I joined the Department in 2018 as Rutherford Discovery Fellow. Prior to that I completed postdoctoral fellowships at ETH Zurich and the University of Auckland. I graduated from Novosibirsk University in 2009 with a PhD in Mathematics.
Currently, I am leading the Biological Data Science lab here at Otago. We develop mathematical and computational methods for genomic data analysis, in close collaboration with our colleagues at the Division of Health Sciences.
Gould, A. L., Zhang, V., Lamberti, L., Jones, E. W., Obadia, B., Korasidis, N., Gavryushkin, A., … Ludington, W. B. (2018). Microbiome interactions shape host fitness. PNAS, 115(51), E11951-E11960. doi: 10.1073/pnas.1809349115
Lienkaemper, C., Lamberti, L., Drain, J., Beerenwinkel, N., & Gavryushkin, A. (2018). The geometry of partial fitness orders and an efficient method for detecting genetic interactions. Journal of Mathematical Biology, 77, 951-970. doi: 10.1007/s00285-018-1237-7
Gavryushkin, A., Whidden, C., & Matsen IV, F. A. (2018). The combinatorics of discrete time-trees: Theory and open problems. Journal of Mathematical Biology, 76(5), 1101-1121. doi: 10.1007/s00285-017-1167-9
Robb, T., Blenkiron, C., Tsai, P., Parker, K., Drummond, A., Black, M., Gavryushkin, A., … Print, C. (2018). Investigating tumour evolution in a single patient with disseminated cancer. Annals of Oncology, 29(Suppl. 9), (pp. ix156). doi: 10.1093/annonc/mdy425.018
Robb, T., Blenkiron, C., Tsai, P., Parker, K., Drummond, A., Black, M., Gavryushkin, A., … Print, C. (2018). Investigating tumour evolution in a single patient with disseminated cancer. Proceedings of the New Zealand Society for Oncology (NZSO) Conference. Retrieved from http://www.nzsoncology.org.nz/