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PUBH726 Applied Biostatistics 2 - Regression methods

Use of multiple regression methods in health sciences research. Development of linear, logistic, Poisson and Cox regression models for estimation and prediction including covariate adjustment, dummy variables, transformations and interactions.

This distance paper will introduce students to the main regression methods in health sciences research and is highly recommended for all students that want and/or need to analyse quantitative data. The paper builds on knowledge and skills learned in PUBH 725 and also has a strong applied component. From a public health point of view, students will learn how to generate and interpret statistical models to adjust for confounders as well as identifying the variables that have a statistical effect on the outcome of interest. The regression topics covered include: analysis of variance, correlation, reliability studies, multiple linear regression and logistic regression. For this paper, students must have access to a computer with an Internet connection.

Students will learn R, an open-source, free statistical software under the terms of the GNU General Public License.

Paper title Applied Biostatistics 2 - Regression methods
Paper code PUBH726
Subject Public Health
EFTS 0.1250
Points 15 points
Teaching period 1st Non standard period (24 April 2017 - 16 June 2017)
Domestic Tuition Fees (NZD) $1,346.38
International Tuition Fees (NZD) $4,562.50

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Prerequisite
HASC 413 or PUBH 725
Restriction
HASC 415, STAT 241, STAT 341
Limited to
MA, MAppSc, MClinPharm, MHealSc, MPH, MPharm, MPHC, MSc, DPH, PGDipAppSc, PGDipArts, PGDipHealSc, PGDipMLSc, PGDipPharm, PGDipSci, PGCertPH
Notes
(i) The prerequisite may be waived for students with an equivalent level of knowledge. (ii) MPHC students require approval from the Board of Studies in Primary Health Care to enrol for this paper. (iii) This paper runs for the second half of first semester
Paper Structure
  1. ANOVA
  2. Correlation and Reliability
  3. Simple Linear Regression
  4. Multiple Linear Regression
  5. Statistical Modelling
  6. Logistic Regression
Assessment Structure
  1. Participation and contribution: 10% of the marks for this paper will derive from your contribution to Zoom sessions and discussion forums. The marks will not be awarded for the correctness of your contributions, but for making an effort to engage with the question at hand and to use the reading and other learning that you have done to progress the discussion.
  2. Assignment 1: This assignment, worth 40% of the mark for the paper, assesses your ability to analyse and report statistical models where the outcome is continuous. Emphasis is made on checking assumptions and model simplification. The assignment will also assess your ability to analyse relatively simple reliability studies.
  3. Assignment 2: This assignment, worth 50% of the mark for the paper, assesses your understanding to analyse and report statistical models where the outcome is influenced by two or more predictors. Emphasis is made on model simplification and understanding interactions.
Eligibility
Students who have completed an undergraduate degree in any discipline or recognised equivalent.
Contact
Department of Preventive and Social Medicine, Dunedin campus: postgrad.publichealthdunedin@otago.ac.nz
Teaching staff
Paper Convenor: Dr Josie Athens
Teaching Arrangements
  1. Compulsory webinar sessions: Tuesday afternoons 4pm-6pm.
  2. Block day: To be determined between the weeks 4 and 5 of the semester.
Textbooks
  1. Kirkwood, Betty R., and Jonathan AC Sterne. 2003. Essential Medical Statistics. Second Edition. Blackwell.
  2. Dalgaard, Peter. 2008. Introductory Statistics with R. Second Edition. Springer.
Course outline
Graduate Attributes Emphasised
Interdisciplinary perspective, Lifelong learning, Scholarship, Critical thinking, Information literacy, Research, Self-motivation.
View more information about Otago's graduate attributes.
Learning Outcomes
Students who successfully complete the paper will be able to
  • Demonstrate an understanding of the application of regression methods to help answer scientific questions and the assumptions inherent in the models
  • Demonstrate skills in model selection, model fitting, and model interpretation for estimation and prediction
  • Apply skills to develop a regression model and perform an analysis to help answer a scientific question
  • Describe and test the underlying assumptions of the model and carry out simple sensitivity analyses

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Timetable

1st Non standard period (24 April 2017 - 16 June 2017)

Location
Dunedin
Teaching method
This paper is taught through Distance Learning
Learning management system
Moodle

Use of multiple regression methods in health sciences research. Development of linear, logistic, Poisson and Cox regression models for estimation and prediction including covariate adjustment, dummy variables, transformations and interactions.

