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Health Sciences profile

Professor Clive Ronson

PositionProfessor
DepartmentDepartment of Microbiology and Immunology
QualificationsBSc (Massey) PhD (Warw)
Research summaryPlant-microbe interactions, horizontal gene transfer, symbiotic nitrogen fixation, bacterial genetics and genomics

Research

Clive is a microbial geneticist with primary research interests in how microbes and plants recognise each other and develop a nitrogen-fixing symbiosis, and in microbial evolution by horizontal gene transfer and adaptive mutation. He is one of two international partners of the Centre for Carbohydrate Recognition and Signalling based in Denmark and is a Fellow of the Royal Society of New Zealand.

Publications

Ramsay, J. P., Bastholm, T. R., Verdonk, C. J., Tambalo, D. D., Sullivan, J. T., Harold, L. K., … Perry, B. J., Jowsey, W., Morris, C., … Ronson, C. W. (2022). An epigenetic switch activates bacterial quorum sensing and horizontal transfer of an integrative and conjugative element. Nucleic Acids Research, 50(2), 975-988. doi: 10.1093/nar/gkab1217

Gysel, K., Laursen, M., Thygesen, M. B., Lironi, D., Bozsóki, Z., Hjuler, C. T., … Sullivan, J. T., Ronson, C. W., … Andersen, K. R. (2021). Kinetic proofreading of lipochitooligosaccharides determines signal activation of symbiotic plant receptors. PNAS, 118(44), e2111031118. doi: 10.1073/pnas.2111031118

Payne, L. J., Todeschini, T. C., Wu, Y., Perry, B. J., Ronson, C. W., Fineran, P. C., … Jackson, S. A. (2021). Identification and classification of antiviral defence systems in bacteria and archaea with PADLOC reveals new system types. Nucleic Acids Research. Advance online publication. doi: 10.1093/nar/gkab883

Colombi, E., Perry, B. J., Sullivan, J. T., Bekuma, A. A., Terpolilli, J. J., Ronson, C. W., & Ramsay, J. P. (2021). Comparative analysis of integrative and conjugative mobile genetic elements in the genus Mesorhizobium. Microbial Genomics, 7, 000657. doi: 10.1099/mgen.0.000657

Perry, B. J., Ferguson, S., Laugraud, A., Wakelin, S. A., Reeve, W., & Ronson, C. W. (2021). Complete genome sequences of Trifolium spp. inoculant strains Rhizobium leguminosarum sv. trifolii TA1 and CC275e: Resources for genomic study of the Rhizobium-Trifolium symbiosis. Molecular Plant-Microbe Interactions, 34(1), 131-134. doi: 10.1094/mpmi-08-20-0220-a

Ramsay, J. P., & Ronson, C. W. (2015). Genetic regulation of symbiosis island transfer in Mesorhizobium loti. In F. J. de Bruijn (Ed.), Biological nitrogen fixation. (pp. 219-223). Hoboken, New Jersey: Wiley. doi: 10.1002/9781119053095

Chapter in Book - Research

Saeki, K., & Ronson, C. W. (2014). Genome sequence and gene functions in Mesorhizobium loti and relatives. In S. Tabata & J. Stougaard (Eds.), Compendium of plant genomes: The Lotus japonicus genome. (pp. 41-57). Berlin, Germany: Springer. doi: 10.1007/978-3-662-44270-8_5

Chapter in Book - Research

Ronson, C. W., Hynes, M. F., Ramsay, J. P., & Sullivan, J. T. (2013). Symbiosis islands. In S. Maloy & K. Hughes (Eds.), Brenner's encyclopedia of genetics. (2nd ed.) (pp. 598-600). London, UK: Elsevier. doi: 10.1016/B978-0-12-374984-0.01497-2

Chapter in Book - Research

de Bruijn, F. J., Ampe, F., Batut, J., Berges, H., Davalos, M., Davey, M., … Ronson, C. W., … Sullivan, J. T., … Vriezen, C. (2002). Genetics and genomics of stress - Induced gene expression in rhizobia. In T. Finan, M. O'Brian, D. Layzell, K. Vessey & W. Newton (Eds.), Nitrogen Fixation: Global Perspectives. (pp. 75-79). Oxford and New York: CABI Publishing.

