Contact Details
- Phone
- 64 3 479 7865
- hod.biochemistry@otago.ac.nz
University Links
- Position
- Professor and Head of Department of Biochemistry, Faculty of Biomedical Sciences
- Department
- Department of Biochemistry
- Qualifications
- BSc(Manc) PhD(Ill)
- Research summary
- Photosynthesis
Research
Life on our planet is driven by Photosystem II that captures sunlight and extracts electrons from H2O to reduce CO2 into sugars while releasing the O2 we breathe. My laboratory concentrates on structure-function studies of Photosystem II in plants and cyanobacteria. Currently we are working on protein-protein interactions that facilitate sustained water-splitting activity by Photosystem II in response to changing environmental conditions such as fluctuating light levels, temperature and pH. We are also interested in protein factors that are required for the assembly of Photosystem II. Since the sun provides more energy in 1 hour than our entire global energy consumption in 1 year, we are also working on metabolic engineering to couple the harvesting of light by photosynthetic protein complexes to the efficient production of biofuels in cyanobacteria.
Media appearances
- Unlocking the Secrets of Photosynthesis (RNZ National, February 2015)
- Can Universities save the planet? (New Zealand Herald, October 2014)
- Five ideas to improve the world (New Zealand Herald, October 2014)
- Nightly interview: Julian Eaton-Rye (Channel 39, January 2014)
- Professor Julian Eaton-Rye's Inaugural Professorial Lecture (YouTube, 2014)
- Copying plants' ability to split water (ABC Radio National, May 2012)
Publications
Majhi, B. K., & Eaton-Rye, J. J. (2026). A simple and easy method for RNA extraction from the Cyanobacterium Synechocystis sp. PCC 6803. Bio-protocol, 16(7), e5654. doi: 10.21769/BioProtoc.5654 Journal - Research Other
Zhong, V., Vass, I., & Eaton-Rye, J. J. (2026). The contribution of D2-Arg265 to the molecular architecture of the quinone-Fe-bicarbonate acceptor complex of photosystem II. Biochimica et Biophysica Acta: Bioenergetics, 1867, 149578. doi: 10.1016/j.bbabio.2025.149578 Journal - Research Article
Arshad, F., Forsman, J. A., & Eaton-Rye, J. J. (2026). The contribution of CP43:Phe345 to the oxygen-evolving complex of Photosystem II is essential for stable water splitting. Biochemical & Biophysical Research Communications, 794, 153061. doi: 10.1016/j.bbrc.2025.153061 Journal - Research Article
Majhi, B. K., & Eaton-Rye, J. J. (2025). PsbE:Phe10 of cytochrome b(559) modifies inactivation and recovery of photosystem II in response to high-light stress. Physiologia Plantarum, 177, e70585. doi: 10.1111/ppl.70585 Journal - Research Article
Zhong, V., Vass, I., Patil, P. P., & Eaton-Rye, J. J. (2025). Met246 and Asn250 in the D2 protein are essential for the operation of the quinone-Fe-acceptor complex of Photosystem II. Plant & Cell Physiology. Advance online publication. doi: 10.1093/pcp/pcaf078 Journal - Research Article
2026
Journal - Research Article
Zhong, V., Vass, I., & Eaton-Rye, J. J. (2026). The contribution of D2-Arg265 to the molecular architecture of the quinone-Fe-bicarbonate acceptor complex of photosystem II. Biochimica et Biophysica Acta: Bioenergetics, 1867, 149578. doi: 10.1016/j.bbabio.2025.149578
Arshad, F., Forsman, J. A., & Eaton-Rye, J. J. (2026). The contribution of CP43:Phe345 to the oxygen-evolving complex of Photosystem II is essential for stable water splitting. Biochemical & Biophysical Research Communications, 794, 153061. doi: 10.1016/j.bbrc.2025.153061
Journal - Research Other
Majhi, B. K., & Eaton-Rye, J. J. (2026). A simple and easy method for RNA extraction from the Cyanobacterium Synechocystis sp. PCC 6803. Bio-protocol, 16(7), e5654. doi: 10.21769/BioProtoc.5654
2025
Journal - Research Article
Majhi, B. K., & Eaton-Rye, J. J. (2025). PsbE:Phe10 of cytochrome b(559) modifies inactivation and recovery of photosystem II in response to high-light stress. Physiologia Plantarum, 177, e70585. doi: 10.1111/ppl.70585
Zhong, V., Vass, I., Patil, P. P., & Eaton-Rye, J. J. (2025). Met246 and Asn250 in the D2 protein are essential for the operation of the quinone-Fe-acceptor complex of Photosystem II. Plant & Cell Physiology. Advance online publication. doi: 10.1093/pcp/pcaf078
Mousazadeh, Y., Zand, Z., Akbari, N., Eaton-Rye, J. J., Shen, J.-R., Allakhverdiev, S. I., & Najafpour, M. M. (2025). Manganese-based molecular systems in catalytic oxygen-evolution reaction: The role of nanoparticles, challenges, and opportunities. Coordination Chemistry Reviews, 541, 216805. doi: 10.1016/j.ccr.2025.216805
Khosravi, M., Allakhverdiev, S. I., Eaton-Rye, J. J., Hołyńska, M., Aro, E.-M., Shen, J.-R., & Najafpour, M. M. (2025). Fundamental properties, characterization techniques, and applications for photo(electro) catalysis: From nanosized manganese oxides to manganese coordination compounds [Review]. Coordination Chemistry Reviews, 527, 216396. doi: 10.1016/j.ccr.2024.216396
2024
Journal - Research Article
Brown, T. J., Vass, I., Summerfield, T. C., & Eaton-Rye, J. J. (2024). Phe265 of the D1 protein is required to stabilize plastoquinone binding in the QB-binding site of photosystem II in Synechocystis sp. PCC 6803. Biochemical & Biophysical Research Communications, 733, 150692. doi: 10.1016/j.bbrc.2024.150692
Biswas, S., Khaing, E. P., Zhong, V., & Eaton-Rye, J. J. (2024). Arg24 and 26 of the D2 protein are important for photosystem II assembly and plastoquinol exchange in Synechocystis sp. PCC 6803. Biochimica et Biophysica Acta: Bioenergetics, 1865(4), 149150. doi: 10.1016/j.bbabio.2024.149150
Arshad, F., & Eaton-Rye, J. J. (2024). Indirect interactions involving the PsbM or PsbT subunits and the PsbO, PsbU and PsbV proteins stabilize assembly and activity of Photosystem II in Synechocystis sp. PCC 6803. Photosynthesis Research, 160, 61-75. doi: 10.1007/s11120-024-01091-9
Sheridan, K. J., Eaton-Rye, J. J., & Summerfield, T. C. (2024). Mutagenesis of Ile184 in the cd-loop of the photosystem II D1 protein modifies acceptor-side function via spontaneous mutation of D1-His252 in Synechocystis sp. PCC 6803. Biochemical & Biophysical Research Communications, 702, 149595. doi: 10.1016/j.bbrc.2024.149595
Forsman, J. A., Sheridan, K. J., Singh, H., Brown, T. J., Vass, I., Summerfield, T. C., & Eaton-Rye, J. J. (2024). The Psb27 assembly factor and histidine-252 of the D1 protein modify energy transfer to photosystem II in Synechocystis sp. PCC 6803. Physiologia Plantarum, 176, e14154. doi: 10.1111/ppl.14154
Journal - Research Other
Nazari, M., Kordrostami, M., Ghasemi-Soloklui, A. A., Eaton-Rye, J. J., Pashkovskiy, P., Kuznetsova, V., & Allakhverdiev, S. I. (2024). Enhancing photosynthesis and plant productivity through genetic modification. Cells, 13, 1319. doi: 10.3390/cells13161319
Asih, D. R., Handayani, W., Ananda, A. Z., Yuniati, R., Hirota, R., Summerfield, T. C., & Eaton-Rye, J. J. (2024). An insight into potential phosphate bioremediation and renewable energy from agricultural waste via integrated wastewater treatment systems in Indonesia. Environmental Research Communications, 6, 042001. doi: 10.1088/2515-7620/ad359c
Journal - Professional & Other Non-Research Articles
Subramanyam, R., Tomo, T., Eaton-Rye, J. J., Yilmaz, G., & Allakhverdiev, S. I. (2024). International conference on Photosynthesis and Hydrogen Energy Research for Sustainability-2023: in honor of Robert Blankenship, Győző Garab, Michael Grätzel, Norman Hüner and Gunnar Öquist. Photosynthesis Research, 161, 141-150. doi: 10.1007/s11120-024-01087-5
2023
Journal - Research Article
Sheridan, K. J., Brown, T. J., Eaton-Rye, J. J., & Summerfield, T. C. (2023). Expression of the far-red D1 protein or introduction of conserved far-red D1 residues into Synechocystis sp. PCC 6803 impairs Photosystem II. Physiologia Plantarum, 175, e13997. doi: 10.1111/ppl.13997
Khaing, E. P., & Eaton-Rye, J. J. (2023). Lys264 of the D2 protein performs a dual role in Photosystem II modifying assembly and electron transfer through the quinone–iron acceptor complex. Biochemistry, 62, 2738-2750. doi: 10.1021/acs.biochem.3c00240
Journal - Professional & Other Non-Research Articles
Bricker, T. M., & Eaton-Rye, J. J. (2023). Preface to the special issue: The keynote lectures of the 18th International Congress on Photosynthesis Research. Photosynthesis Research, 158(2), 77-80. doi: 10.1007/s11120-023-01058-2
Other - Edited Journal
Eaton-Rye, J. J., & Bricker, T. M. (Eds.). (2023). Photosynthesis Research, 158(2). [Special issue: The keynote lectures of the 18th International Congress on Photosynthesis Research]. [Guest Editors].
