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Edited Book - Research

Eaton-Rye, J. J., Tripathy, B. C., & Sharkey, T. D. (Eds.). (2012). Photosynthesis: Plastid biology, energy conversion and carbon assimilation. New York: Springer, 856p. doi: 10.1007/978-94-007-1579-0

Chapter in Book - Research

Morris, J., Liddy, M., & Marshall, C. J. (2024). Ice shell purification of ice-active compounds. In R. Drori & C. A. Stevens (Eds.), Ice binding proteins: Methods and protocols: Methods in molecular biology (Vol. 2730). (pp. 25-34). New York, NY: Humana Press. doi: 10.1007/978-1-0716-3503-2_2

Decourtye-Espiard, L., & Guilford, P. (2023). The chemoprevention of hereditary diffuse gastric cancer. In G. Corso, P. Veronesi & F. Roviello (Eds.), Hereditary gastric and breast cancer syndrome: CDH1: One genotype with multiple phenotypes. (pp. 321-341). Cham, Switzerland: Springer. doi: 10.1007/978-3-031-21317-5_21

Diermeier, S. D., & Leask, M. P. (2023). History and definitions of ncRNAs. In J. Sztuba-Solinska (Ed.), Navigating non-coding RNA: From biogenesis to therapeutic application. (pp. 1-46). London, UK: Academic Press. doi: 10.1016/B978-0-323-90406-3.00002-6

Kavle, R. R., Pritchard, E., Bekhit, A. E.-D. A., Carne, A., & Agyei, D. (2023). Nutrient content and functionalities of edible insects. In S. Grasso & M. Bordiga (Eds.), Edible insects processing for food and feed: From startups to mass production. (pp. 53-84). Boca Raton, FL: CRC Press. doi: 10.1201/9781003165729-4

Nolan, P., Mahmoud, A. E., Kavle, R. R., Carne, A., Bekhit, A. E.-D. A., & Agyei, D. (2023). Edible insects: Protein composition, digestibility, and biofunctionalities. In Z. F. Bhat, J. D. Morton, A. E.-D. A. Bekhit & H. A. R. Suleria (Eds.), Processing technologies and food protein digestion. (pp. 429-494). London, UK: Academic Press. doi: 10.1016/B978-0-323-95052-7.00020-0

Torbati, E., Stuart, G., Krause, K., Brown, C., & Wise, L. (2023). Methods to assess chemokine binding and anti-chemotactic activity of virus proteins. In A. R. Lucas (Ed.), Chemokine-glycosaminoglycan interactions: Methods and protocols: Methods in molecular biology (Vol. 2597). (pp. 217-234). New York, N Y: Humana Press. doi: 10.1007/978-1-0716-2835-5_16

Ahmed, I. A. M., Al-Juhaimi, F. Y., Bhat, Z. F., Carne, A., & Bekhit, A. E.-D. (2022). Non-traditional meat sources, production, nutritional and health aspects, consideration of safety aspects and religious views. In A. E.-D. A. Bekhit, W. W. Riley & M. A. Hussain (Eds.), Alternative proteins: Safety and food security considerations. (pp. 215-270). Boca Raton, FL: CRC Press. doi: 10.1201/9780429299834-8

Ahmmed, M. K., Ahmmed, F., Carne, A., Tian, H. S., & Bekhit, A. E.-D. A. (2022). Fish roe phospholipids and health: Composition, extraction, storage and brain health application. In A. E.-D. A. Bekhit (Ed.), Fish roe: Biochemistry, products, and safety. (pp. 93-142). London, UK: Academic Press. doi: 10.1016/B978-0-12-819893-3.00005-9

Amin, H. F., Carne, A., & Bekhit, A. E.-D. A. (2022). Fish roe products: Middle East perspective. In A. E.-D. A. Bekhit (Ed.), Fish roe: Biochemistry, products, and safety. (pp. 283-310). London, UK: Academic Press. doi: 10.1016/B978-0-12-819893-3.00010-2

Bekhit, A. E.-D. A., Ahmmed, M. K., Sicuro, B., Ghelichi, S., & Carne, A. (2022). Fish roe products: European perspective. In A. E.-D. A. Bekhit (Ed.), Fish roe: Biochemistry, products, and safety. (pp. 311-341). London, UK: Academic Press. doi: 10.1016/B978-0-12-819893-3.00012-6

Bunga, S., Carne, A., & Bekhit, A. E.-D. A. (2022). Composition and nutrition of fish roes. In A. E.-D. A. Bekhit (Ed.), Fish roe: Biochemistry, products, and safety. (pp. 41-92). London, UK: Academic Press. doi: 10.1016/B978-0-12-819893-3.00011-4

Irvani, N., Carne, A., Agyei, D., & Oey, I. (2022). Algae as an alternative source of protein. In A. E.-D. A. Bekhit, W. W. Riley & M. A. Hussain (Eds.), Alternative proteins: Safety and food security considerations. (pp. 65-84). Boca Raton, FL: CRC Press. doi: 10.1201/9780429299834-4

Jamieson, S. A., McMillan, H. D., & Mace, P. D. (2022). Structural and biophysical characterization of Tribbles homolog 1. In A. M. Pyle & D. W. Christianson (Eds.), Methods in enzymology (Vol. 667). (pp. 37-58). Cambridge, MA: Elsevier. doi: 10.1016/bs.mie.2022.03.023

Marsman, J., Day, R. C., & Gimenez, G. (2022). Circular chromosome conformation capture sequencing (4C-Seq ) in primary adherent cells. In J. Horsfield & J. Marsman (Eds.), Chromatin: Methods and protocols: Methods in molecular biology (Vol. 2458). (pp. 301-320). New York, NY: Springer. doi: 10.1007/978-1-0716-2140-0_16

Sarkar, D., & Diermeier, S. D. (2022). LncRNA-chromatin pull-down using biotin-conjugated DNA probes. In J. Horsfield & J. Marsman (Eds.), Chromatin: Methods and protocols: Methods in molecular biology (Vol. 2458). (pp. 345-357). New York, NY: Springer. doi: 10.1007/978-1-0716-2140-0_19

Smith, A. M., Batson, P. B., Achilleos, K., & Tamberg, Y. (2022). Collecting and culturing bryozoans for regenerative studies. In S. Blanchoud & B. Galliot (Eds.), Whole-body regeneration: Methods and protocols: Methods in molecular biology (Vol. 2450). (pp. 151-177). New York, NY: Springer. doi: 10.1007/978-1-0716-2172-1_8

Smith, J., Day, R. C., & Weeks, R. J. (2022). Next-generation bisulfite sequencing for targeted DNA methylation analysis. In J. Horsfield & J. Marsman (Eds.), Chromatin: Methods and protocols: Methods in molecular biology (Vol. 2458). (pp. 47-62). New York, NY: Springer. doi: 10.1007/978-1-0716-2140-0_3

Sollitto, M., Kenny, N. J., Greco, S., Tucci, C. F., Calcino, A. D., & Gerdol, M. (2022). Detecting structural variants and associated gene presence-absence variation phenomena in the genomes of marine organisms. In C. Verde & D. Giordano (Eds.), Marine genomics: Methods and protocols: Methods in molecular biology (Vol. 2498). (pp. 53-76). New York, NY: Springer. doi: 10.1007/978-1-0716-2313-8_4

