., Penny, D., & Collins, L. J. (2011). Characterization of RNase MRP RNA and novel snoRNAs from Giardia intestinalis and Trichomonas vaginalis. BMC Genomics, 12, 550. doi: 10.1186/1471-2164-12-550

Nagai, S., Felipe Alves, C. A., Kobayashi, M., & Ikeda, M. (2011). Comparative transient expression assay analysis of hycu-hr6- and IE1-dependent regulation of baculovirus gp64 early promoters in three insect cell lines. Virus Research, 155(1), 83-90. doi: 10.1016/j.virusres.2010.08.025

Dottori, M., Tay, C., & Hughes, S. M. (2011). Neural development in human embryonic stem cells—Applications of lentiviral vectors. Journal of Cellular Biochemistry, 112(8), 1955-1962. doi: 10.1002/jcb.23116

Baldwin, S. J., Dodds, K. G., Auvray, B., Genet, R. A., Macknight, R. C., & Jacobs, J. M. E. (2011). Association mapping of cold-induced sweetening in potato using historical phenotypic data. Annals of Applied Biology, 158(3), 248-256. doi: 10.1111/j.1744-7348.2011.00459.x

Lopez, J., John, S. W., Tenev, T., Rautureau, G. J. P., Hinds, M. G., Francalanci, F., … Day, C. L., & Meier, P. (2011). CARD-mediated autoinhibition of cIAP1's E3 ligase activity suppresses cell proliferation and migration. Molecular Cell, 42(5), 569-583. doi: 10.1016/j.molcel.2011.04.008

Morgan, N. V., Goddard, S., Cardno, T. S., McDonald, D., Rahman, F., Barge, D., Ciupek, A., … Tate, W. P., … Maher, E. R. (2011). Mutation in the TCRα subunit constant gene (TRAC) leads to a human immunodeficiency disorder characterized by a lack of TCRαβ+ T cells. Journal of Clinical Investigation, 121(2), 695-702. doi: 10.1172/JCI41931

Siakkou, E., Rutledge, M. T., Wilbanks, S. M., & Jameson, G. N. L. (2011). Correlating crosslink formation with enzymatic activity in cysteine dioxygenase. Biochimica et Biophysica Acta: Proteins & Proteomics, 1814, 2003-2009. doi: 10.1016/j.bbapap.2011.07.019

Kemp, R. A., Black, M. A., McCall, J., Yoon, H.-S., Phillips, V., Anjomshoaa, A., & Reeve, A. E. (2011). T cell subpopulations in lymph nodes may not be predictive of patient outcome in colorectal cancer. Journal of Experimental & Clinical Cancer Research, 30, 78. doi: 10.1186/1756-9966-30-78

Soon, W. W., Miller, L. D., Black, M. A., Dalmasso, C., Chan, X. B., Pang, B., … Liu, E. T. (2011). Combined genomic and phenotype screening reveals secretory factor SPINK1 as an invasion and survival factor associated with patient prognosis in breast cancer. EMBO Molecular Medicine, 3(8), 451-464. doi: 10.1002/emmm.201100150

Ghazoui, Z., Buffa, F. M., Dunbier, A. K., Anderson, H., Dexter, T., Detre, S., … Dowsett, M. (2011). Close and stable relationship between proliferation and a hypoxia metagene in aromatase inhibitor-treated ER-positive breast cancer. Clinical Cancer Research, 17(9), 3005-3012. doi: 10.1158/1078-0432.ccr-10-1704

Dunbier, A. K., Martin, L.-A., & Dowsett, M. (2011). New and translational perspectives of oestrogen deprivation in breast cancer. Molecular & Cellular Endocrinology, 340(2), 137-141. doi: 10.1016/j.mce.2010.12.034

Draper, R. C., Martin, L. W., Beare, P. A., & Lamont, I. L. (2011). Differential proteolysis of sigma regulators controls cell-surface signaling in Pseudomonas aeruginosa. Molecular Microbiology, 82(6), 1444-1453. doi: 10.1111/j.1365-2958.2011.07901.x

Lønning, P. E., Haynes, B. P., Straume, A. H., Dunbier, A., Helle, H., Knappskog, S., & Dowsett, M. (2011). Exploring breast cancer estrogen disposition: The basis for endocrine manipulation. Clinical Cancer Research, 17(15), 4948-4958. doi: 10.1158/1078-0432.ccr-11-0043

Hook, S. M., Phipps-Green, A. J., Faiz, F., McNoe, L., McKinney, C., Hollis-Moffatt, J. E., & Merriman, T. R. (2011). Smad2: A candidate gene for the murine autoimmune diabetes locus Idd21.1. Journal of Clinical Endocrinology & Metabolism, 96(12), E2072-E2077. doi: 10.1210/jc.2011-0463

Donaldson, A. E., Walker, N. K., Lamont, I. L., Cordiner, S. J., & Taylor, M. C. (2011). Characterising the dynamics of expirated bloodstain pattern formation using high-speed digital video imaging. International Journal of Legal Medicine, 125, 757-762. doi: 10.1007/s00414-010-0498-5

Borg, M., Brownfield, L., Khatab, H., Sidorova, A., Lingaya, M., & Twell, D. (2011). The R2R3 MYB transcription factor DUO1 activates a male germline-specific regulon essential for sperm cell differentiation in Arabidopsis. Plant Cell, 23(2), 534-549. doi: 10.1105/tpc.110.081059

Park, S. J., Kleffmann, T., & Hessian, P. A. (2011). The G82S polymorphism promotes glycosylation of the receptor for advanced glycation end products (RAGE) at Asn81: A comparison of wild-type RAGE with the G82S polymorphic variant. Journal of Biological Chemistry, 286(24), 21384-21392. doi: 10.1074/jbc.M111.241281

Dickerhof, N., Kleffmann, T., Jack, R., & McCormick, S. (2011). Bacitracin inhibits the reductive activity of protein disulfide isomerase by disulfide bond formation with free cysteines in the substrate-binding domain. FEBS Journal, 278(12), 2034-2043. doi: 10.1111/j.1742-4658.2011.08119.x

Merriman, T. R., & Dalbeth, N. (2011). Genetic and environmental risk factors in hyperuricaemia and common gout. Current Rheumatology Reviews, 7(2), 114-122. doi: 10.2174/157339711795305013

Dunbier, A. K., Anderson, H., Ghazoui, Z., Salter, J., Parker, J. S., Perou, C. M., … Dowsett, M. (2011). Association between breast cancer subtypes and response to neoadjuvant anastrozole. Steroids, 76(8), 736-740. doi: 10.1016/j.steroids.2011.02.025

Kafka, A. P., Kleffmann, T., Rades, T., & McDowell, A. (2011). The application of MALDI TOF MS in biopharmaceutical research. International Journal of Pharmaceutics, 417(1-2), 70-82. doi: 10.1016/j.ijpharm.2010.12.010

Herridge, R. P., Day, R. C., Baldwin, S., & Macknight, R. C. (2011). Rapid analysis of seed size in Arabidopsis for mutant and QTL discovery. Plant Methods, 7. doi: 10.1186/1746-4811-7-3

Brownfield, L., & Köhler, C. (2011). Unreduced gamete formation in plants: Mechanisms and prospects. Journal of Experimental Botany, 62(5), 1659-1668. doi: 10.1093/jxb/erq371

Lønning, P. E., Haynes, B. P., Straume, A. H., Dunbier, A., Helle, H., Knappskog, S., & Dowsett, M. (2011). Recent data on intratumor estrogens in breast cancer. Steroids, 76(8), 786-791. doi: 10.1016/j.steroids.2011.02.040

Diaz-Gallo, L.-M., Espino-Paisán, L., Fransen, K., Gómez-García, M., van Sommeren, S., Cardeña, C., … Barclay, M. L., … Gearry, R. B., Roberts, R. L., … Merriman, T. R., … Martin, J. (2011). Differential association of two PTPN22 coding variants with Crohn's disease and ulcerative colitis. Inflammatory Bowel Diseases, 17(11), 2287-2294. doi: 10.1002/ibd.21630

Burut-Archanai, S., Eaton-Rye, J. J., & Incharoensakdi, A. (2011). Na+-stimulated phosphate uptake system in Synechocystis sp. PCC 6803 with Pst1 as a main transporter. BMC Microbiology, 11, 225. doi: 10.1186/1471-2180-11-225

Martin, L.-A., Ghazoui, Z., Weigel, M. T., Pancholi, S., Dunbier, A., Johnston, S., & Dowsett, M. (2011). An in vitro model showing adaptation to long-term oestrogen deprivation highlights the clinical potential for targeting kinase pathways in combination with aromatase inhibition. Steroids, 76, 772-776. doi: 10.1016/j.steroids.2011.02.035

Linterman, K. S., Palmer, D. N., Kay, G. W., Barry, L. A., Mitchell, N. L., McFarlane, R. G., Black, M. A., … Hughes, S. M. (2011). Lentiviral-mediated gene transfer to the sheep brain: Implications for gene therapy in Batten disease. Human Gene Therapy, 22(8), 1011-1020. doi: 10.1089/hum.2011.026

Rossin, E. J., Lage, K., Raychaudhuri, S., Xavier, R. J., Tatar, D., Benita, Y., International Inflammatory Bowel Disease Genetics Constortium, including Roberts, R., Barclay, M., Gearry, R., … Daly, M. J. (2011). Proteins encoded in genomic regions associated with immune-mediated disease physically interact and suggest underlying biology. PLoS Genetics, 7(1), e1001273. doi: 10.1371/journal.pgen.1001273

Lee, W., Luckner, S. R., Kisker, C., Tonge, P. J., & Engels, B. (2011). Elucidation of the protonation states of the catalytic residues in mtKasA: Implications for inhibitor design. Biochemistry, 50(25), 5743-5756. doi: 10.1021/bi200006t

Dowsett, M., Smith, I., Robertson, J., Robison, L., Pinhel, I., Johnson, L., … Dunbier, A., … Bliss, J. (2011). Endocrine therapy, new biologicals, and new study designs for presurgical studies in breast cancer. Journal of the National Cancer Institute Monographs, 43, 120-123. doi: 10.1093/jncimonographs/lgr034

Anthony, K. G., Strych, U., Yeung, K. R., Shoen, C. S., Perez, O., Krause, K. L., … Koski, R. A. (2011). New classes of alanine racemase inhibitors identified by high-throughput screening show antimicrobial activity against Mycobacterium tuberculosis. PLoS ONE, 6(5), e20374. doi: 10.1371/journal.pone.0020374

Kalamorz, F., Keis, S., McMillan, D. G. G., Olsson, K., Stanton, J.-A., Stockwell, P., Black, M. A., … Cook, G. M. (2011). Draft genome sequence of the thermoalkaliphilic Caldalkalibacillus thermarum strain TA2.A1. Journal of Bacteriology, 193(16), 4290-4291. doi: 10.1128/jb.05035-11

Wilson, M. J., & Dearden, P. K. (2011). Diversity in insect axis formation: Two orthodenticle genes and hunchback act in anterior patterning and influence dorsoventral organization in the honeybee (Apis mellifera). Development, 138(16), 3497-3507. doi: 10.1242/dev.067926

Laurie, R. E., Diwadkar, P., Jaudal, M., Zhang, L., Hecht, V., Wen, J., … Macknight, R. C. (2011). The Medicago FLOWERING LOCUS T homolog, MtFTa1, is a key regulator of flowering time. Plant Physiology, 156(4), 2207-2224. doi: 10.1104/pp.111.180182

Nagarajan, A., Winter, R., Eaton-Rye, J., & Burnap, R. (2011). A synthetic DNA and fusion PCR approach to the ectopic expression of high levels of the D1 protein of photosystem II in Synechocystis sp. PCC 6803. Journal of Photochemistry & Photobiology B, 104(1-2), 212-219. doi: 10.1016/j.jphotobiol.2011.02.009

Feltham, R., Bettjeman, B., Budhidarmo, R., Mace, P. D., Shirley, S., Condon, S. M., … Day, C. L. (2011). Smac mimetics activate the E3 ligase activity of cIAP1 protein by promoting RING domain dimerization. Journal of Biological Chemistry, 286(19), 17015-17028. doi: 10.1074/jbc.M111.222919

Im, H., Sharpe, M. L., Strych, U., Davlieva, M., & Krause, K. L. (2011). The crystal structure of alanine racemase from Streptococcus pneumoniae, a target for structure-based drug design. BMC Microbiology, 11, 116. doi: 10.1186/1471-2180-11-116

Nixon, G., Blattner, K., Dawson, J., Dovey, S., Black, M. A., Wilkins, G., Dunn, A. C., & McLellan, A. D. (2011). Streptokinase antibodies in patients presenting with acute coronary syndrome in three rural New Zealand populations. Journal of Clinical Pathology, 64, 426-429. doi: 10.1136/jcp.2010.085837

von Zychlinski, A., Kleffmann, T., Williams, M. J. A., & McCormick, S. P. (2011). Proteomics of Lipoprotein(a) identifies a protein complement associated with response to wounding. Journal of Proteomics, 74, 2881-2891. doi: 10.1016/j.jprot.2011.07.008

Dunbier, A. K., Anderson, H., Ghazoui, Z., Lopez-Knowles, E., Pancholi, S., Ribas, R., … Dowsett, M. (2011). ESR1 is co-expressed with closely adjacent uncharacterised genes spanning a breast cancer susceptibility locus at 6q25.1. PLoS Genetics, 7(4), e1001382. doi: 10.1371/journal.pgen.1001382

Miller, T. W., Balko, J. M., Fox, E. M., Ghazoui, Z., Dunbier, A., Anderson, H., … Arteaga, C. L. (2011). ERα-dependent E2F transcription can mediate resistance to estrogen deprivation in human breast cancer. Cancer Discovery, 1, 338-351. doi: 10.1158/2159-8290.CD-11-0101

Merriman, T. R., & Dalbeth, N. (2011). The genetic basis of hyperuricaemia and gout. Joint Bone Spine, 78(1), 35-40. doi: 10.1016/j.jbspin.2010.02.027

Stevens, S. G., Gardner, P. P., & Brown, C. (2011). Two covariance models for iron-responsive elements. RNA Biology, 8(5), 792-801. doi: 10.4161/rna.8.5.16037

Bordé, E. C., Ouzegdouh, Y., Ledgerwood, E. C., & Morison, I. M. (2011). Congenital thrombocytopenia and cytochrome c mutation: A matter of birth and death. Seminars in Thrombosis & Hemostasis, 37(6), 664-672. doi: 10.1055/s-0031-1291376

Nair, A. (2011). Decision making mechanism influences the regulatory function of Notch in apoptosis. Journal of Cell & Molecular Biology, 9(1), 1-4.