2022
Journal - Research Article
Khaing, E. P., Zhong, V., Kodru, S., Vass, I., & Eaton-Rye, J. J. (2022). Tyr244 of the D2 protein is required for correct assembly and operation of the quinone-iron-bicarbonate acceptor complex of Photosystem II. Biochemistry, 61, 1298-1312. doi: 10.1021/acs.biochem.2c00164
Biswas, S., & Eaton-Rye, J. J. (2022). PsbX maintains efficient electron transport in Photosystem II and reduces susceptibility to high light in Synechocystis sp. PCC 6803. Biochimica et Biophysica Acta: Bioenergetics, 1863, 148519. doi: 10.1016/j.bbabio.2021.148519
Choo, P., Forsman, J. A., Hui, L., Khaing, E. P., Summerfield, T. C., & Eaton-Rye, J. J. (2022). The PsbJ protein is required for photosystem II activity in centers lacking the PsbO and PsbV lumenal subunits. Photosynthesis Research, 151, 103-111. doi: 10.1007/s11120-021-00862-y
Journal - Research Other
Ramprakash, B., Lindblad, P., Eaton-Rye, J. J., & Incharoensakdi, A. (2022). Current strategies and future perspectives in biological hydrogen production: A review. Renewable & Sustainable Energy Reviews, 168, 112773. doi: 10.1016/j.rser.2022.112773
Conference Contribution - Published proceedings: Full paper
Asih, D. R., Summerfield, T. C., & Eaton-Rye, J. J. (2022). Exploration of cyanobacteria as bioremediation candidates to reduce phosphorous contamination. IOP Conference Series: Earth & Environmental Science, 1062, 012027. doi: 10.1088/1755-1315/1062/1/012027
Conference Contribution - Published proceedings: Abstract
Brown, T. J., & Eaton-Rye, J. J. (2022). Deletion of RubA in combination with low-molecular-weight proteins disrupts Photosystem II assembly in Synechocystis sp. PC6803. Proceedings of the International Society of Photosynthesis Research (ISPR) 18th International Congress on Photosynthesis Research. (pp. 286). Retrieved from https://www.ps2022.nz
Majhi, B. K., & Eaton-Rye, J. J. (2022). Mutations in cytochrome b559 targeting interactions with phosphatidylglycerol impair PS II assembly and increase light sensitivity in Synechocystis sp. PC6803. Proceedings of the International Society of Photosynthesis Research (ISPR) 18th International Congress on Photosynthesis Research. (pp. 283). Retrieved from https://www.ps2022.nz
Zhong, V., & Eaton-Rye, J. J. (2022). Contributions of the DE loop of the D2 protein to the bicarbonate-binding environment of Photosystem II. Proceedings of the International Society of Photosynthesis Research (ISPR) 18th International Congress on Photosynthesis Research. (pp. 277). Retrieved from https://www.ps2022.nz
Craig, O. J. S., & Eaton-Rye, J. J. (2022). Removal of Photosystem II-specific lipoproteins modifies the phenotype of a ΔPsbj deletion strain of Synechocystis sp. PCC 6803. Proceedings of the International Society of Photosynthesis Research (ISPR) 18th International Congress on Photosynthesis Research. (pp. 275). Retrieved from https://www.ps2022.nz
Khaing, E. P., & Eaton-Rye, J. J. (2022). Mutations targeting Arg448 of CP43 disrupt the hydrogen-bond network around the bicarbonate-binding environment of Photosystem II in Synechocystis sp. PCC 6803. Proceedings of the International Society of Photosynthesis Research (ISPR) 18th International Congress on Photosynthesis Research. (pp. 268). Retrieved from https://www.ps2022.nz
Arshad, F., & Eaton-Rye, J. J. (2022). Mutations targeting Phe345 of CP43 result in elevated rates of bicarbonate-supported oxygen evolution and modified PS II fluorescence in Synechocystis sp. PCC 6803. Proceedings of the International Society of Photosynthesis Research (ISPR) 18th International Congress on Photosynthesis Research. (pp. 267). Retrieved from https://www.ps2022.nz
Sheridan, K. J., Eaton-Rye, J. J., & Summerfield, T. C. (2022). Characterisation of Synechocystis sp. PCC 6803 mutants that contain an introduced copy of psbA from a cyanobacterial gene cluster induced under far-red light. Proceedings of the International Society of Photosynthesis Research (ISPR) 18th International Congress on Photosynthesis Research. (pp. 266). Retrieved from https://www.ps2022.nz
Forsman, J. A., Brown, T. J., Sheridan, K. J., Summerfield, T. C., & Eaton-Rye, J. J. (2022). Partitioning of excitation energy between Photosystem II and Photosystem I is affected by mutations targeting the His-252 residue of the D1 subunit of Photosystem II. Proceedings of the International Society of Photosynthesis Research (ISPR) 18th International Congress on Photosynthesis Research. (pp. 247). Retrieved from https://www.ps2022.nz
2021
Journal - Research Article
Forsman, J. A., & Eaton-Rye, J. J. (2021). The hydrophobicity of mutations targeting D1:Val219 modifies formate and diuron binding in the quinone-Fe-acceptor complex of Photosystem II. Physiologia Plantarum, 172, 2217-2225. doi: 10.1111/ppl.13469
Forsman, J. A., & Eaton-Rye, J. J. (2021). The interaction between PsbT and the DE loop of D1 in Photosystem II stabilizes the quinone-iron electron acceptor complex. Biochemistry, 60(1), 53-63. doi: 10.1021/acs.biochem.0c00668
Conference Contribution - Published proceedings: Abstract
Fischer, C., & Eaton-Rye, J. J. (2021). The importance of the QB-binding site in photosynthetic oxygen evolution. Proceedings of the 16th Congress of the Federation of Asian & Oceanic Biochemists & Molecular Biologists (FAOBMB). (pp. 187). Retrieved from https://www.faobmb2021.org
2020
Journal - Research Article
Forsman, J. A., Fagerlund, R. D., Biswas, S., Summerfield, T. C., & Eaton-Rye, J. J. (2020). The PsbT protein modifies the bicarbonate-binding environment of Photosystem II. New Zealand Journal of Botany, 58(4), 406-421. doi: 10.1080/0028825X.2020.1772320
Forsman, J. A., & Eaton-Rye, J. J. (2020). The D1:Ser268 residue of Photosystem II contributes to an alternative pathway for QB protonation in the absence of bound bicarbonate. FEBS Letters, 594(18), 2953-2964. doi: 10.1002/1873-3468.13880
Sheridan, K. J., Duncan, E. J., Eaton-Rye, J. J., & Summerfield, T. C. (2020). The diversity and distribution of D1 proteins in cyanobacteria. Photosynthesis Research, 145(2), 111-128. doi: 10.1007/s11120-020-00762-7
Khaing, E. P., Zhong, V., & Eaton-Rye, J. J. (2020). An updated system for the targeted mutagenesis of the psbDI:psbC operon in Synechocystis sp. PCC 6803: Mutations targeting Asp460 in CP43 of Photosystem II reduce oxygen-evolving activity and perturb electron transfer in the quinone-Fe-acceptor complex. New Zealand Journal of Botany, 58(4), 389-405. doi: 10.1080/0028825X.2020.1771383
Fagerlund, R. D., Forsman, J. A., Biswas, S., Vass, I., Davies, F. K., Summerfield, T. C., & Eaton-Rye, J. J. (2020). Stabilization of Photosystem II by the PsbT protein impacts photodamage, repair and biogenesis. Biochimica et Biophysica Acta: Bioenergetics, 1861, 148234. doi: 10.1016/j.bbabio.2020.148234
Journal - Research Other
Stirbet, A., Björn, L. O., Shevela, D., Allakhverdiev, S. I., Nonomura, A., Zhu, X.-G., … Eaton-Rye, J. J. (2020). Celebrating the contributions of Govindjee after his retirement: 1999-2020. New Zealand Journal of Botany, 58(4), 422-460. [Review].