Tantamacharik, T., Carne, A., Shavandi, A., & Bekhit, A. E.-D. A. (2022). Keratin as an alternative protein in food and nutrition. In A. E.-D. A. Bekhit, W. W. Riley & M. A. Hussain (Eds.), Alternative proteins: Safety and food security considerations. (pp. 173-214). Boca Raton, FL: CRC Press. doi: 10.1201/9780429299834-7

Verachia, W., Bekhit, A. E.-D. A., Carne, A., & Bekhit, A. A. (2022). Fish roe from sea urchin: Composition, processing, and quality aspects. In A. E.-D. A. Bekhit (Ed.), Fish roe: Biochemistry, products, and safety. (pp. 143-181). London, UK: Academic Press. doi: 10.1016/B978-0-12-819893-3.00002-3

Brinkman, F. S. L., Winson, G. L., Done, R. E., Filloux, A., Francis, V. I., Goldberg, J. B., … Lamont, I. L., … Welch, M. (2021). The Pseudomonas aeruginosa whole genome sequence: A 20th anniversary celebration. In R. K. Poole & D. J. Kelly (Eds.), Advances in microbial physiology. (pp. 25-88). London, UK: Elsevier. doi: 10.1016/bs.ampbs.2021.07.001

Gullo, I., Oliveira, C., van der Post, R. S., van Dieren, J. M., Davis, J. L., Bougen-Zhukov, N., Guilford, P., & Carneiro, F. (2021). Updated perspective and directions on hereditary diffuse gastric cancer. In B. Jenkins (Ed.), Research and clinical applications of targeting gastric neoplasms. (pp. 217-258). London, UK: Elsevier. doi: 10.1016/B978-0-323-85563-1.00011-3

Bredow, M., Tomalty, H. E., Graham, L. A., Gruneberg, A. K., Middleton, A. J., Vanderbeld, B., … Walker, V. K. (2020). Isolation and characterization of ice-binding proteins from higher plants. In D. K. Hincha & E. Zuther (Eds.), Plant cold acclimation: Methods and protocols: Methods in molecular biology (Vol. 2156). (2nd ed.) (pp. 303-332). New York, NY: Humana Press. doi: 10.1007/978-1-0716-0660-5_21

Cridge, A. G., Dearden, P. K., & Brownfield, L. R. (2019). The developmental hourglass in the evolution of embryogenesis. In L. N. de la Rosa & G. Müller (Eds.), Evolutionary developmental biology: A reference guide. Cham, Switzerland: Springer. doi: 10.1007/978-3-319-33038-9

Dearden, P. K. (2019). Hourglass or twisted ribbon? In W. Tworzydlo & S. M. Bilinski (Eds.), Evo-Devo: Non-model species in cell developmental biology: Results and problems in cell differentiation. (pp. 21-29). Cham, Switzerland: Springer. doi: 10.1007/978-3-030-23459-1_2

Douglass, A., & Legge, M. (2019). Regulating, surrogacy in New Zealand: Evolving policy and cautious liberalism under the HART Act. In A. Masselot & R. Powell (Eds.), Perspectives on commercial surrogacy in New Zealand: Ethics, law, policy and rights. (pp. 1-24). Christchurch, New Zealand: Centre for Commercial & Corporate Law, University of Canterbury.

Fagerlund, R. D., Ferguson, T. J., Maxwell, H. W. R., Opel-Reading, H. K., Krause, K. L., & Fineran, P. C. (2019). Reconstitution of CRISPR adaptation in vitro and its detection by PCR. In S. Bailey (Ed.), Methods in enzymology (Vol. 616: CRISPR-Cas enzymes). (pp. 411-433). Cambridge, MA: Academic Press. doi: 10.1016/bs.mie.2018.10.024

Maschio, L., Parnell, A. E., Lees, N. R., Willis, C. L., Schaffitzel, C., Stach, J. E. M., & Race, P. R. (2019). Cloning, expression, and purification of intact polyketide synthase modules. In C. Schmidt-Dannert & M. B. Quin (Eds.), Methods in enzymology: (Vol. 617): Metabolons and supramolecular enzyme assemblies. (pp. 63-82). Cambridge, MA: Academic Press. doi: 10.1016/bs.mie.2018.12.018

Shavandi, A., Hou, Y., Carne, A., McConnell, M., & Bekhit, A. E.-D. A. (2019). Marine waste utilization as a source of functional and health compounds. In F. Toldrá (Ed.), Advances in food and nutrition research (Vol. 87). (pp. 187-254). Cambridge, MA: Elsevier. doi: 10.1016/bs.afnr.2018.08.001

Basak, I., & Møller, S. G. (2018). Plant thermotolerance proteins, misfolded proteins, and neurodegenerative diseases. In A. R. Kermode & L. Jiang (Eds.), Molecular pharming: Applications, challenges, and emerging areas. (pp. 457-474). Hoboken, NJ: John Wiley & Sons. doi: 10.1002/9781118801512.ch18

Burrow, K., Young, W., Carne, A., McConnell, M., & Bekhit, A. E.-D. (2018). Interactions of milk proteins with minerals. In G. W. Smithers (Ed.), Reference module in food science. Elsevier. doi: 10.1016/B978-0-08-100596-5.22489-X

Ehrhardt, M. K. G., Warring, S. L., & Gerth, M. L. (2018). Screening chemoreceptor-ligand interactions by high-throughput thermal-shift assays. In M. D. Manson (Ed.), Bacterial chemosensing: Methods and protocols: Methods in molecular biology (Vol. 1729). (pp. 281-290). New York, NY: Humana Press. doi: 10.1007/978-1-4939-7577-8_22

Mungure, T. E., Bekhit, A. E.-D., Carne, A., Roohinejad, S., Mallikarjunan, K., & Birch, J. (2018). Application of HPLC in characterisation of triacylglycerols and detection of adulteration in cold pressed seed oils. In G. W. Smithers (Ed.), Reference module in food science. Elsevier. doi: 10.1016/B978-0-08-100596-5.22526-2

Tantamacharik, T., Carne, A., Agyei, D., Birch, J., & Bekhit, A. E.-D. A. (2018). Use of plant proteolytic enzymes for meat processing. In M. G. Guevara & G. R. Daleo (Eds.), Biotechnological applications of plant proteolytic enzymes. (pp. 43-67). Cham, Switzerland: Springer. doi: 10.1007/978-3-319-97132-2_3

Weller, J. L., & Macknight, R. C. (2018). Functional genomics and flowering time in Medicago truncatula: An overview. In L. A. Cañas & J. P. Beltrán (Eds.), Functional genomics in Medicago truncatula: Methods and protocols: Methods in molecular biology (Vol. 1822). (pp. 261-271). New York, NY: Humana Press. doi: 10.1007/978-1-4939-8633-0_17