Chand, A., & Legge, M. (2011). Stereological assessment of developing mouse ovarian follicles in an in vitro culture system. Anatomical Record, 294(3), 379-383. doi: 10.1002/ar.21328

Wilson, M. J., Abbott, H., & Dearden, P. K. (2011). The evolution of oocyte patterning in insects: Multiple cell-signaling pathways are active during honeybee oogenesis and are likely to play a role in axis patterning. Evolution & Development, 13(2), 127-137. doi: 10.1111/j.1525-142X.2011.00463.x

Hecht, V., Laurie, R. E., Vander Schoor, J. K., Ridge, S., Knowles, C. L., Chee Liew, L., … Macknight, R. C., & Weller, J. L. (2011). The pea GIGAS gene is a FLOWERING LOCUS T homolog necessary for graft-transmissible specification of flowering but not for responsiveness to photoperiod. Plant Cell, 23(1), 147-161. doi: 10.1105/tpc.110.081042

Merriman, T. R. (2011). Population heterogeneity in the genetic control of serum urate. Seminars in Nephrology, 31(5), 420-425. doi: 10.1016/j.semnephrol.2011.08.005

Miller, L. D., Coffman, L. G., Chou, J. W., Black, M. A., Bergh, J., Agostino, Jr, R. D., … Torti, F. M. (2011). An iron regulatory gene signature predicts outcome in breast cancer. Cancer Research, 71(21), 6728-6737. doi: 10.1158/0008-5472.can-11-1870

Martin, L. W., Reid, D. W., Sharples, K. J., & Lamont, I. L. (2011). Pseudomonas siderophores in the sputum of patients with cystic fibrosis. Biometals, 24(6), 1059-1067. doi: 10.1007/s10534-011-9464-z

Miller, T. W., Balko, J. M., Ghazoui, Z., Dunbier, A., Anderson, H., Dowsett, M., … Arteaga, C. L. (2011). A gene expression signature from human breast cancer cells with acquired hormone independence identifies MYC as a mediator of antiestrogen resistance. Clinical Cancer Research, 17(7), 2024-2034. doi: 10.1158/1078-0432.ccr-10-2567

Bird, S. D., Legge, M., & Walker, R. J. (2011). Thiols stabilize cobblestone morphology of cultured mesothelial cells. Cell Biology International, 35(8), 857-867. doi: 10.1042/CBI20100593

Rodríguez-Rodríguez, L., Wan Taib, W. R., Topless, R., Steer, S., González-Escribano, M. F., Balsa, A., … Merriman, T. R., & Martin, J. (2011). The PTPN22 R263Q polymorphism is a risk factor for rheumatoid arthritis in Caucasian case-control samples. Arthritis & Rheumatism, 63(2), 365-372. doi: 10.1002/art.30145

Chand, A. L., & Legge, M. (2011). Amino acid transport system L activity in developing mouse ovarian follicles. Human Reproduction, 26(11), 3102-3108. doi: 10.1093/humrep/der298

Stamp, L. K., & Roberts, R. L. (2011). Effect of genetic polymorphisms in the folate pathway on methotrexate therapy in rheumatic diseases. Pharmacogenomics, 12(10), 1449-1463. doi: 10.2217/pgs.11.86

Hawes, T. C., Marshall, C. J., & Wharton, D. A. (2011). Antifreeze proteins in the Antarctic springtail, Gressittacantha terranova. Journal of Comparative Physiology B, 181(6), 713-719. doi: 10.1007/s00360-011-0564-4

Liptak, M. D., Fagerlund, R. D., Ledgerwood, E. C., Wilbanks, S. M., & Bren, K. (2011). The proapoptotic G41S mutation to human cytochrome c alters the heme electronic structure and increases the electron self-exchange rate. Journal of the American Chemical Society, 133(5), 1153-1155. doi: 10.1021/ja106328k

Panjaworayan, N., & Brown, C. M. (2011). Effects of HBV genetic variability on RNAi strategies. Hepatitis Research & Treatment, 2011, 367908. doi: 10.1155/2011/367908

Roberts, R. L., van Rij, A. M., Phillips, L. V., Young, S., McCormick, S. P. A., Merriman, T. R., & Jones, G. T. (2011). Interaction of the inflammasome genes CARD8 and NLRP3 in abdominal aortic aneurysms. Atherosclerosis, 218(1), 123-126. doi: 10.1016/j.atherosclerosis.2011.04.043

Sowerby, S. J., Mirams, G. J., Hill, P. C., & Paulin, M. G. (2011). An axisymmetric meniscus converges particles for microscopy. Journal of Microscopy, 244(3), 230-234. doi: 10.1111/j.1365-2818.2011.03527.x

Anderson, C. A., Boucher, G., Lees, C. W., Franke, A., D’Amato, M., Taylor, K. D., … Barclay, M., … Roberts, R., … Gearry, R., … Rioux, J. D. (2011). Meta-analysis identifies 29 additional ulcerative colitis risk loci, increasing the number of confirmed associations to 47. Nature Genetics, 43(3), 246-254. doi: 10.1038/ng.764

Siakkou, E., Wilbanks, S. M., & Jameson, G. N. L. (2010). Simplified cysteine dioxygenase activity assay allows simultaneous quantitation of both substrate and product. Analytical Biochemistry, 405(1), 127-131. doi: 10.1016/j.ab.2010.06.013

Nelson, W. A., & Broom, J. E. S. (2010). The identity of Porphyra columbina (Bangiales, Rhodophyta) originally described from the New Zealand subantarctic islands. Australian Systematic Botany, 23(1), 16-26. doi: 10.1071/sb09032

Broom, J. E. S., Nelson, W. A., Farr, T. J., Phillips, L., & Clayton, M. (2010). Relationships of the Porphyra (Bangiales, Rhodophyta) flora of the Falkland Islands: A molecular survey using rbcL and nSSU sequence data. Australian Systematic Botany, 23(1), 27-37. doi: 10.1071/sb09033

Wan Taib, W. R., Smyth, D. J., Merriman, M. E., Dalbeth, N., Gow, P. J., Harrison, A. A., Highton, J., … Stamp, L., … Merriman, T. R. (2010). The PTPN22 locus and rheumatoid arthritis: No evidence for an effect on risk independent of Arg620Trp. PLoS ONE, 5(10), e13544. doi: 10.1371/journal.pone.0013544

Milev, M. P., Brown, C. M., & Mouland, A. J. (2010). Live cell visualization of the interactions between HIV-1 Gag and the cellular RNA-binding protein Staufen1. Retrovirology, 7, 41. doi: 10.1186/1742-4690-7-41

Ghosh, A., Ali, M. A., Selvanesan, L., & Dias, G. J. (2010). Structure-function characteristics of the biomaterials based on milk-derived proteins. International Journal of Biological Macromolecules, 46, 404-411. doi: 10.1016/j.ijbiomac.2010.02.011

Stamp, L. K., Chapman, P. T., O'Donnell, J. L., Zhang, M., James, J., Frampton, C., Barclay, M. L., Kennedy, M. A., & Roberts, R. L. (2010). Polymorphisms within the folate pathway predict folate concentrations but are not associated with disease activity in rheumatoid arthritis patients on methotrexate. Pharmacogenetics & Genomics, 20(6), 367-376. doi: 10.1097/FPC.0b013e3283398a71

Ariazi, E. A., Brailoiu, E., Yerrum, S., Shupp, H. A., Slifker, M. J., Cunliffe, H. E., Black, M. A., … Jordan, V. C. (2010). The G protein-coupled receptor GPR30 inhibits proliferation of estrogen receptor-positive breast cancer cells. Cancer Research, 70(3), 1184-1194. doi: 10.1158/0008-5472.CAN-09-3068

Risk, J. M., Laurie, R. E., Macknight, R. C., & Day, C. L. (2010). FRIGIDA and related proteins have a conserved central domain and family specific N- and C- terminal regions that are functionally important. Plant Molecular Biology, 73, 493-505. doi: 10.1007/s11103-010-9635-2

Young, D. J., Edgar, C. D., Murphy, J., Fredebohm, J., Poole, E. S., & Tate, W. P. (2010). Bioinformatic, structural, and functional analyses support release factor-like MTRF1 as a protein able to decode nonstandard stop codons beginning with adenine in vertebrate mitochondria. RNA, 16(6), 1146-1155. doi: 10.1261/rna.1970310

Bentley, R. W., Cleynen, I., Gearry, R. B., Barclay, M. L., Rutgeerts, P., Merriman, T. R., … Roberts, R. L., & Vermeire, S. (2010). Evidence that glioma-associated oncogene homolog 1 is not a universal risk gene for inflammatory bowel disease in Caucasians. Genes & Immunity, 11, 509-514. doi: 10.1038/gene.2010.15

Crump, R. J., Fitzgerald, R. P., & Legge, M. (2010). 'Going-to-have-cancerness': A study of living with increased risk of BRCA1 and BRCA2 mutations for six South Island women. Journal of Primary Health Care, 2(4), 311-317. doi: 10.1071/HC10311

Donaldson, A., Taylor, M. C., Cordiner, S. J., & Lamont, I. L. (2010). Using oral microbial DNA analysis to identify expirated bloodspatter. International Journal of Legal Medicine, 124(6), 569-576. doi: 10.1007/s00414-010-0426-8

Fenby, N., Pu, H., Pennell, R., Praekelt, U., Day, R., & Scott, R. (2010). An uncoupling screen for autonomous embryo mutants in Arabidopsis thaliana. Sexual Plant Reproduction, 23, 255-264. doi: 10.1007/s00497-010-0142-z

Bentley, R. W., Pearson, J., Gearry, R. B., Barclay, M. L., McKinney, C., Merriman, T. R., & Roberts, R. L. (2010). Association of higher DEFB4 genomic copy number with Crohn's disease. American Journal of Gastroenterology, 105(2), 354-359. doi: 10.1038/ajg.2009.582

Guilford, P., Humar, B., & Blair, V. (2010). Hereditary diffuse gastric cancer: Translation of CDH1 germline mutations into clinical practice. Gastric Cancer, 13(1), 1-10. doi: 10.1007/s10120-009-0531-x

Ting, Y. T., Coates, T. P., Marti, H. P., Dunn, A. C., Parker, R. M., Pickering, J. W., Jack, R. W., Kemp, R. A., Walker, R. J., & McLellan, A. D. (2010). Urinary soluble HLA-DR is a potential biomarker for acute renal transplant rejection. Transplantation, 89(9), 1071-1078. doi: 10.1097/TP.0b013e3181d15492

Siriwardena, M., Kleffmann, T., Ruygrok, P., Cameron, V. A., Yandle, T. G., Nicholls, M. G., Richards, A. M., & Pemberton, C. J. (2010). B-type natriuretic peptide signal peptide circulates in human blood. Evaluation as a potential biomarker of cardiac ischemia. Circulation, 122, 255-264. doi: 10.1161/CIRCULATIONAHA.109.909937

Miller, C., Davlieva, M., Wilson, C., White, K. I., Couñago, R., & et al (2010). Experimental evolution of adenylate kinase reveals contrasting strategies toward protein thermostability. Biophysical Journal, 99(3), 887-896. doi: 10.1016/j.bpj.2010.04.076

Pedersen, T. X., McCormick, S. P., Tsimikas, S., Bro, S., & Nielsen, L. B. (2010). Lipoprotein(a) accelerates atherosclerosis in uremic mice. Journal of Lipid Research, 51(10), 2967-2975. doi: 10.1194/jlr.M006742

Yeterian, E., Martin, L. W., Lamont, I. L., & Schalk, I. J. (2010). An efflux pump is required for siderophore recycling by Pseudomonas aeruginosa. Environmental Microbiology Reports, 2(3), 412-418. doi: 10.1111/j.1758-2229.2009.00115.x

McKinney, C., Fanciulli, M., Merriman, M. E., Phipps-Green, A., Alizadeh, B. Z., Koeleman, B. P. C., … Harrison, A. A., Highton, J., … Stamp, L. K., … Merriman, T. R. (2010). Association of variation in Fcγ receptor 3B gene copy number with rheumatoid arthritis in Caucasian samples. Annals of the Rheumatic Diseases, 69, 1711-1716. doi: 10.1136/ard.2009.123588

Kikuchi, N., Arai, S., Yoshida, G., Shin, J.-A., Broom, J. E., Nelson, W. A., & Miyata, M. (2010). Porphyra migitae sp. nov. (Bangiales, Rhodophyta) from Japan. Phycologia, 49(4), 345-354. doi: 10.2216/09-82.1

Mace, P. D., Shirley, S., & Day, C. L. (2010). Assembling the building blocks: Structure and function of inhibitor of apoptosis proteins. Cell Death & Differentiation, 17, 46-53. doi: 10.1038/cdd.2009.45

