AIC.secr                Compare SECR Models
D.designdata            Construct Density Design Data
FAQ                     Frequently Asked Questions, And Others
LLsurface.secr          Plot likelihood surface
LR.test                 Likelihood Ratio Test for SECR Models
animalID                Dissect Spatial Capture History Object
autoini                 Initial Parameter Values for SECR
capthist                Spatial Capture History Object
closedN                 Closed population estimates
closure.test            Closure tests
coef.secr               Coefficients of secr Object
confint.secr            Profile Likelihood Confidence Intervals
covariates              Covariates Attribute
dbar                    Home Range Statistics
deermouse               Deermouse Live-trapping Datasets
derived                 Derived Parameters of Fitted SECR Model
detectfn                Detection Functions
detector                Detector Type
deviance                Deviance of fitted secr model and residual
                        degrees of freedom
distancetotrap          Distance To Nearest Detector
ellipse.secr            Confidence ellipse
empirical.varD          Design-based Variance of Density
esa.plot                Mask Buffer Diagnostic Plot
esa.plot.secr           Mask Buffer Diagnostic Plot (internal)
housemouse              House mouse live trapping data
ip.secr                 Spatially Explicit Capture-Recapture by Inverse
                        Prediction
logit                   Logit Transformation
logmultinom             Multinomial Coefficient of SECR Likelihood
make.capthist           Construct capthist Object
make.grid               Build Detector Array
make.mask               Build Habitat Mask
make.tri                Build Detector Array on Triangular or Hexagonal
                        Grid
mask                    Mask Object
mask.check              Mask Diagnostics
model.average           Model averaging for SECR Models
ms                      Multi-session Objects
ovenbird                Ovenbird Mist-netting Dataset
ovensong                Ovenbird Acoustic Dataset
pdot                    Net Detection Probability
pdot.contour            Contour Detection Probability
plot.capthist           Plot Detection Histories
plot.mask               Plot Habitat Mask
plot.popn               Plot popn Object
plot.secr               Plot Detection Functions
plot.traps              Plot traps Object
polyarea                Area of simple polygon
popn                    Population Object
possum                  Brushtail Possum Trapping Dataset
predict.secr            SECR Model Predictions
print.capthist          Print Detections
print.secr              Print secr Object
print.traps             Print Detectors
rbind.capthist          Combine capthist Objects
rbind.popn              Combine popn Objects
rbind.traps             Combine traps Objects
read.SPACECAP           Exchange data with SPACECAP package
read.capthist           Import or export data
read.mask               Read Habitat Mask From File
read.traps              Read Detector Data From File
reduce                  Combine Columns
reduce.capthist         Combine Occasions
score.test              Score Test for SECR Models
searcharea              Detector Attributes
secr-package            Spatially Explicit Capture-Recapture Models
secr.design.MS          Construct Detection Model Design Matrices and
                        Lookups
secr.fit                Spatially Explicit Capture-Recapture
secr.make.newdata       Create Default Design Data
secr.model              Spatially Explicit Capture-Recapture Models
secr.model.density      Density Models
secr.model.detection    Models for Detection Parameters
secrdemo                SECR Models Fitted to Demonstration Data
session                 Session Vector
sim.capthist            Simulate Detection Histories
sim.popn                Simulate 2-D Population
sim.secr                Simulate From Fitted secr Model
skink                   Skink Pitfall Data
spacing                 Detector or Mask Spacing
stoatDNA                Stoat DNA Data
subset.capthist         Subset or Split capthist Object
subset.mask             Subset Mask Object
subset.traps            Subset traps Object
suggest.buffer          Mask Buffer Width
summary.capthist        Summarise Detections
summary.mask            Summarise Habitat Mask
summary.traps           Summarise Detector Array
transformations         Transform Point Array
traps                   Detector Array
trim                    Drop Unwanted List Components
usage                   Detector Usage
vcov.secr               Variance - Covariance Matrix of SECR Parameters
verify                  Check SECR Data
write.captures          Write Data to Text File