Eaton-Rye, J. J., Guieysse, B., Packer, M. A., Summerfield, T. C., & Wood, S. A. (2020). Biology and biotechnological applications of microalgae and photosynthetic prokaryotes: Part 2. New Zealand Journal of Botany, 58(4), 275-277. doi: 10.1080/0028825X.2020.1856887
Journal - Professional & Other Non-Research Articles
Borisova-Mubarakshina, M. M., Tsygankov, A. A., Tomo, T., Allakhverdiev, S. I., Eaton-Rye, J. J., & Govindjee, G. (2020). International conference on “Photosynthesis and Hydrogen Energy Research for Sustainability-2019”: In honor of Tingyun Kuang, Anthony Larkum, Cesare Marchetti and Kimiyuki Satoh. Photosynthesis Research, 146, 5-15. doi: 10.1007/s11120-019-00687-w
Conference Contribution - Published proceedings: Abstract
Arshad, F., & Eaton-Rye, J. (2020). Dynamics of water splitting kinetics by cyanobacteria: Potential source of fuel. Proceedings of the 14th Annual Otago Energy Research Centre (OERC) Symposium: New Energy Futures post COVID-19. Retrieved from https://www.otago.ac.nz/oerc
2019
Journal - Research Article
Forsman, J. A., Vass, I., & Eaton-Rye, J. J. (2019). D1:Glu244 and D1:Tyr246 of the bicarbonate-binding environment of Photosystem II moderate high light susceptibility and electron transfer through the quinone-Fe-acceptor complex. Biochimica et Biophysica Acta: Bioenergetics, 1860, 148054. doi: 10.1016/j.bbabio.2019.07.009
Forsman, J. A., Winter, R. T., & Eaton-Rye, J. J. (2019). An improved system for the targeted mutagenesis of the psbA2 gene in Synechocystis sp. PCC 6803: Mutation of D1-Glu244 to His impairs electron transfer between QA and QB of Photosystem II. New Zealand Journal of Botany, 59(2), 125-136. doi: 10.1080/0028825X.2019.1617321
Murota, C., Fujiwara, S., Tsujishita, M., Urabe, K., Takayanagi, S., Aoki, M., … Eaton-Rye, J. J., … Tsuzuki, M. (2019). Hyper-resistance to arsenate in the cyanobacterium Synechocystis sp. PCC 6803 is influenced by the differential kinetics of its pst-ABC transporters and external phosphate concentration exposure. Algal Research, 38, 101410. doi: 10.1016/j.algal.2019.101410
Morris, J. N., Kovács, S., Vass, I., Summerfield, T. C., & Eaton-Rye, J. J. (2019). Environmental pH and Glu364 to Gln mutation in the chlorophyll-binding CP47 protein affect redox-active TyrD and charge recombination in Photosystem II. FEBS Letters, 593, 163-174. doi: 10.1002/1873-3468.13307
Journal - Research Other
Borisova-Mubarakshina, M. M., Tsygankov, A. A., Tomo, T., Allakhverdiev, S. I., Eaton-Rye, J. J., & Govindjee, G. (2019). The 10th international conference on “Photosynthesis and Hydrogen Energy Research for sustainability”: A pictorial report in honor of Tingyun Kuang, Anthony Larkum, Cesare Marchetti and Kimiyuki Satoh. International Journal of Hydrogen Energy, 44, 30927-30934. doi: 10.1016/j.ijhydene.2019.09.224
Eaton-Rye, J. J., Guieysse, B., Packer, M. A., Summerfield, T. C., & Wood, S. A. (2019). Biology and biotechnological applications of microalgae and photosynthetic prokaryotes: Part 1. New Zealand Journal of Botany, 57(2), 65-69. doi: 10.1080/0028825X.2019.1625558
Eaton-Rye, J. J. (2019). Govindjee: A lifetime in photosynthesis. Photosynthesis Research, 139, 9-14. doi: 10.1007/s11120-018-0592-y
Conference Contribution - Published proceedings: Abstract
Summerfield, T. C., Morris, J. N., Pearson, T., Sheridan, K., & Eaton-Rye, J. J. (2019). Characterisation of pH sensitive Photosystem II mutants in Synechocystis sp. PCC 6803. In S. Allakhverdiev & I. Naydov (Eds.), Proceedings of the 10th International Photosynthesis and Hydrogen Energy Research for Sustainability Conference. (pp. 141). Retrieved from https://icprs.ru
Sheridan, K. J., Eaton-Rye, J. J., & Summerfield, T. C. (2019). Characterisation of a phylogenetically distinct group of D1 proteins from cyanobacteria. In S. Allakhverdiev & I. Naydov (Eds.), Proceedings of the 10th International Photosynthesis and Hydrogen Energy Research for Sustainability Conference. (pp. 68). Retrieved from https://icprs.ru
Khaing, E. P., Zhong, V., & Eaton-Rye, J. J. (2019). Impairment of Photosystem II assembly and acceptor side electron transfer following mutation of Thr243 and Lys264 of D2 in cyanobacteria. In S. Allakhverdiev & I. Naydov (Eds.), Proceedings of the 10th International Photosynthesis and Hydrogen Energy Research for Sustainability Conference. (pp. 46). Retrieved from https://icprs.ru
Forsman, J. A., Khaing, E. P., Singh, H., & Eaton-Rye, J. J. (2019). Mutation of D1 and D2 residues associated with bicarbonate and bound waters on the acceptor side of PS II impair the quinone-Fe-acceptor complex. In S. Allakhverdiev & I. Naydov (Eds.), Proceedings of the 10th International Photosynthesis and Hydrogen Energy Research for Sustainability Conference. (pp. 65). Retrieved from https://icprs.ru
Forsman, J., & Eaton-Rye, J. (2019). Hydrophobic interactions between the D1 and PsbT subunits of Photosystem II stabilize the iron-quinone acceptor complex. In S. Allakhverdiev & I. Naydov (Eds.), Proceedings of the 10th International Photosynthesis and Hydrogen Energy Research for Sustainability Conference. (pp. 64). Retrieved from https://icprs.ru
2018
Journal - Research Article
Biswas, S., & Eaton-Rye, J. J. (2018). PsbY is required for prevention of photodamage to photosystem II in a PsbM-lacking mutant of Synechocystis sp. PCC 6803. Photosynthetica, 56(1), 200-209. doi: 10.1007/s11099-018-0788-6
Journal - Research Other
Eaton-Rye, J. J. (2018). Foreword. Photosynthetica, 56(1), 1-10. doi: 10.1007/s11099-018-0796-6
Conference Contribution - Published proceedings: Abstract
Morris, J. N., Crawford, T. S., Pearson, T., Lim, E. G., Eaton-Rye, J. J., & Summerfield, T. C. (2018). Investigating genetic instability in cyanobacteria. Proceedings of the New Zealand Microbiological Society (NZMS) New Zealand Society for Biochemistry and Molecular Biology (NZSBMB) Joint Annual Conference: Microbes & Molecules. (pp. 56-57). Retrieved from https://www.nzmsconference.org.nz
Other Research Output
Eaton-Rye, J. (2018, September). Photosystem II assembly and the role of a bound bicarbonate cofactor. Department of Biochemistry, University of Otago, Dunedin, New Zealand. [Department Seminar].