Fitzgerald, R. C., Hardwick, R., Huntsman, D., Carneiro, F., Guilford, P., Blair, V., … on behalf of the International Gastric Cancer Linkage Consortium. (2010). Hereditary diffuse gastric cancer: Updated consensus guidelines for clinical management and directions for future research. Journal of Medical Genetics, 47(7), 436-444. doi: 10.1136/jmg.2009.074237

Mai, P. L., Friedlander, M., Tucker, K., Phillips, K.-A., Hogg, D., Jewett, M. A. S., … Guilford, P., … Greene, M. H. (2010). The International Testicular Cancer Linkage Consortium: A clinicopathologic descriptive analysis of 461 familial malignant testicular germ cell tumor kindred. Urologic Oncology, 28(5), 492-499. doi: 10.1016/j.urolonc.2008.10.004

Rhodes, J. M., Bentley, F. K., Print, C. G., Dorsett, D., Misulovin, Z., Dickinson, E. J., … Horsfield, J. A. (2010). Positive regulation of c-Myc by cohesin is direct, and evolutionarily conserved. Developmental Biology, 344, 637-649. doi: 10.1016/j.ydbio.2010.05.493

Luckner, S. R., Liu, N., am Ende, C. W., Tonge, P. J., & Kisker, C. (2010). A slow, tight binding inhibitor of InhA, the enoyl-acyl carrier protein reductase from Mycobacterium tuberculosis. Journal of Biological Chemistry, 285(19), 14330-14337. doi: 10.1074/jbc.M109.090373

Patrick, W. M., Nakatani, Y., Cutfield, S. M., Sharpe, M. L., Ramsay, R. J., & Cutfield, J. F. (2010). Carbohydrate binding sites in Candida albicans exo-β-1,3-glucanase and the role of the Phe-Phe 'clamp' at the active site entrance. FEBS Journal, 277, 4549-4561. doi: 10.1111/j.1742-4658.2010.07869.x

Wilson, M. J., Havler, M., & Dearden, P. K. (2010). Giant, Krüppel, and caudal act as gap genes with extensive roles in patterning the honeybee embryo. Developmental Biology, 339(1), 200-211. doi: 10.1016/j.ydbio.2009.12.015

Empson, R. M., Turner, P. R., Nagaraja, R. Y., Beesley, P. W., & Knöpfel, T. (2010). Reduced expression of the Ca2+ transporter protein PMCA2 slows Ca2+ dynamics in mouse cerebellar Purkinje neurons and alters the precision of motor coordination. Journal of Physiology, 588(6), 907-922. doi: 10.1113/jphysiol.2009.182196

Jackson, S. A., Fagerlund, R. D., Wilbanks, S. M., & Eaton-Rye, J. J. (2010). Crystal structure of PsbQ from Synechocystis sp. PCC 6803 at 1.8 Å: Implications for binding and function in cyanobacterial photosystem II. Biochemistry, 49(13), 2765-2767. doi: 10.1021/bi100217h

Nasri, S., Anjomshoaa, A., Song, S., Guilford, P., McNoe, L., Black, M., Phillips, V., Reeve, A., & Humar, B. (2010). Oligonucleotide array outperforms SNP array on formalin-fixed paraffin-embedded clinical samples. Cancer Genetics & Cytogenetics, 198(1), 1-6. doi: 10.1016/j.cancergencyto.2009.12.002

Hollis-Moffatt, J. E., Chen-Xu, M., Topless, R., Dalbeth, N., Gow, P. J., Harrison, A. A., Highton, J., … van Rij, A., Jones, G. T., Stamp, L. K., & Merriman, T. R. (2010). Only one independent genetic association with rheumatoid arthritis within the KIAA1109-TENR-IL2-IL21 locus in Caucasian sample sets: Confirmation of association of rs6822844 with rheumatoid arthritis at a genome-wide level of significance. Arthritis Research & Therapy, 12(3), R116. doi: 10.1186/ar3053

Roberts, R. L., Topless, R. K. G., Phipps-Green, A. J., Gearry, R. B., Barclay, M. L., & Merriman, T. R. (2010). Evidence of interaction of CARD8 rs2043211 with NALP3 rs35829419 in Crohn's disease. Genes & Immunity, 11, 351-356. doi: 10.1038/gene.2010.11

Nakatani, Y., Lamont, I. L., & Cutfield, J. F. (2010). Discovery and characterization of a distinctive exo-1,3/1,4-β-glucanase from the marine bacterium Pseudoalteromonas sp. strain BB1. Applied & Environmental Microbiology, 76(20), 6760-6768. doi: 10.1128/AEM.00758-10

Rautureau, G. J. P., Day, C. L., & Hinds, M. G. (2010). Intrinsically disordered proteins in Bcl-2 regulated apoptosis. International Journal of Molecular Sciences, 11(4), 1808-1824. doi: 10.3390/ijms11041808

Liew, C. W., Sun, H., Hunter, T., & Day, C. L. (2010). RING domain dimerization is essential for RNF4 function. Biochemical Journal, 431(1), 23-29. doi: 10.1042/BJ20100957

Rae-Whitcombe, S. M., Kennedy, D., Voyles, M., & Thompson, M. P. (2010). Regulation of the promoter region of the human adiponutrin/PNPLA3 gene by glucose and insulin. Biochemical & Biophysical Research Communications, 402(4), 767-772. doi: 10.1016/j.bbrc.2010.10.106

Weeks, R. J., Kees, U. R., Song, S., & Morison, I. M. (2010). Silencing of TESTIN by dense biallelic promoter methylation is the most common molecular event in childhood acute lymphoblastic leukaemia. Molecular Cancer, 9, 163. doi: 10.1186/1476-4598-9-163

McMillan, D. G. G., Velasquez, I., Nunn, B. L., Goodlett, D. R., Hunter, K. A., Lamont, I., Sander, S. G., & Cook, G. M. (2010). Acquisition of iron by alkaliphilic Bacillus species. Applied & Environmental Microbiology, 76(20), 6955-6961. doi: 10.1128/AEM.01393-10

Weersma, R. K., Crusius, J. B. A., Roberts, R. L., Koeleman, B. P. C., Palomino-Morales, R., Wolfkamp, S., Hollis-Moffatt, J. E., … Gearry, R. B., Barclay, M. L., … Merriman, T. R., … Alizadeh, B. Z. (2010). Association of FcgR2a, but not FcgR3a, with inflammatory bowel diseases across three Caucasian populations. Inflammatory Bowel Diseases, 16(12), 2080-2089. doi: 10.1002/ibd.21342

Manning, J. A., Shalini, S., Risk, J. M., Day, C. L., & Kumar, S. (2010). A direct interaction with NEDD1 regulates γ-tubulin recruitment to the centrosome. PLoS ONE, 5(3), e9618. doi: 10.1371/journal.pone.0009618

Kafka, A. P., Kleffmann, T., Rades, T., & McDowell, A. (2010). Characterization of peptide polymer interactions in poly(alkylcyanoacrylate) nanoparticles: A mass spectrometric approach. Current Drug Delivery, 7(3), 208-215.

Feltham, R., Moulin, M., Vince, J. E., Mace, P. D., Wong, W. W.-L., Anderton, H., Day, C. L., … Silke, J. (2010). Tumor necrosis factor (TNF) signaling, but not TWEAK (TNF-like weak inducer of apoptosis)-triggered cIAP1 (cellular inhibitor of apoptosis protein 1) degradation, requires cIAP1 RING dimerization and E2 binding. Journal of Biological Chemistry, 285(23), 17525-17536. doi: 10.1074/jbc.M109.087635

Tian, P., & Legge, M. (2010). Cryosolvent interaction with cellular actin using 3T3-LI cells as a model system. Cryobiology, 61(3), 357-359. doi: 10.1016/j.cryobiol.2010.09.008

Bahlo, M., Stankovich, J., Danoy, P., Hickey, P. F., Taylor, B. V., Browning, S. R., the Australian and New Zealand Multiple Sclerosis Genetics Consortium (ANZgene), … also Clarke, G., McCallum, R., Merriman, M., Merriman, T., & Mason, D. (2010). Saliva-derived DNA performs well in large-scale, high-density single-nucleotide polymorphism microarray studies. Cancer Epidemiology, Biomarkers & Prevention, 19(3), 794-798. doi: 10.1158/1055-9965.EPI-09-0812

Stuart, E. C., Jarvis, R. M., & Rosengren, R. J. (2010). In vitro mechanism of action for the cytotoxicity elicited by the combination of epigallocatechin gallate and raloxifene in MDA-MB-231 cells. Oncology Reports, 24(3), 779-785. doi: 10.3892/or_00000921

The International Aphid Genomics Consortium, including Smith, J., Wilson, M., Dearden, P., & Duncan, E. J. (2010). Genome sequence of the pea aphid Acyrthosiphon pisum. PLoS Biology, 8(2), e1000313. doi: 10.1371/journal.pbio.1000313

Shigenobu, S., Bickel, R. D., Brisson, J. A., Butts, T., Chang, C.-C., Christiaens, O., … Duncan, E. J., … Smith, J., … Wilson, M. J., Dearden, P. K., & Stern, D. L. (2010). Comprehensive survey of developmental genes in the pea aphid, Acyrthosiphon pisum: Frequent lineage-specific duplications and losses of developmental genes. Insect Molecular Biology, 19(Suppl. 2), 47-62. doi: 10.1111/j.1365-2583.2009.00944.x

Gerardo, N. M., Altincicek, B., Anselme, C., Atamian, H., Barribeau, S. M., de Vos, M., Duncan, E. J., … Vilcinskas, A. (2010). Immunity and other defenses in pea aphids, Acyrthosiphon pisum. Genome Biology, 11(2), R21. doi: 10.1186/gb-2010-11-2-r21

Mace, P. D., Smits, C., Vaux, D. L., Silke, J., & Day, C. L. (2010). Asymmetric recruitment of cIAPs by TRAF2. Journal of Molecular Biology, 400, 8-15. doi: 10.1016/j.jmb.2010.04.055

Porteous, C. M., Logan, A., Evans, C., Ledgerwood, E. C., Menon, D. K., Aigbirhio, F., Smith, R. A. J., & Murphy, M. P. (2010). Rapid uptake of lipophilic triphenylphosphonium cations by mitochondria in vivo following intravenous injection: Implications for mitochondria-specific therapies and probes. Biochimica et Biophysica Acta: General Subjects, 1800(9), 1009-1017. doi: 10.1016/j.bbagen.2010.06.001

Bokor, A. A. M., van Kan, J. A. L., & Poulter, R. T. M. (2010). Sexual mating of Botrytis cinerea illustrates prp8 intein heg activity. Fungal Genetics & Biology, 47(4), 392-398. doi: 10.1016/j.fgb.2010.01.003

Wharton, D. A., Selvanesan, L., & Marshall, C. J. (2010). Ice-active proteins from New Zealand snow tussocks, Chionochloa macra and c. Rigida. CryoLetters, 31(3), 239-248.

Simms, L. A., Doecke, J. D., Roberts, R. L., Fowler, E. V., Zhao, Z. Z., McGuckin, M. A., … McCallum, R., … Barclay, M. L., Gearry, R. B., Merriman, T. R., … Radford-Smith, G. L. (2010). KCNN4 gene variant is associated with ileal Crohn's disease in the Australian and New Zealand population. American Journal of Gastroenterology, 105, 2209-2217. doi: 10.1038/ajg.2010.161

Rautureau, G. J. P., Day, C. L., & Hinds, M. G. (2010). The structure of Boo/Diva reveals a divergent Bcl-2 protein. Proteins, 78(9), 2181-2186. doi: 10.1002/prot.22728

Dickson, G. C., Poulter, R. T. M., Maas, E. W., Probert, P. K., & Kieser, J. A. (2010). Marine bacterial succession as a potential indicator of postmortem submersion interval. Forensic Science International, 209(1-3), 1-10. doi: 10.1016/j.forsciint.2010.10.016

Simpson, G. G., Laurie, R. E., Dijkwel, P. P., Quesada, V., Stockwell, P. A., Dean, C., & Macknight, R. C. (2010). Noncanonical translation initiation of the Arabidopsis flowering time and alternative polyadenylation regulator FCA. Plant Cell, 22(11), 3764-3777. doi: 10.1105/tpc.110.077990

Phipps-Green, A. J., Hollis-Moffatt, J. E., Dalbeth, N., Merriman, M. E., Topless, R., Gow, P. J., Harrison, A. A., Highton, J., … Stamp, L. K., & Merriman, T. R. (2010). A strong role for the ABCG2 gene in susceptibility to gout in New Zealand Pacific Island and Caucasian, but not Māori, case and control sample sets. Human Molecular Genetics, 19(24), 4813-4819. doi: 10.1093/hmg/ddq412

Lewis, J. G., Jones, L. M., Legge, M., & Elder, P. A. (2010). Corticosteroid-binding globulin, cortisol, free cortisol, and sex hormone-binding globulin responses following oral glucose challenge in spinal cord-injured and able-bodied men. Hormone & Metabolic Research, 42(12), 882-886. doi: 10.1055/s-0030-1265128

Guise, C. P., Abbattista, M. R., Singleton, R. S., Holford, S. D., Connolly, J., Dachs, G. U., Fox, S. B., Pollock, R., Harvey, J., Guilford, P., … Patterson, A. V. (2010). The bioreductive prodrug PR-104A is activated under aerobic conditions by human aldo-keto reductase 1C3. Cancer Research, 70(4), 1573-1584. doi: 10.1158/0008-5472.CAN-09-3237

Yeterian, E., Martin, L. W., Guillon, L., Journet, L., Lamont, I. L., & Schalk, I. J. (2010). Synthesis of the siderophore pyoverdine in Pseudomonas aeruginosa involves a periplasmic maturation. Amino Acids, 38(5), 1447-1459. doi: 10.1007/s00726-009-0358-0