Chapter in Book - Research

Ronson, C. W., Sullivan, J. T., Trzebiatowski, J. R., Gouzy, J., & de Bruijn, F. J. (2002). Comparative genomics of the symbiosis islands of Mesorhizobium loti. In S. A. Leong, C. Allen & E. W. Triplett (Eds.), Biology of Plant-Microbe Interactions: Volume 3. (pp. 325-330). St Paul, Minnesota, USA: International Society for Molecular Plant Microbes Interactions.

Chapter in Book - Research

Ronson, C. W., Sullivan, J. T., Wijkstra, G. S., Carlton, T. M., Muirhead, K., Trzebiatowski, J. R., … de Bruijn, F. J. (2002). Genome diversity at the PHE-tRNA locus in a field population of mesorhizobia. In T. Finan, M. O'Brian, D. Layzell, J. Vessey & W. Newton (Eds.), Nitrogen Fixation: Global Perspectives. (pp. 66-74). New York and Oxford: CABI Publishing.

Chapter in Book - Research

Ronson, C. W., & Sullivan, J. T. (2001). Symbiosis islands. In S. Brenner & J. H. Miller (Eds.), Encyclopedia of Genetics. (pp. 1902-1903). London: Academic Press.

Chapter in Book - Research

Sullivan, J. T., Trzebiatowski, J. R., de Bruijn, F. J., & Ronson, C. W. (2000). The symbiosis island of a Mesorhizobium strain that nodulates Lotus. In E. W. Triplett (Ed.), Prokaryotic Nitrogen Fixation: A Model System for Analysis of a Biological Process. (pp. 693-704). Wymondham, UK: Horizon Scientific Press.

Chapter in Book - Research

Palacios, R., Boistard, P., Fonstein, M., Gottfert, M., Perret, X., Ronson, C. W., & Sobral, B. (1998). Genome structure in nitrogen-fixing organisms. In C. Elmerich, A. Kondorosi & W. E. Newton (Eds.), Biological Nitrogen Fixation for the 21st Century. (pp. 541-547). Netherlands: Kluwer Academic Publishers.

Chapter in Book - Research

Ronson, C. W., & Lowther, W. L. (1996). Issues affecting the competiveness of white clover rhizobia. In White Clover: New Zealand's Competitive Edge. (pp. 87-90). Christchurch: Agronomy Society of New Zealand and New Zealand Gr.

Chapter in Book - Research

Ramsay, J. P., Bastholm, T. R., Verdonk, C. J., Tambalo, D. D., Sullivan, J. T., Harold, L. K., … Perry, B. J., Jowsey, W., Morris, C., … Ronson, C. W. (2022). An epigenetic switch activates bacterial quorum sensing and horizontal transfer of an integrative and conjugative element. Nucleic Acids Research, 50(2), 975-988. doi: 10.1093/nar/gkab1217

Journal - Research Article

Colombi, E., Perry, B. J., Sullivan, J. T., Bekuma, A. A., Terpolilli, J. J., Ronson, C. W., & Ramsay, J. P. (2021). Comparative analysis of integrative and conjugative mobile genetic elements in the genus Mesorhizobium. Microbial Genomics, 7, 000657. doi: 10.1099/mgen.0.000657

Journal - Research Article

Gysel, K., Laursen, M., Thygesen, M. B., Lironi, D., Bozsóki, Z., Hjuler, C. T., … Sullivan, J. T., Ronson, C. W., … Andersen, K. R. (2021). Kinetic proofreading of lipochitooligosaccharides determines signal activation of symbiotic plant receptors. PNAS, 118(44), e2111031118. doi: 10.1073/pnas.2111031118

Journal - Research Article

Payne, L. J., Todeschini, T. C., Wu, Y., Perry, B. J., Ronson, C. W., Fineran, P. C., … Jackson, S. A. (2021). Identification and classification of antiviral defence systems in bacteria and archaea with PADLOC reveals new system types. Nucleic Acids Research. Advance online publication. doi: 10.1093/nar/gkab883

Journal - Research Article

Bozsoki, Z., Gysel, K., Hansen, S. B., Lironi, D., Krönauer, C., Feng, F., … Sullivan, J. T., Ronson, C. W., … Radutoiu, S. (2020). Ligand-recognizing motifs in plant LysM receptors are major determinants of specificity. Science, 369(6504), 663-670. doi: 10.1126/science.abb3377