2017
Journal - Research Article
Morris, J. N., Eaton-Rye, J. J., & Summerfield, T. C. (2017). Phenotypic variation in wild-type substrains of the model cyanobacterium Synechocystis sp. PCC 6803. New Zealand Journal of Botany, 55(1), 25-35. doi: 10.1080/0028825X.2016.1231124
Jackson, S. A., & Eaton-Rye, J. J. (2017). Modular growth vessels for the cultivation of the cyanobacterium Synechococcus sp. PCC 7002. New Zealand Journal of Botany, 55(1), 14-24. doi: 10.1080/0028825X.2016.1231123
Journal - Research Other
Eaton-Rye, J. J. (2017). Assembly of the photosystem II membrane-protein complex of oxygenic photosynthesis. Frontiers in Plant Science, 8, 884. doi: 10.3389/fpls.2017.00884
Journal - Professional & Other Non-Research Articles
Packer, M. A., Eaton-Rye, J. J., Summerfield, T. C., Guieysse, B., & Wood, S. A. (2017). Introduction: Proceedings of the 2015 New Zealand symposium on algae and photosynthetic prokaryotes. New Zealand Journal of Botany, 55, 1-4. doi: 10.1080/0028825X.2016.1261908
2016
Journal - Research Article
Morris, J. N., Eaton-Rye, J. J., & Summerfield, T. C. (2016). Environmental pH and the requirement for the extrinsic proteins of Photosystem II in the function of cyanobacterial photosynthesis. Frontiers in Plant Science, 7, 1135. doi: 10.3389/fpls.2016.01135
Crawford, T. S., Eaton-Rye, J. J., & Summerfield, T. C. (2016). Mutation of Gly195 of the ChlH subunit of Mg-chelatase reduces chlorophyll and further disrupts PS II assembly in a Ycf48-deficient strain of Synechocystis sp. PCC 6803. Frontiers in Plant Science, 7, 1060. doi: 10.3389/fpls.2016.01060
Crawford, T. S., Hanning, K. R., Chua, J. P. S., Eaton-Rye, J. J., & Summerfield, T. C. (2016). Comparison of D1´- and D1-containing PS II reaction centre complexes under different environmental conditions in Synechocystis sp. PCC 6803. Plant, Cell & Environment, 39, 1715-1726. doi: 10.1111/pce.12738
Najafpour, M. M., Renger, G., Holyńska, M., Moghaddam, A. N., Aro, E.-M., Carpentier, R., … Eaton-Rye, J. J., … Allakhverdiev, S. I. (2016). Manganese compounds as water-oxidizing catalysts: From the natural water-oxidizing complex to nanosized manganese oxide structures. Chemical Reviews, 116(5), 2886-2936. doi: 10.1021/acs.chemrev.5b00340
2015
Journal - Research Article
Nath, K., Najafpour, M. M., Voloshin, R. A., Balaghi, S. E., Tyystjärvi, E., Timilsina, R., Eaton-Rye, J. J., … Allakhverdiev, S. I. (2015). Photobiological hydrogen production and artificial photosynthesis for clean energy: From bio to nanotechnologies. Photosynthesis Research, 126(2-3), 237-247. doi: 10.1007/s11120-015-0139-4
Najafpour, M. M., Fekete, M., Sedigh, D. J., Aro, E.-M., Carpentier, R., Eaton-Rye, J. J., … Spiccia, L. (2015). Damage management in water-oxidizing catalysts: From photosystem II to nanosized metal oxides. ACS Catalysis, 5(3), 1499-1512. doi: 10.1021/cs5015157
Jackson, S. A., Eaton-Rye, J. J., Bryant, D. A., Posewitz, M. C., & Davies, F. K. (2015). Dynamics of photosynthesis in the glycogen-deficient glgC mutant of Synechococcus sp. PCC 7002. Applied & Environmental Microbiology, 81(18), 6210-6222. doi: 10.1128/aem.01751-15
Jackson, S. A., & Eaton-Rye, J. J. (2015). Characterization of a Synechocystis sp. PCC 6803 double mutant lacking the CyanoP and Ycf48 proteins of Photosystem II. Photosynthesis Research, 124, 217-229. doi: 10.1007/s11120-015-0122-0
Conference Contribution - Published proceedings: Abstract
Davies, F., Jackson, S., Eaton-Rye, J., & Posewitz, M. (2015). Photosynthetic limonene and bisabolene production in wild type and a glycogen-deficient mutant of Synechococcus sp. PCC 7002. Proceedings of the 249th National American Chemical Society (ACS) Spring Meeting. Retrieved from https://www.acs.org
Singh, H., & Eaton-Rye, J. (2015). Photosystem II: Biogenesis, function and repair in Synechocystis sp. PCC 6803. Proceedings of the Otago Energy Research Centre (OERC) Symposium. (pp. 28). Retrieved from http://www.otago.ac.nz/oerc/
Crawford, T., Eaton-Rye, J., & Summerfield, T. (2015). Cyanobacterial biofuels: The next generation. Proceedings of the Otago Energy Research Centre (OERC) Symposium. (pp. 17). Retrieved from http://www.otago.ac.nz/oerc/
2014
Chapter in Book - Research
Najafpour, M. M., Sedigh, D. J., Eaton-Rye, J. J., & Allakhverdiev, S. I. (2014). The water-oxidizing complex in Photosystem II. In S. I. Allakhverdiev, A. B. Rubin & V. A. Shuvalov (Eds.), Contemporary problems of photosynthesis (Vol. 1). (pp. 325-341). Moscow, Russia: Izhevsk Institute of Computer Science.
Hill, R. E., & Eaton-Rye, J. J. (2014). Plasmid Construction by SLIC or Sequence and Ligation-Independent Cloning. In S. Valla & R. Lale (Eds.), DNA cloning and assembly methods: Methods in molecular biology (Vol. 1116). (pp. 25-36). New York: Humana. doi: 10.1007/978-1-62703-764-8_2
Journal - Research Article
Jackson, S. A., Hervey, J. R. D., Dale, A. J., & Eaton-Rye, J. J. (2014). Removal of both Ycf48 and Psb27 in Synechocystis sp. PCC 6803 disrupts Photosystem II assembly and alters QĀ oxidation in the mature complex. FEBS Letters, 588(20), 3751-3760. doi: 10.1016/j.febslet.2014.08.024
Lamb, J. J., Hill, R. E., Eaton-Rye, J. J., & Hohmann-Marriott, M. F. (2014). Functional role of PilA in iron acquisition in the Cyanobacterium Synechocystis sp. PCC 6803. PLoS ONE, 9(8), e105761. doi: 10.1371/journal.pone.0105761
Najafpour, M. M., Ghobadi, M. Z., Haghighi, B., Eaton-Rye, J. J., Tomo, T., Shen, J.-R., & Allakhverdiev, S. I. (2014). Nano-sized manganese-calcium cluster in photosystem II. Biochemistry (Moscow), 79(4), 324-336. doi: 10.1134/S0006297914040026
Najafpour, M. M., Isaloo, M. A., Eaton-Rye, J. J., Tomo, T., Nishihara, H., Satoh, K., … Allakhverdiev, S. I. (2014). Water exchange rate in manganese-based water-oxidizing catalysts in photosynthetic systems: From the water-oxidizing complex in photosystem II to nano-sized manganese oxides. Biochimica et Biophysica Acta: Bioenergetics, 1837(9), 1395-1410. doi: 10.1016/j.bbabio.2014.03.008
Mabbitt, P. D., Wilbanks, S. M., & Eaton-Rye, J. J. (2014). Duplication and divergence of the Psb27 subunit of Photosystem II in the green algal lineage. New Zealand Journal of Botany, 52(1), 74-83. doi: 10.1080/0028825X.2013.859629
Mabbitt, P. D., Wilbanks, S. M., & Eaton-Rye, J. J. (2014). Structure and function of the hydrophilic Photosystem II assembly proteins: Psb27, Psb28 and Ycf48. Plant Physiology & Biochemistry, 81, 96-107. doi: 10.1016/j.plaphy.2014.02.013
