Otago Biochemistry publications: journal articles

Aloi, S., Davies, C. G., Karplus, P. A., Wilbanks, S. M., & Jameson, G. N. L. (2019). Substrate specificity in thiol dioxygenases. Biochemistry. Advance online publication. doi: 10.1021/acs.biochem.9b00079

Zawierucha, K., Marshall, C. J., Wharton, D., & Janko, K. (2019). A nematode in the mist: Scottnema lindsayae is the only soil metazoan in remote Antarctic deserts, at greater densities with altitude. Polar Research, 38, 1-12. doi: 10.33265/polar.v38.3494

Sweetman, E., Ryan, M., Edgar, C., MacKay, A., Vallings, R., & Tate, W. (2019). Changes in the transcriptome of circulating immune cells of a New Zealand cohort with myalgic encephalomyelitis/chronic fatigue syndrome. International Journal of Immunopathology & Pharmacology, 33, 1-8. doi: 10.1177/2058738418820402

Panfilio, K. A., Vargas Jentzsch, I. M., Benoit, J. B., Erezyilmaz, D., Suzuki, Y., Colella, S., … Duncan, E. J., … Cridge, A. G., … Dearden, P. K., … Leask, M., … Lovegrove, M. R., … Tidswell, O., … Richards, S. (2019). Molecular evolutionary trends and feeding ecology diversification in the Hemiptera, anchored by the milkweed bug genome. Genome Biology, 20, 64. doi: 10.1186/s13059-019-1660-0

Hudson, M., Mead, A. T. P., Chagné, D., Roskruge, N., Morrison, S., Wilcox, P. L., & Allan, A. C. (2019). Indigenous perspectives and gene editing in Aotearoa New Zealand. Frontiers in Bioengineering & Biotechnology, 7, 70. doi: 10.3389/fbioe.2019.00070

Fagerlund, R. D., Ferguson, T. J., Maxwell, H. W. R., Opel-Reading, H. K., Krause, K. L., & Fineran, P. C. (2019). Reconstitution of CRISPR adaptation in vitro and its detection by PCR. Methods in Enzymology. Advance online publication. doi: 10.1016/bs.mie.2018.10.024

Lu, J., Sun, M.-S., Wu, X.-J., Yuan, X., Liu, Z., Qu, X.-J., … Merriman, T. R., & Li, C.-G. (2019). Urate-lowering therapy alleviates atherosclerosis inflammatory response factors and neointimal lesions in a mouse model of induced carotid atherosclerosis. FEBS Journal. Advance online publication. doi: 10.1111/febs.14768

Norton, S. E., Ward-Hartstonge, K. A., McCall, J. L., Leman, J. K. H., Taylor, E. S., Munro, F., Black, M. A., … Kemp, R. A. (2019). High-dimensional mass cytometric analysis reveals an increase in effector regulatory T cells as a distinguishing feature of colorectal tumors. Journal of Immunology. Advance online publication. doi: 10.4049/jimmunol.1801368

Morrissey, J., Mockett, B. G., Singh, A., Kweon, D., Ohline, S. M., Tate, W. P., Hughes, S. M., & Abraham, W. C. (2019). A C-terminal peptide from secreted amyloid precursor protein-α enhances long-term potentiation in rats and a transgenic mouse model of Alzheimer's disease. Neuropharmacology. Advance online publication. doi: 10.1016/j.neuropharm.2019.107670

Huang, W., Feng, Z., Aila, R., Hou, Y., Carne, A., & Bekhit, A. E.-D. A. (2019). Effect of pulsed electric fields (PEF) on physico-chemical properties, β-carotene and antioxidant activity of air-dried apricots. Food Chemistry. Advance online publication. doi: 10.1016/j.foodchem.2019.04.021

Murota, C., Fujiwara, S., Tsujishita, M., Urabe, K., Takayanagi, S., Aoki, M., … Eaton-Rye, J. J., … Tsuzuki, M. (2019). Hyper-resistance to arsenate in the cyanobacterium Synechocystis sp. PCC 6803 is influenced by the differential kinetics of its pst-ABC transporters and external phosphate concentration exposure. Algal Research, 38, 101410. doi: 10.1016/j.algal.2019.101410

McCulloch, G. A., Foster, B. J., Dutoit, L., Ingram, T., Hay, E., Veale, A. J., Dearden, P. K., & Waters, J. M. (2019). Ecological gradients drive insect wing loss and speciation: The role of the alpine treeline. Molecular Ecology. Advance online publication. doi: 10.1111/mec.15114

Gardner, P. P., Watson, R. J., Morgan, X. C., Draper, J. L., Finn, R. D., Morales, S. E., & Stott, M. B. (2019). Identifying accurate metagenome and amplicon software via a meta-analysis of sequence to taxonomy benchmarking studies. PeerJ, 7, e6160 . doi: 10.7717/peerj.6160

Vazirpanah, N., Ottria, A., van der Linden, M., Wichers, C. G. K., Schuiveling, M., van Lochem, E., Phipps-Green, A., Merriman, T., … Broen, J. C. A. (2019). mTOR inhibition by metformin impacts monosodium urate crystal-induced inflammation and cell death in gout: A prelude to a new add-on therapy? Annals of the Rheumatic Diseases. Advance online publication. doi: 10.1136/annrheumdis-2018-214656

Bouckaert, R., Vaughan, T. G., Barido-Sottani, J., Duchêne, S., Fourment, M., Gavryushkina, A., … Drummond, A. J. (2019). BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis. PLoS Computational Biology, 15(4), e1006650. doi: 10.1371/journal.pcbi.1006650