Bekhit, A. E.-D. A., Carne, A., Ryder, K., Ha, M., & Kong, L. (2017). Manipulation of meat structure: Use of exogenous proteases. In A. E.-D. A. Bekhit (Ed.), Advances in meat processing technology. (pp. 65-120). Boca Raton, FL: CRC Press. doi: 10.1201/9781315371955

Bekhit, A. E.-D. A., Suwandy, V., Carne, A., Mohamed Ahmed, I. A., & Wang, Z. (2017). Manipulation of meat quality: Electrical stimulation and pulsed electric field. In A. E.-D. A. Bekhit (Ed.), Advances in meat processing technology. (pp. 121-168). Boca Raton, FL: CRC Press. doi: 10.1201/9781315371955

Chatterjee, A., Rodger, E. J., Morison, I. M., Eccles, M. R., & Stockwell, P. A. (2017). Tools and strategies for analysis of genome-wide and gene-specific DNA methylation patterns. In G. J. Seymour, M. P. Cullinan & N. C. K. Heng (Eds.), Oral biology: Molecular techniques and applications: Methods in molecular biology (Vol. 1537). (2nd ed.) (pp. 249-277). New York, NY: Springer. doi: 10.1007/978-1-4939-6685-1_15

Chatterjee, A., Rodger, E. J., Stockwell, P. A., Le Mée, G., & Morison, I. M. (2017). Generating multiple base-resolution DNA methylomes using reduced representation bisulfite sequencing. In G. J. Seymour, M. P. Cullinan & N. C. K. Heng (Eds.), Oral biology: Molecular techniques and applications: Methods in molecular biology (Vol. 1537). (2nd ed.) (pp. 279-298). New York, NY: Springer. doi: 10.1007/978-1-4939-6685-1_16

Chia, J., Burrow, K., Carne, A., McConnell, M., Samuelsson, L., Day, L., … Bekhit, A. E.-D. A. (2017). Minerals in sheep milk. In R. R. Watson, R. J. Collier & V. R. Preedy (Eds.), Nutrients in dairy and their implications for health and disease. (pp. 345-362). London, UK: Elsevier. doi: 10.1016/B978-0-12-809762-5.00027-9

Chisnall, M., & Macknight, R. (2017). Importance of Vitamin C in human health and disease. In M. A. Hossain, S. Munné-Bosch, D. J. Burritt, P. Diaz-Vivancos, M. Fujita & A. Lorence (Eds.), Ascorbic Acid in Plant Growth, Development and Stress Tolerance. (pp. 491-501). Cham, Switzerland: Springer. doi: 10.1007/978-3-319-74057-7

Cridge, A., Harrop, T., Lovegrove, M., Remnant, E., & Dearden, P. (2017). Nutrition and epigenetic change in insects: Evidence and implications. In H. Verlinden (Ed.), Advances in insect physiology (Vol. 53): Insect epigenetics. (pp. 31-54). London, UK: Academic Press. doi: 10.1016/bs.aiip.2017.06.001

Fitzgerald, R. P., & Legge, M. (2017). Ethics for embryologists. In R. M. Shaw (Ed.), Bioethics beyond altruism: Donating and transforming human biological materials. (pp. 141-164). Cham, Switzerland: Palgrave Macmillan. doi: 10.1007/978-3-319-55532-4_6

Peters, B., Aidley, J., Cadzow, M., Twell, D., & Brownfield, L. (2017). Identification of cis-regulatory modules that function in the male germline of flowering plants. In A. Schmidt (Ed.), Plant germline development: Methods and protocols: Methods in molecular biology (Vol. 1669). (pp. 275-293). Springer. doi: 10.1007/978-1-4939-7286-9_22

Twell, D., & Brownfield, L. (2017). Analysis of fluorescent reporter activity in the male germline during pollen development by confocal microscopy. In A. Schmidt (Ed.), Plant germline development: Methods and protocols: Methods in molecular biology (Vol. 1669). (pp. 67-75). Springer. doi: 10.1007/978-1-4939-7286-9_6

Weijman, J. F., Riedl, S. J., & Mace, P. D. (2017). Structural studies of ERK2 protein complexes. In G. Jimenez (Ed.), ERK signaling: Methods and protocols: Methods in molecular biology (Vol: 1487). (pp. 53-63). New York, NY: Springer. doi: 10.1007/978-1-4939-6424-6_4

Brownfield, L., & Twell, D. (2016). Plant Reproduction. In eLS. Chichester, UK: John Wiley & Sons. doi: 10.1002/9780470015902.a0002046.pub2

Reid, S., Chan, L. C. L., Matindoost, L., Pushparajan, C., & Visnovsky, G. (2016). Cell culture for production of insecticidal viruses. In T. R. Glare & M. E. Moran-Diez (Eds.), Microbial-based biopesticides: Methods and protocols: Methods in molecular biology (Vol. 1477). (pp. 95-117). New York: Springer. doi: 10.1007/978-1-4939-6367-6_9

Biswas, A., Fineran, P. C., & Brown, C. M. (2015). Computational detection of CRISPR/crRNA targets. In M. Lundgren, E. Charpentier & P. C. Fineran (Eds.), CRISPR: Methods in molecular biology (Vol. 1311). (pp. 77-89). New York, NY: Humana Press. doi: 10.1007/978-1-4939-2687-9_5

Empson, R. M., Tantirigama, M. L. S., Oswald, M. J., Hughes, S. M., & Knöpfel, T. (2015). Combined immunochemistry and live imaging of fluorescent protein expressing neurons in mouse brain. In A. Merighi & L. Lossi (Eds.), Immunocytochemistry and related techniques. (pp. 357-373). New York: Springer. doi: 10.1007/978-1-4939-2313-7_19

Poulter, R. T. M., & Butler, M. I. (2015). Tyrosine recombinase retrotransposons and transposons. In N. L. Craig, M. Chandler, M. Gellert, A. M. Lambowitz, P. A. Rice & S. B. Sandmeyer (Eds.), Mobile DNA III. (pp. 1271-1291). Washington, DC: ASM Press.

Copp, J. N., Hanson-Manful, P., Ackerley, D. F., & Patrick, W. M. (2014). Error-prone PCR and effective generation of gene variant libraries for directed evolution. In E. M. J. Gillam, J. N. Copp & D. F. Ackerley (Eds.), Directed evolution library creation: Methods and protocols. (2nd ed.) (pp. 3-22). New York: Springer. doi: 10.1007/978-1-4939-1053-3_16

Day, R., & Macknight, R. (2014). Screening for imprinted genes using high-resolution melting analysis of PCR amplicons. In C. Spillane & P. C. McKeown (Eds.), Plant epigentics and epigenomics: Methods and protocols. (pp. 71-83). Humana Press. doi: 10.1007/978-1-62703-773-0_5

Hill, R. E., & Eaton-Rye, J. J. (2014). Plasmid Construction by SLIC or Sequence and Ligation-Independent Cloning. In S. Valla & R. Lale (Eds.), DNA cloning and assembly methods: Methods in molecular biology (Vol. 1116). (pp. 25-36). New York: Humana. doi: 10.1007/978-1-62703-764-8_2