Duncan, E. J., & Dearden, P. K. (2010). Evolution of a genomic regulatory domain: The role of gene co-option and gene duplication in the enhancer of split complex. Genome Research, 20, 917-928. doi: 10.1101/gr.104794.109

Bouwer, A. L., Netter, P., Kemp, R. A., & McLellan, A. D. (2010). A defined serum-free medium useful for monitoring anti-melanoma responses induced by dendritic cell immunotherapy. Journal of Immunological Methods, 352, 178-181. doi: 10.1016/j.jim.2009.11.001

Smith, K. F., Acosta, H., Broom, J. E., & Rhodes, L. L. (2010). Identification of non-indigenous marine macroalgae from New Zealand aquaria outlets. New Zealand Journal of Marine & Freshwater Research, 44(1), 29-37. doi: 10.1080/00288331003641679

Merriman, T. R., & Dalbeth, N. (2010). The genetic basis of hyperuricaemia and gout [Bases génétiques de l'hyperuricémie et de la goutte]. Revue du Rhumatisme Monographies, 77(4), 328-334. doi: 10.1016/j.monrhu.2010.06.006

Brace, R. J., Sorrenson, B., Sviridov, D., & McCormick, S. P. A. (2010). A gel-based method for purification of apolipoprotein A-I from small volumes of plasma. Journal of Lipid Research, 51, 3370-3376. doi: 10.1194/jlr.D008300

Couñago, R. M., Fleming, S. B., Mercer, A. A., & Krause, K. L. (2010). Crystallization and preliminary X-ray analysis of the chemokine-binding protein from orf virus (Poxviridae). Acta Crystallographica Section F, F66, 819-823. doi: 10.1107/S1744309110018166

Wilson, M. J., McKelvey, B. H., van der Heide, S., & Dearden, P. K. (2010). Notch signaling does not regulate segmentation in the honeybee, Apis mellifera. Development Genes & Evolution, 220(7-8), 179-190. doi: 10.1111/j.1365-2826.2010.02100.x

Stebbings, S., Jenks, K., Roberts, R., & Schultz, M. (2010). The immune response to gut bacteria in spondyloarthritis: A role in pathogenesis? Journal of Clinical Rheumatology & Musculoskeletal Medicine, 1(2).

Bernhardt, H. S., & Tate, W. P. (2010). The transition from noncoded to coded protein synthesis: Did coding mRNAs arise from stability-enhancing binding partners to tRNA? Biology Direct, 5, 16. doi: 10.1186/1745-6150-5-16

Panjaworayan, N., Payungporn, S., Poovorawan, Y., & Brown, C. M. (2010). Identification of an effective siRNA target site and functional regulatory elements, within the hepatitis B virus posttranscriptional regulatory element. Virology Journal, 7, 216. doi: 10.1186/1743-422x-7-216

Smith, J. M., Cridge, A. G., & Dearden, P. K. (2010). Germ cell specification and ovary structure in the rotifer Brachionus plicatilis. EvoDevo, 1, 5. doi: 10.1186/2041-9139-1-5

Machutta, C. A., Bommineni, G. R., Luckner, S. R., Kapilashrami, K., Ruzsicska, B., Simmerling, C., … Tonge, P. J. (2010). Slow onset inhibition of bacterial β-ketoacyl-acyl carrier protein synthases by thiolactomycin. Journal of Biological Chemistry, 285(9), 6161-6169. doi: 10.1074/jbc.M109.077909

Hohmann-Marriott, M. F., Takizawa, K., Eaton-Rye, J. J., Mets, L., & Minagawa, J. (2010). The redox state of the plastoquinone pool directly modulates minimum chlorophyll fluorescence yield in Chlamydomonas reinhardtii. FEBS Letters, 584, 1021-1026. doi: 10.1016/j.febslet.2010.01.052

Fukuzawa, R., Holman, S. K., Chow, C. W., Savarirayan, R., Reeve, A. E., & Robertson, S. P. (2010). WTX mutations can occur both early and late in the pathogenesis of Wilms tumour. Journal of Medical Genetics, 47, 791-794. doi: 10.1136/jmg.2010.080663

Young, D. J., Edgar, C. D., Poole, E. S., & Tate, W. P. (2010). The codon specificity of eubacterial release factors is determined by the sequence and size of the recognition loop. RNA, 16, 1623-1633. doi: 10.1261/rna.2117010

Rhodes, B., Merriman, M. E., Harrison, A., Nissen, M. J., Smith, M., Stamp, L., … Merriman, T. R., & Vyse, T. J. (2010). A genetic association study of serum acute-phase C-reactive protein levels in rheumatoid arthritis: Implications for clinical interpretation. PLoS Medicine, 7(9), e1000341. doi: 10.1371/journal.pmed.1000341

Zou, D., Yoon, H.-S., Perez, D., Weeks, R. J., Guilford, P., & Humar, B. (2009). Epigenetic silencing in non-neoplastic epithelia identifies E-cadherin (CDH1) as a target for chemoprevention of lobular neoplasia. Journal of Pathology, 218(2), 265-272. doi: 10.1002/path.2541

Kleffmann, T., Jongkees, S. A. K., Fairweather, G., Wilbanks, S. M., & Jameson, G. N. L. (2009). Mass-spectrometric characterization of two posttranslational modifications of cysteine dioxygenase. Journal of Biological Inorganic Chemistry, 14, 913-921. doi: 10.1007/s00775-009-0504-x

Day, R. C., Mueller, S., & Macknight, R. C. (2009). Identification of cytoskeleton-associated genes expressed during arabidopsis syncytial endosperm development. Plant Signaling & Behavior, 4(9), 883-886.

The Australia and New Zealand Multiple Sclerosis Genetics Consortium (ANZgene), including Clarke, G., McCallum, R., Merriman, M., Merriman, T., & Mason, D. (2009). Genome-wide association study identifies new multiple sclerosis susceptibility loci on chromosomes 12 and 20. Nature Genetics, 41(7), 824-828. doi: 10.1038/ng.396

Lamont, I. L., Konings, A. F., & Reid, D. W. (2009). Iron acquisition by Pseudomonas aeruginosa in the lungs of patients with cystic fibrosis. Biometals, 22(1), 53-60. doi: 10.1007/s10534-008-9197-9

Thompson, M. P., & Trayhum, P. (2009). Effect of salicylate on the expression of adipokines and glucose transporters in human adipocytes is modulated by hypoxia. Hormone & Metabolic Research, 41(8), 649-652. doi: 10.1055/s-0029-1214388

Jackson, A. P., Gamble, J. A., Yeomans, T., Moran, G. P., Saunders, D., Harris, D., … Goodwin, T. J., … Poulter, R. T., … Berriman, M. (2009). Comparative genomics of the fungal pathogens Candida dubliniensis and Candida albicans. Genome Research, 19(12), 2231-2244. doi: 10.1101/gr.097501.109

Jacobs, G. H., Chen, A., Stevens, S. G., Stockwell, P. A., Black, M. A., Tate, W. P., & Brown, C. M. (2009). Transterm: A database to aid the analysis of regulatory sequences in mRNAs. Nucleic Acids Research, 37(Database issue), D72-D76. doi: 10.1093/nar/gkn763

Hohmann-Marriott, M. F., Sousa, A. A., Azari, A. A., Glushakova, S., Zhang, G., Zimmerberg, J., & Leapman, R. D. (2009). Nanoscale 3D cellular imaging by axial scanning transmission electron tomography. Nature Methods, 6(10), 729-731. doi: 10.1038/nmeth.1367

Dearden, P. K., Duncan, E. J., & Wilson, M. J. (2009). Rna interference (RNAi) in honeybee (Apis mellifera) embryos. Cold Spring Harbor Protocols, 4(6). doi: 10.1101/pdb.prot5228

Phua, S. H., Dodds, K. G., Morris, C. A., Henry, H. M., Beattie, A. E., Garmonsway, H. G., … Crawford, A. M. (2009). A genome-screen experiment to detect quantitative trait loci affecting resistance to facial eczema disease in sheep. Animal Genetics, 40(1), 73-79. doi: 10.1111/j.1365-2052.2008.01803.x

Chen, C., Krause, K., & Pettitt, B. M. (2009). Advantage of being a dimer for Serratia marcescens endonuclease. Journal of Physical Chemistry B, 113(2), 511-521. doi: 10.1021/jp8057838

Wharton, D. A., Pow, B., Kristensen, M., Ramløv, H., & Marshall, C. J. (2009). Ice-active proteins and cryoprotectants from the New Zealand alpine cockroach, Celatoblatta quinquemaculata. Journal of Insect Physiology, 55(1), 27-31. doi: 10.1016/j.jinsphys.2008.09.007

Kafka, A. P., Kleffmann, T., Rades, T., & McDowell, A. (2009). Histidine residues in the peptide D-Lys6-GnRH: Potential for copolymerization in polymeric nanoparticles. Molecular Pharmaceutics, 6(5), 1483-1491. doi: 10.1021/mp900043e

Shirley, M., & Lamont, I. L. (2009). Role of TonB1 in pyoverdine-mediated signaling in Pseudomonas aeruginosa. Journal of Bacteriology, 191(18), 5634-5640. doi: 10.1128/JB.00742-09

Merriman, T. R. (2009). Type 1 diabetes, the A1 milk hypothesis and vitamin D deficiency. Diabetes Research & Clinical Practice, 83(2), 149-156. doi: 10.1016/j.diabres.2008.11.010

Heesch, S., Broom, J. E. S., Neill, K. F., Farr, T. J., Dalen, J. L., & Nelson, W. A. (2009). Ulva, Umbraulva and Gemina: Genetic survey of New Zealand taxa reveals diversity and introduced species. European Journal of Phycology, 44(2), 143-154. doi: 10.1080/09670260802422477

Cardno, T. S., Poole, E. S., Mathew, S. F., Graves, R., & Tate, W. P. (2009). A homogeneous cell-based bicistronic fluorescence assay for high-throughput identification of drugs that perturb viral gene recoding and read-through of nonsense stop codons. RNA, 15(8), 1614-1621. doi: 10.1261/rna.1586709

Anjomshoaa, A., Nasri, S., Humar, B., McCall, J. L., Chatterjee, A., Yoon, H.-S., McNoe, L., Black, M. A., & Reeve, A. E. (2009). Slow proliferation as a biological feature of colorectal cancer metastasis. British Journal of Cancer, 101(5), 822-828. doi: 10.1038/sj.bjc.6605229

Hollis-Moffatt, J. E., Xu, X., Dalbeth, N., Merriman, M. E., Topless, R., Waddell, C., … Harrison, A. A., Highton, J., … Stamp, L. K., & Merriman, T. R. (2009). Role of the urate transporter SLC2A9 gene in susceptibility to gout in New Zealand Māori, Pacific Island, and Caucasian case-control sample sets. Arthritis & Rheumatism, 60(11), 3485-3492. doi: 10.1002/art.24938

Humar, B., Blair, V., Charlton, A., More, H., Martin, I., & Guilford, P. (2009). E-cadherin deficiency initiates gastric signet-ring cell carcinoma in mice and man. Cancer Research, 69(5), 2050-2056.

Reid, D. W., Anderson, G. J., & Lamont, I. L. (2009). Role of lung iron in determining the bacterial and host struggle in cystic fibrosis. American Journal of Physiology: Lung Cellular & Molecular Physiology, 297(5), L795-L802. doi: 10.1152/ajplung.00132.2009

Prime, T. A., Blaikie, F. H., Evans, C., Nadtochiy, S. M., James, A. M., Dahm, C. C., … Smith, R. A. J., & Murphy, M. P. (2009). A mitochondria-targeted S-nitrosothiol modulates respiration, nitrosates thiols, and protects against ischemia-reperfusion injury. PNAS, 106(26), 10764-10769. doi: 10.1073/pnas.0903250106

Wilson, M. J., & Dearden, P. K. (2009). Tailless patterning functions are conserved in the honeybee even in the absence of Torso signaling. Developmental Biology, 335(1), 276-287. doi: 10.1016/j.ydbio.2009.09.002

Dearden, P. K., Duncan, E. J., & Wilson, M. J. (2009). Whole-mount in situ hybridization of honeybee (Apis mellifera) tissues. Cold Spring Harbor Protocols, 4(6). doi: 10.1101/pdb.prot5225

Couñago, R. M., Davlieva, M., Strych, U., Hill, R. E., & Krause, K. L. (2009). Biochemical and structural characterization of alanine racemase from Bacillus anthracis (ames). BMC Structural Biology, 9, 53. doi: 10.1186/1472-6807-9-53

Schalk, I. J., Lamont, I. L., & Cobessi, D. (2009). Structure-function relationships in the bifunctional ferrisiderophore FpvA receptor from Pseudomonas aeruginosa. Biometals, 22(4), 671-678. doi: 10.1007/s10534-008-9203-2

Lu, A.-T. T., Salpeter, S. R., Reeve, A. E., Eschrich, S., Johnston, P. G., Barrier, A. J., … Lin, A. Y. (2009). Gene expression profiles as predictors of poor outcomes in stage II colorectal cancer: A systematic review and meta-analysis. Clinical Colorectal Cancer, 8(4), 207-214. doi: 10.3816/CCC.2009.n.035

Chee Liew, L., Hecht, V., Laurie, R. E., Knowles, C. L., Vander Schoor, J. K., Macknight, R. C., & Weller, J. L. (2009). DIE NEUTRALIS and LATE BLOOMER 1 contribute to regulation of the pea circadian clock. Plant Cell, 21(10), 3198-3211. doi: 10.1105/tpc.109.067223

Graziano, F., Ruzzo, A., Canestrari, E., Loupakis, F., Santini, D., Rulli, E., Humar, B., & et al (2009). Variations in the interleukin-1 receptor antagonist gene impact on survival of patients with advanced colorectal cancer. Pharmacogenomics Journal, 9(1), 78-84. doi: 10.1038/tpj.2008.16

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Fukuzawa, R., Anaka, M. R., Heathcott, R. W., McNoe, L. A., Morison, I. M., Perlman, E. J., & Reeve, A. E. (2008). Wilms tumour histology is determined by distinct types of precursor lesions and not epigenetic changes. Journal of Pathology, 215(4), 377-387. doi: 10.1002/path.2366

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Taylor, C. J., Ireland, D. R., Ballagh, I., Bourne, K., Marechal, N. M., Turner, P. R., Bilkey, D. K., Tate, W. P., & Abraham, W. C. (2008). Endogenous secreted amyloid precursor protein-α regulates hippocampal NMDA receptor function, long-term potentiation and spatial memory. Neurobiology of Disease, 31(2), 250-260. doi: 10.1016/j.nbd.2008.04.011

Murphy, A. J., Woollard, K. J., Hoang, A., Mukhamedova, N., Stirzaker, R. A., McCormick, S. P. A., … Chin-Dusting, J. (2008). High-density lipoprotein reduces the human monocyte inflammatory response. Arteriosclerosis, Thrombosis, & Vascular Biology, 28(11), 2071-2077. doi: 10.1161/ATVBAHA.108.168690

Graziano, F., Ruzzo, A., . . ., Humar, B., Falcone, A., Giustini, L., … Magnani, M. (2008). Pharmacogenetic profiling for cetuximab plus irinotecan therapy in patients with refractory advanced colorectal cancer. Journal of Clinical Oncology, 26(9), 1427-1434. doi: 10.1200/JCO.2007.12.4602

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Legge, M., & Jones, L. M. (2008). Stem cell spinal cord regeneration: First do no harm. Journal of Medical Ethics, 34(12), 838-839. doi: 10.1136/jme.2007.022525

Shnyder, S. D., Mangum, J. E., & Hubbard, M. J. (2008). Triplex profiling of functionally distinct chaperones (ERp29/PDI/BiP) reveals marked heterogeneity of the endoplasmic reticulum proteome in cancer. Journal of Proteome Research, 7(8), 3364-3372.

