Profile

Contact Details

Phone: 64 3 479 7865
Email: julian.eaton-rye@otago.ac.nz

University Links

Position: Professor
Department: Department of Biochemistry
Qualifications: BSc(Manc) PhD(Ill)
Research summary: Photosynthesis

Research

Life on our planet is driven by Photosystem II that captures sunlight and extracts electrons from H₂O to reduce CO₂ into sugars while releasing the O₂ we breathe. My laboratory concentrates on structure-function studies of Photosystem II in plants and cyanobacteria. Currently we are working on protein-protein interactions that facilitate sustained water-splitting activity by Photosystem II in response to changing environmental conditions such as fluctuating light levels, temperature and pH. We are also interested in protein factors that are required for the assembly of Photosystem II. Since the sun provides more energy in 1 hour than our entire global energy consumption in 1 year, we are also working on metabolic engineering to couple the harvesting of light by photosynthetic protein complexes to the efficient production of biofuels in cyanobacteria.

Media appearances

Unlocking the Secrets of Photosynthesis (RNZ National, February 2015)
Can Universities save the planet? (New Zealand Herald, October 2014)
Five ideas to improve the world (New Zealand Herald, October 2014)
Nightly interview: Julian Eaton-Rye (Channel 39, January 2014)
Professor Julian Eaton-Rye's Inaugural Professorial Lecture (YouTube, 2014)
Copying plants' ability to split water (ABC Radio National, May 2012)

Publications

Arshad, F., & Eaton-Rye, J. J. (2024). Indirect interactions involving the PsbM or PsbT subunits and the PsbO, PsbU and PsbV proteins stabilize assembly and activity of Photosystem II in Synechocystis sp. PCC 6803. Photosynthesis Research. Advance online publication. doi: 10.1007/s11120-024-01091-9 Journal - Research Article

Sheridan, K. J., Eaton-Rye, J. J., & Summerfield, T. C. (2024). Mutagenesis of Ile184 in the cd-loop of the photosystem II D1 protein modifies acceptor-side function via spontaneous mutation of D1-His252 in Synechocystis sp. PCC 6803. Biochemical & Biophysical Research Communications, 702, 149595. doi: 10.1016/j.bbrc.2024.149595 Journal - Research Article

Forsman, J. A., Sheridan, K. J., Singh, H., Brown, T. J., Vass, I., Summerfield, T. C., & Eaton-Rye, J. J. (2024). The Psb27 assembly factor and histidine-252 of the D1 protein modify energy transfer to photosystem II in Synechocystis sp. PCC 6803. Physiologia Plantarum, 176, e14154. doi: 10.1111/ppl.14154 Journal - Research Article

Sheridan, K. J., Brown, T. J., Eaton-Rye, J. J., & Summerfield, T. C. (2023). Expression of the far-red D1 protein or introduction of conserved far-red D1 residues into Synechocystis sp. PCC 6803 impairs Photosystem II. Physiologia Plantarum, 175, e13997. doi: 10.1111/ppl.13997 Journal - Research Article

Khaing, E. P., & Eaton-Rye, J. J. (2023). Lys264 of the D2 protein performs a dual role in Photosystem II modifying assembly and electron transfer through the quinone–iron acceptor complex. Biochemistry, 62, 2738-2750. doi: 10.1021/acs.biochem.3c00240 Journal - Research Article

2024

Journal - Research Article

2023

Journal - Research Article

2022

Journal - Research Article

Khaing, E. P., Zhong, V., Kodru, S., Vass, I., & Eaton-Rye, J. J. (2022). Tyr244 of the D2 protein is required for correct assembly and operation of the quinone-iron-bicarbonate acceptor complex of Photosystem II. Biochemistry, 61, 1298-1312. doi: 10.1021/acs.biochem.2c00164

Biswas, S., & Eaton-Rye, J. J. (2022). PsbX maintains efficient electron transport in Photosystem II and reduces susceptibility to high light in Synechocystis sp. PCC 6803. Biochimica et Biophysica Acta: Bioenergetics, 1863, 148519. doi: 10.1016/j.bbabio.2021.148519

Choo, P., Forsman, J. A., Hui, L., Khaing, E. P., Summerfield, T. C., & Eaton-Rye, J. J. (2022). The PsbJ protein is required for photosystem II activity in centers lacking the PsbO and PsbV lumenal subunits. Photosynthesis Research, 151, 103-111. doi: 10.1007/s11120-021-00862-y

Journal - Research Other

Ramprakash, B., Lindblad, P., Eaton-Rye, J. J., & Incharoensakdi, A. (2022). Current strategies and future perspectives in biological hydrogen production: A review. Renewable & Sustainable Energy Reviews, 168, 112773. doi: 10.1016/j.rser.2022.112773

Conference Contribution - Published proceedings: Full paper

Asih, D. R., Summerfield, T. C., & Eaton-Rye, J. J. (2022). Exploration of cyanobacteria as bioremediation candidates to reduce phosphorous contamination. IOP Conference Series: Earth & Environmental Science, 1062, 012027. doi: 10.1088/1755-1315/1062/1/012027

Conference Contribution - Published proceedings: Abstract

Brown, T. J., & Eaton-Rye, J. J. (2022). Deletion of RubA in combination with low-molecular-weight proteins disrupts Photosystem II assembly in Synechocystis sp. PC6803. Proceedings of the International Society of Photosynthesis Research (ISPR) 18th International Congress on Photosynthesis Research. (pp. 286). Retrieved from https://www.ps2022.nz

Majhi, B. K., & Eaton-Rye, J. J. (2022). Mutations in cytochrome b₅₅₉ targeting interactions with phosphatidylglycerol impair PS II assembly and increase light sensitivity in Synechocystis sp. PC6803. Proceedings of the International Society of Photosynthesis Research (ISPR) 18th International Congress on Photosynthesis Research. (pp. 283). Retrieved from https://www.ps2022.nz

Zhong, V., & Eaton-Rye, J. J. (2022). Contributions of the DE loop of the D2 protein to the bicarbonate-binding environment of Photosystem II. Proceedings of the International Society of Photosynthesis Research (ISPR) 18th International Congress on Photosynthesis Research. (pp. 277). Retrieved from https://www.ps2022.nz

Craig, O. J. S., & Eaton-Rye, J. J. (2022). Removal of Photosystem II-specific lipoproteins modifies the phenotype of a ΔPsbj deletion strain of Synechocystis sp. PCC 6803. Proceedings of the International Society of Photosynthesis Research (ISPR) 18th International Congress on Photosynthesis Research. (pp. 275). Retrieved from https://www.ps2022.nz

Khaing, E. P., & Eaton-Rye, J. J. (2022). Mutations targeting Arg448 of CP43 disrupt the hydrogen-bond network around the bicarbonate-binding environment of Photosystem II in Synechocystis sp. PCC 6803. Proceedings of the International Society of Photosynthesis Research (ISPR) 18th International Congress on Photosynthesis Research. (pp. 268). Retrieved from https://www.ps2022.nz

Arshad, F., & Eaton-Rye, J. J. (2022). Mutations targeting Phe345 of CP43 result in elevated rates of bicarbonate-supported oxygen evolution and modified PS II fluorescence in Synechocystis sp. PCC 6803. Proceedings of the International Society of Photosynthesis Research (ISPR) 18th International Congress on Photosynthesis Research. (pp. 267). Retrieved from https://www.ps2022.nz