Luo, H., Jackson, S. A., Fagerlund, R. D., Summerfield, T. C., & Eaton-Rye, J. J. (2014). The importance of the hydrophilic region of PsbL for the plastoquinone electron acceptor complex of Photosystem II. Biochimica et Biophysica Acta: Bioenergetics, 1837(9), 1435-1446. doi: 10.1016/j.bbabio.2014.02.015
Morris, J. N., Crawford, T. S., Jeffs, A., Stockwell, P. A., Eaton-Rye, J. J., & Summerfield, T. C. (2014). Whole genome re-sequencing of two ‘wild-type’ strains of the model cyanobacterium Synechocystis sp. PCC 6803. New Zealand Journal of Botany, 52(1), 36-47. doi: 10.1080/0028825X.2013.846267
Journal - Professional & Other Non-Research Articles
Eaton-Rye, J. J., Packer, M. A., Summerfield, T. C., & Wood, S. A. (2014). Algal and cyanobacterial bioenergy and diversity. New Zealand Journal of Botany, 52(1), 1-5. doi: 10.1080/0028825X.2013.877947
2013
Journal - Research Article
Najafpour, M. M., Rahimi, F., Sedigh, D. J., Carpentier, R., Eaton-Rye, J. J., Shen, J.-R., & Allakhverdiev, S. I. (2013). Gold or silver deposited on layered manganese oxide: A functional model for the water-oxidizing complex in photosystem II. Photosynthesis Research, 117(1-3), 423-429. doi: 10.1007/s11120-013-9899-x
Mabbitt, P. D., Eaton-Rye, J. J., & Wilbanks, S. M. (2013). Mutational analysis of the stability of Psb27 from Synechocystis sp. PCC 6803: Implications for models of Psb27 structure and binding to CP43. European Biophysics Journal, 42, 787-793. doi: 10.1007/s00249-013-0926-9
Najafpour, M. M., Tabrizi, M. A., Haghighi, B., Eaton-Rye, J. J., Carpentier, R., & Allakhverdiev, S. I. (2013). Imidazolium or guanidinium/layered manganese (III, IV) oxide hybrid as a promising structural model for the water-oxidizing complex of Photosystem II for artificial photosynthetic systems. Photosynthesis Research, 117, 413-421. doi: 10.1007/s11120-013-9814-5
Burut-Archanai, S., Eaton-Rye, J. J., Incharoensakdi, A., & Powtongsook, S. (2013). Phosphorus removal in a closed recirculating aquaculture system using the cyanobacterium Synechocystis sp. PCC 6803 strain lacking the SphU regulator of the Pho regulon. Biochemical Engineering Journal, 74, 69-75. doi: 10.1016/j.bej.2013.03.004
Lamb, J. J., Eaton-Rye, J. J., & Hohmann-Marriott, M. F. (2013). A cost-effective solution for the reliable determination of cell numbers of microorganisms in liquid culture. Current Microbiology, 67, 123-129. doi: 10.1007/s00284-013-0340-7
Summerfield, T. C., Crawford, T. S., Young, R. D., Chua, J. P. S., Macdonald, R. L., Sherman, L. A., & Eaton-Rye, J. J. (2013). Environmental pH affects photoautotrophic growth of Synechocystis sp. PCC 6803 strains carrying mutations in the lumenal proteins of PSII. Plant & Cell Physiology, 54(6), 859-874. doi: 10.1093/pcp/pct036
Journal - Research Other
Eaton-Rye, J. J. (2013). Govindjee at 80: More than 50 years of free energy for photosynthesis. Photosynthesis Research, 116(2), 111-144. doi: 10.1007/s11120-013-9921-3
Conference Contribution - Published proceedings: Full paper
Mabbitt, P. D., Rautureau, G. J., Day, C. L., Hinds, M. G., Wilbanks, S. M., & Eaton-Rye, J. J. (2013). Solution structure and physiological requirements for Psb27 in Synechocystis sp. PCC 6803. In T. Kuang, C. Lu & L. Zhang (Eds.), Photosynthesis Research for Food, Fuel and the Future: 15th International Conference on Photosynthesis. (pp. 432-435). Berlin, Germany: Springer. doi: 10.1007/978-3-642-32034-7_90
Summerfield, T. C., Young, R., Sherman, L. A., & Eaton-Rye, J. J. (2013). Characterization of a pH-sensitive Photosystem II mutant in the cyanobacterium Synechocystis sp. PCC 6803. In T. Kuang, C. Lu & L. Zhang (Eds.), Photosynthesis Research for Food, Fuel and the Future: 15th International Conference on Photosynthesis. (pp. 348-352). Berlin, Germany: Springer. doi: 10.1007/978-3-642-32034-7_73
Jackson, S. A., Fagerlund, R. D., Hinds, M. G., Wilbanks, S. M., & Eaton-Rye, J. J. (2013). Structure-function studies of the Photosystem II extrinsic subunits of PsbQ and PsbP from the cyanobacterium Synechocystis sp. PCC 6803. In T. Kuang, C. Lu & L. Zhang (Eds.), Photosynthesis Research for Food, Fuel and the Future: 15th International Conference on Photosynthesis. (pp. 86-90). Berlin, Germany: Springer. doi: 10.1007/978-3-642-32034-7_19
Fagerlund, R. D., Young, R., Luo, H., Bentley, F. K., & Eaton-Rye, J. J. (2013). Removal of the PsbT subunit of Photosystem II in Synechocystis sp. PCC 6803 causes QA oxidation to be blocked by dimethyl-p-benzoquinone. In T. Kuang, C. Lu & L. Zhang (Eds.), Photosynthesis Research for Food, Fuel and the Future: 15th International Conference on Photosynthesis. (pp. 79-82). Berlin, Germany: Springer. doi: 10.1007/978-3-642-32034-7_17
Hill, R. E., & Eaton-Rye, J. J. (2013). The polyhydroxybutyrate pathway promoters can drive foreign gene expression under circadian rhythm in Synechocystis sp. PCC 6803. In T. Kuang, C. Lu & L. Zhang (Eds.), Photosynthesis Research for Food, Fuel and the Future: 15th International Conference on Photosynthesis. (pp. 75-78). Berlin, Germany: Springer. doi: 10.1007/978-3-642-32034-7_16
Conference Contribution - Poster Presentation (not in published proceedings)
Summerfield, T., Crawford, T. S., Young, R. D., Chua, J. P. S., Macdonald, R., Sherman, L. A., & Eaton-Rye, J. J. (2013, August). Environmental pH alters growth of Photosystem II mutants in Synechocystis sp. PCC 6803. Poster session presented at the 16th International Congress on Photosynthesis, St. Louis, MO.
Lamb, J. J., Hill, R. E., Eaton-Rye, J. J., & Hohmann-Marriott, M. F. (2013, August). Pili-mediated electron donation to iron oxides in Synechocystis sp. PCC 6803. Poster session presented at the 16th International Congress on Photosynthesis, St. Louis, MO.
Mabbitt, P. D., Wilbanks, S., & Eaton-Rye, J. J. (2013, August). Implications for Psb27-binding to Photosystem II from protein stability measurements and sequence comparisons. Poster session presented at the 16th International Congress on Photosynthesis, St. Louis, MO.
Jackson, S. A., Dale, A. J., & Eaton-Rye, J. J. (2013, August). Exploring the role of the PsbP and Ycf48 proteins of Photosystem II in Synechocystis sp. PCC 6803. Poster session presented at the 16th International Congress on Photosynthesis, St. Louis, MO.
Other Research Output
Eaton-Rye, J. (2013, December). Photosystem II: How plants use sunlight to give us oxygen, food and fuel. University of Otago, Dunedin, New Zealand. [Inaugural Professorial Lecture].