Mace, P. D., Linke, K., Feltham, R., Schumacher, F.-R., Smith, C. A., Vaux, D. L., … Day, C. L. (2008). Structures of the cIAP2 RING domain reveal conformational changes associated with ubiquitin-conjugating enzyme (E2) recruitment. Journal of Biological Chemistry, 283(46), 31633-31640.

Bernhardt, H. S., & Tate, W. P. (2008). Self-assembling transfer RNA has potential for nanoparticle arrays. Current Applied Physics, 8(3-4), 380-382. doi: 10.1016/j.cap.2007.10.035

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Clark, M. B., Jänicke, M., Gottesbühren, U., Kleffmann, T., Legge, M., Poole, E. S., & Tate, W. P. (2007). A mammalian gene PEG10 expresses two reading frames by high efficiency -1 frameshifting in embryonic-associated tissues. Journal of Biological Chemistry, 282(52), 37359-37369.

Upritchard, H. G., Yang, J., Bremer, P. J., Lamont, I. L., & McQuillan, A. J. (2007). Adsorption to metal oxides of the Pseudomonas aeruginosa siderophore pyoverdine and implications for bacterial biofilm formation on metals. Langmuir, 23(13), 7189-7195.

Czabotar, P. E., Lee, E. F., van Delft, M. F., Day, C. L., Smith, B. J., Huang, D. C. S., … Colman, P. M. (2007). Structural insights into the degradation of Mcl-1 induced by BH3 domains. PNAS, 104(15), 6217-6222.

Legge, M., Fitzgerald, R., & Frank, N. (2007). A retrospective study of New Zealand case law involving assisted reproduction technology and the social recognition of 'new' family. Human Reproduction, 22(1), 17-25.

Lee, M. A., Manley, T. R., Glass, B. C., Anderson, R. M., Wilson, S. J., O'Keefe, J. S., … Phua, S. H., & Tate, M. L. (2007). Distribution of prion protein genotypes in breeds of sheep in New Zealand. New Zealand Veterinary Journal, 55(5), 222-227.

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Poulter, R. T. M., Goodwin, T. J. D., & Butler, M. I. (2007). The nuclear-encoded inteins of fungi. Fungal Genetics & Biology, 44(3), 153-179.

Juntarajumnong, W., Incharoensakdi, A., & Eaton-Rye, J. J. (2007). Identification of the start codon for sphS encoding the phosphate-sensing histidine kinase in Synechocystis sp. PCC 6803. Current Microbiology, 55, 142-146.

Humar, B., Fukuzawa, R., Blair, V., Dunbier, A., More, H., Charlton, A., … Reeve, A. E., … Guilford, P. (2007). Destabilized adhesion in the gastric proliferative zone and c-Src kinase activation mark the development of early diffuse gastric cancer. Cancer Research, 67(6), 2480-2489. doi: 10.1158/0008-5472.CAN-06-3021

Wirawan, R. E., Swanson, K. M., Kleffmann, T., Jack, R. W., & Tagg, J. R. (2007). Uberolysin: A novel cyclic bacteriocin produced by Streptococcus uberis. Microbiology, 153, 1619-1630.

Westphal, D., Ledgerwood, E. C., Hibma, M. H., Fleming, S. B., Whelan, E. M., & Mercer, A. A. (2007). A novel Bcl-2-like inhibitor of apoptosis is encoded by the parapoxvirus orf virus. Journal of Virology, 81(13), 7178-7188.

Owen, C. J., Kelly, H., Eden, J. A., Merriman, M. E., Pearce, S. H. S., & Merriman, T. R. (2007). Analysis of the Fc receptor-like-3 (FCRL3) locus in caucasians with autoimmune disorders suggests a complex pattern of disease association. Journal of Clinical Endocrinology & Metabolism, 92(3), 1106-1111.

More, H., Humar, B., Weber, W., Ward, R., Christian, A., Lintott, C., … Guilford, P. (2007). Identification of seven novel germline mutations in the human E-cadherin (CDH1) gene. Human Mutation, 28(2). doi: 10.1002/humu.9473

Goodwin, T. J. D., Busby, J. N., & Poulter, R. T. M. (2007). A yeast model for target-primed (non-LTR) retrotransposition. BMC Genomics, 8, 263. doi: 10.1186/1471-2164-8-263

Hong, J., Leung, E., Fraser, A. G., Merriman, T. R., Vishnu, P., & Krissansen, G. W. (2007). TLR2, TLR4 and TLR9 polymorphisms and Crohn's disease in a New Zealand caucasian cohort. Journal of Gastroenterology & Hepatology, 22, 1760-1766.

Day, R. C., McNoe, L., & Macknight, R. C. (2007). Evaluation of global RNA amplification and its use for high-throughput transcript analysis of laser-microdissected endosperm. International Journal of Plant Genomics, 2007, 61028.

Cochemé, H. M., Kelso, G. F., James, A. M., Ross, M. F., Trnka, J., Mahendiran, T., … Blaikie, F. H., Manas, A.-R. B., Porteous, C. M., Adlam, V. J., Smith, R. A. J., & Murphy, M. P. (2007). Mitochondrial targeting of quinones: Therapeutic implications. Mitochondrion, 7S, S94-S102.

Naot, D., Bava, U., Matthews, B., Callon, K. E., Gamble, G. D., Black, M., … Reid, I. R. (2007). Differential gene expression in cultured osteoblasts and bone marrow stromal cells from patients with Paget's disease of bone. Journal of Bone & Mineral Research, 22(2), 298-309. doi: 10.1359/JBMR.061108

Fukuzawa, R., & Reeve, A. E. (2007). Molecular pathology and epidemiology of nephrogenic rests and Wilms tumors. Journal of Pediatric Hematology/Oncology, 29(9), 589-594.

Swe, P. M., Heng, N. C. K., Ting, Y.-T., Baird, H. J., Carne, A., Tauch, A., Tagg, J. R., & Jack, R. W. (2007). ef1097 and ypkK encode enterococcin V583 and corynicin JK, members of a new family of antimicrobial proteins (bacteriocins) with modular structure from Gram-positive bacteria. Microbiology, 153, 3218-3227.

Hong, J., Leung, E., Fraser, A. G., Merriman, T. R., Vishnu, P., & Krissansen, G. W. (2007). Polymorphisms in NFKBIA and ICAM-1 genes in New Zealand caucasian Crohn's disease patients. Journal of Gastroenterology & Hepatology, 22, 1666-1670.

Mace, P. D., Cutfield, J. F., & Cutfield, S. M. (2007). Bacterial expression and purification of the ovine type II bone morphogenetic protein receptor ectodomain. Protein Expression & Purification, 52(1), 40-49.

Lin, Y.-H., Friederichs, J., Black, M. A., Mages, J., Rosenberg, R., Guilford, P. J., Phillips, V., Thompson-Fawcett, M., … van Rij, A., Yoon, H.-S., McCall, J. L., … Reeve, A. E. (2007). Multiple gene expression classifiers from different array platforms predict poor prognosis of colorectal cancer. Clinical Cancer Research, 13(2), 498-507. doi: 10.1158/1078-0432.CCR-05-2734

Kim, D., Jitrapakdee, S., & Thompson, M. (2007). Differential regulation of the promoter activity of the mouse UCP2 and UCP3 genes by MyoD and myogenin. Journal of Biochemistry & Molecular Biology, 40(6), 921-927.

Poole, E. S., Young, D. J., Askarian-Amiri, M. E., Scarlett, D.-J. G., & Tate, W. P. (2007). Accommodating the bacterial decoding release factor as an alien protein among the RNAs at the active site of the ribosome. Cell Research, 17, 591-607.

Josephs, T., Waugh, H., Kokay, I., Grattan, D., & Thompson, M. (2007). Fasting-induced adipose factor identified as a key adipokine that is up-regulated in white adipose tissue during pregnancy and lactation in the rat. Journal of Endocrinology, 194, 305-312.

Diggle, S. P., Matthijs, S., Wright, V. J., Fletcher, M. P., Chhabra, S. R., Lamont, I. L., … Williams, P. (2007). The Pseudomonas aeruginosa 4-quinolone signal molecules HHQ and PQS play multifunctional roles in quorum sensing and iron entrapment. Chemistry & Biology, 14, 87-96.

Turner, P. R., Bourne, K., Garama, D., Carne, A., Abraham, W. C., & Tate, W. P. (2007). Production, purification and functional validation of human secreted amyloid precursor proteins for use as neuropharmacological reagents. Journal of Neuroscience Methods, 164, 68-74.

Pearl, E. J., Tyndall, J. D. A., Poulter, R. T. M., & Wilbanks, S. M. (2007). Sequence requirements for splicing by the Cne PRP8 intein. FEBS Letters, 581, 3000-3004.

Juntarajumnong, W., Hirani, T. A., Simpson, J. M., Incharoensakdi, A., & Eaton-Rye, J. J. (2007). Phosphate sensing in Synechocystis sp. PCC 6803: SphU and the SphS-SphR two-component regulatory system. Archives of Microbiology, 188, 389-402.

Day, R. C., McNoe, L. A., & MacKnight, R. C. (2007). Transcript analysis of laser microdissected plant cells. Physiologia Plantarum, 129(2), 267-282.

Mountfort, D., Rhodes, L., Broom, J., Gladstone, M., & Tyrrell, J. (2007). Fluorescent in situ hybridisation assay as a species-specific identifier of the northern Pacific seastar, Asterias amurensis. New Zealand Journal of Marine & Freshwater Research, 41(3), 283-290. doi: 10.1080/00288330709509915

Wharton, D. A., Wilson, P. W., Mutch, J. S., Marshall, C. J., & Lim, M. (2007). Recrystallization inhibition assessed by splat cooling and optical recrystallometry. CryoLetters, 28(1), 61-68.

Summerfield, T. C., Eaton-Rye, J. J., & Sherman, L. A. (2007). Global gene expression of a ΔPsbO:ΔPsbU mutant and a spontaneous revertant in the cyanobacterium Synechocystis sp. strain PCC 6803. Photosynthesis Research, 94, 265-274.

Chyou, D. T., Rawle, V. L., & Trotman, C. N. A. (2007). Quaternary structure of Artemia haemoglobin II: Analysis of T and C polymer alignment and interpolymer interface. BMC Structural Biology, 7, 26. doi: 10.1186/1472-6807-7-26

Guilford, P., Blair, V., More, H., & Humar, B. (2007). A short guide to hereditary diffuse gastric cancer. Hereditary Cancer in Clinical Practice, 5(4), 183-194.

Hinds, M. G., Smits, C., Fredericks-Short, R., Risk, J. M., Bailey, M., Huang, D. C. S., & Day, C. L. (2007). Bim, Bad and Bmf: Intrinsically unstructured BH3-only proteins that undergo a localized conformational change upon binding to prosurvival Bcl-2 targets. Cell Death & Differentiation, 14, 128-136.

Zadissa, A., McEwan, J. C., & Brown, C. M. (2007). Inference of transcriptional regulation using gene expression data from the bovine and human genomes. BMC Genomics, 8, 265. doi: 10.1186/1471-2164-8-265

Roberts, R. L., Gearry, R. B., Hollis-Moffatt, J. E., Miller, A. L., Reid, J., Abkevich, V., … Merriman, T. R., Barclay, M. L., & Kennedy, M. A. (2007). IL23R R381Q and ATG16L1 T300A are strongly associated with Crohn's disease in a study of New Zealand Caucasians with inflammatory bowel disease. American Journal of Gastroenterology, 102, 2754-2761.

Jarvis, R. M., Göttert, J., Murphy, M. P., & Ledgerwood, E. C. (2007). Mitochondria-targeted antioxidants do not prevent tumour necrosis factor-induced necrosis of L929 cells. Free Radical Research, 41(9), 1041-1046.

