Overview
Genetics and epigenetics of development and human disease. Developmental gene regulation. Developmental genetics of plants. Morphogenesis, regeneration and stem cells.
The lecture course traverses four topics in developmental genetics. The first topic is evolution and development. The second topic is flowering time in plants, which will give you a background in plant developmental genetics. The third topic will focus on chromatin structure and developmental disease, bringing in both epigenetic control of gene expression in development as well as introducing human aspects to developmental genetics. The final topic will focus on how structures are built in vertebrate embryos, how they regenerate if damaged and the concepts and importance of stem cells for future medical applications.
In the labs, you will learn four important techniques - Immunohistochemistry, RNA interference, Agrobacterium-mediated transient expression and in-situ hybridisation - as well as introducing you to two new model organisms: the nematode Caenorhabditis elegans and the chick. The practical course will also focus on teaching you microscopy and imaging, key techniques in developmental genetics.
About this paper
| Paper title | Developmental Genetics |
|---|---|
| Subject | Genetics |
| EFTS | 0.15 |
| Points | 18 points |
| Teaching period | Semester 2 (On campus) |
| Domestic Tuition Fees ( NZD ) | $1,318.20 |
| International Tuition Fees | Tuition Fees for international students are elsewhere on this website. |
- Prerequisite
- GENE 223 and (GENE 221 or GENE 222)
- Schedule C
- Science
- Notes
- This paper includes additional non-streamed lab time that does not appear in the timetable. Please contact the department for further details.
- Eligibility
- Appropriate for students majoring in genetics, other biological and health sciences and molecular biotechnology.
- Contact
- More information link
- Teaching staff
Convener: Associate Professor Caroline Beck (Department of Zoology)
Other teaching staff:
Professor Peter Dearden (Department of Biochemistry)
Professor Julia Horsfield (Department of Pathology)
Dr Gillian MacKay (Genetics Programme)
Associate Professor Lynette Brownfield (Department of Biochemistry)
- Paper Structure
The lecture course is divided into 4 lecture modules with 6 lectures in each module, and there are 4 lab modules.
- Teaching Arrangements
All labs are held in the Genetics Laboratory, Room G09, Biochemistry building.
GENE 314 Labs are held in the first half of semester 2 (GENE 313 labs are held during the second half of semester 2).Lab streams are:
Monday 2pm - 6pm / all day Tuesday or Thursday 2pm - 6pm / all day Friday (note you can attend lectures during the morning sessions).- Textbooks
Lecturers in this course will provide readings where appropriate via the eReserve link on Blackboard, as there are no perfect texts for this paper. However, for a good, well-rounded text to support or extend your learning, we recommend checking out these from the library. They will be available on Reserve from the Science Library:
Principles of Development, 6th ed 2019 by Wolpert, Tickle, Martinez-Arias.
Developmental Biology 12th Ed. 2019 by Gilbert.
Other useful texts include Essential Developmental Biology - 4th Ed 2021 by Slack and earlier editions of the above. "Slack" can be found in the medical school library.
- Graduate Attributes Emphasised
- Global perspective, Interdisciplinary perspective, Lifelong learning, Communication, Critical thinking, Self-motivation, Teamwork.
View more information about Otago's graduate attributes. - Learning Outcomes
Students who successfully complete this paper should develop skills in modern developmental genetics including:
- Development of an understanding of modern approaches to developmental genetics, including the logic of experiments and the inferences drawn from them.
- Development of key skills in imaging and manipulating embryos in genetics experiments.
- Gaining an understanding of the roles of cell signalling processes, epigenetics and morphogens in development.
- To build an understanding of plant and animal development, both experimental and theoretical.
- To develop skills in interpreting developmental genetic experimental data.
Overview
Genetics and epigenetics of development and human disease. Developmental gene regulation. Developmental genetics of plants. Morphogenesis, regeneration and stem cells.