Mace, P. D., Riedl, S. J., & Salvesen, G. S. (2014). Caspase enzymology and activation mechanisms. In A. Ashkenasi, J. Yuan & J. A. Wells (Eds.), Methods in enzymology: Regulated cell death Part A: Apoptotic mechanisms (Vol.544). (pp. 161-178). San Diego, CA: Academic Press. doi: 10.1016/b978-0-12-417158-9.00007-8

Middleton, A. J., Budhidarmo, R., & Day, C. L. (2014). Use of E2~ubiquitin conjugates for the characterization of ubiquitin transfer by RING E3 ligases such as the inhibitor of apoptosis proteins. In A. Ashkenazi, J. A. Wells & J. Yuan (Eds.), Methods in enzymology (Vol. 545). (pp. 243-263). San Diego, CA: Elsevier. doi: 10.1016/B978-0-12-801430-1.00010-X

Middleton, A. J., Vanderbeld, B., Bredow, M., Tomalty, H., Davies, P. L., & Walker, V. K. (2014). Isolation and characterization of ice-binding proteins from higher plants. In D. K. Hincha & E. Zuther (Eds.), Plant cold acclimation: Methods and Protocols (Methods in Molecular Biology: Vol. 1166). (pp. 255-277). New York: Springer. doi: 10.1007/978-1-4939-0844-8_19

Najafpour, M. M., Sedigh, D. J., Eaton-Rye, J. J., & Allakhverdiev, S. I. (2014). The water-oxidizing complex in Photosystem II. In S. I. Allakhverdiev, A. B. Rubin & V. A. Shuvalov (Eds.), Contemporary problems of photosynthesis (Vol. 1). (pp. 325-341). Moscow, Russia: Izhevsk Institute of Computer Science.

Osborne, A. J., Duncan, E. J., Cridge, A. G., & Dearden, P. K. (2014). Epigenetics and the maternal germline. In T. Tollefsbol (Ed.), Transgenerational epigenetics: Evidence and debate. (pp. 27-41). London, UK: Academic Press. doi: 10.1016/B978-0-12-405944-3.00004-0

Patrick, W. M., & Gerth, M. L. (2014). ITCHY: Incremental Truncation for the Creation of Hybrid Enzymes. In E. M. J. Gillam, J. N. Copp & D. F. Ackerley (Eds.), Directed evolution library creation: Methods and protocols. (2nd ed.) (pp. 225-244). New York: Springer. doi: 10.1007/978-1-4939-1053-3_16

Sharpe, M. L., Hastings, J. W., & Krause, K. L. (2014). Luciferases and light-emitting accessory proteins: Structural biology. In eLS. Chichester, UK: John Wiley & Sons. doi: 10.1002/9780470015902.a0003064.pub2

Stevens, S. G., & Brown, C. M. (2014). Bioinformatic methods to discover Cis-regulatory elements in mRNAs. In N. K. Kasabov (Ed.), Springer handbook of bio-/neuro-informatics. (pp. 151-169). Dordrecht, The Netherlands: Springer. doi: 10.1007/978-3-642-30574-0_10

Bekhit, A. E., Hopkins, D. L., Farouk, M. M., & Carne, A. (2013). Interventions to improve the tenderness of fresh meat: A future prospect for camel meat research. In I. T. Kadim, O. Mahgoub, B. Faye & M. Farouk (Eds.), Camel meat and meat products. (pp. 153-185). Oxford, UK: CABI.

Hanson-Manful, P., & Patrick, W. M. (2013). Construction and analysis of randomized protein-encoding libraries using error-prone PCR. In J. A. Gerrard (Ed.), Protein nanotechnology: Protocols, instrumentation, and applications. (2nd ed.) (pp. 251-267). Humana Press. doi: 10.1007/978-1-62703-354-1-15

Merriman, T. R., & Flynn, T. J. (2013). Molecular genetics of hyperuricaemia and gout. In eLS. Chichester: John Wiley & Sons. doi: 10.1002/9780470015902.a0025153

Merriman, T. R., & McKinney, C. (2013). An update on the genetic causes of hyperuricemia and gout. In N. Dalbeth, F. Perez-Ruiz & N. Schlesinger (Eds.), Gout. (pp. 54-69). London, UK: Future Medicine. doi: 10.2217/ebo.12.256

Picard, K., Lee, R., Hellens, R., & Macknight, R. (2013). Transient gene expression in Medicago truncatula leaves via agroinfiltration. In R. J. Rose (Ed.), Legume genomics: Methods and protocols: Methods in molecular biology (Vol. 1069). (pp. 215-226). New York: Springer. doi: 10.1007/978-1-62703-613-9_15

Macknight, R. C., Herridge, R. P., & Day, R. C. (2012). Using transcriptomics to reveal gene networks of seed development in Arabidopsis. In G. K. Agrawal & R. Rakwal (Eds.), Seed development: OMICS technologies toward Improvement of seed quality and crop yield. (pp. 99-110). Dordrecht, The Netherlands: Springer. doi: 10.1007/978-94-007-4749-4_6

McConnell, I. L., Eaton-Rye, J. J., & van Rensen, J. J. S. (2012). Regulation of Photosystem II electron transport by bicarbonate. In J. J. Eaton-Rye, B. C. Tripathy & T. D. Sharkey (Eds.), Photosynthesis: Plastid biology, energy conversion and carbon assimilation. (pp. 475-500). New York: Springer. doi: 10.1007/978-94-007-1579-0

Collins, L. J., Schönfeld, B., & Chen, X. S. (2011). The epigenetics of non-coding RNA. In T. Tollefsbol (Ed.), Handbook of epigenetics: The new molecular and medical genetics. (pp. 49-61). London: Academic Press. doi: 10.1016/B978-0-12-375709-8.00004-6

Daly, T., Chen, X. S., & Penny, D. (2011). How old are RNA networks? In L. J. Collins (Ed.), RNA infrastructure and networks: Advances in experimental medicine and biology (Vol. 722). (pp. 255-273). New York: Springer Science+Business Media. doi: 10.1007/978-1-4614-0332-6

Day, R. C. (2010). Laser microdissection of paraffin-embedded plant tissues for transcript profiling. In L. Hennig & C. Köhler (Eds.), Plant developmental biology: Methods and protocols. (pp. 321-346). New York: Spinger. doi: 10.1007/978-1-60761-765-5_22

Dearden, P. K., Duncan, E. J., & Wilson, M. J. (2010). The honeybee Apis mellifera. In Emerging model organisms: A laboratory manual (Vol. 2). (pp. 223-246). Cold Spring Harbor, NY: Cold Spring Harbor Press.