This distance paper will introduce students to the main regression methods in health sciences research and is highly recommended for all students that want and/or need to analyse quantitative data. The paper builds on knowledge and skills learned in PUBH 725 and also has a strong applied component. From a public health point of view, students will learn how to generate and interpret statistical models to adjust for confounders as well as identifying the variables that have a statistical effect on the outcome of interest. The regression topics covered include: analysis of variance, correlation, reliability studies, multiple linear regression and logistic regression. For this paper, students must have a computer with an Internet connection and be computer literate.

Students will learn R, an open-source, free statistical software under the terms of the GNU General Public License.

Paper title Applied Biostatistics 2 - Regression methods
Paper code PUBH726
Subject Public Health
EFTS 0.1250
Points 15 points
Teaching period 1st Non standard period (23 April 2018 - 15 June 2018)
Domestic Tuition Fees (NZD) $1,373.25
International Tuition Fees (NZD) $4,745.00

^ Top of page

Prerequisite
HASC 413 or PUBH 725
Restriction
HASC 415, STAT 241, STAT 341
Limited to
MA, MAppSc, MClinPharm, MHealSc, MPH, MPharm, MPHC, MSc, DPH, PGDipAppSc, PGDipArts, PGDipHealSc, PGDipMLSc, PGDipPharm, PGDipSci, PGCertPH
Notes
(i) The prerequisite may be waived for students with an equivalent level of knowledge. (ii) MPHC students require approval from the Board of Studies in Primary Health Care to enrol for this paper. (iii) This paper runs for the second half of first semester. (iv) Please note that from 2019, this paper will be offered in the first half of the second semester.
Eligibility
Students who have completed an undergraduate degree in any discipline or recognised equivalent.
Contact
Department of Preventive and Social Medicine, Dunedin campus: postgrad.publichealthdunedin@otago.ac.nz
Teaching staff
Paper Convenor: Dr Josie Athens
Paper Structure
  1. ANOVA
  2. Correlation and Reliability
  3. Simple Linear Regression
  4. Multiple Linear Regression
  5. Statistical Modelling
  6. Logistic Regression
Assessment Structure
  1. Participation and contribution: 10% of the marks for this paper will derive from your contribution to Zoom sessions and discussion forums. The marks will not be awarded for the correctness of your contributions, but for making an effort to engage with the question at hand and to use the reading and other learning that you have done to progress the discussion.
  2. Assignment 1: This assignment, worth 40% of the mark for the paper, assesses your ability to analyse and report statistical models where the outcome is continuous. Emphasis is made on checking assumptions and model simplification. The assignment will also assess your ability to analyse relatively simple reliability studies.
  3. Assignment 2: This assignment, worth 50% of the mark for the paper, assesses your understanding to analyse and report statistical models where the outcome is influenced by two or more predictors. Emphasis is made on model simplification and understanding interactions.
Teaching Arrangements
  1. Compulsory webinar sessions: Tuesday afternoons 4pm-6pm.
  2. Block day: To be determined between the weeks 4 and 5 of the semester.
Textbooks
  1. Kirkwood, Betty R., and Jonathan AC Sterne. 2003. Essential Medical Statistics. Second Edition. Blackwell.
  2. Dalgaard, Peter. 2008. Introductory Statistics with R. Second Edition. Springer.
Graduate Attributes Emphasised
Interdisciplinary perspective, Lifelong learning, Scholarship, Critical thinking, Information literacy, Research, Self-motivation.
View more information about Otago's graduate attributes.
Learning Outcomes
Students who successfully complete the paper will be able to
  • Demonstrate an understanding of the application of regression methods to help answer scientific questions and the assumptions inherent in the models
  • Demonstrate skills in model selection, model fitting and model interpretation for estimation and prediction
  • Apply skills to develop a regression model and perform an analysis to help answer a scientific question
  • Describe and test the underlying assumptions of the model and carry out simple sensitivity analyses

^ Top of page

Timetable

1st Non standard period (23 April 2018 - 15 June 2018)

Location
Dunedin
Teaching method
This paper is taught through Distance Learning
Learning management system
Moodle