Opel-Reading, H. K., Mortuza, R., & Krause, K. L. (2019). Detection of D-glutamate production from the dual function enzyme, 4-amino-4-deoxychorismate lyase/D-amino acid transaminase, in Mycobacterium smegmatis. Bio-protocol, 9(1), e3135. doi: 10.21769/BioProtoc.3135

Nilsen, A. R., Brown, C. M., Summerfield, T. C., & Orlovich, D. A. (2019). Cortinarius atropileatus sp. nov. (Cortinariaceae) from New Zealand. New Zealand Journal of Botany, 57(1), 50-61. doi: 10.1080/0028825X.2018.1548493

Liu, Y.-F., Oey, I., Bremer, P., Silcock, P., Carne, A., & McConnell, M. (2019). Pulsed electric fields treatment at different pH enhances the antioxidant and anti-inflammatory activity of ovomucin-depleted egg white. Food Chemistry, 276, 164-173. doi: 10.1016/j.foodchem.2018.10.009

Mutreja, I., Warring, S. L., Lim, K. S., Swadi, T., Clinch, K., Mason, J. M., … Chambers, S. T., … Gerth, M. L., … Woodfield, T. B. F. (2019). Biofilm inhibition via delivery of novel methylthioadenosine nucleosidase inhibitors from PVA-tyramine hydrogels while supporting mesenchymal stromal cell viability. ACS Biomaterials Science & Engineering, 5(2), 748-758. doi: 10.1021/acsbiomaterials.8b01141

Forester, N. T., Lane, G. A., McKenzie, C. M., Lamont, I. L., & Johnson, L. J. (2019). The role of SreA-mediated iron regulation in maintaining Epichloë festucae - Lolium perenne symbioses. Molecular Plant-Microbe Interactions. Advance online publication. doi: 10.1094/mpmi-03-19-0060-r

West, J. D., Tang, P.-C., Everett, C. A., MacKay, G. E., Flockhart, J. H., & Keighren, M. A. (2019). Re-evaluation of the causes of variation among mouse aggregation chimaeras. Biology Open, 8(5), bio042804. doi: 10.1242/bio.042804

Fitzgerald, R. P., Legge, M., Rewi, P., & Robinson, E. (2019). Excluding indigenous bioethical concerns when regulating frozen embryo storage: An Aotearoa New Zealand case study. Reproductive Biomedicine & Society Online. Advance online publication. doi: 10.1016/j.rbms.2019.01.001

Stockwell, R. E., Chin, M., Johnson, G. R., Wood, M. E., Sherrard, L. J., Ballard, E., … Ramsay, K. A., … Bell, S. C. (2019). Transmission of bacteria in bronchiectasis and chronic obstructive pulmonary disease: Low burden of cough aerosols. Respirology. Advance online publication. doi: 10.1111/resp.13544

Casas Garcia, G. P., Perugini, M. A., Lamont, I. L., & Maher, M. J. (2019). The purification of the σ^FpvI/FpvR and σ^PvdS/FpvR protein complexes is facilitated at room temperature. Protein Expression & Purification. Advance online publication. doi: 10.1016/j.pep.2019.03.005

Schwartz, U., Németh, A., Diermeier, S., Exler, J. H., Hansch, S., Maldonado, R., … Längst, G. (2019). Characterizing the nuclease accessibility of DNA in human cells to map higher order structures of chromatin. Nucleic Acids Research, 47(3), 1239-1254. doi: 10.1093/nar/gky1203

Bursill, D., Taylor, W. J., Terkeltaub, R., Kuwabara, M., Merriman, T. R., Grainger, R., … Chapman, P. T., … Stamp, L. K., … Dalbeth, N. (2019). Gout, Hyperuricemia and Crystal-Associated Disease Network (G-CAN) consensus statement regarding labels and definitions for disease elements in gout. Arthritis Care & Research, 71(3), 427-434. doi: 10.1002/acr.23607

Jordan, D. M., Choi, H. K., Verbanck, M., Topless, R., Won, H.-H., Nadkarni, G., Merriman, T. R., & Do, R. (2019). No causal effects of serum urate levels on the risk of chronic kidney disease: A Mendelian randomization study. PLoS Medicine, 16(1), e1002725. doi: 10.1371/journal.pmed.1002725

Rushton-Green, R., Darnell, R. L., Taiaroa, G., Carter, G. P., Cook, G. M., & Morgan, X. C. (2019). Agricultural origins of a highly-persistent lineage of vancomycin-resistant Enterococcus faecalis in New Zealand. Applied & Environmental Microbiology. Advance online publication. doi: 10.1128/aem.00137-19

Shehreen, S., Chyou, T.-y., Fineran, P. C., & Brown, C. M. (2019). Genome-wide correlation analysis suggests different roles of CRISPR-Cas systems in the acquisition of antibiotic resistance genes in diverse species. Philosophical Transactions of the Royal Society B, 374(1772), 20180384. doi: 10.1098/rstb.2018.0384

Wheeler, N. E., Blackmore, T., Reynolds, A. D., Midwinter, A. C., Marshall, J., French, N. P., … Gardner, P. P., & Biggs, P. J. (2019). Genomic correlates of extraintestinal infection are linked with changes in cell morphology in Campylobacter jejuni. Microbial Genomics. Advance online publication. doi: 10.1099/mgen.0.000251

Forsman, J. A., Winter, R. T., & Eaton-Rye, J. J. (2019). An improved system for the targeted mutagenesis of the psbA2 gene in Synechocystis sp. PCC 6803: Mutation of D1-Glu244 to His impairs electron transfer between Q_A and Q_B of Photosystem II. New Zealand Journal of Botany. Advance online publication. doi: 10.1080/0028825X.2019.1617321