Eaton-Rye, J. (2010). Construction of gene interruptions and gene deletions in the cyanobacterium Synechocystis sp. strain PCC 6803. In R. Carpentier (Ed.), Photosynthesis Research Protocols. (2nd ed.) (pp. 295-312). NY: Springer. doi: 10.1007/978-1-60761-925-3_22

von Zychlinski, A., & Gruissem, W. (2009). Preparation and analysis of plastid proteomes by 2DE. In D. Sheehan & R. Tyther (Eds.), Two-dimensional electrophoresis protocols: Methods in molecular biology (Vol. 519). (pp. 205-220). Totowa, NJ: Humana Press. doi: 10.1007/978-1-59745-281-6_13

von Zychilinski, A., Reiland, S., Gruissem, W., & Baginsky, S. (2008). Etioplast. In G. K. Agrawal & R. Rakwal (Eds.), Plant Proteomics: Technologies, strategies, and applications. (pp. 351-360). Hoboken, NJ: John Wiley & Sons. doi: 10.1002/9780470369630.ch24

Hastings, J. W., & Krause, K. L. (2006). Luciferases and light-emitting accessory proteins: Structural biology. In Encyclopedia of Life Sciences. New York: John Wiley & Sons. doi: 10.1038/npg.els.0003064

Chapter in Book - Other

Tate, W. P., & Marshall, C. J. (2018). Post-dormancy transcription and translation in the brine shrimp. In R. A. Browne, P. Sorgeloos & C. N. A. Trotman (Eds.), Artemia biology. (pp. 21-36). Boca Raton, FL: Taylor & Francis. doi: 10.1201/9781351069892

Eaton-Rye, J. J. (2012). Contributions of Govindjee, 1970-1999. In J. J. Eaton-Rye, B. C. Tripathy & T. D. Sharkey (Eds.), Photosynthesis: Plastid biology, energy conversion and carbon assimilation. New York: Springer. doi: 10.1007/978-94-007-1579-0

Hastings, J. W., & Krause, K. L. (2007). Luciferases and light-emitting accessory proteins: Structural biology. In Encyclopedia of Life Sciences. New York: John Wiley & Sons.

Journal - Research Article

Arshad, F., & Eaton-Rye, J. J. (2024). Indirect interactions involving the PsbM or PsbT subunits and the PsbO, PsbU and PsbV proteins stabilize assembly and activity of Photosystem II in Synechocystis sp. PCC 6803. Photosynthesis Research. Advance online publication. doi: 10.1007/s11120-024-01091-9

Barzak, F. M., Lu, A., Geltzeiler, A. R., Ledgerwood, E. C., Chung, W. K., & Day, C. L. (2024). A novel RNF125 variant associated with Tenorio syndrome alters ubiquitin chain binding. Clinical Genetics, 105, 254-261. doi: 10.1111/cge.14457

Bilton, T. P., Sharma, S. K., Schofield, M. R., Black, M. A., Jacobs, J. M. E., Bryan, G. J., & Dodds, K. G. (2024). Construction of relatedness matrices in autopolyploid populations using low-depth high-throughput sequencing data. Theoretical & Applied Genetics, 137, 64. doi: 10.1007/s00122-024-04568-2

Chin, T. C., Wilbanks, S. M., & Ledgerwood, E. C. (2024). Altered conformational dynamics contribute to species-specific effects of cytochrome c mutations on caspase activation. Journal of Biological Inorganic Chemistry. Advance online publication. doi: 10.1007/s00775-024-02044-2

Chinzowu, T., Chyou, T.-y., & Nishtala, P. S. (2024). Antibiotic-associated acute kidney injury among older adults: A case-crossover study. Clinical Drug Investigation. Advance online publication. doi: 10.1007/s40261-023-01339-7

Currie, M. J., Davies, J. S., Scalise, M., Gulati, A., Wright, J. D., Newton-Vesty, M. C., … Mace, P. D., … North, R. A. (2024). Structural and biophysical analysis of a Haemophilus influenzae tripartite ATP-independent periplasmic (TRAP) transporter. eLIFE, 13, RP92307. doi: 10.7554/eLife.92307

Forsman, J. A., Sheridan, K. J., Singh, H., Brown, T. J., Vass, I., Summerfield, T. C., & Eaton-Rye, J. J. (2024). The Psb27 assembly factor and histidine-252 of the D1 protein modify energy transfer to photosystem II in Synechocystis sp. PCC 6803. Physiologia Plantarum, 176, e14154. doi: 10.1111/ppl.14154

Garelja, M. L., Alexander, T. I., Bennie, A., Nimick, M., Petersen, J., Walker, C. S., & Hay, D. L. (2024). Pharmacological characterisation of erenumab, Aimovig, at two calcitonin gene-related peptide responsive receptors. British Journal of Pharmacology, 181, 142-161. doi: 10.1111/bph.16218

Inwood, S. N., Harrop, T. W. R., Shields, M. W., Goldson, S. L., & Dearden, P. K. (2024). Immune system modulation & virus transmission during parasitism identified by multi-species transcriptomics of a declining insect biocontrol system. BMC Genomics, 25, 311. doi: 10.1186/s12864-024-10215-3

Jo, J., Upadhyay, T., Woods, E. C., Park, K. W., Pedowitz, N. J., Jaworek-Korjakowska, J., … Fellner, M., & Bogyo, M. (2024). Development of oxadiazolone activity-based probes targeting FphE for specific detection of Staphylococcus aureus infections. Journal of the American Chemical Society. Advance online publication. doi: 10.1021/jacs.3c13974

Jones, L. M., & Legge, M. (2024). Can the use of triglyceride to glucose and triglyceride to high density lipoprotein ratios indicate metabolic syndrome in the spinal cord injured male? New Zealand Journal of Medical Laboratory Science, 78(1), 31-33.

McCallum-Loudeac, J., Moody, E., Williams, J., Johnstone, G., Sircombe, K. J., Clarkson, A. N., & Wilson, M. J. (2024). Deletion of a conserved genomic region associated with adolescent idiopathic scoliosis leads to vertebral rotation in mice. Human Molecular Genetics. Advance online publication. doi: 10.1093/hmg/ddae011

Moore, M. K., Jones, G. T., McCormick, S., Williams, M. J. A., & Coffey, S. (2024). Association between lipoprotein(a), LPA genetic risk score, aortic valve disease, and subsequent major adverse cardiovascular events. European Journal of Preventive Cardiology. Advance online publication. doi: 10.1093/eurjpc/zwae100

Rajchakit, U., Lamba, S., Wang, K., Lyons, N., Lu, J., Swift, S., Pletzer, D., & Sarojini, V. (2024). Size-controlled synthesis of gold nanoparticles tethering antimicrobial peptides with potent broad-spectrum antimicrobial and antibiofilm activities. Molecular Pharmaceutics. Advance online publication. doi: 10.1021/acs.molpharmaceut.3c00734

Schoch, K., Ruegg, M. S. G., Fellows, B. J., Cao, J., Uhrig, S., Einsele-Scholz, S., … Hawarden, S. R. A., … Brown, C. M., … Bicknell, L. S. (2024). A second hotspot for pathogenic exon-skipping variants in CDC45. European Journal of Human Genetics. Advance online publication. doi: 10.1038/s41431-024-01583-1

Shafaei Pishabad, Z., & Ledgerwood, E. C. (2024). The Y49H cytochrome c variant enhances megakaryocytic maturation of K-562 cells. Biochimica et Biophysica Acta: Molecular Basis of Disease, 1870(5), 167134. doi: 10.1016/j.bbadis.2024.167134