Sheridan, K. J., Eaton-Rye, J. J., & Summerfield, T. C. (2022). Characterisation of Synechocystis sp. PCC 6803 mutants that contain an introduced copy of psbA from a cyanobacterial gene cluster induced under far-red light. Proceedings of the International Society of Photosynthesis Research (ISPR) 18th International Congress on Photosynthesis Research. (pp. 266). Retrieved from https://www.ps2022.nz

Forsman, J. A., Brown, T. J., Sheridan, K. J., Summerfield, T. C., & Eaton-Rye, J. J. (2022). Partitioning of excitation energy between Photosystem II and Photosystem I is affected by mutations targeting the His-252 residue of the D1 subunit of Photosystem II. Proceedings of the International Society of Photosynthesis Research (ISPR) 18th International Congress on Photosynthesis Research. (pp. 247). Retrieved from https://www.ps2022.nz

2021

Journal - Research Article

Forsman, J. A., & Eaton-Rye, J. J. (2021). The hydrophobicity of mutations targeting D1:Val219 modifies formate and diuron binding in the quinone-Fe-acceptor complex of Photosystem II. Physiologia Plantarum, 172, 2217-2225. doi: 10.1111/ppl.13469

Forsman, J. A., & Eaton-Rye, J. J. (2021). The interaction between PsbT and the DE loop of D1 in Photosystem II stabilizes the quinone-iron electron acceptor complex. Biochemistry, 60(1), 53-63. doi: 10.1021/acs.biochem.0c00668

Conference Contribution - Published proceedings: Abstract

Fischer, C., & Eaton-Rye, J. J. (2021). The importance of the Q_B-binding site in photosynthetic oxygen evolution. Proceedings of the 16th Congress of the Federation of Asian & Oceanic Biochemists & Molecular Biologists (FAOBMB). (pp. 187). Retrieved from https://www.faobmb2021.org

2020

Journal - Research Article

Forsman, J. A., Fagerlund, R. D., Biswas, S., Summerfield, T. C., & Eaton-Rye, J. J. (2020). The PsbT protein modifies the bicarbonate-binding environment of Photosystem II. New Zealand Journal of Botany, 58(4), 406-421. doi: 10.1080/0028825X.2020.1772320

Forsman, J. A., & Eaton-Rye, J. J. (2020). The D1:Ser268 residue of Photosystem II contributes to an alternative pathway for Q_B protonation in the absence of bound bicarbonate. FEBS Letters, 594(18), 2953-2964. doi: 10.1002/1873-3468.13880

Sheridan, K. J., Duncan, E. J., Eaton-Rye, J. J., & Summerfield, T. C. (2020). The diversity and distribution of D1 proteins in cyanobacteria. Photosynthesis Research, 145(2), 111-128. doi: 10.1007/s11120-020-00762-7

Khaing, E. P., Zhong, V., & Eaton-Rye, J. J. (2020). An updated system for the targeted mutagenesis of the psbDI:psbC operon in Synechocystis sp. PCC 6803: Mutations targeting Asp460 in CP43 of Photosystem II reduce oxygen-evolving activity and perturb electron transfer in the quinone-Fe-acceptor complex. New Zealand Journal of Botany, 58(4), 389-405. doi: 10.1080/0028825X.2020.1771383

Fagerlund, R. D., Forsman, J. A., Biswas, S., Vass, I., Davies, F. K., Summerfield, T. C., & Eaton-Rye, J. J. (2020). Stabilization of Photosystem II by the PsbT protein impacts photodamage, repair and biogenesis. Biochimica et Biophysica Acta: Bioenergetics, 1861, 148234. doi: 10.1016/j.bbabio.2020.148234

Journal - Research Other

Stirbet, A., Björn, L. O., Shevela, D., Allakhverdiev, S. I., Nonomura, A., Zhu, X.-G., … Eaton-Rye, J. J. (2020). Celebrating the contributions of Govindjee after his retirement: 1999-2020. New Zealand Journal of Botany, 58(4), 422-460. [Review].

Eaton-Rye, J. J., Guieysse, B., Packer, M. A., Summerfield, T. C., & Wood, S. A. (2020). Biology and biotechnological applications of microalgae and photosynthetic prokaryotes: Part 2. New Zealand Journal of Botany, 58(4), 275-277. doi: 10.1080/0028825X.2020.1856887

Journal - Professional & Other Non-Research Articles

Borisova-Mubarakshina, M. M., Tsygankov, A. A., Tomo, T., Allakhverdiev, S. I., Eaton-Rye, J. J., & Govindjee, G. (2020). International conference on “Photosynthesis and Hydrogen Energy Research for Sustainability-2019”: In honor of Tingyun Kuang, Anthony Larkum, Cesare Marchetti and Kimiyuki Satoh. Photosynthesis Research, 146, 5-15. doi: 10.1007/s11120-019-00687-w

Conference Contribution - Published proceedings: Abstract

Arshad, F., & Eaton-Rye, J. (2020). Dynamics of water splitting kinetics by cyanobacteria: Potential source of fuel. Proceedings of the 14th Annual Otago Energy Research Centre (OERC) Symposium: New Energy Futures post COVID-19. Retrieved from https://www.otago.ac.nz/oerc

2019

Journal - Research Article

Forsman, J. A., Vass, I., & Eaton-Rye, J. J. (2019). D1:Glu244 and D1:Tyr246 of the bicarbonate-binding environment of Photosystem II moderate high light susceptibility and electron transfer through the quinone-Fe-acceptor complex. Biochimica et Biophysica Acta: Bioenergetics, 1860, 148054. doi: 10.1016/j.bbabio.2019.07.009

Forsman, J. A., Winter, R. T., & Eaton-Rye, J. J. (2019). An improved system for the targeted mutagenesis of the psbA2 gene in Synechocystis sp. PCC 6803: Mutation of D1-Glu244 to His impairs electron transfer between Q_A and Q_B of Photosystem II. New Zealand Journal of Botany, 59(2), 125-136. doi: 10.1080/0028825X.2019.1617321

Murota, C., Fujiwara, S., Tsujishita, M., Urabe, K., Takayanagi, S., Aoki, M., … Eaton-Rye, J. J., … Tsuzuki, M. (2019). Hyper-resistance to arsenate in the cyanobacterium Synechocystis sp. PCC 6803 is influenced by the differential kinetics of its pst-ABC transporters and external phosphate concentration exposure. Algal Research, 38, 101410. doi: 10.1016/j.algal.2019.101410

Morris, J. N., Kovács, S., Vass, I., Summerfield, T. C., & Eaton-Rye, J. J. (2019). Environmental pH and Glu364 to Gln mutation in the chlorophyll-binding CP47 protein affect redox-active TyrD and charge recombination in Photosystem II. FEBS Letters, 593, 163-174. doi: 10.1002/1873-3468.13307

Journal - Research Other

Borisova-Mubarakshina, M. M., Tsygankov, A. A., Tomo, T., Allakhverdiev, S. I., Eaton-Rye, J. J., & Govindjee, G. (2019). The 10th international conference on “Photosynthesis and Hydrogen Energy Research for sustainability”: A pictorial report in honor of Tingyun Kuang, Anthony Larkum, Cesare Marchetti and Kimiyuki Satoh [Short communication]. International Journal of Hydrogen Energy, 44, 30927-30934. doi: 10.1016/j.ijhydene.2019.09.224

Eaton-Rye, J. J., Guieysse, B., Packer, M. A., Summerfield, T. C., & Wood, S. A. (2019). Biology and biotechnological applications of microalgae and photosynthetic prokaryotes: Part 1. New Zealand Journal of Botany, 57(2), 65-69. doi: 10.1080/0028825X.2019.1625558