Journal - Research Article

Ferguson, S., Major, A. S., Sullivan, J. T., Bourke, S. D., Kelly, S. J., Perry, B. J., & Ronson, C. W. (2020). Rhizobium leguminosarum bv. trifolii NodD2 enhances competitive nodule colonization in the clover-rhizobium symbiosis. Applied & Environmental Microbiology, 86(18), e01268-20. doi: 10.1128/aem.01268-20

Journal - Research Article

Perry, B. J., Sullivan, J. T., Colombi, E., Murphy, R. J. T., Ramsay, J. P., & Ronson, C. W. (2020). Symbiosis islands of Loteae-nodulating Mesorhizobium comprise three radiating lineages with concordant nod gene complements and nodulation host-range groupings. Microbial Genomics, 6(9), 1-15. doi: 10.1099/mgen.0.000426

Journal - Research Article

Shi, S., Villamizar, L., Gerard, E., Ronson, C., Wakelin, S., Ballard, R., … O'Callaghan, M. (2019). Increasing biological nitrogen fixation by white clover-rhizobia symbiosis. Journal of New Zealand Grasslands, 81, 231-234. doi: 10.33584/jnzg.2019.81.380

Journal - Research Article

Verdonk, C. J., Sullivan, J. T., Williman, K. M., Nicholson, L., Bastholm, T. R., Hynes, M. F., Ronson, C. W., … Ramsay, J. P. (2019). Delineation of the integrase-attachment and origin-of-transfer regions of the symbiosis island ICEMlSymR7A. Plasmid, 104, 102416. doi: 10.1016/j.plasmid.2019.102416

Journal - Research Article

Kelly, S., Sullivan, J. T., Kawaharada, Y., Radutoiu, S., Ronson, C. W., & Stougaard, J. (2018). Regulation of Nod factor biosynthesis by alternative NodD proteins at distinct stages of symbiosis provides additional compatibility scrutiny. Environmental Microbiology, 20(1), 97-110. doi: 10.1111/1462-2920.14006

Journal - Research Article

Haskett, T. L., Terpolilli, J. J., Bekuma, A., O'Hara, G. W., Sullivan, J. T., Wang, P., Ronson, C. W., & Ramsay, J. P. (2016). Assembly and transfer of tripartite integrative and conjugative genetic elements. PNAS, 113(42), 12268-12273. doi: 10.1073/pnas.1613358113

Journal - Research Article

Muszyński, A., Heiss, C., Hjuler, C. T., Sullivan, J. T., Kelly, S. J., Thygesen, M. B., … Ronson, C. W. (2016). Structures of exopolysaccharides involved in receptor-mediated perception of Mesorhizobium loti by Lotus japonicus. Journal of Biological Chemistry, 291(40), 20946-20961. doi: 10.1074/jbc.M116.743856

Journal - Research Article

Panda, P., Vanga, B. R., Lu, A., Fiers, M., Fineran, P. C., Butler, R., … Ronson, C. W., & Pitman, A. R. (2016). Pectobacterium atrosepticum and Pectobacterium carotovorum harbor distinct, independently acquired integrative and conjugative elements encoding coronafacic acid that enhance virulence on potato stems. Frontiers in Microbiology, 7, 397. doi: 10.3389/fmicb.2016.00397

Journal - Research Article

Delestre, C., Laugraud, A., Ridgeway, H. J., Ronson, C., O'Callaghan, M., Barrett, B., … Wakelin, S. (2015). Genome sequence of the clover symbiont Rhizobium leguminosarum bv. trifolii strain CC275e. Standards in Genomic Sciences, 10, 121. doi: 10.1186/s40793-015-0110-1

Journal - Research Article

Kawaharada, Y., Kelly, S., Wibroe Nielsen, M., Hjuler, C. T., Gysel, K., Muszyński, A., … Ronson, C. W., … Stougaard, J. (2015). Receptor-mediated exopolysaccharide perception controls bacterial infection. Nature, 523, 308-312. doi: 10.1038/nature14611

Journal - Research Article

Ramsay, J. P., Tester, L. G. L., Major, A. S., Sullivan, J. T., Edgar, C. D., Kleffmann, T., … Tate, W. P., … Ronson, C. W. (2015). Ribosomal frameshifting and dual-target antiactivation restrict quorum-sensing–activated transfer of a mobile genetic element. PNAS, 112(3), 4104-4109. doi: 10.1073/pnas.1501574112