Sheridan, K. J., Eaton-Rye, J. J., & Summerfield, T. C. (2024). Mutagenesis of Ile184 in the cd-loop of the photosystem II D1 protein modifies acceptor-side function via spontaneous mutation of D1-His252 in Synechocystis sp. PCC 6803. Biochemical & Biophysical Research Communications, 702, 149595. doi: 10.1016/j.bbrc.2024.149595

Sitter, L., Schoof, M., Glare, T. R., Cox, M. P., Fineran, P. C., Gardner, P. P., & Hurst, M. R. H. (2024). Serratia-based toxin cluster elements are associated with a type I fimbria. MicrobiologyOpen, 13, e1395. doi: 10.1002/mbo3.1395

Swamynathan, M. M., Mathew, G., Aziz, A. A., Gordon, C., Hillowe, A., Wang, H., … Diermeier, S. D., … Trotman, L. C. (2024). FABP5 inhibition against PTEN-mutant therapy resistant prostate cancer. Cancers, 16, 60. doi: 10.3390/cancers16010060

Achilleos, K., & Smith, A. M. (2023). Proof of concept for measuring growth of shelf marine calcifiers: 'A Bryozoan odyssey'. Marine & Freshwater Research, 74(14), 1262-1273. doi: 10.1071/MF23114

Adhikari, P. B., Zhu, S., Liu, X., Huang, C., Xie, L., Wu, X., … Peters, B., Brownfield, L., … Kasahara, R. D. (2023). Discovery of a cis-regulatory element SaeM involved in dynamic regulation of synergid-specific MYB98. Frontiers in Plant Science, 14, 1177058. doi: 10.3389/fpls.2023.1177058

Ahmmed, M. K., Hachem, M., Ahmmed, F., Rashidinejad, A., Oz, F., Bekhit, A. A., Carne, A., & Bekhit, A. E.-D. A. (2023). Marine fish-derived lysophosphatidylcholine: Properties, extraction, quantification, and brain health application. Molecules, 28(7), 3088. doi: 10.3390/molecules28073088

Bailey, S., Guhlin, J., Senanayake, D. S., Scherer, P., Brekke, P., Ewen, J. G., Santure, A. W., & Whibley, A. (2023). Assembly of female and male hihi genomes (stitchbird; Notiomystis cincta) enables characterization of the W chromosome and resources for conservation genomics. Molecular Ecology Resources. Advance online publication. doi: 10.1111/1755-0998.13823

Barzegar-Fallah, A., Alimoradi, H., Dunlop, J. L., Torbati, E., & Baird, S. K. (2023). Serotonin type-3 receptor antagonists selectively kill melanoma cells through classical apoptosis, microtubule depolymerisation, ERK activation, and NF-κB downregulation. Cell Biology & Toxicology, 39, 1119-1135. doi: 10.1007/s10565-021-09667-0

Basak, I., Harfoot, R., Palmer, J. E., Kumar, A., Quiñones‑Mateu, M. E., Schweitzer, L., & Hughes, S. M. (2023). Neuroproteomic analysis after SARS-CoV-2 infection reveals overrepresented neurodegeneration pathways and disrupted metabolic pathways. Biomolecules, 13(11), 1597. doi: 10.3390/biom13111597

Brandon, R., Jiang, Y., Yeu, R. Q., Tweedie-Cullen, R., Smallman, K., Doherty, G., … Leask, M. P., Merriman, T. R., … Murphy, R. (2023). Stratified glucose-lowering response to vildagliptin and pioglitazone by obesity and hypertriglyceridemia in a randomized crossover trial. Frontiers in Endocrinology, 13, 1091421. doi: 10.3389/fendo.2022.1091421

Brůna, T., Li, H., Guhlin, J., Honsel, D., Herbold, S., Stanke, M., … Hoff, K. J. (2023). GALBA: Genome annotation with miniprot and AUGUSTUS. BMC Bioinformatics, 24, 327. doi: 10.1186/s12859-023-05449-z

Bunga, S. J., Ahmmed, M. K., Lawley, B., Carne, A., & Bekhit, A. E.-D. A. (2023). Physicochemical, biochemical and microbiological changes of jeotgal-like fermented Chinook salmon (Oncorhynchus tshawytscha) roe. Food Chemistry, 398, 133880. doi: 10.1016/j.foodchem.2022.133880

Bunga, S., Ahmmed, M. K., Carne, A., & Bekhit, A. E.-D. A. (2023). Positional distribution of fatty acids in processed Chinook salmon roe lipids determined by 13C magnetic resonance spectroscopy (NMR). Molecules, 28, 454. doi: 10.3390/molecules28010454

Carlson, J. C., Krishnan, M., Rosenthal, S. L., Russell, E. M., Zhang, J. Z., Hawley, N. L., Moors, J., … Stamp, L. K., … Merriman, T. R., … Minster, R. L. (2023). A stop-gain variant in BTNL9 is associated with atherogenic lipid profiles. Human Genetics & Genomic Advances, 4, 100155. doi: 10.1016/j.xhgg.2022.100155

Cooper, H. B., Krause, K. L., & Gardner, P. P. (2023). Finding priority bacterial ribosomes for future structural and antimicrobial research based upon global RNA and protein sequence analysis. PeerJ, 11, e14969. doi: 10.7717/peerj.14969

Cullen, G., Gilligan, J. B., Guhlin, J. G., & Dearden, P. K. (2023). Germline progenitors and oocyte production in the honeybee queen ovary. Genetics. Advance online publication. doi: 10.1093/genetics/iyad138

Das, A., Foglizzo, M., Padala, P., Zhu, J., & Day, C. L. (2023). TRAF trimers form immune signalling networks via RING domain dimerization. FEBS Letters, 597(9), 1213-1224. doi: 10.1002/1873-3468.14530

Davies, J. S., Currie, M. J., North, R. A., Scalise, M., Wright, J. D., Copping, J. M., … Jamieson, S. A., … Mace, P. D., & Dobson, R. C. J. (2023). Structure and mechanism of a tripartite ATP-independent periplasmic TRAP transporter. Nature Communications, 14(1), 1120. doi: 10.1038/s41467-023-36590-1

Digby, A., Eason, D., Catalina, A., Lierz, M., Galla, S., Urban, L., Le Lec, M. F., Guhlin, J., Steeves, T. E., Dearden, P. K., … Kākāpō Recovery Team. (2023). Hidden impacts of conservation management on fertility of the critically endangered kākāpō. PeerJ, 11, e14675. doi: 10.7717/peerj.14675

Dong, Y., Gupta, S., Wargent, J. J., Putterill, J., Macknight, R. C., Gechev, T. S., … Dijkwel, P. P. (2023). Comparative transcriptomics of multi-stress responses in Pachycladon cheesemanii and Arabidopsis thaliana. International Journal of Molecular Sciences, 24, 11323. doi: 10.3390/ijms241411323

Elsaid, K., Merriman, T. R., Rossitto, L.-A., Liu-Bryan, R., Karsh, J., Phipps-Green, A., … Cadzow, M., … Terkeltaub, R. (2023). Amplification of inflammation by lubricin deficiency implicated in incident, erosive gout independent of hyperuricemia. Arthritis & Rheumatology, 75(5), 794-805. doi: 10.1002/art.42413