Eaton-Rye, J. J. (2019). Govindjee: A lifetime in photosynthesis. Photosynthesis Research, 139, 9-14. doi: 10.1007/s11120-018-0592-y

Conference Contribution - Published proceedings: Abstract

Summerfield, T. C., Morris, J. N., Pearson, T., Sheridan, K., & Eaton-Rye, J. J. (2019). Characterisation of pH sensitive Photosystem II mutants in Synechocystis sp. PCC 6803. In S. Allakhverdiev & I. Naydov (Eds.), Proceedings of the 10th International Photosynthesis and Hydrogen Energy Research for Sustainability Conference. (pp. 141). Retrieved from https://icprs.ru

Sheridan, K. J., Eaton-Rye, J. J., & Summerfield, T. C. (2019). Characterisation of a phylogenetically distinct group of D1 proteins from cyanobacteria. In S. Allakhverdiev & I. Naydov (Eds.), Proceedings of the 10th International Photosynthesis and Hydrogen Energy Research for Sustainability Conference. (pp. 68). Retrieved from https://icprs.ru

Khaing, E. P., Zhong, V., & Eaton-Rye, J. J. (2019). Impairment of Photosystem II assembly and acceptor side electron transfer following mutation of Thr243 and Lys264 of D2 in cyanobacteria. In S. Allakhverdiev & I. Naydov (Eds.), Proceedings of the 10th International Photosynthesis and Hydrogen Energy Research for Sustainability Conference. (pp. 46). Retrieved from https://icprs.ru

Forsman, J. A., Khaing, E. P., Singh, H., & Eaton-Rye, J. J. (2019). Mutation of D1 and D2 residues associated with bicarbonate and bound waters on the acceptor side of PS II impair the quinone-Fe-acceptor complex. In S. Allakhverdiev & I. Naydov (Eds.), Proceedings of the 10th International Photosynthesis and Hydrogen Energy Research for Sustainability Conference. (pp. 65). Retrieved from https://icprs.ru

Forsman, J., & Eaton-Rye, J. (2019). Hydrophobic interactions between the D1 and PsbT subunits of Photosystem II stabilize the iron-quinone acceptor complex. In S. Allakhverdiev & I. Naydov (Eds.), Proceedings of the 10th International Photosynthesis and Hydrogen Energy Research for Sustainability Conference. (pp. 64). Retrieved from https://icprs.ru

2018

Journal - Research Article

Biswas, S., & Eaton-Rye, J. J. (2018). PsbY is required for prevention of photodamage to photosystem II in a PsbM-lacking mutant of Synechocystis sp. PCC 6803. Photosynthetica, 56(1), 200-209. doi: 10.1007/s11099-018-0788-6

Journal - Research Other

Eaton-Rye, J. J. (2018). Foreword. Photosynthetica, 56(1), 1-10. doi: 10.1007/s11099-018-0796-6

Conference Contribution - Published proceedings: Abstract

Morris, J. N., Crawford, T. S., Pearson, T., Lim, E. G., Eaton-Rye, J. J., & Summerfield, T. C. (2018). Investigating genetic instability in cyanobacteria. Proceedings of the New Zealand Microbiological Society (NZMS) New Zealand Society for Biochemistry and Molecular Biology (NZSBMB) Joint Annual Conference: Microbes & Molecules. (pp. 56-57). Retrieved from https://www.nzmsconference.org.nz

Other Research Output

Eaton-Rye, J. (2018, September). Photosystem II assembly and the role of a bound bicarbonate cofactor. Department of Biochemistry, University of Otago, Dunedin, New Zealand. [Department Seminar].

2017

Journal - Research Article

Morris, J. N., Eaton-Rye, J. J., & Summerfield, T. C. (2017). Phenotypic variation in wild-type substrains of the model cyanobacterium Synechocystis sp. PCC 6803. New Zealand Journal of Botany, 55(1), 25-35. doi: 10.1080/0028825X.2016.1231124

Jackson, S. A., & Eaton-Rye, J. J. (2017). Modular growth vessels for the cultivation of the cyanobacterium Synechococcus sp. PCC 7002. New Zealand Journal of Botany, 55(1), 14-24. doi: 10.1080/0028825X.2016.1231123

Journal - Research Other

Eaton-Rye, J. J. (2017). Assembly of the photosystem II membrane-protein complex of oxygenic photosynthesis. Frontiers in Plant Science, 8, 884. doi: 10.3389/fpls.2017.00884

Journal - Professional & Other Non-Research Articles

Packer, M. A., Eaton-Rye, J. J., Summerfield, T. C., Guieysse, B., & Wood, S. A. (2017). Introduction: Proceedings of the 2015 New Zealand symposium on algae and photosynthetic prokaryotes. New Zealand Journal of Botany, 55, 1-4. doi: 10.1080/0028825X.2016.1261908

2016

Journal - Research Article

Morris, J. N., Eaton-Rye, J. J., & Summerfield, T. C. (2016). Environmental pH and the requirement for the extrinsic proteins of Photosystem II in the function of cyanobacterial photosynthesis. Frontiers in Plant Science, 7, 1135. doi: 10.3389/fpls.2016.01135

Crawford, T. S., Eaton-Rye, J. J., & Summerfield, T. C. (2016). Mutation of Gly195 of the ChlH subunit of Mg-chelatase reduces chlorophyll and further disrupts PS II assembly in a Ycf48-deficient strain of Synechocystis sp. PCC 6803. Frontiers in Plant Science, 7, 1060. doi: 10.3389/fpls.2016.01060

Crawford, T. S., Hanning, K. R., Chua, J. P. S., Eaton-Rye, J. J., & Summerfield, T. C. (2016). Comparison of D1´- and D1-containing PS II reaction centre complexes under different environmental conditions in Synechocystis sp. PCC 6803. Plant, Cell & Environment, 39, 1715-1726. doi: 10.1111/pce.12738

Najafpour, M. M., Renger, G., Holyńska, M., Moghaddam, A. N., Aro, E.-M., Carpentier, R., … Eaton-Rye, J. J., … Allakhverdiev, S. I. (2016). Manganese compounds as water-oxidizing catalysts: From the natural water-oxidizing complex to nanosized manganese oxide structures. Chemical Reviews, 116(5), 2886-2936. doi: 10.1021/acs.chemrev.5b00340

2015

Journal - Research Article

Nath, K., Najafpour, M. M., Voloshin, R. A., Balaghi, S. E., Tyystjärvi, E., Timilsina, R., Eaton-Rye, J. J., … Allakhverdiev, S. I. (2015). Photobiological hydrogen production and artificial photosynthesis for clean energy: From bio to nanotechnologies. Photosynthesis Research, 126(2-3), 237-247. doi: 10.1007/s11120-015-0139-4

Najafpour, M. M., Fekete, M., Sedigh, D. J., Aro, E.-M., Carpentier, R., Eaton-Rye, J. J., … Spiccia, L. (2015). Damage management in water-oxidizing catalysts: From photosystem II to nanosized metal oxides. ACS Catalysis, 5(3), 1499-1512. doi: 10.1021/cs5015157

Jackson, S. A., Eaton-Rye, J. J., Bryant, D. A., Posewitz, M. C., & Davies, F. K. (2015). Dynamics of photosynthesis in the glycogen-deficient glgC mutant of Synechococcus sp. PCC 7002. Applied & Environmental Microbiology, 81(18), 6210-6222. doi: 10.1128/aem.01751-15