Journal - Research Article

Reeve, W., Sullivan, J., Ronson, C., Tian, R., Munk, C., Han, C., … Kyrpides, N. (2015). High-quality draft genome sequence of the Lotus spp. microsymbiont Mesorhizobium loti strain CJ3Sym. Standards in Genomic Sciences, 10, 54. doi: 10.1186/s40793-015-0049-2

Journal - Research Article

Vanga, B. R., Ramakrishnan, P., Butler, R. C., Toth, I. K., Ronson, C. W., Jacobs, J. M. E., & Pitman, A. R. (2015). Mobilization of horizontally acquired island 2 is induced in planta in the phytopathogen Pectobacterium atrosepticum SCRI1043 and involves the putative relaxase ECA0613 and quorum sensing. Environmental Microbiology, 17(11), 4730-4744. doi: 10.1111/1462-2920.13024

Journal - Research Article

Dam, S., Dyrlund, T. F., Ussatjuk, A., Jochimsen, B., Nielsen, K., Goffard, N., … Ronson, C. W., … Stougaard, J. (2014). Proteome reference maps of the Lotus japonicus nodule and root. Proteomics, 14(2-3), 230-240. doi: 10.1002/pmic.201300353

Journal - Research Article

Kelly, S., Sullivan, J., Ronson, C., Tian, R., Bräu, L., Davenport, K., … Reeve, W. (2014). Genome sequence of the Lotus spp. microsymbiont Mesorhizobium loti strain NZP2037. Standards in Genomic Sciences, 9, 7. doi: 10.1186/1944-3277-9-7

Journal - Research Article

Kelly, S., Sullivan, J., Ronson, C., Tian, R., Bräu, L., Munk, C., … Reeve, W. (2014). Genome sequence of the Lotus spp. microsymbiont Mesorhizobium loti strain R7A. Standards in Genomic Sciences, 9, 6. doi: 10.1186/1944-3277-9-6

Journal - Research Article

Maolanon, N. N., Blaise, M., Sørensen, K. K., Thygesen, M. B., Cló, E., Sullivan, J. T., Ronson, C. W., … Jensen, K. J. (2014). Lipochitin oligosaccharides immobilized through oximes in glycan microarrays bind LysM proteins. ChemBioChem, 15(3), 425-434. doi: 10.1002/cbic.201300520

Journal - Research Article

Reeve, W., Sullivan, J., Ronson, C., Tian, R., Bräu, L., Davenport, K., … Kyrpides, N. (2014). Genome sequence of the Lotus corniculatus microsymbiont Mesorhizobium loti strain R88B. Standards in Genomic Sciences, 9, 3. doi: 10.1186/1944-3277-9-3

Journal - Research Article

Kelly, S. J., Muszyński, A., Kawaharada, Y., Hubber, A. M., Sullivan, J. T., Sandal, N., … Ronson, C. W. (2013). Conditional requirement for exopolysaccharide in the Mesorhizobium-Lotus symbiosis. Molecular Plant-Microbe Interactions, 26(3), 319-329. doi: 10.1094/mpmi-09-12-0227-r

Journal - Research Article

Ramsay, J. P., Major, A. S., Komarovsky, V. M., Sullivan, J. T., Dy, R. L., Hynes, M. F., … Ronson, C. W. (2013). A widely conserved molecular switch controls quorum sensing and symbiosis island transfer in Mesorhizobium loti through expression of a novel antiactivator. Molecular Microbiology, 87(1), 1-13. doi: 10.1111/mmi.12079

Journal - Research Article

Sheen, T. R., O'Callaghan, M., Smalley, D. J., Ronson, C. W., & Hurst, M. R. H. (2013). Serratia entomophila bet gene induction and the impact of glycine betaine accumulation on desiccation tolerance. Journal of Applied Microbiology, 114(2), 470-481. doi: 10.1111/jam.12052

Journal - Research Article

Sullivan, J. T., Brown, S. D., & Ronson, C. W. (2013). The NifA-RpoN regulon of Mesorhizobium loti strain R7A and its symbiotic activation by a novel LacI/GalR-family regulator. PLoS ONE, 8(1), e53762. doi: 10.1371/journal.pone.0053762