2012
Edited Book - Research
Eaton-Rye, J. J., Tripathy, B. C., & Sharkey, T. D. (Eds.). (2012). Photosynthesis: Plastid biology, energy conversion and carbon assimilation. New York: Springer, 856p. doi: 10.1007/978-94-007-1579-0
Chapter in Book - Research
McConnell, I. L., Eaton-Rye, J. J., & van Rensen, J. J. S. (2012). Regulation of Photosystem II electron transport by bicarbonate. In J. J. Eaton-Rye, B. C. Tripathy & T. D. Sharkey (Eds.), Photosynthesis: Plastid biology, energy conversion and carbon assimilation. (pp. 475-500). New York: Springer. doi: 10.1007/978-94-007-1579-0
Chapter in Book - Other
Eaton-Rye, J. J. (2012). Contributions of Govindjee, 1970-1999. In J. J. Eaton-Rye, B. C. Tripathy & T. D. Sharkey (Eds.), Photosynthesis: Plastid biology, energy conversion and carbon assimilation. New York: Springer. doi: 10.1007/978-94-007-1579-0
Journal - Research Article
Najafpour, M. M., Moghaddam, A. N., Yang, Y. N., Aro, E.-M., Carpentier, R., Eaton-Rye, J. J., … Allakhverdiev, S. I. (2012). Biological water-oxidizing complex: A nano-sized manganese-calcium oxide in a protein environment. Photosynthesis Research, 114(1), 1-13. doi: 10.1007/s11120-012-9778-x
Lamb, J. J., Eaton-Rye, J. J., & Hohmann-Marriott, M. F. (2012). An LED-based fluorometer for chlorophyll quantification in the laboratory and in the field. Photosynthesis Research, 114(1), 59-68. doi: 10.1007/s11120-012-9777-y
Jackson, S. A., Hinds, M. G., & Eaton-Rye, J. J. (2012). Solution structure of CyanoP from Synechocystis sp. PCC 6803: New insights on the structural basis for functional specialization amongst PsbP family proteins. Biochimica et Biophysica Acta: Bioenergetics, 1817(8), 1331-1338. doi: 10.1016/j.bbabio.2012.02.032
Shevela, D., Eaton-Rye, J. J., Shen, J.-R., & Govindjee (2012). Photosystem II and the unique role of bicarbonate: A historical perspective. Biochimica et Biophysica Acta: Bioenergetics, 1817(8), 1134-1151. doi: 10.1016/j.bbabio.2012.04.003
Bricker, T. M., Roose, J. L., Fagerlund, R. D., Frankel, L. K., & Eaton-Rye, J. J. (2012). The extrinsic proteins of Photosystem II. Biochimica et Biophysica Acta: Bioenergetics, 1817(1), 121-142. doi: 10.1016/j.bbabio.2011.07.006
Vos, M. H., Bouzhir-Sima, L., Lambry, J.-C., Luo, H., Eaton-Rye, J. J., Ioanoviciu, A., … Liebl, U. (2012). Ultrafast ligand dynamics in the heme-based GAF sensor domains of the histidine kinases DosS and DosT from Mycobacterium tuberculosis. Biochemistry, 51(1), 159-166. doi: 10.1021/bi201467c
Conference Contribution - Published proceedings: Abstract
Eaton-Rye, J. J., Fagerlund, R. D., Jackson, S. A., & Mabbitt, P. D. (2012). The auxiliary proteins of Photosystem II in the cyanobacterium Synechocystis sp. PCC 6803. Proceedings of the 14th International Symposium on Phototrophic Prokaryotes (ISPP). (pp. 48). Retrieved from http://www.ibmc.up.pt/ispp2012/
Jackson, S., & Eaton-Rye, J. J. (2012). The oxygen evolving centre of photosytem II. Proceedings of the Oxygen Theme Meeting. (pp. 12). Dunedin, New Zealand: University of Otago. Retrieved from https://www.otago.ac.nz/research/otago051864.pdf
Other Research Output
Jackson, S.A., Hinds, M. G., Eaton-Rye, J.J. (2012, June). Solution structure of cyanobacterial PsbP (CyanoP) from Synechocystis sp. PCC 6803. RCSB Protein Databank entry. doi: 10.2210/pdb2LNJ/pdb
2011
Journal - Research Article
Burut-Archanai, S., Eaton-Rye, J. J., & Incharoensakdi, A. (2011). Na+-stimulated phosphate uptake system in Synechocystis sp. PCC 6803 with Pst1 as a main transporter. BMC Microbiology, 11, 225. doi: 10.1186/1471-2180-11-225
Nagarajan, A., Winter, R., Eaton-Rye, J., & Burnap, R. (2011). A synthetic DNA and fusion PCR approach to the ectopic expression of high levels of the D1 protein of photosystem II in Synechocystis sp. PCC 6803. Journal of Photochemistry & Photobiology B, 104(1-2), 212-219. doi: 10.1016/j.jphotobiol.2011.02.009
Fagerlund, R. D., & Eaton-Rye, J. J. (2011). The lipoproteins of cyanobacterial photosystem II. Journal of Photochemistry & Photobiology B, 104(1-2), 191-203. doi: 10.1016/j.jphotobiol.2011.01.022
Ehimen, E. A., Sun, Z. F., Carrington, C. G., Birch, E. J., & Eaton-Rye, J. J. (2011). Anaerobic digestion of microalgae residues resulting from the biodiesel production process. Applied Energy, 88(10), 3454-3463. doi: 10.1016/j.apenergy.2010.10.020
Conference Contribution - Verbal presentation and other Conference outputs
Eaton-Rye, J. J. (2011, September). Auxiliary proteins of Photosystem II: Tuning the enzyme for optimal activity. Verbal presentation at the Queenstown Molecular Biology (QMB) Meetings, Queenstown, New Zealand.
2010
Chapter in Book - Research
Eaton-Rye, J. (2010). Construction of gene interruptions and gene deletions in the cyanobacterium Synechocystis sp. strain PCC 6803. In R. Carpentier (Ed.), Photosynthesis Research Protocols. (2nd ed.) (pp. 295-312). NY: Springer. doi: 10.1007/978-1-60761-925-3_22
Journal - Research Article
Jackson, S. A., Fagerlund, R. D., Wilbanks, S. M., & Eaton-Rye, J. J. (2010). Crystal structure of PsbQ from Synechocystis sp. PCC 6803 at 1.8 Å: Implications for binding and function in cyanobacterial photosystem II. Biochemistry, 49(13), 2765-2767. doi: 10.1021/bi100217h
Hohmann-Marriott, M. F., Takizawa, K., Eaton-Rye, J. J., Mets, L., & Minagawa, J. (2010). The redox state of the plastoquinone pool directly modulates minimum chlorophyll fluorescence yield in Chlamydomonas reinhardtii. FEBS Letters, 584, 1021-1026. doi: 10.1016/j.febslet.2010.01.052
Conference Contribution - Published proceedings: Abstract
Hohmann-Marriott, M., & Eaton-Rye, J. J. (2010). Biological nanowires for harvesting solar energy. Proceedings of the Otago Energy Research Centre (OERC) Symposium: Energy Future. Retrieved from http://www.otago.ac.nz/oerc/
Crawford, T., Eaton-Rye, J., & Summerfield, T. (2010). Cyanobacterial hydrogen production under low oxygen conditions. Proceedings of the Otago Energy Research Centre (OERC) Symposium: Energy Future. Retrieved from http://www.otago.ac.nz/oerc/
Fagerlund, R. D., & Eaton-Rye, J. J. (2010). Identifying the roles of protein subunits in solar water-splitting. Proceedings of the Otago Energy Research Centre (OERC) Symposium: Energy Future. Retrieved from http://www.otago.ac.nz/oerc/
2009
Journal - Research Article
Mabbitt, P. D., Rautureau, G. J. P., Day, C. L., Wilbanks, S. M., Eaton-Rye, J. J., & Hinds, M. G. (2009). Solution structure of Psb27 from cyanobacterial photosystem II. Biochemistry, 48(37), 8771-8773. doi: 10.1021/bi901309c
Burut-Archanai, S., Incharoensakdi, A., & Eaton-Rye, J. J. (2009). The extended N-terminal region of SphS is required for detection of external phosphate levels in Synechocystis sp. PCC 6803. Biochemical & Biophysical Research Communications, 378(3), 383-388. doi: 10.1016/j.bbrc.2008.11.012
2008
Journal - Research Article
Bentley, F. K., Luo, H., Dilbeck, P., Burnap, R. L., & Eaton-Rye, J. J. (2008). Effects of inactivating psbM and psbT on photodamage and assembly of photosystem II in Synechocystis sp. PCC 6803. Biochemistry, 47(44), 11637-11646. doi: 10.1021/bi800804h
Luo, H., & Eaton-Rye, J. (2008). Directed mutagenesis of the transmembrane domain of the PsbL subunit of photosystem II in Synechocystis sp. PCC 6803. Photosynthesis Research, 98(1-3), 337-347. doi: 10.1007/s11120-008-9375-1
Conference Contribution - Published proceedings: Full paper
Ehimen, E. A., Carrington, C. G., Sun, Z., & Eaton-Rye, J. (2008). Biodiesel from microalgae: Investigating reaction conditions for in-situ transesterification. Proceedings of the Second International Symposium on Energy from Biomass and Waste. [CD-ROM] Rome: CISA. [Full Paper]
Luo, H., & Eaton-Rye, J. J. (2008). Mutations in CP47 that target putative hydrogen bonds with sulfoquinovosyl-diacylglycerol at the monomer-monomer interface of photosystem II. In J. F. Allen, E. Gantt, J. H. Golbeck & B. Osmond (Eds.), Proceedings of the 14th International Congress on Photosynthesis (Vol. 1): Photosynthesis: Energy from the sun. (pp. 733-735). Dordrecht, The Netherlands: Spinger. [Full Paper]
Bentley, F. K., & Eaton-Rye, J. J. (2008). The effect of removing photosystem II extrinsic proteins on dimer formation and recovery from photodamage in Synechocystis sp. PCC 6803. In J. F. Allen, E. Gantt, J. H. Golbeck & B. Osmond (Eds.), Proceedings of the 14th International Congress on Photosynthesis (Vol. 1): Photosynthesis: Energy from the sun. (pp. 715-717). Dordrecht, The Netherlands: Springer. [Full Paper]
Bentley, F. K., & Eaton-Rye, J. J. (2008). The effect of protein synthesis inhibitors on recovery of photodamaged photosystem II in Synechocystis sp. PCC 6803 lacking PsbM or PsbT. In J. F. Allen, E. Gantt, J. H. Golbeck & B. Osmond (Eds.), Proceedings of the 14th International Congress on Photosynthesis (Vol. 1): Photosynthesis: Energy from the sun. (pp. 711-714). Dordrecht, The Netherlands: Springer. [Full Paper]
Conference Contribution - Poster Presentation (not in published proceedings)
Jackson, S. A., & Eaton-Rye, J. J. (2008, November-December). Hydrophilic protin subunits that contribute to water splitting by photosystem II. Poster session presented at the New Zealand Institute of Chemistry, New Zealand Society for Biochemistry and Molecular Biology and the New Zealand Society of Plant Biologists Combined Conference, Dunedin, New Zealand.