Jackson, S. A., & Eaton-Rye, J. J. (2015). Characterization of a Synechocystis sp. PCC 6803 double mutant lacking the CyanoP and Ycf48 proteins of Photosystem II. Photosynthesis Research, 124, 217-229. doi: 10.1007/s11120-015-0122-0

Conference Contribution - Published proceedings: Abstract

Davies, F., Jackson, S., Eaton-Rye, J., & Posewitz, M. (2015). Photosynthetic limonene and bisabolene production in wild type and a glycogen-deficient mutant of Synechococcus sp. PCC 7002. Proceedings of the 249th National American Chemical Society (ACS) Spring Meeting. Retrieved from https://www.acs.org

Singh, H., & Eaton-Rye, J. (2015). Photosystem II: Biogenesis, function and repair in Synechocystis sp. PCC 6803. Proceedings of the Otago Energy Research Centre (OERC) Symposium. (pp. 28). Retrieved from http://www.otago.ac.nz/oerc/

Crawford, T., Eaton-Rye, J., & Summerfield, T. (2015). Cyanobacterial biofuels: The next generation. Proceedings of the Otago Energy Research Centre (OERC) Symposium. (pp. 17). Retrieved from http://www.otago.ac.nz/oerc/

2014

Chapter in Book - Research

Najafpour, M. M., Sedigh, D. J., Eaton-Rye, J. J., & Allakhverdiev, S. I. (2014). The water-oxidizing complex in Photosystem II. In S. I. Allakhverdiev, A. B. Rubin & V. A. Shuvalov (Eds.), Contemporary problems of photosynthesis (Vol. 1). (pp. 325-341). Moscow, Russia: Izhevsk Institute of Computer Science.

Hill, R. E., & Eaton-Rye, J. J. (2014). Plasmid Construction by SLIC or Sequence and Ligation-Independent Cloning. In S. Valla & R. Lale (Eds.), DNA cloning and assembly methods: Methods in molecular biology (Vol. 1116). (pp. 25-36). New York: Humana. doi: 10.1007/978-1-62703-764-8_2

Journal - Research Article

Jackson, S. A., Hervey, J. R. D., Dale, A. J., & Eaton-Rye, J. J. (2014). Removal of both Ycf48 and Psb27 in Synechocystis sp. PCC 6803 disrupts Photosystem II assembly and alters Q_Ā oxidation in the mature complex. FEBS Letters, 588(20), 3751-3760. doi: 10.1016/j.febslet.2014.08.024

Lamb, J. J., Hill, R. E., Eaton-Rye, J. J., & Hohmann-Marriott, M. F. (2014). Functional role of PilA in iron acquisition in the Cyanobacterium Synechocystis sp. PCC 6803. PLoS ONE, 9(8), e105761. doi: 10.1371/journal.pone.0105761

Najafpour, M. M., Ghobadi, M. Z., Haghighi, B., Eaton-Rye, J. J., Tomo, T., Shen, J.-R., & Allakhverdiev, S. I. (2014). Nano-sized manganese-calcium cluster in photosystem II. Biochemistry (Moscow), 79(4), 324-336. doi: 10.1134/S0006297914040026

Najafpour, M. M., Isaloo, M. A., Eaton-Rye, J. J., Tomo, T., Nishihara, H., Satoh, K., … Allakhverdiev, S. I. (2014). Water exchange rate in manganese-based water-oxidizing catalysts in photosynthetic systems: From the water-oxidizing complex in photosystem II to nano-sized manganese oxides. Biochimica et Biophysica Acta: Bioenergetics, 1837(9), 1395-1410. doi: 10.1016/j.bbabio.2014.03.008

Mabbitt, P. D., Wilbanks, S. M., & Eaton-Rye, J. J. (2014). Duplication and divergence of the Psb27 subunit of Photosystem II in the green algal lineage. New Zealand Journal of Botany, 52(1), 74-83. doi: 10.1080/0028825X.2013.859629

Mabbitt, P. D., Wilbanks, S. M., & Eaton-Rye, J. J. (2014). Structure and function of the hydrophilic Photosystem II assembly proteins: Psb27, Psb28 and Ycf48. Plant Physiology & Biochemistry, 81, 96-107. doi: 10.1016/j.plaphy.2014.02.013

Luo, H., Jackson, S. A., Fagerlund, R. D., Summerfield, T. C., & Eaton-Rye, J. J. (2014). The importance of the hydrophilic region of PsbL for the plastoquinone electron acceptor complex of Photosystem II. Biochimica et Biophysica Acta: Bioenergetics, 1837(9), 1435-1446. doi: 10.1016/j.bbabio.2014.02.015

Morris, J. N., Crawford, T. S., Jeffs, A., Stockwell, P. A., Eaton-Rye, J. J., & Summerfield, T. C. (2014). Whole genome re-sequencing of two ‘wild-type’ strains of the model cyanobacterium Synechocystis sp. PCC 6803. New Zealand Journal of Botany, 52(1), 36-47. doi: 10.1080/0028825X.2013.846267

Journal - Professional & Other Non-Research Articles

Eaton-Rye, J. J., Packer, M. A., Summerfield, T. C., & Wood, S. A. (2014). Algal and cyanobacterial bioenergy and diversity. New Zealand Journal of Botany, 52(1), 1-5. doi: 10.1080/0028825X.2013.877947

2013

Journal - Research Article

Najafpour, M. M., Rahimi, F., Sedigh, D. J., Carpentier, R., Eaton-Rye, J. J., Shen, J.-R., & Allakhverdiev, S. I. (2013). Gold or silver deposited on layered manganese oxide: A functional model for the water-oxidizing complex in photosystem II. Photosynthesis Research, 117(1-3), 423-429. doi: 10.1007/s11120-013-9899-x

Mabbitt, P. D., Eaton-Rye, J. J., & Wilbanks, S. M. (2013). Mutational analysis of the stability of Psb27 from Synechocystis sp. PCC 6803: Implications for models of Psb27 structure and binding to CP43. European Biophysics Journal, 42, 787-793. doi: 10.1007/s00249-013-0926-9

Najafpour, M. M., Tabrizi, M. A., Haghighi, B., Eaton-Rye, J. J., Carpentier, R., & Allakhverdiev, S. I. (2013). Imidazolium or guanidinium/layered manganese (III, IV) oxide hybrid as a promising structural model for the water-oxidizing complex of Photosystem II for artificial photosynthetic systems. Photosynthesis Research, 117, 413-421. doi: 10.1007/s11120-013-9814-5

Burut-Archanai, S., Eaton-Rye, J. J., Incharoensakdi, A., & Powtongsook, S. (2013). Phosphorus removal in a closed recirculating aquaculture system using the cyanobacterium Synechocystis sp. PCC 6803 strain lacking the SphU regulator of the Pho regulon. Biochemical Engineering Journal, 74, 69-75. doi: 10.1016/j.bej.2013.03.004

Lamb, J. J., Eaton-Rye, J. J., & Hohmann-Marriott, M. F. (2013). A cost-effective solution for the reliable determination of cell numbers of microorganisms in liquid culture. Current Microbiology, 67, 123-129. doi: 10.1007/s00284-013-0340-7

Summerfield, T. C., Crawford, T. S., Young, R. D., Chua, J. P. S., Macdonald, R. L., Sherman, L. A., & Eaton-Rye, J. J. (2013). Environmental pH affects photoautotrophic growth of Synechocystis sp. PCC 6803 strains carrying mutations in the lumenal proteins of PSII. Plant & Cell Physiology, 54(6), 859-874. doi: 10.1093/pcp/pct036