Leask, M., Dowdle, A., Salvesen, H., Topless, R., Fadason, T., Wei, W., … Marsman, J., … Merriman, T. R., & Horsfield, J. A. (2019). Functional urate-associated genetic variants influence expression of lincRNAs LINC01229 and MAFTRR. Frontiers in Genetics, 9, 733. doi: 10.3389/fgene.2018.00733

Mockett, B. G., Guévremont, D., Elder, M. K., Parfitt, K. D., Peppercorn, K., Morrissey, J., Singh, A., Hintz, T. J., … Tate, W. P., Williams, J. M., & Abraham, W. C. (2019). Glutamate receptor trafficking and protein synthesis mediate the facilitation of LTP by secreted amyloid precursor protein-alpha. Journal of Neuroscience. Advance online publication. doi: 10.1523/jneurosci.1826-18.2019

Foglizzo, M., & Day, C. L. (2019). E2 enzymes: Lessons in ubiquitin transfer from XLID patients. Nature Chemical Biology, 15(1), 6-7. doi: 10.1038/s41589-018-0191-4

Murugayah, S. A., Warring, S. L., & Gerth, M. L. (2019). Optimisation of a high-throughput fluorescamine assay for detection of N-acyl-L-homoserine lactone acylase activity [Short communication]. Analytical Biochemistry, 566, 10-12. doi: 10.1016/j.ab.2018.10.029

Al-Jiab, R. A., Gillum, J., Alexander, A., Tompkins, D. M., Phillips, C. B., Dearden, P. K., & Gemmell, N. J. (2019). The complete mitogenome sequence of the agricultural pest, clover root weevil: The key to its own demise? [Mitogenome announcement]. Mitochondrial DNA Part B, 4(1), 878-879. doi: 10.1080/23802359.2018.1561218

Chyou, T., & Brown, C. M. (2018). Prediction and diversity of tracrRNAs from type II CRISPR-Cas systems. RNA Biology. Advance online publication. doi: 10.1080/15476286.2018.1498281

Khan, A. A., Randhawa, M. A., Carne, A., Mohamed Ahmed, I. A., Barr, D., Reid, M., & Bekhit, A. E.-D. A. (2018). Quality and nutritional minerals in chicken breast muscle treated with low and high pulsed electric fields. Food & Bioprocess Technology, 11(1), 122-131. doi: 10.1007/s11947-017-1997-x

Watkins, O. C., Sharpe, M. L., Perry, N. B., & Krause, K. L. (2018). New Zealand glowworm (Arachnocampa luminosa) bioluminescence is produced by a firefly-like luciferase but an entirely new luciferin. Scientific Reports, 8(3278). doi: 10.1038/s41598-018-21298-w

Lee, S. L. J., Horsfield, J. A., Black, M. A., Rutherford, K., & Gemmell, N. J. (2018). Identification of sex differences in zebrafish (Danio rerio) brains during early sexual differentiation and masculinisation using 17α-methyltestoterone. Biology of Reproduction, 99(2), 446-460. doi: 10.1093/biolre/iox175

Harrop, T. W. R., Denecke, S., Yang, Y. T., Chan, J., Daborn, P. J., Perry, T., & Batterham, P. (2018). Evidence for activation of nitenpyram by a mitochondrial cytochrome P450 in Drosophila melanogaster. Pest Management Science, 74(7), 1616-1622. doi: 10.1002/ps.4852

Cridge, A. G., Crowe-McAuliffe, C., Mathew, S. F., & Tate, W. P. (2018). Eukaryotic translational termination efficiency is influenced by the 3' nucleotides within the ribosomal mRNA channel. Nucleic Acids Research, gkx1315. doi: 10.1093/nar/gkx1315

Wai, D. C., Szyszka, T. N., Campbell, A. E., Kwong, C., Wilkinson-White, L. E., Silva, A. P. G., … Chalmers, J. N., Patrick, W. M., … Mackay, J. P. (2018). The BRD3 ET domain recognizes a short peptide motif through a mechanism that is conserved across chromatin remodelers and transcriptional regulators. Journal of Biological Chemistry. Advance online publication. doi: 10.1074/jbc.RA117.000678

Thomas, A., Routh, E. D., Pullikuth, A., Jin, G., Su, J., Chou, J. W., … Black, M. A., … Miller, L. D. (2018). Tumor mutational burden is a determinant of immune-mediated survival in breast cancer. OncoImmunology, 7(10), e1490854. doi: 10.1080/2162402X.2018.1490854

Martin, L. W., Robson, C. L., Watts, A. M., Gray, A. R., Wainwright, C. E., Bell, S. C., Ramsay, K. A., … Brockway, B., & Lamont, I. L. (2018). Expression of Pseudomonas aeruginosa antibiotic resistance genes varies greatly during infections in cystic fibrosis patients. Antimicrobial Agents & Chemotherapy, 62(11), e01789-18. doi: 10.1128/AAC.01789-18

Murphy, R., Gamble, G. D., House, M., Pool, B., Horne, A., Merriman, T. R., & Dalbeth, N. (2018). Greater insulin response to acute fructose ingestion among Māori and Pacific people compared to European people living in Aotearoa New Zealand. Internal Medicine Journal. Advance online publication. doi: 10.1111/imj.14135

Morris, J. N., Kovács, S., Vass, I., Summerfield, T. C., & Eaton-Rye, J. J. (2018). Environmental pH and Glu364 to Gln mutation in the chlorophyll-binding CP47 protein affect redox-active TyrD and charge recombination in Photosystem II. FEBS Letters. Advance online publication. doi: 10.1002/1873-3468.13307