Eaton-Rye, J. J. (2007). Celebrating Govindjee's 50 years in photosynthesis research and his 75th birthday. Photosynthesis Research, 93, 1-5.

Steer, S., Abkevich, V., Gutin, A., Cordell, H. J., Gendall, K. L., Merriman, M. E., Green, R. A., Rowley, K. A., Chapman, P., … Harrison, A. A., Highton, J., … O'Donnell, J., Stamp, L., … Merriman, T. R. (2007). Genomic DNA pooling for whole-genome association scans in complex disease: Empirical demonstration of efficacy in rheumatoid arthritis. Genes & Immunity, 8, 57-68. doi: 10.1038/sj.gene.6364359

Fukuzawa, R., Heathcott, R. W., More, H. E., & Reeve, A. E. (2007). Sequential WT1 and CTNNB1 mutations and alterations of β-catenin localisation in intralobar nephrogenic rests and associated Wilms tumours: Two case studies. Journal of Clinical Pathology, 60, 1013-1016.

Kleffmann, T., von Zychlinski, A., Russenberger, D., Hirsch-Hoffmann, M., Gehrig, P., Gruissem, W., & Baginsky, S. (2007). Proteome dynamics during plastid differentiation in rice. Plant Physiology, 143, 912-923. doi: 10.1104/pp.106.090738

Williams, J. M., Guévremont, D., Mason-Parker, S. E., Luxmanan, C., Tate, W. P., & Abraham, W. C. (2007). Differential trafficking of AMPA and NMDA receptors during long-term potentiation in awake adult animals. Journal of Neuroscience, 27(51), 14171-14178.

Frank, N., Fitzgerald, R., & Legge, M. (2007). Negotiating PKU: Insights from New Zealand. Sites, 4(1), 161-189.

Juntarajumnong, W., Eaton-Rye, J. J., & Incharoensakdi, A. (2007). Two-component signal transduction in Synechocystis sp. PCC 6803 under phosphate limitation: Role of acetyl phosphate. Journal of Biochemistry & Molecular Biology, 40(5), 708-714.

Carlton, T. M., Sullivan, J. T., Stuart, G. S., Hutt, K., Lamont, I. L., & Ronson, C. W. (2007). Ferrichrome utilization in a mesorhizobial population: Microevolution of a three-locus system. Environmental Microbiology, 9(12), 2923-2932.

Lin, H.-M., Chatterjee, A., Lin, Y.-H., Anjomshoaa, A., Fukuzawa, R., McCall, J. L., & Reeve, A. E. (2007). Genome wide expression profiling identifies genes associated with colorectal liver metastasis. Oncology Reports, 17(6), 1541-1549.

Jones, G. T., van Rij, A. M., Cole, J., Williams, M. J. A., Bateman, E. H., Marcovina, S. M., Deng, M., & McCormick, S. P. A. (2007). Plasma lipoprotein(a) indicates risk for 4 distinct forms of vascular disease. Clinical Chemistry, 53(4), 679-685.

Panjaworayan, N., Roessner, S. K., Firth, A. E., & Brown, C. M. (2007). HBVRegDB: Annotation, comparison, detection and visualization of regulatory elements in hepatitis B virus sequences. Virology Journal, 4, 136. Retrieved from

Keane, O. M., Dodds, K. G., Crawford, A. M., & McEwan, J. C. (2007). Transcriptional profiling of Ovis aries identifies Ovar-DQA1 allele frequency differences between nematode-resistant and susceptible selection lines. Physiological Genomics, 30, 253-261.

Easton, D. F., Pooley, K. A., Dunning, A. M., Pharoah, P. D. P., Thompson, D., Ballinger, D. G., … McCredie, M., … and also Fleming, J., Gardner, M., George, P., Reeve, T., & Robinson, B. (2007). Genome-wide association study identifies novel breast cancer susceptibility loci. Nature, 447, 1087-1095. doi: 10.1038/nature05887

Pearl, E. J., Bokor, A. A. M., Butler, M. I., Poulter, R. T. M., & Wilbanks, S. M. (2007). Preceding hydrophobic and β-branched amino acids attenuate splicing by the CnePRP8 intein. Biochimica et Biophysica Acta: General Subjects, 1774, 995-1001. doi: 10.1016/j.bbapap.2007.05.015

Aguilar-Rosas, R., Aguilar-Rosas, L. E., Sánchez-Rodrígue, I., Broom, J. E., & Nelson, W. A. (2007). Morfología y distribución de Porphyra hollenbergii (Bangiaceae, Rhodophyta) en la costa del Pacífico de México [Morphology and distribution of Porphyra hollenbergii (Bangiaceae, Rhodophyta) in the Pacific coast of México]. Revista Mexicana de Biodiversidad, 78, 351-357.

McKinney, C., & Merriman, T. R. (2007). The human genome and understanding of common disease: Present and future technologies. Cellular & Molecular Life Sciences, 64(7-8), 961-978.

Kerruish, N. J., Campbell-Stokes, P. L., Gray, A., Merriman, T. R., Robertson, S. P., & Taylor, B. J. (2007). Maternal psychological reaction to newborn genetic screening for type 1 diabetes. Pediatrics, 120(2), e324-e335.

Visca, P., Imperi, F., & Lamont, I. L. (2007). Pyoverdine siderophores: From biogenesis to biosignificance. Trends in Microbiology, 15(1), 22-30.

Strych, U., Davlieva, M., Longtin, J. P., Murphy, E. L., Im, H., Benedik, M. J., & Krause, K. L. (2007). Purification and preliminary crystallization of alanine racemase from Streptococcus pneumoniae. BMC Microbiology, 7, 40. doi: 10.1186/1471-2180-7-40

Soleimanpour-Lichaei, H. R., Kühl, I., Gaisne, M., Passos, J. F., Wydro, M., Rorbach, J., … Tate, W., … Chrzanowska-Lightowlers, Z. (2007). mtRF1a is a human mitochondrial translation release factor decoding the major termination codons UAA and UAG. Molecular Cell, 27, 745-757.

Ito, M., Nishiyama, H., Kawanishi, H., Matsui, S., Guilford, P., Reeve, A., & Ogawa, O. (2007). P21-activated kinase 1: A new molecular marker for intravesical recurrence after transurethral resection of bladder cancer. Journal of Urology, 178, 1073-1079.

Janko, K., Lecointre, G., DeVries, A., Couloux, A., Cruaud, C., & Marshall, C. (2007). Did glacial advances during the Pleistocene influence differently the demographic histories of benthic and pelagic Antarctic shelf fishes? Inferences from intraspecific mitochondrial and nuclear DNA sequence diversity. BMC Evolutionary Biology, 7, 220. doi: 10.1186/1471-2148-7-220

Gil, M., McKinney, C., Lee, M. K., Eells, J. B., Phyillaier, M. A., & Nikodem, V. M. (2007). Regulation of GTP cyclohydrolase I expression by orphan receptor Nurr1 in cell culture and in vivo. Journal of Neurochemistry, 101, 142-150.

Eaton-Rye, J. J. (2007). Snapshots of the Govindjee lab from the late 1960s to the late 1990s, and beyond... Photosynthesis Research, 94, 153-178.

Milligan, D. L., Tran, S. L., Strych, U., Cook, G. M., & Krause, K. L. (2007). The alanine racemase of Mycobacterium smegmatis is essential for growth in the absence of D-alanine. Journal of Bacteriology, 189(22), 8381-8386.

Botta, P., Radcliffe, R. A., Carta, M., Mameli, M., Daly, E., Floyd, K. L., … Valenzuela, C. F. (2007). Modulation of GABAA receptors in cerebellar granule neurons by ethanol: A review of genetic and electrophysiological studies. Alcohol, 41, 187-199. doi: 10.1016/j.alcohol.2007.04.004

Sowerby, S. J., Broom, M. F., & Petersen, G. B. (2007). Dynamically resizable nanometre-scale apertures for molecular sensing. Sensors & Actuators B, 123(1), 325-330. doi: 10.1016/j.snb.2006.08.031

Chen, C., Beck, B. W., Krause, K., Weksberg, T. E., & Pettitt, B. M. (2007). Effects of dimerization of Serratia marcescens endonuclease on water dynamics. Biopolymers, 85(3), 241-252.

Lu, Y.-I., Zhao, H., & Zou, D.-h. (2007). Expression of human glandular kallikrein 2 by Pichia pastoris (yeast) and its activity assay. Reproduction & Contraception, 27(7), 433-437.

Weksberg, T. E., Lynch, G. C., Krause, K. L., & Pettitt, B. M. (2007). Molecular dynamics simulations of Trichomonas vaginalis ferredoxin show a loop-cap transition. Biophysical Journal, 92(10), 3337-3345.

Wilcox, S. J., Barr, N., Broom, J., Furneaux, R. H., & Nelson, W. A. (2007). Using gigartinine to track the distribution of an alien species of Gracilaria in New Zealand. Journal of Applied Phycology, 19, 313-323.

Legge, M., & Fitzgerald, R. (2007). Risky knowledges: The sociocultural impacts of personal genetics in a knowledge-driven economy. New Zealand Medical Journal, 120(1262). Retrieved from

Glyn-Jones, S., Song, S., Black, M. A., Phillips, A. R. J., Choong, S. Y., & Cooper, G. J. S. (2007). Transcriptomic analysis of the cardiac left ventricle in a rodent model of diabetic cardiomyopathy: Molecular snapshot of a severe myocardial disease. Physiological Genomics, 28, 284-293. doi: 10.1152/physiolgenomics.00204.2006

Matsui, S., Ito, M., Nishiyama, H., Uno, H., Kotani, H., Watanabe, J., Guilford, P., Reeve, A., … Ogawa, O. (2007). Genomic characterization of multiple clinical phenotypes of cancer using multivariate linear regression models. Bioinformatics, 23(6), 732-738.

Duncan, E. J., Dodds, K. G., Henry, H. M., Thompson, M. P., & Puha, S. H. (2007). Cloning, mapping and association studies of the ovine ABCG2 gene with facial eczema disease in sheep. Animal Genetics, 38, 126-131. doi: 10.1111/j.1365-2052.2006.01557.x

van Stijn, T. C., French, M. C., Dodds, K. G., McEwan, J. C., Broad, T. E., Womack, J. E., … Galloway, S. M. (2007). Comparative mapping of sheep chromosome 2q. Cytogenetic & Genome Research, 116, 85-92.

Slatter, T. L., Williams, M. J. A., Frikke-Schmidt, R., Tybjærg-Hansen, A., Morison, I. M., & McCormick, S. P. A. (2006). Promoter haplotype of a new ABCA1 mutant influences expression of familial hypoalphalipoproteinemia. Atherosclerosis, 187, 393-400.

Wilson, M. J., & Lamont, I. L. (2006). Mutational analysis of an extracytoplasmic-function sigma factor to investigate its interactions with RNA polymerase and DNA. Journal of Bacteriology, 188(5), 1935-1942.

Leung, E., Hong, J., Fraser, A. G., Merriman, T. R., Vishnu, P., & Krissansen, G. W. (2006). Polymorphisms in the organic cation transporter genes SLC22A4 and SLC22A5 and Crohn's disease in a New Zealand Caucasian cohort. Immunology & Cell Biology, 84, 233-236.

Lamare, M. D., Barker, M. F., Lesser, M. P., & Marshall, C. (2006). DNA photorepair in echinoid embryos: Effects of temperature on repair rate in Antarctic and non-Antarctic species. Journal of Experimental Biology, 209, 5017-5028. doi: 10.1242/jeb.02598

Glaser, R. L., Ramsay, J. P., & Morison, I. M. (2006). The imprinted gene and parent-of-origin effect database now includes parental origin of de novo mutations. Nucleic Acids Research, 34(Database), D29-D31.

Dearden, P. K., Wilson, M. J., Sablan, L., Osborne, P. W., Havler, M., McNaughton, E., … Beye, M. (2006). Patterns of conservation and change in honey bee developmental genes. Genome Research, 16(11), 1376-1384. doi: 10.1101/gr.5108606

Nelson, W. A., Farr, T. J., & Broom, J. E. S. (2006). Phylogenetic relationships and generic concepts in the red order Bangiales: Challenges ahead. Phycologia, 45(3), 249-259.

Ackland, J. C., West, J. A., Scott, J., Zuccarello, G. C., & Broom, J. (2006). Biology of Porphyra pulchella sp. nov. from Australia and New Zealand. Algae, 21(2), 193-208.

Mace, P. D., Cutfield, J. F., & Cutfield, S. M. (2006). High resolution structures of the bone morphogenetic protein type II receptor in two crystal forms: Implications for ligand binding. Biochemical & Biophysical Research Communications, 351, 831-838.

Guo, Y., Lu, Y.-L., Zou, D.-h., Zhao, H., & Wang, Z.-S. (2006). Construction of recombination human zona peiiucida3/GST fusion protion gene expression vector. China Journal of Modern Medicine, 16(15), 2265-2268.

Davis, G. H., Balakrishnan, L., Ross, I. K., Wilson, T., Galloway, S. M., Lumsden, B. M., & et al (2006). Investigation of the Booroola (FecB) and Inverdale (FecXI) mutations in 21 prolific breeds and strains of sheep sampled in 13 countries. Animal Reproduction Science, 92, 87-96.

Covey, M. V., Murphy, M. P., Hobbs, C. E., Smith, R. A. J., & Oorschot, D. E. (2006). Effect of the mitochondrial antioxidant, Mito Vitamin E, on hypoxic-ischemic striatal injury in neonatal rats: A dose-response and stereological study. Experimental Neurology, 199, 513-519.

Ravelingien, A., Braeckman, J., & Legge, M. (2006). On the moral status of humanized chimeras and the concept of human dignity. Between the Species, VI. Retrieved from

Hall, G. D., Smith, B., Weeks, R. J., Selby, P. J., Southgate, J., & Chester, J. D. (2006). Novel urothelium specific gene expression identified by differential display reverse transcriptase-polymerase chain reaction. Journal of Urology, 175, 337-342.