Journal - Research Other

Eaton-Rye, J. J. (2013). Govindjee at 80: More than 50 years of free energy for photosynthesis. Photosynthesis Research, 116(2), 111-144. doi: 10.1007/s11120-013-9921-3

Conference Contribution - Published proceedings: Full paper

Mabbitt, P. D., Rautureau, G. J., Day, C. L., Hinds, M. G., Wilbanks, S. M., & Eaton-Rye, J. J. (2013). Solution structure and physiological requirements for Psb27 in Synechocystis sp. PCC 6803. In T. Kuang, C. Lu & L. Zhang (Eds.), Photosynthesis Research for Food, Fuel and the Future: 15th International Conference on Photosynthesis. (pp. 432-435). Berlin, Germany: Springer. doi: 10.1007/978-3-642-32034-7_90

Summerfield, T. C., Young, R., Sherman, L. A., & Eaton-Rye, J. J. (2013). Characterization of a pH-sensitive Photosystem II mutant in the cyanobacterium Synechocystis sp. PCC 6803. In T. Kuang, C. Lu & L. Zhang (Eds.), Photosynthesis Research for Food, Fuel and the Future: 15th International Conference on Photosynthesis. (pp. 348-352). Berlin, Germany: Springer. doi: 10.1007/978-3-642-32034-7_73

Jackson, S. A., Fagerlund, R. D., Hinds, M. G., Wilbanks, S. M., & Eaton-Rye, J. J. (2013). Structure-function studies of the Photosystem II extrinsic subunits of PsbQ and PsbP from the cyanobacterium Synechocystis sp. PCC 6803. In T. Kuang, C. Lu & L. Zhang (Eds.), Photosynthesis Research for Food, Fuel and the Future: 15th International Conference on Photosynthesis. (pp. 86-90). Berlin, Germany: Springer. doi: 10.1007/978-3-642-32034-7_19

Fagerlund, R. D., Young, R., Luo, H., Bentley, F. K., & Eaton-Rye, J. J. (2013). Removal of the PsbT subunit of Photosystem II in Synechocystis sp. PCC 6803 causes Q_A oxidation to be blocked by dimethyl-p-benzoquinone. In T. Kuang, C. Lu & L. Zhang (Eds.), Photosynthesis Research for Food, Fuel and the Future: 15th International Conference on Photosynthesis. (pp. 79-82). Berlin, Germany: Springer. doi: 10.1007/978-3-642-32034-7_17

Hill, R. E., & Eaton-Rye, J. J. (2013). The polyhydroxybutyrate pathway promoters can drive foreign gene expression under circadian rhythm in Synechocystis sp. PCC 6803. In T. Kuang, C. Lu & L. Zhang (Eds.), Photosynthesis Research for Food, Fuel and the Future: 15th International Conference on Photosynthesis. (pp. 75-78). Berlin, Germany: Springer. doi: 10.1007/978-3-642-32034-7_16

Conference Contribution - Poster Presentation (not in published proceedings)

Summerfield, T., Crawford, T. S., Young, R. D., Chua, J. P. S., Macdonald, R., Sherman, L. A., & Eaton-Rye, J. J. (2013, August). Environmental pH alters growth of Photosystem II mutants in Synechocystis sp. PCC 6803. Poster session presented at the 16th International Congress on Photosynthesis, St. Louis, MO.

Lamb, J. J., Hill, R. E., Eaton-Rye, J. J., & Hohmann-Marriott, M. F. (2013, August). Pili-mediated electron donation to iron oxides in Synechocystis sp. PCC 6803. Poster session presented at the 16th International Congress on Photosynthesis, St. Louis, MO.

Mabbitt, P. D., Wilbanks, S., & Eaton-Rye, J. J. (2013, August). Implications for Psb27-binding to Photosystem II from protein stability measurements and sequence comparisons. Poster session presented at the 16th International Congress on Photosynthesis, St. Louis, MO.

Jackson, S. A., Dale, A. J., & Eaton-Rye, J. J. (2013, August). Exploring the role of the PsbP and Ycf48 proteins of Photosystem II in Synechocystis sp. PCC 6803. Poster session presented at the 16th International Congress on Photosynthesis, St. Louis, MO.

Other Research Output

Eaton-Rye, J. (2013, December). Photosystem II: How plants use sunlight to give us oxygen, food and fuel. University of Otago, Dunedin, New Zealand. [Inaugural Professorial Lecture].

2012

Edited Book - Research

Eaton-Rye, J. J., Tripathy, B. C., & Sharkey, T. D. (Eds.). (2012). Photosynthesis: Plastid biology, energy conversion and carbon assimilation. New York: Springer, 856p. doi: 10.1007/978-94-007-1579-0

Chapter in Book - Research

McConnell, I. L., Eaton-Rye, J. J., & van Rensen, J. J. S. (2012). Regulation of Photosystem II electron transport by bicarbonate. In J. J. Eaton-Rye, B. C. Tripathy & T. D. Sharkey (Eds.), Photosynthesis: Plastid biology, energy conversion and carbon assimilation. (pp. 475-500). New York: Springer. doi: 10.1007/978-94-007-1579-0

Chapter in Book - Other

Eaton-Rye, J. J. (2012). Contributions of Govindjee, 1970-1999. In J. J. Eaton-Rye, B. C. Tripathy & T. D. Sharkey (Eds.), Photosynthesis: Plastid biology, energy conversion and carbon assimilation. New York: Springer. doi: 10.1007/978-94-007-1579-0

Journal - Research Article

Najafpour, M. M., Moghaddam, A. N., Yang, Y. N., Aro, E.-M., Carpentier, R., Eaton-Rye, J. J., … Allakhverdiev, S. I. (2012). Biological water-oxidizing complex: A nano-sized manganese-calcium oxide in a protein environment. Photosynthesis Research, 114(1), 1-13. doi: 10.1007/s11120-012-9778-x

Lamb, J. J., Eaton-Rye, J. J., & Hohmann-Marriott, M. F. (2012). An LED-based fluorometer for chlorophyll quantification in the laboratory and in the field. Photosynthesis Research, 114(1), 59-68. doi: 10.1007/s11120-012-9777-y

Jackson, S. A., Hinds, M. G., & Eaton-Rye, J. J. (2012). Solution structure of CyanoP from Synechocystis sp. PCC 6803: New insights on the structural basis for functional specialization amongst PsbP family proteins. Biochimica et Biophysica Acta: Bioenergetics, 1817(8), 1331-1338. doi: 10.1016/j.bbabio.2012.02.032

Shevela, D., Eaton-Rye, J. J., Shen, J.-R., & Govindjee (2012). Photosystem II and the unique role of bicarbonate: A historical perspective. Biochimica et Biophysica Acta: Bioenergetics, 1817(8), 1134-1151. doi: 10.1016/j.bbabio.2012.04.003

Bricker, T. M., Roose, J. L., Fagerlund, R. D., Frankel, L. K., & Eaton-Rye, J. J. (2012). The extrinsic proteins of Photosystem II. Biochimica et Biophysica Acta: Bioenergetics, 1817(1), 121-142. doi: 10.1016/j.bbabio.2011.07.006

Vos, M. H., Bouzhir-Sima, L., Lambry, J.-C., Luo, H., Eaton-Rye, J. J., Ioanoviciu, A., … Liebl, U. (2012). Ultrafast ligand dynamics in the heme-based GAF sensor domains of the histidine kinases DosS and DosT from Mycobacterium tuberculosis. Biochemistry, 51(1), 159-166. doi: 10.1021/bi201467c