Journal - Research Article

Broghammer, A., Krusell, L., Blaise, M., Sauer, J., Sullivan, J. T., Maolanon, N., … Ronson, C. W., … Stougaard, J. (2012). Legume receptors perceive the rhizobial lipochitin oligosaccharide signal molecules by direct binding. PNAS, 109(34), 13859-13864. doi: 10.1073/pnas.1205171109

Journal - Research Article

Vanga, B. R., Butler, R. C., Toth, I. K., Ronson, C. W., & Pitman, A. R. (2012). Inactivation of PbTopo IIIβ causes hyper-excision of the Pathogenicity Island HAI2 resulting in reduced virulence of Pectobacterium atrosepticum. Molecular Microbiology, 84(4), 648-663. doi: 10.1111/j.1365-2958.2012.08050.x

Journal - Research Article

Madsen, L. H., Tirichine, L., Jurkiewicz, A., Sullivan, J. T., Heckmann, A. B., Bek, A. S., Ronson, C. W., … Stougaard, J. (2010). The molecular network governing nodule organogenesis and infection in the model legume Lotus japonicus. Nature Communications, 1. doi: 10.1038/ncomms1009

Journal - Research Article

Noisangiam, R., Nuntagij, A., Pongsilp, N., Boonkerd, N., Denduangboripant, J., Ronson, C., & Teaumroong, N. (2010). Heavy metal tolerant Metalliresistens boonkerdii gen. nov., sp. nov., a new genus in the family Bradyrhizobiaceae isolated from soil in Thailand. Systematic & Applied Microbiology, 33(7), 374-382. doi: 10.1016/j.syapm.2010.06.002

Journal - Research Article

Ott, T., Sullivan, J., James, E. K., Flemetakis, E., Günther, C., Gibon, Y., Ronson, C., & Udvardi, M. (2009). Absence of symbiotic leghemoglobins alters bacteroid and plant cell differentiation during development of Lotus japonicus root nodules. Molecular Plant-Microbe Interactions, 22(7), 800-808. doi: 10.1094/MPMI-22-7-0800

Journal - Research Article

Ramsay, J. P., Sullivan, J. T., Jambari, N., Ortori, C. A., Heeb, S., Williams, P., … Lamont, I. L., & Ronson, C. W. (2009). A LuxRI-family regulatory system controls excision and transfer of the Mesorhizobium loti strain R7A symbiosis island by activating expression of two conserved hypothetical genes. Molecular Microbiology, 73(6), 1141-1155. doi: 10.1111/j.1365-2958.2009.06843.x

Journal - Research Article

Rodpothong, P., Sullivan, J. T., Songsrirote, K., Sumpton, D., Cheung, K. W. J.-T., Thomas-Oates, J., … Ronson, C. W. (2009). Nodulation gene mutants of Mesorhizobium loti R7A—nodZ and nolL mutants have host-specific phenotypes on Lotus spp. Molecular Plant-Microbe Interactions, 22(12), 1546-1554. doi: 10.1094/MPMI-22-12-1546

Journal - Research Article

Carlton, T. M., Sullivan, J. T., Stuart, G. S., Hutt, K., Lamont, I. L., & Ronson, C. W. (2007). Ferrichrome utilization in a mesorhizobial population: Microevolution of a three-locus system. Environmental Microbiology, 9(12), 2923-2932.

Journal - Research Article

Hubber, A. M., Sullivan, J. T., & Ronson, C. W. (2007). Symbiosis-induced cascade regulation of the Mesorhizobium loti R7A VirB/D4 type IV secretion system. Molecular Plant-Microbe Interactions, 20(3), 255-261.

Journal - Research Article

McIntyre, H. J., Davies, H., Hore, T. A., Miller, S. H., Dufour, J.-P., & Ronson, C. W. (2007). Trehalose biosynthesis in Rhizobium leguminosarum bv. trifolii and its role in desiccation tolerance. Applied & Environmental Microbiology, 73(12), 3984-3992.

Journal - Research Article

Miller, S. H., Elliot, R. M., Sullivan, J. T., & Ronson, C. W. (2007). Host-specific regulation of symbiotic nitrogen fixation in Rhizobium leguminosarum biovar trifolii. Microbiology, 153, 3184-3195.