Jacobs, G. H., Stockwell, P. A., Tate, W. P., & Brown, C. M. (2006). Transterm: Extended search facilities and improved integration with other databases. Nucleic Acids Research, 34(Database), D37-D40.

Blair, V., Martin, I., Shaw, D., Winship, I., Kerr, D., Arnold, J., … Cox, B., Humar, B., More, H., & Guilford, P. (2006). Hereditary diffuse gastric cancer: Diagnosis and management. Clinical Gastroenterology & Hepatology, 4, 262-275. doi: 10.1016/j.cgh.2005.12.003

Crawford, A. M., Paterson, K. A., Dodds, K. G., Diez Tascon, C., Williamson, P. A., Thomson, M. R., … McEwan, J. C. (2006). Discovery of quantitative trait loci for resistance to parasitic nematode infection in sheep: I. Analysis of outcross pedigrees. BMC Genomics, 7, 178. doi: 10.1186/1471-2164-7-178

Ross, M. F., Da Ros, T., Blaikie, F. H., Prime, T. A., Porteous, C. M., Severina, I. I., … Kjaergaard, H. G., Smith, R. A. J., & Murphy, M. P. (2006). Accumulation of lipophilic dications by mitochondria and cells. Biochemical Journal, 400, 199-208.

Butler, M. I., Gray, J., Goodwin, T. J. D., & Poulter, R. T. M. (2006). The distribution and evolutionary history of the PRP8 intein. BMC Evolutionary Biology, 6, 42. doi: 10.1186/1471-2148-6-42

Chung, B. Y. W., Simons, C., Firth, A. E., Brown, C. M., & Hellens, R. P. (2006). Effect of 5'UTR introns on gene expression in Arabidopsis thaliana. BMC Genomics, 7, 120. doi: 10.1186/1471-2164-7-120

The Honeybee Genome Sequencing Consortium, including Beggs, K. T., Mercer, A. R., Dearden, P. K., & Wilson, M. J. (2006). Insights into social insects from the genome of the honeybee Apis mellifera. Nature, 443, 931-949.

Kleffmann, T., Hirsch-Hoffmann, M., Gruissem, W., & Baginsky, S. (2006). plprot: A comprehensive proteome database for different plastid types. Plant & Cell Physiology, 47(3), 432-436.

Summerfield, T. C., & Eaton-Rye, J. J. (2006). Pseudocyphellaria crocata, P. neglecta and P. perpetua from the Northern and Southern Hemispheres are a phylogenetic species and share cyanobionts. New Phytologist, 170, 597-607.

Breslow, N. E., Beckwith, J. B., Perlman, E. J., & Reeve, A. E. (2006). Age distributions, birth weights, nephrogenic rests, and heterogeneity in the pathogenesis of Wilms Tumor. Pediatric Blood & Cancer, 47, 260-267.

Goodwin, T. J. D., Butler, M. I., & Poulter, R. T. M. (2006). Multiple, non-allelic, intein-coding sequences in eukaryotic RNA polymerase genes. BMC Biology, 4, 38. doi: 10.1186/1741-7007-4-38

Keane, O. M., Zadissa, A., Wilson, T., Hyndman, D. L., Greer, G. J., Baird, D. B., … Crawford, A. M., & McEwan, J. C. (2006). Gene expression profiling of Naïve sheep genetically resistant and susceptible to gastrointestinal nematodes. BMC Genomics, 7, 42. doi: 10.1186/1471-2164-7-42

Bowles, J., Knight, D., Smith, C., Wilhelm, D., Richman, J., Mamiya, S., … Wilson, M. J., … Koopman, P. (2006). Retinoid signaling determines germ cell fate in mice. Science, 312, 596-600.

Morris, C. A., Cullen, N. G., Hickey, S. M., Dobbie, P. M., Veenvliet, B. A., Manley, T. R., … Wilson, T. (2006). Genotypic effects of calpain 1 and calpastatin on the tenderness of cooked M. longissimus dorsi steaks from Jersey x Limousin, Angus and Hereford-cross cattle. Animal Genetics, 37(4), 411-414.

Cridge, A. G., Major, L. L., Mahagaonkar, A. A., Poole, E. S., Isaksson, L. A., & Tate, W. P. (2006). Comparison of characteristics and function of translation termination signals between and within prokaryotic and eukaryotic organisms. Nucleic Acids Research, 34(7), 1959-1973. doi: 10.1093/nar/gkl074

Ramos-de la Medina, A., More, H., Medina-Franco, H., Humar, B., Gamboa, A., Ortiz, L. J., … Guilford, P. (2006). Single nucleotide polymorphisms (SNPs) at CDH1 promoter region in familial gastric cancer. Revista Española de Enfermedades Digestivas, 98(1), 36-41.

Sabater-Muñoz, B., Legeai, F., Rispe, C., Bonhomme, J., Dearden, P., Dossat, C., … Tagu, D. (2006). Large-scale gene discovery in the pea aphid Acyrthosiphon pisum (Hemiptera). Genome Biology, 7(R21). doi: 10.1186/gb-2006-7-3-r21

Lee, M. A., Keane, O. M., Glass, B. C., Manley, T. R., Cullen, N. G., Dodds, K. G., … Schreiber, M., … Zadissa, A., Wilson, T., & McEwan, J. C. (2006). Establishment of a pipeline to analyse non-synonymous SNPs in Bos taurus. BMC Genomics, 7, 298. doi: 10.1186/1471-2164-7-298

Dearden, P. K. (2006). Germ cell development in the Honeybee (Apis mellifera); Vasa and Nanos expression. BMC Developmental Biology, 6, 6. doi: 10.1186/1471-213X-6-6

Lamont, I. L., Martin, L. W., Sims, T., Scott, A., & Wallace, M. (2006). Characterization of a gene encoding an acetylase required for pyoverdine synthesis in Pseudomonas aeruginosa. Journal of Bacteriology, 188(8), 3149-3152. doi: 10.1128/JB.188.8.3149-3152.2006

Weeks, R. J., & Morison, I. M. (2006). Detailed methylation analysis of CpG islands on human chromosome region 9p21. Genes Chromosomes & Cancer, 45(4), 357-364.

Yang, J., Bremer, P. J., Lamont, I. L., & McQuillan, A. J. (2006). Infrared spectroscopic studies of siderophore-related hydroxamic acid ligands adsorbed on titanium dioxide. Langmuir, 22(24), 10109-10117.

Nelson, W. A., Farr, T. J., & Broom, J. E. S. (2006). Phylogenetic diversity of New Zealand Gelidiales as revealed by rbcL sequence data. Journal of Applied Phycology, 18(3-5), 653-661.

Ramsay, J. P., Sullivan, J. T., Stuart, G. S., Lamont, I. L., & Ronson, C. W. (2006). Excision and transfer of the Mesorhizobium loti R7A symbiosis island requires an integrase IntS, a novel recombination directionality factor RdfS, and a putative relaxase RlxS. Molecular Microbiology, 62(3), 723-734. doi: 10.1111/j.1365-2958.2006.05396.x

Sadighi, M., Reichman, N., Wilson, K., Carne, A., & Thompson, M. P. (2006). A nitrogen balance experiment using simulated urine samples. Biochemistry & Molecular Biology Education, 34(4), 289-293.

Wilson, M. J., Bowles, J., & Koopman, P. (2006). The matricellular protein SPARC is internalized in Sertoli, Leydig, and germ cells during testis differentiation. Molecular Reproduction & Development, 73, 531-539.

Zou, D.-h., Zhang, J.-Y., Guo, Y., Lu, Y.-L., Zuo, W.-J., & Wang, Z.-S. (2006). Construction and expression of recombinant human prostate-specific antigen expression vector pPICZα-mPSA. China Journal of Modern Medicine, 16(10), 1441-1444.

van Delft, M. F., Wei, A. H., Mason, K. D., Vandenberg, C. J., Chen, L., Czabotar, P. E., … Day, C. L., … Huang, D. C. S. (2006). The BH3 mimetic ABT-737 targets selective Bcl-2 proteins and efficiently induces apoptosis via Bak/Bax if Mcl-1 is neutralized. Cancer Cell, 10(5), 389-399.

Firth, A. E., & Brown, C. M. (2006). Detecting overlapping coding sequences in virus genomes. BMC Bioinformatics, 7, 75. doi: 10.1186/1471-2105-7-75

Pearce, S. H. S., & Merriman, T. R. (2006). Genetic progress towards the molecular basis of autoimmunity. Trends in Molecular Medicine, 12(2), 90-98.

Crockford, G. P., Linger, R., Hockley, S., Dudakia, D., Johnson, L., Huddart, R., … Guilford, P., … Rapley, E. A. (2006). Genome-wide linkage screen for testicular germ cell tumour susceptibility loci. Human Molecular Genetics, 15(3), 443-451. doi: 10.1093/hmg/ddi459

Davis, G. H., Farquhar, P. A., O'Connell, A. R., Everett-Hincks, J. M., Wishart, P. J., Galloway, S. M., & Dodds, K. G. (2006). A putative autosomal gene increasing ovulation rate in Romney sheep. Animal Reproduction Science, 92, 65-73.

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Journal - Research Other

Keats, T., Rosengren, R. J., & Ashton, J. C. (2017). The rationale for repurposing sildenafil as an adjuvant to lung cancer treatment. Anti-Cancer Agents in Medicinal Chemistry. Advance online publication. doi: 10.2174/1871520617666171103100959

Merriman, T., & Terkeltaub, R. (2017). PPARGC1B: Insight into the expression of the gouty inflammation phenotype: PPARGC1B and gouty inflammation. Rheumatology, 56(3), 323-325. doi: 10.1093/rheumatology/kew453

Gurney, J. K., McGlynn, K. A., Stanley, J., Merriman, T., Signal, V., Shaw, C., Edwards, R., … Sarfati, D. (2017). Risk factors for cryptorchidism. Nature Reviews Urology, 14, 534-548. doi: 10.1038/nrurol.2017.90

Stamp, L. K., Merriman, T., Frampton, C., Zhang, M., Wallace, M., Miner, J. N., & Dalbeth, N. (2017). Plasma oxypurinol as a measure of adherence in clinical trials. Annals of the Rheumatic Diseases. Advance online publication. doi: 10.1136/annrheumdis-2016-210661

Hoeksema, K., Wee, R., Macdonald, A., Guilford, P., Wall, J., & Cornwall, J. (2017). Where to from here? Posthumous healthcare data, digital e(lectronic)-mortality and New Zealand’s healthcare future. New Zealand Medical Journal, 130(1459), 64-70. Retrieved from

Liu, Y.-F., Oey, I., Bremer, P., Carne, A., & Silcock, P. (2017). Bioactive peptides derived from egg proteins: A review. Critical Reviews in Food Science & Nutrition. Advance online publication. doi: 10.1080/10408398.2017.1329704

Legge, M. (2017). A forensic dilemma. New Zealand Journal of Medical Laboratory Science, 71(1), 13. [Case Study].

Al-Ani, A. H., Antoun, J. S., Thomson, W. M., Merriman, T. R., & Farella, M. (2017). Hypodontia: An update on its etiology, classification, and clinical management. BioMed Research International, 2017, 9378325. doi: 10.1155/2017/9378325

Dalbeth, N., Stamp, L. K., & Merriman, T. R. (2017). The genetics of gout: Towards personalised medicine? BMC Medicine, 15(1), 108. doi: 10.1186/s12916-017-0878-5

Lim, C. S., & Brown, C. (2017). A new class of ribozyme from hepatitis B virus. FEBS Journal, 284(8), 1182-1183. doi: 10.1111/febs.14062

Legge, M., & Fitzgerald, R. (2017). Deciding by numbers: The genesis of prenatal serum screening cut-off limits for down syndrome and neural tube defects. New Zealand Journal of Medical Laboratory Science, 71(3), 107-112. [Review].

Eaton-Rye, J. J. (2017). Assembly of the photosystem II membrane-protein complex of oxygenic photosynthesis. Frontiers in Plant Science, 8, 884. doi: 10.3389/fpls.2017.00884

Brewster, J. L., Finn, T. J., Ramirez, M. A., & Patrick, W. M. (2016). Whither life? Conjectures on the future evolution of biochemistry. Biology Letters, 12(8), 20160269. doi: 10.1098/rsbl.2016.0269

Hoekendijk, D. J. L., Hill, P. C., & Sowerby, S. J. (2016). Rationale for quality assurance in fecal egg monitoring of soil-transmitted helminthiasis [Perspective]. American Journal of Tropical Medicine & Hygiene, 95(3), 502-504. doi: 10.4269/ajtmh.15-0463

Legge, M. (2016). A retrospective look at clinical biochemistry in 1957. New Zealand Journal of Medical Laboratory Science, 70(3), 114-116.