Foglizzo, M., Middleton, A. J., Burgess, A. E., Crowther, J. M., Dobson, R. C. J., Murphy, J. M., Day, C. L., & Mace, P. D. (2018). A bidentate Polycomb Repressive-Deubiquitinase complex is required for efficient activity on nucleosomes. Nature Communications, 9, 3932. doi: 10.1038/s41467-018-06186-1

Wu, R., Wang, T., Richardson, A. C., Allan, A. C., Macknight, R. C., & Varkonyi-Gasic, E. (2018). Histone modification and activation by SOC1-like and drought stress-related transcription factors may regulate AcSVP2 expression during kiwifruit winter dormancy. Plant Science. Advance online publication. doi: 10.1016/j.plantsci.2018.12.001

Burrow, K., Young, W., Carne, A., McConnell, M., Hammer, N., Scholze, M., & Bekhit, A. E.-D. (2018). Consumption of sheep milk compared to cow milk can affect trabecular bone ultrastructure in a rat model. Food & Function. Advance online publication. doi: 10.1039/c8fo01598h

Major, T. J., Topless, R. K., Dalbeth, N., & Merriman, T. R. (2018). Evaluation of the diet wide contribution to serum urate levels: Meta-analysis of population based cohorts. BMJ, 363, k3951. doi: 10.1136/bmj.k3951

Tomek, P., Gore, S. K., Potts, C. L., Print, C. G., Black, M. A., Hallermayr, A., … Ching, L.-M. (2018). Imprinted and ancient gene: A potential mediator of cancer cell survival during tryptophan deprivation. Cell Communication & Signaling, 16, 88. doi: 10.1186/s12964-018-0301-7

Fitzgerald, R. P., Wardell, S., & Legge, M. (2018). Fetal genetic difference and a cosmopolitan vernacular of the right to choose. Women's Studies International Forum, 67, 110-117. doi: 10.1016/j.wsif.2017.04.001

Khan, A. A., Randhawa, M. A., Carne, A., Ahmed, I. A. M., Al-Juhaimi, F. Y., Barr, D., Reid, M., & Bekhit, A. E.-D. A. (2018). Effect of low and high pulsed electric field processing on macro and micro minerals in beef and chicken. Innovative Food Science & Emerging Technologies, 45, 273-279. doi: 10.1016/j.ifset.2017.11.012

Parakra, R. D., Kleffmann, T., Jameson, G. N. L., & Ledgerwood, E. C. (2018). The proportion of Met80-sulfoxide dictates peroxidase activity of human cytochrome c. Dalton Transactions, 47, 9128. doi: 10.1039/c8dt02185f

Lim, C. S., Wardell, S. J. T., Kleffmann, T., & Brown, C. M. (2018). The exon-intron gene structure upstream of the initiation codon predicts translation efficiency. Nucleic Acids Research. Advance online publication. doi: 10.1093/nar/gky282

Sun, M., Vazquez, A. I., Reynolds, R. J., Singh, J. A., Reeves, M., Merriman, T. R., … de los Campos, G. (2018). Untangling the complex relationships between incident gout risk, serum urate, and its comorbidities. Arthritis Research & Therapy, 20(1), 90. doi: 10.1186/s13075-018-1558-3

Burrow, K., Young, W., McConnell, M., Carne, A., Barr, D., Reid, M., & Bekhit, A. E.-D. (2018). The distribution of essential, trace, and non-essential minerals in weanling male rats fed sheep or cow milk. Molecular Nutrition & Food Research. Advance online publication. doi: 10.1002/mnfr.201800482

Ketharnathan, S., Leask, M., Boocock, J., Phipps-Green, A. J., Antony, J., O'Sullivan, J. M., Merriman, T. R., & Horsfield, J. A. (2018). A non-coding genetic variant maximally associated with serum urate levels is functionally linked to HNF4A-dependent PDZK1 expression. Human Molecular Genetics, ddy295. Advance online publication. doi: 10.1093/hmg/ddy295

Veale, A. J., Foster, B. J., Dearden, P. K., & Waters, J. M. (2018). Genotyping-by-sequencing supports a genetic basis for wing reduction in an alpine New Zealand stonefly. Scientific Reports, 8, 16275. doi: 10.1038/s41598-018-34123-1

Soni, A., Oey, I., Silcock, P., Permina, E., & Bremer, P. J. (2018). Differential gene expression for investigation of the effect of germinants and heat activation to induce germination in Bacillus cereus spores. Food Research International. Advance online publication. doi: 10.1016/j.foodres.2018.12.041

Silvestro, D., Warnock, R. C. M., Gavryushkina, A., & Stadler, T. (2018). Closing the gap between palaeontological and neontological speciation and extinction rate estimates. Nature Communications, 9(1), 5237. doi: 10.1038/s41467-018-07622-y

Wu, R., Wang, T., Warren, B. A. W., Thomson, S. J., Allan, A. C., Macknight, R. C., & Varkonyi‑Gasic, E. (2018). Kiwifruit SVP2 controls developmental and drought-stress pathways. Plant Molecular Biology, 96(3), 233-244. doi: 10.1007/s11103-017-0688-3

Fanning, N., Merriman, T. R., Dalbeth, N., & Stamp, L. K. (2018). An association of smoking with serum urate and gout: A health paradox. Seminars in Arthritis & Rheumatism, 47(6), 825-842. doi: 10.1016/j.semarthrit.2017.11.004