Conference Contribution - Published proceedings: Abstract

Eaton-Rye, J. J., Fagerlund, R. D., Jackson, S. A., & Mabbitt, P. D. (2012). The auxiliary proteins of Photosystem II in the cyanobacterium Synechocystis sp. PCC 6803. Proceedings of the 14th International Symposium on Phototrophic Prokaryotes (ISPP). (pp. 48). Retrieved from http://www.ibmc.up.pt/ispp2012/

Jackson, S., & Eaton-Rye, J. J. (2012). The oxygen evolving centre of photosytem II. Proceedings of the Oxygen Theme Meeting. (pp. 12). Dunedin, New Zealand: University of Otago. Retrieved from https://www.otago.ac.nz/research/otago051864.pdf

Other Research Output

Jackson, S.A., Hinds, M. G., Eaton-Rye, J.J. (2012, June). Solution structure of cyanobacterial PsbP (CyanoP) from Synechocystis sp. PCC 6803. RCSB Protein Databank entry. doi: 10.2210/pdb2LNJ/pdb

2011

Journal - Research Article

Burut-Archanai, S., Eaton-Rye, J. J., & Incharoensakdi, A. (2011). Na⁺-stimulated phosphate uptake system in Synechocystis sp. PCC 6803 with Pst1 as a main transporter. BMC Microbiology, 11, 225. doi: 10.1186/1471-2180-11-225

Nagarajan, A., Winter, R., Eaton-Rye, J., & Burnap, R. (2011). A synthetic DNA and fusion PCR approach to the ectopic expression of high levels of the D1 protein of photosystem II in Synechocystis sp. PCC 6803. Journal of Photochemistry & Photobiology B, 104(1-2), 212-219. doi: 10.1016/j.jphotobiol.2011.02.009

Fagerlund, R. D., & Eaton-Rye, J. J. (2011). The lipoproteins of cyanobacterial photosystem II. Journal of Photochemistry & Photobiology B, 104(1-2), 191-203. doi: 10.1016/j.jphotobiol.2011.01.022

Ehimen, E. A., Sun, Z. F., Carrington, C. G., Birch, E. J., & Eaton-Rye, J. J. (2011). Anaerobic digestion of microalgae residues resulting from the biodiesel production process. Applied Energy, 88(10), 3454-3463. doi: 10.1016/j.apenergy.2010.10.020

Conference Contribution - Verbal presentation and other Conference outputs

Eaton-Rye, J. J. (2011, September). Auxiliary proteins of Photosystem II: Tuning the enzyme for optimal activity. Verbal presentation at the Queenstown Molecular Biology (QMB) Meetings, Queenstown, New Zealand.

2010

Chapter in Book - Research

Eaton-Rye, J. (2010). Construction of gene interruptions and gene deletions in the cyanobacterium Synechocystis sp. strain PCC 6803. In R. Carpentier (Ed.), Photosynthesis Research Protocols. (2nd ed.) (pp. 295-312). NY: Springer. doi: 10.1007/978-1-60761-925-3_22

Journal - Research Article

Jackson, S. A., Fagerlund, R. D., Wilbanks, S. M., & Eaton-Rye, J. J. (2010). Crystal structure of PsbQ from Synechocystis sp. PCC 6803 at 1.8 Å: Implications for binding and function in cyanobacterial photosystem II. Biochemistry, 49(13), 2765-2767. doi: 10.1021/bi100217h

Hohmann-Marriott, M. F., Takizawa, K., Eaton-Rye, J. J., Mets, L., & Minagawa, J. (2010). The redox state of the plastoquinone pool directly modulates minimum chlorophyll fluorescence yield in Chlamydomonas reinhardtii. FEBS Letters, 584, 1021-1026. doi: 10.1016/j.febslet.2010.01.052

Conference Contribution - Published proceedings: Abstract

Crawford, T., Eaton-Rye, J., & Summerfield, T. (2010). Cyanobacterial hydrogen production under low oxygen conditions. Proceedings of the Otago Energy Research Centre (OERC) Symposium: Energy Future. Retrieved from http://www.otago.ac.nz/oerc/

Hohmann-Marriott, M., & Eaton-Rye, J. J. (2010). Biological nanowires for harvesting solar energy. Proceedings of the Otago Energy Research Centre (OERC) Symposium: Energy Future. Retrieved from http://www.otago.ac.nz/oerc/

Fagerlund, R. D., & Eaton-Rye, J. J. (2010). Identifying the roles of protein subunits in solar water-splitting. Proceedings of the Otago Energy Research Centre (OERC) Symposium: Energy Future. Retrieved from http://www.otago.ac.nz/oerc/

2009

Journal - Research Article

Mabbitt, P. D., Rautureau, G. J. P., Day, C. L., Wilbanks, S. M., Eaton-Rye, J. J., & Hinds, M. G. (2009). Solution structure of Psb27 from cyanobacterial photosystem II. Biochemistry, 48(37), 8771-8773. doi: 10.1021/bi901309c

Burut-Archanai, S., Incharoensakdi, A., & Eaton-Rye, J. J. (2009). The extended N-terminal region of SphS is required for detection of external phosphate levels in Synechocystis sp. PCC 6803. Biochemical & Biophysical Research Communications, 378(3), 383-388. doi: 10.1016/j.bbrc.2008.11.012

2008

Journal - Research Article

Luo, H., & Eaton-Rye, J. (2008). Directed mutagenesis of the transmembrane domain of the PsbL subunit of photosystem II in Synechocystis sp. PCC 6803. Photosynthesis Research, 98(1-3), 337-347. doi: 10.1007/s11120-008-9375-1

Bentley, F. K., Luo, H., Dilbeck, P., Burnap, R. L., & Eaton-Rye, J. J. (2008). Effects of inactivating psbM and psbT on photodamage and assembly of photosystem II in Synechocystis sp. PCC 6803. Biochemistry, 47(44), 11637-11646. doi: 10.1021/bi800804h

Conference Contribution - Published proceedings: Full paper

Ehimen, E. A., Carrington, C. G., Sun, Z., & Eaton-Rye, J. (2008). Biodiesel from microalgae: Investigating reaction conditions for in-situ transesterification. Proceedings of the Second International Symposium on Energy from Biomass and Waste. [CD-ROM] Rome: CISA. [Full Paper]

Luo, H., & Eaton-Rye, J. J. (2008). Mutations in CP47 that target putative hydrogen bonds with sulfoquinovosyl-diacylglycerol at the monomer-monomer interface of photosystem II. In J. F. Allen, E. Gantt, J. H. Golbeck & B. Osmond (Eds.), Proceedings of the 14th International Congress on Photosynthesis (Vol. 1): Photosynthesis: Energy from the sun. (pp. 733-735). Dordrecht, The Netherlands: Spinger. [Full Paper]

Bentley, F. K., & Eaton-Rye, J. J. (2008). The effect of removing photosystem II extrinsic proteins on dimer formation and recovery from photodamage in Synechocystis sp. PCC 6803. In J. F. Allen, E. Gantt, J. H. Golbeck & B. Osmond (Eds.), Proceedings of the 14th International Congress on Photosynthesis (Vol. 1): Photosynthesis: Energy from the sun. (pp. 715-717). Dordrecht, The Netherlands: Springer. [Full Paper]

Bentley, F. K., & Eaton-Rye, J. J. (2008). The effect of protein synthesis inhibitors on recovery of photodamaged photosystem II in Synechocystis sp. PCC 6803 lacking PsbM or PsbT. In J. F. Allen, E. Gantt, J. H. Golbeck & B. Osmond (Eds.), Proceedings of the 14th International Congress on Photosynthesis (Vol. 1): Photosynthesis: Energy from the sun. (pp. 711-714). Dordrecht, The Netherlands: Springer. [Full Paper]

Conference Contribution - Poster Presentation (not in published proceedings)

Moore, J., & Eaton-Rye, J. J. (2008, November-December). Inactivation of genes encoding two forms of Psb28 in synechocystis SP. PCC 6803. Poster session presented at the New Zealand Institute of Chemistry, New Zealand Society for Biochemistry and Molecular Biology and the New Zealand Society of Plant Biologists Combined Conference, Dunedin, New Zealand.