Journal - Research Article

Dodd, S. J., Hurst, M. R. H., Glare, T. R., O'Callaghan, M., & Ronson, C. W. (2006). Occurrence of sep insecticidal toxin complex genes in Serratia spp. and Yersinia frederiksenii. Applied & Environmental Microbiology, 72(10), 6584-6592.

Journal - Research Article

Ramsay, J. P., Sullivan, J. T., Stuart, G. S., Lamont, I. L., & Ronson, C. W. (2006). Excision and transfer of the Mesorhizobium loti R7A symbiosis island requires an integrase IntS, a novel recombination directionality factor RdfS, and a putative relaxase RlxS. Molecular Microbiology, 62(3), 723-734. doi: 10.1111/j.1365-2958.2006.05396.x

Journal - Research Article

Hubber, A., Vergunst, A. C., Sullivan, J. T., Hooykaas, P. J. J., & Ronson, C. W. (2004). Symbiotic phenotypes and translocated effector proteins of the Mesorhizobium loti strain R7A VirB/D4 type IV secretion system. Molecular Microbiology, 54(2), 561-574.

Journal - Research Article

Sullivan, J. T., Trzebiatowski, J. R., Cruickshank, R. W., Gouzy, J., Brown, S. D., Elliot, R. M., Fleetwood, D. J., McCallum, N. G., … Stuart, G. S., Weaver, J. E., Webby, R. J., … Ronson, C. W. (2002). Comparative sequence analysis of the symbiosis island of Mesorhizobium loti strain R7A. Journal of Bacteriology, 184(11), 3086-3095. doi: 10.1128/JB.184.11.3086-3095.2002

Journal - Research Article

Sullivan, J. T., Brown, S. D., Yocum, R. R., & Ronson, C. W. (2001). The bio operon on the acquired symbiosis island of Mesorhizobium sp. strain R7A includes a novel gene involved in pimeloyl-CoA synthesis. Microbiology, 147, 1315-1322.

Journal - Research Article

Hurst, M. R. H., Glare, T. R., Jackson, T. A., & Ronson, C. W. (2000). Plasmid-located pathogenicity determinants of Serratia entomophila, the causal agent of amber disease of grass grub, show similarity to the insecticidal toxins of Photorhabdus luminescens. Journal of Bacteriology, 182(18), 5127-5138.

Journal - Research Article

Kadrmas, J. L., Allaway, D., Studholme, R. E., Sullivan, J. T., Ronson, C. W., Poole, P. R., & Raetz, C. R. (1998). Cloning and overexpression of glycosyltransferases that generate the lipopolysaccharide core of Rhizobium leguminosarum. Journal of Biological Chemistry, 273(41), 26432-26440.

Journal - Research Article

Pryor, H. N., Lowther, W., McIntyre, H. J., & Ronson, C. W. (1998). An inoculant Rhizobium strain for improved establishment and growth of hexaploid Caucasian clover (Trifolium ambiguum). New Zealand Journal of Agricultural Research, 41, 179-189.

Journal - Research Article

Sullivan, J. T., & Ronson, C. W. (1998). Evolution of Rhizobia by acquisition of a 500-kb symbiosis island that integrates into a phe-tRNA gene. PNAS, 95, 5145-5149.

Journal - Research Article

Sullivan, J. T., Eardly, B. D., van Berkum, P., & Ronson, C. W. (1996). Four unnamed species of nonsymbiotic rhizobia isolated from the rhizosphere of Lotus corniculatus. Applied & Environmental Microbiology, 62, 2818-2825.

Journal - Research Article

Perry, B. J., Ferguson, S., Laugraud, A., Wakelin, S. A., Reeve, W., & Ronson, C. W. (2021). Complete genome sequences of Trifolium spp. inoculant strains Rhizobium leguminosarum sv. trifolii TA1 and CC275e: Resources for genomic study of the Rhizobium-Trifolium symbiosis. Molecular Plant-Microbe Interactions, 34(1), 131-134. doi: 10.1094/mpmi-08-20-0220-a

Journal - Research Other

Ramsay, J. P., & Ronson, C. W. (2015). Silencing quorum sensing and ICE mobility through antiactivation and ribosomal frameshifting. Mobile Genetic Elements, 5(6), 103-108. doi: 10.1080/2159256X.2015.1107177

Journal - Research Other

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