Biswas, S., & Eaton-Rye, J. J. (2018). PsbY is required for prevention of photodamage to photosystem II in a PsbM-lacking mutant of Synechocystis sp. PCC 6803. Photosynthetica, 56(1), 200-209. doi: 10.1007/s11099-018-0788-6

Bilton, T. P., Schofield, M. R., Black, M. A., Chagné, D., Wilcox, P. L., & Dodds, K. G. (2018). Accounting for errors in low coverage high-throughput sequencing data when constructing genetic maps using biparental outcrossed populations. Genetics, 209(1), 65-76. doi: 10.1534/genetics.117.300627

Hou, Y., Vasileva, E. A., Mishchenko, N. P., Carne, A., McConnell, M., & Bekhit, A. E.-D. A. (2018). Extraction, structural characterization and stability of polyhydroxylated naphthoquinones from shell and spine of New Zealand sea urchin (Evechinus chloroticus). Food Chemistry. Advance online publication. doi: 10.1016/j.foodchem.2018.08.046

Fudge, J. B., Lee, R. H., Laurie, R. E., Mysore, K. S., Wen, J., Weller, J. L., & Macknight, R. C. (2018). Medicago truncatula SOC1 genes are up-regulated by environmental cues that promote flowering. Frontiers in Plant Science, 9, 496. doi: 10.3389/fpls.2018.00496

Skelly, J., Pushparajan, C., Duncan, E., & Dearden, P. (2018). Evolution of the Torso activation cassette, a pathway required for terminal patterning and moulting. Insect Molecular Biology. Advance online publication. doi: 10.1111/imb.12560

McCormick, S. P. A., & Schneider, W. J. (2018). Lipoprotein(a) catabolism: A case of multiple receptors. Pathology. Advance online publication. doi: 10.1016/j.pathol.2018.11.003

Groves, M. R., Schroer, C. F. E., Middleton, A. J., Lunev, S., Danda, N., Ali, A. M., … Williams, C. (2018). Structural insights into K48-linked ubiquitin chain formation by the Pex4p-Pex22p complex. Biochemical & Biophysical Research Communications, 496(2), 562-567. doi: 10.1016/j.bbrc.2017.12.150

Campbell, H., Fleming, N., Roth, I., Mehta, S., Wiles, A., Williams, G., … Munro, F., McNoe, L., Black, M., McCall, J., Slatter, T. L., … Braithwaite, A. W. (2018). Δ133p53 isoform promotes tumour invasion and metastasis via interleukin-6 activation of JAK-STAT and RhoA-ROCK signalling. Nature Communications, 9(1), 254. doi: 10.1038/s41467-017-02408-0

Brewster, J., Garama, D., Lamare, M., & Carne, A. (2018). Carotenoid composition of a New Zealand (Evechinus chloroticus) and an Australian (Heliocidaris erythrogramma) sea urchin in relation to gonad colour. Aquaculture Research, 49(8), 2751-2762. doi: 10.1111/are.13736

Hakkaart, C., Ellison-Loschmann, L., Day, R., Sporle, A., Koea, J., Harawira, P., … Guilford, P. (2018). Germline CDH1 mutations are a significant contributor to the high frequency of early-onset diffuse gastric cancer cases in New Zealand Māori. Familial Cancer. Advance online publication. doi: 10.1007/s10689-018-0080-8

Newberg, J. Y., Black, M. A., Jenkins, N. A., Copeland, N. G., Mann, K. M., & Mann, M. B. (2018). SB Driver Analysis: A Sleeping Beauty cancer driver analysis framework for identifying and prioritizing experimentally actionable oncogenes and tumor suppressors. Nucleic Acids Research. Advance online publication. doi: 10.1093/nar/gky450

Taylor, E. S., McCall, J. L., Shen, S., Girardin, A., Munro, F. M., Black, M. A., Ward-Hartstonge, K. A., & Kemp, R. A. (2018). Prognostic roles for IL-2-producing and CD69⁺ T cell subsets in colorectal cancer patients. International Journal of Cancer. Advance online publication. doi: 10.1002/ijc.31598

Sew Hoy, W., Antoun, J., Lin, W., Chandler, N., Merriman, T., & Farella, M. (2018). Ecological momentary assessment of pain in adolescents undergoing orthodontic treatment using a smartphone app. Seminars in Orthodontics. Advance online publication. doi: 10.1053/j.sodo.2018.04.002

Poulter, R. T. M., Ho, J., Handley, T., Taiaroa, G., & Butler, M. I. (2018). Comparison between complete genomes of an isolate of Pseudomonas syringae pv. actinidiae from Japan and a New Zealand isolate of the pandemic lineage. Scientific Reports, 8, 10915. doi: 10.1038/s41598-018-29261-5

Fellner, M., Rankin, J. A., Desguin, B., Hu, J., & Hausinger, R. P. (2018). Analysis of the active site cysteine residue of the sacrificial sulfur insertase LarE from Lactobacillus plantarum. Biochemistry, 57(38), 5513-5523. doi: 10.1021/acs.biochem.8b00601

Jamieson, S. A., Ruan, Z., Burgess, A. E., Curry, J. R., McMillan, H. D., Brewster, J. L., Dunbier, A. K., … Mace, P. D. (2018). Substrate binding allosterically relieves autoinhibition of the pseudokinase TRIB1. Science Signaling, 11(549), eaau0597. doi: 10.1126/scisignal.aau0597

Pushparajan, C., Goswami, S. K., McAdam, C. J., Hanton, L. R., Dearden, P. K., Moratti, S. C., & Cridge, A. G. (2018). A mechanically strengthened polyacrylamide gel matrix fully compatible with electrophoresis of proteins and nucleic acids. Electrophoresis, 39(5-6), 824-832. doi: 10.1002/elps.201700303