Moore, J., & Eaton-Rye, J. J. (2008, November-December). Inactivation of genes encoding two forms of Psb28 in synechocystis SP. PCC 6803. Poster session presented at the New Zealand Institute of Chemistry, New Zealand Society for Biochemistry and Molecular Biology and the New Zealand Society of Plant Biologists Combined Conference, Dunedin, New Zealand.
Young, R. D., & Eaton-Rye, J. J. (2008, November-December). The PsbT subunit of photosystem II (PSII) influences PSII-specific electron transport. Poster session presented at the New Zealand Institute of Chemistry, New Zealand Society for Biochemistry and Molecular Biology and the New Zealand Society of Plant Biologists Combined Conference, Dunedin, New Zealand.
Gunn, L. H., Bentley, F. K., & Eaton-Rye, J. J. (2008, November-December). ″Extrinsic″ photosystem II proteins influence assembly in a ΔPsbM cyanobacterial mutant. Poster session presented at the New Zealand Institute of Chemistry, New Zealand Society for Biochemistry and Molecular Biology and the New Zealand Society of Plant Biologists Combined Conference, Dunedin, New Zealand.
Luo, H., & Eaton-Rye, J. J. (2008, November-December). Functional role of PSBL in Synechocystis SP. PCC 6803. Poster session presented at the New Zealand Institute of Chemistry, New Zealand Society for Biochemistry and Molecular Biology and the New Zealand Society of Plant Biologists Combined Conference, Dunedin, New Zealand.
Mabbitt, P., Hinds, M. G., Day, C. L., Wilbanks, S. M., & Eaton-Rye, J. J. (2008, November-December). Structural analysis of the PSB27 protein from Synechocystis SP. PCC 6803. Poster session presented at the New Zealand Institute of Chemistry, New Zealand Society for Biochemistry and Molecular Biology and the New Zealand Society of Plant Biologists Combined Conference, Dunedin, New Zealand.
Conference Contribution - Verbal presentation and other Conference outputs
Eaton-Rye, J. J., Bentley, F. K., & Luo, H. (2008, November-December). Roles of the PsbT subunit of photosystem II in the cyanobacterium Synechocystis Sp. PCC 6803. Verbal presentation at the New Zealand Institute of Chemistry, New Zealand Society for Biochemistry and Molecular Biology and the New Zealand Society of Plant Biologists Combined Conference, Dunedin, New Zealand.
2007
Journal - Research Article
Juntarajumnong, W., Hirani, T. A., Simpson, J. M., Incharoensakdi, A., & Eaton-Rye, J. J. (2007). Phosphate sensing in Synechocystis sp. PCC 6803: SphU and the SphS-SphR two-component regulatory system. Archives of Microbiology, 188, 389-402.
Juntarajumnong, W., Eaton-Rye, J. J., & Incharoensakdi, A. (2007). Two-component signal transduction in Synechocystis sp. PCC 6803 under phosphate limitation: Role of acetyl phosphate. Journal of Biochemistry & Molecular Biology, 40(5), 708-714.
Summerfield, T. C., Eaton-Rye, J. J., & Sherman, L. A. (2007). Global gene expression of a ΔPsbO:ΔPsbU mutant and a spontaneous revertant in the cyanobacterium Synechocystis sp. strain PCC 6803. Photosynthesis Research, 94, 265-274.
Juntarajumnong, W., Incharoensakdi, A., & Eaton-Rye, J. J. (2007). Identification of the start codon for sphS encoding the phosphate-sensing histidine kinase in Synechocystis sp. PCC 6803. Current Microbiology, 55, 142-146.
Eaton-Rye, J. J. (2007). Snapshots of the Govindjee lab from the late 1960s to the late 1990s, and beyond... Photosynthesis Research, 94, 153-178.
Eaton-Rye, J. J. (2007). Celebrating Govindjee's 50 years in photosynthesis research and his 75th birthday. Photosynthesis Research, 93, 1-5.
Other - Edited Journal
Eaton-Rye, J. J. (Ed.). (2007). Photosynthesis Research, 94(2-3) Govindjee Special Issue: Part B: Celebrating Govindjee's 50 years in photosynthesis research and his 75th birthday [Guest editor]. [Journal Editor].
Eaton-Rye, J. J. (Ed.). (2007). Photosynthesis Research, 93(1-3) Govindjee Special Issue: Part A: Celebrating Govindjee's 50 years in photosynthesis research and his 75th birthday [Guest editor]. [Journal Editor].
2006
Journal - Research Article
Summerfield, T. C., & Eaton-Rye, J. J. (2006). Pseudocyphellaria crocata, P. neglecta and P. perpetua from the Northern and Southern Hemispheres are a phylogenetic species and share cyanobionts. New Phytologist, 170, 597-607.
2005
Journal - Research Article
Eaton-Rye, J. J. (2005). Requirements for different combinations of the extrinsic proteins in specific cyanobacterial Photosystem II mutants. Photosynthesis Research, 84, 275-281.
Summerfield, T. C., Winter, R. T., & Eaton-Rye, J. J. (2005). Investigation of a requirement for the PsbP-like protein in Synechocystis sp. PCC 6803. Photosynthesis Research, 84, 263-268.
Summerfield, T. C., Shand, J. A., Bentley, F. K., & Eaton-Rye, J. J. (2005). PsbQ (SII1638) in Synechocystis sp. PCC 6803 is required for photosystem II activity in specific mutants and in nutrient-limiting conditions. Biochemistry, 44, 805-815.