This paper builds on the developmental genetic concepts introduced in GENE 223, deepening your understanding through an integrated approach grounded in functional molecular genetics and the evolution of form and function. The course explores how genes and gene regulatory dynamics control development, diversity, and disease across a range of biological systems.
Over four lecture blocks, you will examine how evolutionary processes shape developmental programmes, how environmentally triggered cues act through complex gene regulatory networks to ensure optimal flowering time in plants, and how chromatin structure and epigenetic mechanisms influence gene expression during development and contribute to developmental disease. We also use limb development to illustrate how complex structures are formed in vertebrate embryos and why it is so difficult to regenerate them as adults, and explore the promise of stem cells in biomedical research.
In the labs, you will explore how we use developmental genetic methods to interrogate gene function. You will learn and apply four important techniques: Immunohistochemistry, to determine protein localisation in developing Drosophila melanogaster embryos, in situ hybridisation to detect mRNA in chicken limb buds and zebrafish embryos, RNA interference to disrupt gene function in the nematode Caenorhabditis elegans, and Agrobacterium transient assays to investigate transcriptional regulation in plant leaves.
Together, these topics provide a broad yet mechanistic view of developmental genetics, connecting molecular function to developmental outcomes in plants, animals, and humans.
About this paper
| Paper title | Developmental Genetics |
|---|---|
| Subject | Genetics |
| EFTS | 0.15 |
| Points | 18 points |
| Teaching period | Semester 2 (On campus) |
| Domestic Tuition Fees | Tuition Fees for 2027 have not yet been set |
| International Tuition Fees | Tuition Fees for international students are elsewhere on this website. |
- Prerequisite
- GENE 223 and (GENE 221 or GENE 222)
- Schedule C
- Science
- Notes
- This paper includes additional non-streamed lab time that does not appear in the timetable. Please contact the department for further details.
- Eligibility
- Appropriate for students majoring in genetics, other biological and health sciences and molecular biotechnology.
- Contact
- More information link
- Teaching staff
Convener: Associate Professor Caroline Beck (Department of Zoology)
Other teaching staff:
- Professor Peter Dearden (Department of Biochemistry)
- Professor Julia Horsfield (Department of Pathology)
- Dr Gillian MacKay (Genetics Programme)
- Associate Professor Lynette Brownfield (Department of Biochemistry)
- Paper Structure
The lecture course is divided into four lecture modules with six lectures in each module, and there are four lab modules.
- Teaching Arrangements
All labs are held in the Genetics Laboratory, Room G09, Biochemistry building
GENE 314 Labs are held in the first half of semester 2 (GENE 313 labs are held during the second half of semester 2).
Lab streams are:
- Monday 2pm - 6pm / all day Tuesday or Thursday 2pm - 6pm / all day Friday (note you can attend lectures during the morning sessions).
- Textbooks
Lecturers in this course will provide readings where appropriate via the eReserve link on Aoroa, as there are no perfect texts for this paper. However, for a good, well-rounded text to support or extend your learning, we recommend checking out these from the library. They will be available on Reserve from the Science Library:
- Principles of Development, 6th ed 2019 by Wolpert, Tickle, Martinez-Arias.
- Developmental Biology 12th Ed. 2019 by Gilbert.
Other useful texts include:
- Essential Developmental Biology - 4th Ed 2021 by Slack and earlier editions of the above.
"Slack" can be found in the medical school library.
- Graduate Attributes Emphasised
- Global perspective, Interdisciplinary perspective, Lifelong learning, Communication, Critical thinking, Self-motivation, Teamwork.
View more information about Otago's graduate attributes. - Learning Outcomes
Students who successfully complete this paper should develop skills in modern developmental genetics including:
- Development of an understanding of modern approaches to developmental genetics, including the logic of experiments and the inferences drawn from them.
- Development of key skills in imaging and manipulating embryos in genetics experiments.
- Gaining an understanding of the roles of cell signalling processes, epigenetics and morphogens in development.
- To build an understanding of plant and animal development, both experimental and theoretical.
- To develop skills in interpreting developmental genetic experimental data.