Jackson, S. A., & Eaton-Rye, J. J. (2008, November-December). Hydrophilic protin subunits that contribute to water splitting by photosystem II. Poster session presented at the New Zealand Institute of Chemistry, New Zealand Society for Biochemistry and Molecular Biology and the New Zealand Society of Plant Biologists Combined Conference, Dunedin, New Zealand.

Mabbitt, P., Hinds, M. G., Day, C. L., Wilbanks, S. M., & Eaton-Rye, J. J. (2008, November-December). Structural analysis of the PSB27 protein from Synechocystis SP. PCC 6803. Poster session presented at the New Zealand Institute of Chemistry, New Zealand Society for Biochemistry and Molecular Biology and the New Zealand Society of Plant Biologists Combined Conference, Dunedin, New Zealand.

Luo, H., & Eaton-Rye, J. J. (2008, November-December). Functional role of PSBL in Synechocystis SP. PCC 6803. Poster session presented at the New Zealand Institute of Chemistry, New Zealand Society for Biochemistry and Molecular Biology and the New Zealand Society of Plant Biologists Combined Conference, Dunedin, New Zealand.

Gunn, L. H., Bentley, F. K., & Eaton-Rye, J. J. (2008, November-December). ″Extrinsic″ photosystem II proteins influence assembly in a ΔPsbM cyanobacterial mutant. Poster session presented at the New Zealand Institute of Chemistry, New Zealand Society for Biochemistry and Molecular Biology and the New Zealand Society of Plant Biologists Combined Conference, Dunedin, New Zealand.

Young, R. D., & Eaton-Rye, J. J. (2008, November-December). The PsbT subunit of photosystem II (PSII) influences PSII-specific electron transport. Poster session presented at the New Zealand Institute of Chemistry, New Zealand Society for Biochemistry and Molecular Biology and the New Zealand Society of Plant Biologists Combined Conference, Dunedin, New Zealand.

Conference Contribution - Verbal presentation and other Conference outputs

Eaton-Rye, J. J., Bentley, F. K., & Luo, H. (2008, November-December). Roles of the PsbT subunit of photosystem II in the cyanobacterium Synechocystis Sp. PCC 6803. Verbal presentation at the New Zealand Institute of Chemistry, New Zealand Society for Biochemistry and Molecular Biology and the New Zealand Society of Plant Biologists Combined Conference, Dunedin, New Zealand.

2007

Journal - Research Article

Juntarajumnong, W., Hirani, T. A., Simpson, J. M., Incharoensakdi, A., & Eaton-Rye, J. J. (2007). Phosphate sensing in Synechocystis sp. PCC 6803: SphU and the SphS-SphR two-component regulatory system. Archives of Microbiology, 188, 389-402.

Summerfield, T. C., Eaton-Rye, J. J., & Sherman, L. A. (2007). Global gene expression of a ΔPsbO:ΔPsbU mutant and a spontaneous revertant in the cyanobacterium Synechocystis sp. strain PCC 6803. Photosynthesis Research, 94, 265-274.

Juntarajumnong, W., Eaton-Rye, J. J., & Incharoensakdi, A. (2007). Two-component signal transduction in Synechocystis sp. PCC 6803 under phosphate limitation: Role of acetyl phosphate. Journal of Biochemistry & Molecular Biology, 40(5), 708-714.

Eaton-Rye, J. J. (2007). Snapshots of the Govindjee lab from the late 1960s to the late 1990s, and beyond... Photosynthesis Research, 94, 153-178.

Juntarajumnong, W., Incharoensakdi, A., & Eaton-Rye, J. J. (2007). Identification of the start codon for sphS encoding the phosphate-sensing histidine kinase in Synechocystis sp. PCC 6803. Current Microbiology, 55, 142-146.

Eaton-Rye, J. J. (2007). Celebrating Govindjee's 50 years in photosynthesis research and his 75th birthday. Photosynthesis Research, 93, 1-5.

Other - Edited Journal

Eaton-Rye, J. J. (Ed.). (2007). Photosynthesis Research, 94(2-3) Govindjee Special Issue: Part B: Celebrating Govindjee's 50 years in photosynthesis research and his 75th birthday [Guest editor]. [Journal Editor].

Eaton-Rye, J. J. (Ed.). (2007). Photosynthesis Research, 93(1-3) Govindjee Special Issue: Part A: Celebrating Govindjee's 50 years in photosynthesis research and his 75th birthday [Guest editor]. [Journal Editor].

2006

Journal - Research Article

Summerfield, T. C., & Eaton-Rye, J. J. (2006). Pseudocyphellaria crocata, P. neglecta and P. perpetua from the Northern and Southern Hemispheres are a phylogenetic species and share cyanobionts. New Phytologist, 170, 597-607.

2005

Journal - Research Article

Summerfield, T. C., Winter, R. T., & Eaton-Rye, J. J. (2005). Investigation of a requirement for the PsbP-like protein in Synechocystis sp. PCC 6803. Photosynthesis Research, 84, 263-268.

Eaton-Rye, J. J. (2005). Requirements for different combinations of the extrinsic proteins in specific cyanobacterial Photosystem II mutants. Photosynthesis Research, 84, 275-281.

Summerfield, T. C., Shand, J. A., Bentley, F. K., & Eaton-Rye, J. J. (2005). PsbQ (SII1638) in Synechocystis sp. PCC 6803 is required for photosystem II activity in specific mutants and in nutrient-limiting conditions. Biochemistry, 44, 805-815.

Conference Contribution - Published proceedings: Full paper

Selvanesan, L., Eaton-Rye, J. J., & MacRae, E. A. (2005). Verification of real-time PCR differential expression analysis of the SPS gene family from Arabidopsis thaliana. In A. van der Est & D. Bruce (Eds.), Proceedings of the 13th International Congress of Photosynthesis. 2, (pp. 740-742). Lawrence, KS, USA: Alliance Communications Group. [Full Paper]

Woods, M., Parmenter, G., Miskell, J.-A., & Eaton-Rye, J. J. (2005). Photosynthetic electron transport supported by methyl viologen in the obligate shade plants Panax ginseng and Panax quinquefolius. In A. van der Est & D. Bruce (Eds.), Proceedings of the 13th International Congress of Photosynthesis. 1, (pp. 105-107). Lawrence, KS, USA: Alliance Communications Group. [Full Paper]

Summerfield, T. C., & Eaton-Rye, J. J. (2005). Removal of the PsbQ-like protein (SII1638) in nutrient-limiting conditions and in strains lacking PsbO, PsbU, or PsbV. In A. van der Est & D. Bruce (Eds.), Proceedings of the 13th International Congress of Photosynthesis. 1, (pp. 336-338). Lawrence, KS, USA: Alliance Communications Group. [Full Paper]

Veerman, J., Eaton-Rye, J., Mullineaux, C., Vasil'ev, S., & Bruce, D. (2005). When a lumenal protein interferes with stromal side affairs: Synechocystis PCC 6803 mutants lacking psbU. In A. van der Est & D. Bruce (Eds.), Proceedings of the 13th International Congress of Photosynthesis. 1, (pp. 144-146). Lawrence, KS, USA: Alliance Communications Group. [Full Paper]

2004

Chapter in Book - Research

Eaton-Rye, J. J. (2004). The construction of gene knockouts in the Cyanobacterium Synechocystis sp. PCC 6803. In R. Carpentier (Ed.), Methods in molecular biology, vol. 274: Photosynthesis research protocols. (pp. 309-324). Totowa, USA: Humana Press.