López-Isac, E., Martín, J.-E., Assassi, S., Simeón, C. P., Carreira, P., Ortego-Centeno, N., … Merriman, T., … Martín, J. (2016). IRF4 newly identified as a common susceptibility locus for systemic sclerosis and rheumatoid arthritis in a cross-disease meta-analysis of genome-wide association studies [Brief report]. Arthritis & Rheumatology, 68(9), 2338-2344. doi: 10.1002/art.39730

Legge, M., & Fitzgerald, R. (2016). Valuing embryos as both commodities and singularities. New Zealand Medical Journal, 129(1431), 80-84. Retrieved from

Lester, S., Hewitt, A. W., Ruediger, C. D., Bradbury, L., De Smit, E., Wiese, M. D., … Harrison, A., … Merriman, T. R., … Hill, C. L. (2016). PTPN22 R620W minor allele is a genetic risk factor for giant cell arteritis [Short report]. RMD Open, 2, e000246. doi: 10.1136/rmdopen-2016-000246

Kumaramanickavel, G., Denton, M. J., & Legge, M. (2015). No evidence for a genetic blueprint: The case of the "complex" mammalian photoreceptor [Brief communication]. Indian Journal of Ophthalmology, 63(4), 353-354. doi: 10.4103/0301-4738.158093

Robinson, P. C., & Merriman, T. R. (2015). Does midlife obesity really lower dementia risk? Lancet Diabetes & Endocrinology, 3(7), 501. doi: 10.1016/s2213-8587(15)00218-1

McKinney, C. (2015). Is resistance (n)ever futile? A response to "Futility in chronic anorexia nervosa: A concept whose time has not yet come" by Cynthia Geppert. American Journal of Bioethics, 15(7), 53-54. doi: 10.1080/15265161.2015.1042991

Sundborn, G., Thornley, S., Te Morenga, L., & Merriman, T. (2014). FIZZ Sugary Drink Free Pacific by 2030: Symposium declaration. New Zealand Medical Journal, 127(1392). Retrieved from

Duncan, E. J., Johnson, T. K., Whisstock, J. C., Warr, C. G., & Dearden, P. K. (2014). Capturing embryonic development from metamorphosis: How did the terminal patterning signalling pathway of Drosophila evolve? Current Opinion in Insect Science, 1, 45-51. doi: 10.1016/j.cois.2014.04.007

Macaulay, E. C., Donovan, E. L., Leask, M. P., Bloomfield, F. H., Vickers, M. H., Dearden, P. K., … and on behalf of the Gravida International College Summit Team. (2014). The importance of early life in childhood obesity and related diseases: A report from the 2014 Gravida Strategic Summit. Journal of Developmental Origins of Health & Disease, 5(6), 398-407. doi: 10.1017/S2040174414000488

Cornwall, J., Slatter, T., Guilford, P., Print, C. G., Henaghan, M., & Wee, R. (2014). Culture, law, ethics, and social implications: Is society ready for advanced genomic medicine? Australasian Medical Journal, 7(4), 200-202. doi: 10.4066/amj.2014.2069

Chatterjee, A., Stockwell, P. A., Horsfield, J. A., Morison, I. M., & Nakagawa, S. (2014). Base-resolution DNA methylation landscape of zebrafish brain and liver [Data in brief]. Genomics Data, 2, 342-344. doi: 10.1016/j.gdata.2014.10.008

Dalbeth, N., House, M. E., Gamble, G. D., Home, A., Purvis, L., Stewart, A., Merriman, M., Cadzow, M., Phipps-Green, A., & Merriman, T. (2014). Population-specific effects of SLC17A1 genotype on serum urate concentrations and renal excretion of uric acid during a fructose load. Annals of the Rheumatic Diseases. doi: 10.1136/annrheumdis-2013-203767

Legge, M., & Fitzgerald, R. P. (2014). Ethics of mitochondrial therapy for deafness. New Zealand Medical Journal, 127(1405). Retrieved from

Smith, D. J., Anderson, G. J., Lamont, I. L., Masel, P., Campbell, S. C., & Reid, D. W. (2013). Accurate assessment of systemic iron status in cystic fibrosis will avoid the hazards of inappropriate iron supplementation. Journal of Cystic Fibrosis, 12(3), 303-304. doi: 10.1016/j.jcf.2012.10.001

Gow, P., Stamp, L., Merriman, T., Stuart, R., Winnard, D., Lindsay, K., for the New Zealand Rheumatology Association, and the Māori Gout Action Group. (2013). New urate-lowering therapies in Aotearoa New Zealand: A response to Dr Lance Gravatt's letter on benzbromarone hepatotoxicity. New Zealand Medical Journal, 126(1382). Retrieved from

Willson, J. S. B., Godwin, T. D., Wiggins, G. A. R., Guilford, P. J., & McCall, J. L. (2013). Primary hepatocellular neoplasms in a MODY3 family with a novel HNF1A germline mutation. Journal of Hepatology, 59(4), 904-907. doi: 10.1016/j.jhep.2013.05.024

Gosling, A. L., Matisoo-Smith, E., & Merriman, T. R. (2013). Gout in Māori: Modern affliction or ancestral trait? Rheumatology. doi: 10.1093/rheumatology/ket299

Eaton-Rye, J. J. (2013). Govindjee at 80: More than 50 years of free energy for photosynthesis. Photosynthesis Research, 116(2), 111-144. doi: 10.1007/s11120-013-9921-3

Hsu, A., Dalbeth, N., Gow, P., Harrison, A., Highton, J., Jones, P. B., Stamp, L. K., & Merriman, T. R. (2012). No evidence for association of Chr 9p21 variant rs1333049 with gout in New Zealand case-control sample sets. Rheumatology, 51, 1129-1130. doi: 10.1093/rheumatology/kes029

Phipps-Green, A., McKinney, C., Rossol, M., Merriman, M. E., Topless, R., Hollis-Moffatt, J. E., Wan Taib, W. R., … Harrison, A. A., Highton, J., … Stamp, L. K., … Merriman, T. R. (2011). Analysis of association of DNASE2 promoter variation with rheumatoid arthritis in European Caucasians [Letter]. Annals of the Rheumatic Diseases, 70(8), 1512-1514. doi: 10.1136/ard.2010.138727

Pemberton, C. J., Richards, A. M., Siriwardena, M., Cameron, V. A., Yandle, T. G., Nicholls, M. G., Kleffmann, T., & Ruygrok, P. (2011). [Response to letter regarding article, B-Type natriuretic peptide signal peptide circulates in human blood: Evaluation as a potential biomarker of cardiac ischemia]. Circulation, 123(6), e234. doi: 10.1161/CIRCULATIONAHA.110.003574

Roberts, R. L., Zhang, M., Marinaki, A. M., & Stamp, L. K. (2010). Does genetic variability in aldehyde oxidase and molybdenum cofactor sulfurase predict nonresponse to allopurinol? [Letter to the editors]. Alimentary Pharmacology & Therapeutics, 32(2), 310-311. doi: 10.1111/j.1365-2036.2010.04349.x

Hollis-Moffatt, J. E., Gearry, R. B., Barclay, M. L., Merriman, T. R., & Roberts, R. L. (2010). Consolidation of evidence for association of the KIAA1109-TENR-IL2-IL21 rs6822844 variant with Crohn's disease [Letter]. American Journal of Gastroenterology, 105(5), 1204-1205. doi: 10.1038/ajg.2010.34

Schultz, M., Roberts, R. L., & Butt, A. G. (2010). Understanding probiotic treatment strategies in inflammatory bowel disease, with a special emphasis on the intestinal barrier. European Gastroenterology & Hepatology Review, 6(1), 58-65.

Roberts, R. L., Gearry, R. B., & Barclay, M. L. (2010). Allopurinol—thiopurine combination therapy in inflammatory bowel disease: Are there genetic clues to this puzzle? [Editorial]. Pharmacogenomics, 11(11), 1505-1508. doi: 10.2217/pgs.10.143

McKinney, C. (2010). [Review of the book Artscience: Creativity in the post-Google generation]. Junctures, 13, 93-94.

Jones, G. T., Deng, M., Hammond-Tooke, G. D., McCormick, S. P. A., & van Rij, A. M. (2009). Increased plasma lipoprotein(a) found in large-artery atherosclerotic, but not small-artery occlusive, stroke [Letter to the editor]. Clinical Chemistry, 55(10), 1888-1890. doi: 10.1373/clinchem.2009.126771

Phipps-Green, A. J., Topless, R. K. G., Merriman, M. E., Dalbeth, N., Gow, P. J., Harrison, A. A., Highton, J., … Stamp, L. K., … Merriman, T. R. (2009). No evidence for association of the systemic lupus erythematosus-associated ITGAM variant, R77H, with rheumatoid arthritis in the Caucasian population [Letter to the editor]. Rheumatology, 48(12), 1614-1615. doi: 10.1093/rheumatology/kep254

Humar, B., & Guilford, P. (2009). Hereditary diffuse gastric cancer: A manifestation of lost cell polarity. Cancer Science, 100(7), 1151-1157. doi: 10.1111/j.1349-7006.2009.01163.x

Payungporn, S., . . ., Panjaworayan, N., & ... (2008). Detection and discrimination of WU/KI polyomaviruses by real-time PCR with melting curve analysis [Short communication]. Journal of Virological Methods, 153, 70-73. doi: 10.1016/j.jviromet.2008.06.018

Legge, M., Fitzgerald, R., & Jones, L. (2008). An alternative consideration in drug testing in elite athletes [Viewpoint]. New Zealand Medical Journal, 121(1278). Retrieved from

Winnard, D., Kake, T., Gow, P., Barratt-Boyes, C., Harris, V., ..., Merriman, T., & Dalbeth, N. (2008). Debunking the myths to provide 21st Century management of gout [Viewpoint]. New Zealand Medical Journal, 121(1274). Retrieved from

Leung, E., Hong, J., Fraser, A. G., Merriman, T. R., Vishnu, P., & Krissansen, G. W. (2007). Colony-stimulating factor-1 receptor gene polymorphisms and Crohn's disease [Letter to the editor]. International Journal of Colorectal Disease, 22(8), 995-996.

Leung, E., Hong, J., Fraser, A. G., Merriman, T. R., Vishnu, P., & Krissansen, G. W. (2007). Peroxisome proliferator-activated receptor-γ gene polymorphisms and Crohn's disease [Letter to the editor]. International Journal of Colorectal Disease, 22(4), 453-454.

Chen, C., Beck, B. W., Krause, K., & Pettitt, B. M. (2006). Solvent participation in Serratia marcescens endonuclease complexes. Proteins, 62, 982-995.

Bernhardt, H. S., & Tate, W. P. (2006). Transfer RNA as a potential building block for nanotechnology. Chemistry in New Zealand, 70(1), 7-11.

Leung, E., Hong, J., Fraser, A., Merriman, T., & Krissansen, G. (2006). PPAR-γ and Crohn's disease in New Zealand [Correspondence]. Gastroenterology, 130(7), 2249-2250.

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Journal - Professional & Other Non-Research Articles

Hooper, A. J., McCormick, S. P. A., Hegele, R. A., & Burnett, J. R. (2017). Clinical utility gene card for: Tangier disease. European Journal of Human Genetics, 25, e1-e3. doi: 10.1038/ejhg.2017.72

Packer, M. A., Eaton-Rye, J. J., Summerfield, T. C., Guieysse, B., & Wood, S. A. (2017). Introduction: Proceedings of the 2015 New Zealand symposium on algae and photosynthetic prokaryotes. New Zealand Journal of Botany, 55, 1-4. doi: 10.1080/0028825X.2016.1261908

Patrick, W. M. (2017). [Review of the book Biochemical evolution: The pursuit of perfection]. Quarterly Review of Biology, 92(3), 332-333. doi: 10.1086/693623

Roberts, R. L., Wallace, M. C., Wright, D. F. B., Cadzow, M., Dalbeth, N., Jones, P. B., Stamp, L. K., Harrison, A. A., Black, M. A., & Merriman, T. R. (2014). Fréquence des polymorphismes du CYP2C9 chez les Polynésiens et pertinence potentielle concernant le traitement de la goutte par benzbromarone. Revue du Rhumatisme, 81(2), 159-163. doi: 10.1016/j.rhum.2013.08.005

Legge, M. (2014). The dawn of the clinical scientist [Editorial]. New Zealand Journal of Medical Laboratory Science, 68(2), 42.

Eaton-Rye, J. J., Packer, M. A., Summerfield, T. C., & Wood, S. A. (2014). Algal and cyanobacterial bioenergy and diversity. New Zealand Journal of Botany, 52(1), 1-5. doi: 10.1080/0028825X.2013.877947

Robinson, P. C., Taylor, W. J., & Merriman, T. R. (2013). Author reply. Internal Medicine Journal, 43(4), 466. doi: 10.1111/imj.12094

Bentley, R. W., Keown, D., Merriman, T. R., Krishnan, M. R., Gearry, R. B., Barclay, M. L., Roberts, R. L., & Day, A. S. (2011). Vitamin D receptor gene polymorphism associated with inflammatory bowel disease in New Zealand males [Letter to the editor]. Alimentary Pharmacology & Therapeutics, 33(7), 855-856. doi: 10.1111/j.1365-2036.2011.04588.x

Roberts, R. L., Merriman, T. R., & Upton, J. D. (2010). High frequency of MCM6 lactose intolerance genotype in Polynesian People [Letter to the editor]. Alimentary Pharmacology & Therapeutics, 32(6), 828-829. doi: 10.1111/j.1365-2036.2010.04398.x

Reid, D. W., O'May, C., Roddam, L. F., & Lamont, I. L. (2009). Chelated iron as an anti-Pseudomonas aeruginosa biofilm therapeutic strategy. Journal of Applied Microbiology, 106(3), 1058. doi: 10.1111/j.1365-2672.2008.03955.x

Wilson, N., Baker, M., Jennings, L., Murdoch, D., Krause, K., Edwards, R., … Douwes, J., … Rice, G. (2009). A design fault in New Zealand's health research funding system exposed by pandemic influenza [Letter]. New Zealand Medical Journal, 122(1304). Retrieved from

Reid, D. W., O'May, C., Kirov, S. M., Roddam, L., Lamont, I. L., & Sanderson, K. (2009). Iron chelation directed against biofilms as an adjunct to conventional antibiotics [Letter to the editor]. American Journal of Physiology: Lung Cellular & Molecular Physiology, 296(5), L857-L858. doi: 10.1152/ajplung.00058.2009

Reid, D. W., Anderson, G. J., & Lamont, I. L. (2008). Cystic fibrosis: Ironing out the problem of infection? American Journal of Physiology: Lung Cellular & Molecular Physiology, 295(1), L23-L24. doi: 10.1152/ajplung.90299.2008

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