Ryder, K., Ali, M. A., Billakanti, J., & Carne, A. (2018). Fundamental characterisation of caseins harvested by dissolved air flotation from dairy wastewater and comparison with skim milk powder. International Dairy Journal, 78, 112-121. doi: 10.1016/j.idairyj.2017.11.007

González-Miró, M., Rodríguez-Noda, L. M., Fariñas-Medina, M., Cedré-Marrero, B., Madariaga-Zarza, S., Zayas-Vignier, C., … Kleffmann, T., … Rehm, B. H. A. (2018). Bioengineered polyester beads co-displaying protein and carbohydrate-based antigens induce protective immunity against bacterial infection. Scientific Reports, 8, 1888. doi: 10.1038/s41598-018-20205-7

Tang, P.-C., MacKay, G. E., Flockhart, J. H., Keighren, M. A., Kopakaki, A., & West, J. D. (2018). Selection against BALB/c strain cells in mouse chimaeras. Biology Open, 7, bio030189. doi: 10.1242/bio.030189

Clifton, B. E., Kaczmarski, J. A., Carr, P. D., Gerth, M. L., Tokuriki, N., & Jackson, C. J. (2018). Evolution of cyclohexadienyl dehydratase from an ancestral solute-binding protein. Nature Chemical Biology. Advance online publication. doi: 10.1038/s41589-018-0043-2

Krishnan, M., Major, T. J., Topless, R. K., Dewes, O., Yu, L., Thompson, J. M. D., … Stamp, L. K., … Wilcox, P., Grattan, D., … Merriman, T. R. (2018). Discordant association of the CREBRF rs373863828 A allele with increased BMI and protection from type 2 diabetes in Māori and Pacific (Polynesian) people living in Aotearoa/New Zealand. Diabetologia. Advance online publication. doi: 10.1007/s00125-018-4623-1

Aiderus, A., Black, M. A., & Dunbier, A. K. (2018). Fatty acid oxidation is associated with proliferation and prognosis in breast and other cancers. BMC Cancer, 18, 805. doi: 10.1186/s12885-018-4626-9

Roberts, R. L., Wallace, M. C., Harrison, A. A., White, D., Dalbeth, N., Stamp, L. K., … Highton, J., Merriman, T. R., … Stebbings, S. M. (2018). Association of Crohn's disease-related chromosome 1q32 with ankylosing spondylitis is independent of bowel symptoms and faecal calprotectin. PeerJ, 6, e5088. doi: 10.7717/peerj.5088

Fatima, T., McKinney, C., Major, T. J., Stamp, L. K., Dalbeth, N., Iverson, C., Merriman, T. R., & Miner, J. N. (2018). The relationship between ferritin and urate levels and risk of gout. Arthritis Research & Therapy, 20, 179. doi: 10.1186/s13075-018-1668-y

Goodman, L., Cree, L., Jones, G., Legge, M., Shelling, A., & Farquhar, C. (2018). The futility of fertility research? Barriers to embryo research in New Zealand. New Zealand Medical Journal, 131(1477), 63-70. Retrieved from https://www.nzma.org.nz/journal

Godwin, T. D., Kelly, S. T., Brew, T. P., Bougen-Zhukov, N. M., Single, A. B., Chen, A., Stylianou, C. E., … Currie, S. K., … Beetham, H. G., … Black, M. A., & Guilford, P. J. (2018). E-cadherin-deficient cells have synthetic lethal vulnerabilities in plasma membrane organisation, dynamics and function. Gastric Cancer. Advance online publication. doi: 10.1007/s10120-018-0859-1

Chagné, D., Ryan, J., Saeed, M., Van Stijn, T., Brauning, R., Clarke, S., … Wilcox, P., … Lewis, D. (2018). A high density linkage map and quantitative trait loci for tree growth for New Zealand mānuka (Leptospermum scoparium L.). New Zealand Journal of Crop & Horticultural Science. Advance online publication. doi: 10.1080/01140671.2018.1540437

Wee, B. A., Tai, A. S., Sherrard, L. J., Ben Zakour, N. L., Hanks, K. R., Kidd, T. J., Ramsay, K. A., Lamont, I., … Beatson, S. A. (2018). Whole genome sequencing reveals the emergence of a Pseudomonas aeruginosa shared strain sub-lineage among patients treated within a single cystic fibrosis centre. BMC Genomics, 19, 644. doi: 10.1186/s12864-018-5018-x

Bräuning, S., Catanach, A., Lord, J. M., Bicknell, R., & Macknight, R. C. (2018). Comparative transcriptome analysis of the wild-type model apomict Hieracium praealtum and its loss of parthenogenesis (lop) mutant. BMC Plant Biology, 18, 206. doi: 10.1186/s12870-018-1423-1

Craig, H. J. B., Stachowicz, K., Black, M., Parry, M., Burke, C. R., Meier, S., & Amer, P. R. (2018). Genotype by environment interactions in fertility traits in New Zealand dairy cows. Journal of Dairy Science. Advance online publication. doi: 10.3168/jds.2017-14195

Schoderboeck, L., Wicky, H. E., Abraham, W. C., & Hughes, S. M. (2018). Genetic targeting and chemogenetic inhibition of new born neurons. Human Gene Therapy Methods. Advance online publication. doi: 10.1089/hgtb.2018.182