Conference Contribution - Published proceedings: Full paper
Selvanesan, L., Eaton-Rye, J. J., & MacRae, E. A. (2005). Verification of real-time PCR differential expression analysis of the SPS gene family from Arabidopsis thaliana. In A. van der Est & D. Bruce (Eds.), Proceedings of the 13th International Congress of Photosynthesis. 2, (pp. 740-742). Lawrence, KS, USA: Alliance Communications Group. [Full Paper]
Veerman, J., Eaton-Rye, J., Mullineaux, C., Vasil'ev, S., & Bruce, D. (2005). When a lumenal protein interferes with stromal side affairs: Synechocystis PCC 6803 mutants lacking psbU. In A. van der Est & D. Bruce (Eds.), Proceedings of the 13th International Congress of Photosynthesis. 1, (pp. 144-146). Lawrence, KS, USA: Alliance Communications Group. [Full Paper]
Summerfield, T. C., & Eaton-Rye, J. J. (2005). Removal of the PsbQ-like protein (SII1638) in nutrient-limiting conditions and in strains lacking PsbO, PsbU, or PsbV. In A. van der Est & D. Bruce (Eds.), Proceedings of the 13th International Congress of Photosynthesis. 1, (pp. 336-338). Lawrence, KS, USA: Alliance Communications Group. [Full Paper]
Woods, M., Parmenter, G., Miskell, J.-A., & Eaton-Rye, J. J. (2005). Photosynthetic electron transport supported by methyl viologen in the obligate shade plants Panax ginseng and Panax quinquefolius. In A. van der Est & D. Bruce (Eds.), Proceedings of the 13th International Congress of Photosynthesis. 1, (pp. 105-107). Lawrence, KS, USA: Alliance Communications Group. [Full Paper]
2004
Chapter in Book - Research
Eaton-Rye, J. J. (2004). The construction of gene knockouts in the Cyanobacterium Synechocystis sp. PCC 6803. In R. Carpentier (Ed.), Methods in molecular biology, vol. 274: Photosynthesis research protocols. (pp. 309-324). Totowa, USA: Humana Press.
Journal - Research Article
Li, Z., Andrews, H., Eaton-Rye, J. J., & Burnap, R. L. (2004). In situ effects of mutations of the extrinsic cytochrome c550 of photosystem II in Synechocystis sp. PCC6803. Biochemistry, 43, 14161-14170.
Anderson, L. B., Ouellette, A. J. A., Eaton-Rye, J., Maderia, M., MacCoss, M. J., Yates, III, J. R., & Barry, B. A. (2004). Evidence for a post-translational modification, aspartyl aldehyde, in a photosynthetic membrane protein. Journal of the American Chemical Society, 126, 8399-8405.
2003
Journal - Research Article
Eaton-Rye, J. J., Shand, J. A., & Nicoll, W. S. (2003). pH-dependent photoautotrophic growth of specific photosystem II mutants lacking lumenal extrinsic polypeptides in Synechocystis PCC 6803. FEBS Letters, 543, 148-153.
2002
Journal - Research Article
Summerfield, T., Galloway, D. J., & Eaton-Rye, J. J. (2002). Species of cyanolichens from Pseudocyphellaria with indistinguishable ITS sequences have different photobionts. New Phytologist, 155, 121-129.
Clarke, S., Funk, C., Hendry, G., Shand, J. A., Wydrzynski, T., & Eaton-Rye, J. J. (2002). Amino acid deletions in the cytosolic domains of the chlorophyll a-binding protien CP47 slow QA- oxidation and/or prevent the assembly of photosystem II. Plant Molecular Biology, 50, 563-572.
Kimura, A., Eaton-Rye, J. J., Morita, E., Nishiyama, Y., & Hayashi, H. (2002). Protection of the oxygen-evolving machinery by the extrinsic proteins of photosystem II is essential for development of cellular thermotolerance in Synechocystis sp. PCC 6803. Plant & Cell Physiology, 43, 932-938.
Miskell, J. A., Parmenter, G., & Eaton-Rye, J. J. (2002). Decreased Hill reaction rates and slow turnover of transitory starch in the obligate shade plant Panax quinquefolius L. (American ginseng). Planta, 215, 969-979.
2001
Journal - Research Article
Hirani, T. A., Suzuki, I., Murata, N., Hayashi, H., & Eaton-Rye, J. J. (2001). Characterization of a two-component signal transduction system involved in the induction of alkaline phosphatase under phosphate-limiting conditions in Synechocystis sp.PCC6803. Plant Molecular Biology, 45, 133-144.
Conference Contribution - Published proceedings: Abstract
Miskell, J.-A., Parmenter, G., & Eaton-Rye, J. J. (2001). Photoperiodic changes of soluble sugar levels in Panax ginseng. Proceedings of the 12th International Congress on Photosynthesis. Collingwood, Australia: CSIRO Publishing. [Abstract]
Eaton-Rye, J. J., & Nicoll, W. S. (2001). Deletions in the lumenal domains of the D1 protein that prevent the assembly of photosystem II in Synechocystis sp. PCC 6803. PS2001 Proceedings 12th International Congress on Photosynthesis. (S13-028), (pp. 1-4). Victoria: CSIRO Publishing. [Abstract]
Eaton-Rye, J. J., & Shand, J. A. (2001). Mutations between Gly-429 and Thr-436 in loop E of the chlorophyll a-binding protein CP47 characterized in the presence or absence of the membrane-extrinsic proteins of the water-oxidizing complex of photosystem II. PS2001 Proceedings 12th International Congress on Photosynthesis. (S13-004), (pp. 1-6). Victoria: CSIRO Publishing. [Abstract]
Huang, I., Lynch, D. P., & Eaton-Rye, J. J. (2001). Mutagenesis of Histidine-469 in the photosystem II chlorophyll a-binding protein CP47 in Synechocystis sp. PCC 6803. PS2001 Proceedings 12th International Congress on Photosynthesis. (S22-028), (pp. 1-5). Victoria: CSIRO Publishing. [Abstract]
Summerfield, T. C., Galloway, D. J., & Eaton-Rye, J. J. (2001). The use of psbB for the identification of cyanobacterial lichen symbionts. PS2001 Proceedings of the 12th International Congress on Photosynthesis. (S3-041), (pp. 1-4). Victoria: CSIRO Publishing. [Abstract]
Conference Contribution - Poster Presentation (not in published proceedings)
Miskell, J. A. H., Parmenter, G., & Eaton-Rye, J. J. (2001, August). Light management and carbon metabolism in leaves of obligate shade plants. Poster session presented at the 12th International Congress on Photosynthesis, Brisbane, Australia.
2000
Journal - Research Article
Clarke, S. M., & Eaton-Rye, J. J. (2000). Amino acid deletions in loop C of the chlorophyll a-binding protein CP47 alter the chloride requirement and/or prevent the assembly of photosystem II. Plant Molecular Biology, 44, 591-601.
1999
Journal - Research Article
Clarke, S. M., & Eaton-Rye, J. J. (1999). Mutation of Phe-363 in the photosystem II protein CP47 impairs photoautotrophic growth, alters the chloride requirement, and prevents photosynthesis in the absence of either PSII-O or PSII-V in Synechocystis sp. PCC 6803. Biochemistry, 38, 2707-2715.
1998
Journal - Research Article
Morgan, T. R., Shand, J. A., Clarke, S. M., & Eaton-Rye, J. J. (1998). Specific requirements for cytochrome c-550 and the manganese-stabilizing protein in photoautotrophic strains of Synechocystis sp. PCC 6803 with mutations in the domain Gly-351 to Thr-436 of the chlorophyll-binding protein CP47. Biochemistry, 37(41), 14437-14449.
Conference Contribution - Published proceedings: Abstract
Clarke, S. M., & Eaton-Rye, J. J. (1998). Characterization of the double mutant FF362,363RR in loop E of the photosystem II chlorophyll-binding protein CP47. In G. Garab (Ed.), Photosynthesis: Mechanisms and Effects. II, (pp. 1459-1462). Netherlands: Kluwer Academic Publishers. [Abstract]
Shand, J. A., & Eaton-Rye, J. J. (1998). Removal of PSII-U in a strain of Synechocystis sp. PCC 6803 lacking the PSII-O protein prevents photosynthesis. In G. Garab (Ed.), Photosynthesis: Mechanisms and Effects. II, (pp. 1455-1458). Netherlands: Kluwer Academic Publishers. [Abstract]
1995
Chapter in Book - Research
Clarke, S. M., & Eaton-Rye, J. J. (1995). Oligonucleotide-directed complementation of a lethal deletion within the large hydrophilic domain of CP47. In P. Mathis (Ed.), Photosynthesis: From Light to Biosphere: Proceedings of the Xth International Photosynthesis Congress, Vol. 3. (pp. 469-472). Dordrecht: Kluwer.