Erdmann, M. B., Gardner, P. P., & Lamont, I. L. (2023). The PitA protein contributes to colistin susceptibility in Pseudomonas aeruginosa. PLoS ONE, 18(10), e0292818. doi: 10.1371/journal.pone.0292818

Eruera, A.-R., McSweeney, A. M., McKenzie-Goldsmith, G. M., Opel-Reading, H. K., Thomas, S. X., Campbell, A. C., … Ward, V. K., & Krause, K. L. (2023). Crystal structure of inhibitor-bound GII.4 Sydney 2012 norovirus 3C-like protease. Viruses, 15(11), 2202. doi: 10.3390/v15112202

Fellner, M., Walsh, A., Dela Ahator, S., Aftab, N., Sutherland, B., Tan, E. W., … Lentz, C. S. (2023). Biochemical and cellular characterization of the function of fluorophosphonate-binding hydrolase H (FphH) in Staphylococcus aureus support a role in bacterial stress response. ACS Infectious Diseases. Advance online publication. doi: 10.1021/acsinfecdis.3c00246

Fitzgerald, S., Blenkiron, C., Stephens, R., Mathy, J. A., Somers-Edgar, T., Rolfe, G., … Jackson, C., Eccles, M., … Rodger, E., … Guilford, P., … Print, C. G. (2023). Dynamic ctDNA mutational complexity in patients with melanoma receiving immunotherapy. Molecular Diagnosis & Therapy. Advance online publication. doi: 10.1007/s40291-023-00651-4

Gao, Y., Carne, A., Young, W., Burrow, K., Naji, S., Fraser-Miller, S. J., Gordon, K. C., & Bekhit, A. E.-D. A. (2023). Effect of consumption of sheep and cow milk on rat brain fatty acid and phospholipid composition. Food Chemistry. Advance online publication. doi: 10.1016/j.foodchem.2023.138056

Greenhough, H., Vignier, J., Peychers, C., Smith, K. F., Kenny, N. J., & Rolton, A. (2023). Exposure to Alexandrium spp. impairs the development of green-lipped mussel (Perna canaliculus) embryos and larvae. Harmful Algae, 127, 102465. doi: 10.1016/j.hal.2023.102465

Guhlin, J., Le Lec, M. F., Wold, J., Koot, E., Winter, D., Biggs, P. J., … Urban, L., Foster, Y., … Robertson, F. E., Robertson, B. C., Gemmell, N. J., … Dearden, P. K. (2023). Species-wide genomics of kākāpō provides tools to accelerate recovery. Nature Ecology & Evolution. Advance online publication. doi: 10.1038/s41559-023-02165-y

Han, L., Li, R., Lu, J., Ren, W., Ning, C., Pang, J., … Merriman, T. R., & Li, C. (2023). Association of the quantity, duration, and type of alcohol consumption on the development of gouty tophi. Arthritis Care & Research, 75(5), 1079-1087. doi: 10.1002/acr.24968

Hao, F., Liu, X., Zhou, B., Tian, Z., Zhou, L., Zong, H., … Macknight, R. C., … Cai, J. (2023). Chromosome-level genomes of three key Allium crops and their trait evolution. Nature Genetics, 55, 1976-1986. doi: 10.1038/s41588-023-01546-0

Harris, C., Hall, M., Arrowfield, R., Herridge, R., Eady, C., Macknight, R., & Brownfield, L. (2023). Assessing inbreeding in perennial ryegrass (Lolium perenne) as a step towards F1 hybrid breeding. Plant Breeding. Advance online publication. doi: 10.1111/pbr.13099

Inwood, S. N., Skelly, J., Guhlin, J. G., Harrop, T. W. R., Goldson, S. L., & Dearden, P. K. (2023). Chromosome-level genome assemblies of two parasitoid biocontrol wasps reveal the parthenogenesis mechanism and an associated novel virus. BMC Genomics, 24, 440. doi: 10.1186/s12864-023-09538-4

Inwood, S., Harrop, T. W. R., & Dearden, P. K. (2023). The venom composition and parthenogenesis mechanism of the parasitoid wasp Microctonus hyperodae, a declining biocontrol agent. Insect Biochemistry & Molecular Biology, 153, 103897. doi: 10.1016/j.ibmb.2022.103897

Irvani, N., Leong, S. Y., Carne, A., Agyei, D., & Oey, I. (2023). Impact of high-speed homogenisation followed by pH treatment of Arthrospira platensis on protein accessibility and in vitro protein digestibility. Food & Bioprocess Technology. Advance online publication. doi: 10.1007/s11947-023-03269-w

Jeunen, G.-J., Cane, J. S., Ferreira, S., Strano, F., von Ammon, U., Cross, H., Day, R., … Ellis, K., Urban, L., Pearson, N., Olmedo-Rojas, P., Kardailsky, A., Gemmell, N. J., & Lamare, M. (2023). Assessing the utility of marine filter feeders for environmental DNA (eDNA) biodiversity monitoring. Molecular Ecology Resources. Advance online publication. doi: 10.1111/1755-0998.13754

Joshi, A. D., McCormick, N., Yokose, C., Yu, B., Tin, A., Terkeltaub, R., Merriman, T. R., … Choi, H. K. (2023). Pre-diagnostic glycoprotein acetyl levels and incident and recurrent flare risk, accounting for serum urate levels: A population-based, prospective study and Mendelian randomization analysis. Arthritis & Rheumatology, 42523. Advance online publication. doi: 10.1002/art.42523

Kavle, R. R., Nolan, P. J., Bekhit, A. E.-D. A., Carne, A., Morton, J. D., & Agyei, D. (2023). Physicochemical characteristics, techno-functionalities, and amino acid profile of Prionoplus reticularis (Huhu) larvae and pupae protein extracts. Foods, 12, 417. doi: 10.3390/foods12020417

Kavle, R. R., Nolan, P. J., Carne, A., Agyei, D., Morton, J. D., & Bekhit, A. E.-D. A. (2023). Earth worming: An evaluation of earthworm (Eisenia andrei) as an alternative food source. Foods, 12, 1948. doi: 10.3390/foods12101948

Kavle, R. R., Pritchard, E. T. M., Carne, A., Bekhit, A. E.-D. A., & Agyei, D. (2023). Fatty acid profile, mineral composition, and health implications of consuming dried sago grubs (Rhynchophorus ferrugineus). Applied Sciences, 13, 363. doi: 10.3390/app13010363

Kavle, R. R., Pritchard, E. T. M., Carne, A., Bekhit, A. E.-D. A., Morton, J. D., & Agyei, D. (2023). Nutritional composition and techno-functional properties of sago palm weevil (Rhynchophorus ferrugineus) larvae protein extract. Journal of Asia-Pacific Entomology, 26, 102086. doi: 10.1016/j.aspen.2023.102086

Keighley, L. M., Lynch-Sutherland, C. F., Almomani, S. N., Eccles, M. R., & Macaulay, E. C. (2023). Unveiling the hidden players: The crucial role of transposable elements in the placenta and their potential contribution to pre-eclampsia. Placenta. Advance online publication. doi: 10.1016/j.placenta.2023.05.017