Deo, N., El-Hoss, J., Kolind, M., Mikulec, K., Peacock, L., Little, D. G., & Schindeler, A. (2018). JNK inhibitor CC-930 reduces fibrosis in a murine model of Nf1-deficient fracture repair. Journal of Applied Biomedicine. Advance online publication. doi: 10.1016/j.jab.2018.01.006

Jones, L. M., & Legge, M. (2018). Plasma fatty acids as markers for desaturase and elongase activities in spinal cord injured males. Journal of Spinal Cord Medicine. Advance online publication. doi: 10.1080/10790268.2017.1405154

Talaroa, G., Harbison-Price, N., Ferguson, S. A., Carter, G. P., Williamson, D. A., Macknight, R. C., Cook, G. M., & Helkal, A. (2018). Complete genome sequence of a New Zealand isolate of the bovine pathogen Streptococcus uberis. Genome Announcements, 6(9), e00119-18. doi: 10.1128/genomeA.00119-18

Tan, V. T. Y., Mockett, B. G., Ohline, S. M., Parfitt, K. D., Wicky, H. E., Peppercorn, K., Schoderboeck, L., Yahaya, M. F. b., Tate, W. P., Hughes, S. M., & Abraham, W. C. (2018). Lentivirus-mediated expression of human secreted amyloid precursor protein-alpha prevents development of memory and plasticity deficits in a mouse model of Alzheimer's disease. Molecular Brain, 11, 7. doi: 10.1186/s13041-018-0348-9

Wheeler, N. E., Gardner, P. P., & Barquist, L. (2018). Machine learning identifies signatures of host adaptation in the bacterial pathogen Salmonella enterica. PLoS Genetics, 14(5), e1007333. doi: 10.1371/journal.pgen.1007333

Liu, Y.-F., Oey, I., Bremer, P., Silcock, P., & Carne, A. (2018). Proteolytic pattern, protein breakdown and peptide production of ovomucin-depleted egg white processed with heat or pulsed electric fields at different pH. Food Research International, 108, 465-474. doi: 10.1016/j.foodres.2018.03.075

Stadler, T., Gavryushkina, A., Warnock, R. C. M., Drummond, A. J., & Heath, T. A. (2018). The fossilized birth-death model for the analysis of stratigraphic range data under different speciation modes. Journal of Theoretical Biology, 447, 41-55. doi: 10.1016/j.jtbi.2018.03.005

Burrow, K., Young, W., McConnell, M., Carne, A., & Bekhit, A. E.-D. (2018). Do dairy minerals have a positive effect on bone health? Comprehensive Reviews in Food Science & Food Safety, 17(4), 989-1005. doi: 10.1111/1541-4337.12364

Nicholson, T. J., Jackson, S. A., Croft, B. I., Staals, R. H. J., Fineran, P. C., & Brown, C. M. (2018). Bioinformatic evidence of widespread priming in Type I and II CRISPR-Cas systems. RNA Biology. Advance online publication. doi: 10.1080/15476286.2018.1509662

Mitchell, N. L., Russell, K. N., Wellby, M. P., Wicky, H. E., Schoderboeck, L., Barrell, G. K., Melzer, T. R., … Hughes, S. M., & Palmer, D. N. (2018). Longitudinal in vivo monitoring of CNS demonstrates the efficacy of gene therapy in a sheep model of CLN5 Batten disease. Molecular Therapy. Advance online publication. doi: 10.1016/j.ymthe.2018.07.015

Khosa, J., Lee, R., Joshi, S., Shaw, M., McCallum, J., & Macknight, R. (2018). A guide for the cultivation of onion under controlled environment conditions. HortScience, 53(12), 1746-1749. doi: 10.21273/HORTSCI13515-18

Mackay, A., & Tate, W. P. (2018). A compromised paraventricular nucleus within a dysfunctional hypothalamus: A novel neuroinflammatory paradigm for ME/CFS. International Journal of Immunopathology & Pharmacology. Advance online publication. doi: 10.1177/2058738418812342

Gosling, A. L., Boocock, J., Dalbeth, N., Harré Hindmarsh, J., Stamp, L. K., Stahl, E. A., … Matisoo-Smith, E. A., & Merriman, T. R. (2018). Mitochondrial genetic variation and gout in Māori and Pacific people living in Aotearoa New Zealand. Annals of the Rheumatic Diseases, 77(4), 571-578. doi: 10.1136/annrheumdis-2017-212416

Mastropasqua, M. C., Lamont, I., Martin, L. W., Reid, D. W., D'Orazio, M., & Battistoni, A. (2018). Efficient zinc uptake is critical for the ability of Pseudomonas aeruginosa to express virulence traits and colonize the human lung. Journal of Trace Elements in Medicine & Biology, 48, 74-80. doi: 10.1016/j.jtemb.2018.03.009

Budhidarmo, R., Zhu, J., Middleton, A. J., & Day, C. L. (2018). The RING domain of RING Finger 11 (RNF11) protein binds Ubc13 and inhibits formation of polyubiquitin chains. FEBS Letters. Advance online publication. doi: 10.1002/1873-3468.13029

Wright, D. F. B., Dalbeth, N., Phipps-Green, A. J., Merriman, T. R., Barclay, M. L., Drake, J., … Stamp, L. K. (2018). The impact of diuretic use and ABCG2 genotype on the predictive performance of a published allopurinol dosing tool. British Journal of Clinical Pharmacology, 84(5), 937-943. doi: 10.1111/bcp.13516

Matisoo-Smith, E., & Gosling, A. L. (2018). Walking backwards into the future: The need for a holistic evolutionary approach in Pacific health research. Annals of Human Biology, 45(3), 175-187. doi: 10.1080/03014460.2018.1448889