Journal - Research Article

Anderson, L. B., Ouellette, A. J. A., Eaton-Rye, J., Maderia, M., MacCoss, M. J., Yates, III, J. R., & Barry, B. A. (2004). Evidence for a post-translational modification, aspartyl aldehyde, in a photosynthetic membrane protein. Journal of the American Chemical Society, 126, 8399-8405.

Li, Z., Andrews, H., Eaton-Rye, J. J., & Burnap, R. L. (2004). In situ effects of mutations of the extrinsic cytochrome c₅₅₀ of photosystem II in Synechocystis sp. PCC6803. Biochemistry, 43, 14161-14170.

2003

Journal - Research Article

Eaton-Rye, J. J., Shand, J. A., & Nicoll, W. S. (2003). pH-dependent photoautotrophic growth of specific photosystem II mutants lacking lumenal extrinsic polypeptides in Synechocystis PCC 6803. FEBS Letters, 543, 148-153.

2002

Journal - Research Article

Clarke, S., Funk, C., Hendry, G., Shand, J. A., Wydrzynski, T., & Eaton-Rye, J. J. (2002). Amino acid deletions in the cytosolic domains of the chlorophyll a-binding protien CP47 slow Q_A^- oxidation and/or prevent the assembly of photosystem II. Plant Molecular Biology, 50, 563-572.

Summerfield, T., Galloway, D. J., & Eaton-Rye, J. J. (2002). Species of cyanolichens from Pseudocyphellaria with indistinguishable ITS sequences have different photobionts. New Phytologist, 155, 121-129.

Miskell, J. A., Parmenter, G., & Eaton-Rye, J. J. (2002). Decreased Hill reaction rates and slow turnover of transitory starch in the obligate shade plant Panax quinquefolius L. (American ginseng). Planta, 215, 969-979.

Kimura, A., Eaton-Rye, J. J., Morita, E., Nishiyama, Y., & Hayashi, H. (2002). Protection of the oxygen-evolving machinery by the extrinsic proteins of photosystem II is essential for development of cellular thermotolerance in Synechocystis sp. PCC 6803. Plant & Cell Physiology, 43, 932-938.

2001

Journal - Research Article

Hirani, T. A., Suzuki, I., Murata, N., Hayashi, H., & Eaton-Rye, J. J. (2001). Characterization of a two-component signal transduction system involved in the induction of alkaline phosphatase under phosphate-limiting conditions in Synechocystis sp.PCC6803. Plant Molecular Biology, 45, 133-144.

Conference Contribution - Published proceedings: Abstract

Summerfield, T. C., Galloway, D. J., & Eaton-Rye, J. J. (2001). The use of psbB for the identification of cyanobacterial lichen symbionts. PS2001 Proceedings of the 12th International Congress on Photosynthesis. (S3-041), (pp. 1-4). Victoria: CSIRO Publishing. [Abstract]

Huang, I., Lynch, D. P., & Eaton-Rye, J. J. (2001). Mutagenesis of Histidine-469 in the photosystem II chlorophyll a-binding protein CP47 in Synechocystis sp. PCC 6803. PS2001 Proceedings 12th International Congress on Photosynthesis. (S22-028), (pp. 1-5). Victoria: CSIRO Publishing. [Abstract]

Eaton-Rye, J. J., & Shand, J. A. (2001). Mutations between Gly-429 and Thr-436 in loop E of the chlorophyll a-binding protein CP47 characterized in the presence or absence of the membrane-extrinsic proteins of the water-oxidizing complex of photosystem II. PS2001 Proceedings 12th International Congress on Photosynthesis. (S13-004), (pp. 1-6). Victoria: CSIRO Publishing. [Abstract]

Eaton-Rye, J. J., & Nicoll, W. S. (2001). Deletions in the lumenal domains of the D1 protein that prevent the assembly of photosystem II in Synechocystis sp. PCC 6803. PS2001 Proceedings 12th International Congress on Photosynthesis. (S13-028), (pp. 1-4). Victoria: CSIRO Publishing. [Abstract]

Miskell, J.-A., Parmenter, G., & Eaton-Rye, J. J. (2001). Photoperiodic changes of soluble sugar levels in Panax ginseng. Proceedings of the 12th International Congress on Photosynthesis. Collingwood, Australia: CSIRO Publishing. [Abstract]

Conference Contribution - Poster Presentation (not in published proceedings)

Miskell, J. A. H., Parmenter, G., & Eaton-Rye, J. J. (2001, August). Light management and carbon metabolism in leaves of obligate shade plants. Poster session presented at the 12th International Congress on Photosynthesis, Brisbane, Australia.

2000

Journal - Research Article

Clarke, S. M., & Eaton-Rye, J. J. (2000). Amino acid deletions in loop C of the chlorophyll a-binding protein CP47 alter the chloride requirement and/or prevent the assembly of photosystem II. Plant Molecular Biology, 44, 591-601.

1999

Journal - Research Article

Clarke, S. M., & Eaton-Rye, J. J. (1999). Mutation of Phe-363 in the photosystem II protein CP47 impairs photoautotrophic growth, alters the chloride requirement, and prevents photosynthesis in the absence of either PSII-O or PSII-V in Synechocystis sp. PCC 6803. Biochemistry, 38, 2707-2715.

1998

Journal - Research Article

Morgan, T. R., Shand, J. A., Clarke, S. M., & Eaton-Rye, J. J. (1998). Specific requirements for cytochrome c-550 and the manganese-stabilizing protein in photoautotrophic strains of Synechocystis sp. PCC 6803 with mutations in the domain Gly-351 to Thr-436 of the chlorophyll-binding protein CP47. Biochemistry, 37(41), 14437-14449.

Conference Contribution - Published proceedings: Abstract

Shand, J. A., & Eaton-Rye, J. J. (1998). Removal of PSII-U in a strain of Synechocystis sp. PCC 6803 lacking the PSII-O protein prevents photosynthesis. In G. Garab (Ed.), Photosynthesis: Mechanisms and Effects. II, (pp. 1455-1458). Netherlands: Kluwer Academic Publishers. [Abstract]

Clarke, S. M., & Eaton-Rye, J. J. (1998). Characterization of the double mutant FF362,363RR in loop E of the photosystem II chlorophyll-binding protein CP47. In G. Garab (Ed.), Photosynthesis: Mechanisms and Effects. II, (pp. 1459-1462). Netherlands: Kluwer Academic Publishers. [Abstract]

1995

Chapter in Book - Research

Clarke, S. M., & Eaton-Rye, J. J. (1995). Oligonucleotide-directed complementation of a lethal deletion within the large hydrophilic domain of CP47. In P. Mathis (Ed.), Photosynthesis: From Light to Biosphere: Proceedings of the Xth International Photosynthesis Congress, Vol. 3. (pp. 469-472). Dordrecht: Kluwer.