Khaing, E. P., & Eaton-Rye, J. J. (2023). Lys264 of the D2 protein performs a dual role in Photosystem II modifying assembly and electron transfer through the quinone–iron acceptor complex. Biochemistry, 62, 2738-2750. doi: 10.1021/acs.biochem.3c00240

Krishnan, M., Phipps-Green, A., Russell, E. M., Major, T. J., Cadzow, M., Stamp, L. K., Dalbeth, N., … Merriman, T. R., … Weeks, D. E. (2023). Association of rs9939609 in FTO with BMI among Polynesian peoples living in Aotearoa New Zealand and other Pacific nations. Journal of Human Genetics. Advance online publication. doi: 10.1038/s10038-023-01141-5

Le Lievre, L., Padinjare Chakkatu, S., Varghese, S., Day, R. C., Pilkington, S. M., & Brownfield, L. (2023). RNA-seq analysis of synchronized developing pollen isolated from a single anther. Frontiers in Plant Science, 14, 1121570. doi: 10.3389/fpls.2023.1121570

Lin, K., McCormick, N., Yokose, C., Joshi, A. D., Lu, N., Curhan, G. C., Merriman, T. R., … Choi, H. K. (2023). Interactions between genetic risk and diet influencing risk of incident female gout: Discovery and replication analysis of four prospective cohorts. Arthritis & Rheumatology, 75(6), 1028-1038. doi: 10.1002/art.42419

Longmuir, K., Park, J., Fitzgerald, R., Legge, M., & Shore, C. (2023). Hope: Valuing lives and persons with degenerative conditions: Duchenne muscular dystrophy. Sites, 20(1), 1-26. doi: 10.11157/sites-id526

Lovegrove, M. R., Dearden, P. K., & Duncan, E. J. (2023). Honeybee queen mandibular pheromone induces a starvation response in Drosophila melanogaster. Insect Biochemistry & Molecular Biology, 154, 103908. doi: 10.1016/j.ibmb.2023.103908

Mandal, A. K., Leask, M. P., Sumpter, N. A., Choi, H. K., Merriman, T. R., & Mount, D. B. (2023). Genetic and physiological effects of insulin-like growth factor-1 (IGF-1) on human urate homeostasis. Journal of the American Society of Nephrology. Advance online publication. doi: 10.1681/ASN.0000000000000054

Martin, L. W., Gray, A. R., Brockway, B., & Lamont, I. L. (2023). Pseudomonas aeruginosa is oxygen-deprived during infection in cystic fibrosis lungs, reducing the effectiveness of antibiotics. FEMS Microbiology Letters, fnad076. Advance online publication. doi: 10.1093/femsle/fnad076

Maurin, M., Ranjouri, M., Megino-Luque, C., Newberg, J. Y., Du, D., Martin, K., … Black, M. A., & Mann, K. M. (2023). RBFOX2 deregulation promotes pancreatic cancer progression and metastasis through alternative splicing. Nature Communications, 14, 8444. doi: 10.1038/s41467-023-44126-w

McGuinness, C. F., Black, M. A., & Dunbier, A. K. (2023). Restriction site associated DNA sequencing for tumour mutation burden estimation and mutation signature analysis. Cancer Medicine. Advance online publication. doi: 10.1002/cam4.6711

Middleton, A. J., Barzak, F. M., Fokkens, T. J., Nguyen, K., & Day, C. L. (2023). Zinc finger 1 of the RING E3 ligase, RNF125, interacts with the E2 to enhance ubiquitylation. Structure. Advance online publication. doi: 10.1016/j.str.2023.07.007

Moors, J., Krishnan, M., Sumpter, N., Takei, R., Bixley, M., Cadzow, M., Major, T. J., Phipps Green, A., Topless, R., Merriman, M., Rutledge, M., Morgan, B., … Stamp, L., Taumoepeau, M., … Wilcox, P., … McCormick, S., … Merriman, T. R., & Leask, M. (2023). A Polynesian-specific missense CETP variant alters the lipid profile. Human Genetics & Genomic Advances, 4, 100204. doi: 10.1016/j.xhgg.2023.100204

Moravec, J. C., Lanfear, R., Spector, D. L., Diermeier, S. D., & Gavryushkin, A. (2023). Testing for phylogenetic signal in single-cell RNA-seq data. Journal of Computational Biology, 30(4), 518-537. doi: 10.1089/cmb.2022.0357

Morgan-Richards, M., Marshall, C. J., Biggs, P. J., & Trewick, S. A. (2023). Insect freeze-tolerance Downunder: The microbial connection. Insects, 14(1), 89. doi: 10.3390/insects14010089

Mortensen, A. N., Jochym, M., Dearden, P. K., & Sainsbury, J. P. (2023). Old strategies as modern solutions, shook swarming reduced Varroa destructor infestation rates of managed honey bee, Apis mellifera, colonies. Journal of Apicultural Research. Advance online publication. doi: 10.1080/00218839.2023.2243044

Mungure, T. E., Farouk, M. M., Carne, A., Staincliffe, M., Stewart, I., Jowett, T., … Bekhit, A. E.-D. A. (2023). Understanding the influence of PEF treatment on minerals and lipid oxidation of wet- and dry-aged venison M. longissimus dorsi muscle. Innovative Food Science & Emerging Technologies, 83, 103238. doi: 10.1016/j.ifset.2022.103238

Nicholls, C., Chyou, T.-y., & Nishtala, P. S. (2023). Analysis of the adverse nervous system and gastrointestinal events associated with solifenacin in older adults using the US FDA adverse event reporting system. International Journal of Risk & Safety in Medicine, 34(1), 63-73. doi: 10.3233/jrs-210054

Orogun, L., Chyou, T.-y., & Nishtala, P. S. (2023). Acute renal failure and cardiac arrhythmias associated with remdesivir use in patients with COVID-19 infections: Analysis using the US FDA adverse event reporting system. International Journal of Risk & Safety in Medicine, 34, 87-99. doi: 10.3233/jrs-220009

Peppercorn, K., Edgar, C. D., Kleffmann, T., & Tate, W. P. (2023). A pilot study on the immune cell proteome of long COVID patients shows changes to physiological pathways similar to those in myalgic encephalomyelitis/chronic fatigue syndrome. Scientific Reports, 13(1), 22068. doi: 10.1038/s41598-023-49402-9

Peppercorn, K., Kleffmann, T., Hughes, S. M., & Tate, W. P. (2023). Secreted amyloid precursor protein alpha (sAPPα) regulates the cellular proteome and secretome of mouse primary astrocytes. International Journal of Molecular Sciences, 24, 7165. doi: 10.3390/ijms24087165

Ramsay, K. A., Rehman, A., Taylor Wardell, S., Martin, L. W., Bell, S. C., Patrick, W. M., … Lamont, I. L. (2023). Ceftazidime resistance in Pseudomonas aeruginosa is multigenic and complex. PLoS ONE, 18(5), e0285856. doi: 10.1371/journal.pone.0285856

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