Poynton, H. C., Hasenbein, S., Benoit, J. B., Sepulveda, M., Poelchau, M. F., Hughes, D. S. T., … Cridge, A. G., … Richards, S. (2018). The toxicogenome of Hyalella azteca: A model for sediment ecotoxicology and evolutionary toxicology. Environmental Science & Technology, 52(10), 6009-6022. doi: 10.1021/acs.est.8b00837

Ohline, S. M., Wake, K. L., Hawkridge, M.-V., Dinnunhan, M. F., Hegemann, R. U., Wilson, A., Schoderboeck, L., Logan, B. J., … Hughes, S. M., & Abraham, W. C. (2018). Adult-born dentate granule cell excitability depends on the interaction of neuron age, ontogenetic age and experience. Brain Structure & Function. Advance online publication. doi: 10.1007/s00429-018-1685-2

Manning, P. J., Grattan, D., Merriman, T., Manning, T., Williams, S., & Sutherland, W. (2018). Pharmaceutical interventions for weight-loss maintenance: No effect from cabergoline. International Journal of Obesity. Advance online publication. doi: 10.1038/s41366-018-0165-3

Lacey, C. J., Doudney, K., Bridgman, P. G., George, P. M., Mulder, R. T., Zarifeh, J. J., Kimber, B., Cadzow, M. J., Black, M. A., Merriman, T. R., … Pearson, J. F., Cameron, V. A., & Kennedy, M. A. (2018). Copy number variants implicate cardiac function and development pathways in earthquake-induced stress cardiomyopathy. Scientific Reports, 8, 7548. doi: 10.1038/s41598-018-25827-5

Wan Taib, W. R., Adanan, M., Yunus, N. M., Lin, T. H., Ghazali, W. S. W., Phipps-Green, A. J., & Merriman, T. R. (2018). Association of solute carrier family 2, member 9 (SLC2A9) genetic variant rs3733591 with gout in a Malay sample set. Medical Journal of Malaysia, 73(5), 307-310.

Hou, Y., Vasileva, E. A., Carne, A., McConnell, M., Bekhit, A. E.-D. A., & Mishchenko, N. P. (2018). Naphthoquinones of the spinochrome class: Occurrence, isolation, biosynthesis and biomedical applications [Review]. RSC Advances, 8(57), 32637-32650. doi: 10.1039/c8ra04777d

Conner, T. S., McFarlane, K. G., Choukri, M., Riordan, B. C., Flett, J. A. M., Phipps-Green, A. J., Topless, R. K., Merriman, M. E., & Merriman, T. R. (2018). The oxytocin receptor gene (OXTR) variant rs53576 is not related to emotional traits or states in young adults [Brief research report]. Frontiers in Psychology, 9, 2548. doi: 10.3389/fpsyg.2018.02548

Armisén, D., Rajakumar, R., Friedrich, M., Benoit, J. B., Robertson, H. M., Panfilio, K. A., … Cridge, A. G., … Khila, A. (2018). The genome of the water strider Gerris buenoi reveals expansions of gene repertoires associated with adaptations to life on the water. BMC Genomics, 19, 832. doi: 10.1186/s12864-018-5163-2

Ayana, M., Vlaminck, J., Cools, P., Ame, S., Albonico, M., Dana, D., … Sowerby, S., … Levecke, B. (2018). Modification and optimization of the FECPAK^G2 protocol for the detection and quantification of soil-transmitted helminth eggs in human stool. PLoS Neglected Tropical Diseases, 12(10), e0006655. doi: 10.1371/journal.pntd.0006655

Fellner, M., Hausinger, R. P., & Hu, J. (2018). A structural perspective on the PP-loop ATP pyrophosphatase family. Critical Reviews in Biochemistry & Molecular Biology, 53(6), 607-622. doi: 10.1080/10409238.2018.1516728

Forester, N. T., Lane, G. A., Steringa, M., Lamont, I. L., & Johnson, L. J. (2018). Contrasting roles of fungal siderophores in maintaining iron homeostasis in Epichloë festucae. Fungal Genetics & Biology, 111, 60-72. doi: 10.1016/j.fgb.2017.11.003

Mortuza, R., Aung, H. L., Taiaroa, G., Opel-Reading, H. K., Kleffmann, T., Cook, G. M., & Krause, K. L. (2018). Overexpression of a newly identified d-amino acid transaminase in Mycobacterium smegmatis complements glutamate racemase deletion. Molecular Microbiology, 107(2), 198-213. doi: 10.1111/mmi.13877

Chen, S., Nimick, M., Cridge, A. G., Hawkins, B. C., & Rosengren, R. J. (2018). Anticancer potential of novel curcumin analogs towards castrate-resistant prostate cancer. International Journal of Oncology, 52(2), 579-588. doi: 10.3892/ijo.2017.4207

Saunus, J. M., Smart, C. E., Kutasovic, J. R., Johnston, R. L., Kalita-de Croft, P., Miranda, M., … Sarkar, D., … Lakhani, S. R. (2018). Multidimensional phenotyping of breast cancer cell lines to guide preclinical research. Breast Cancer Research & Treatment, 167(1), 289-301. doi: 10.1007/s10549-017-4496-x

Pirro, M., Bianconi, V., Schiaroli, E., Francisci, D., Mannarino, M. R., Bagaglia, F., … Merriman, T., & Baldelli, F. (2018). Elevated serum uric acid levels are associated with endothelial dysfunction in HIV patients receiving highly-active antiretroviral therapy. Atherosclerosis, 272, 101-107. doi: 10.1016/j.atherosclerosis.2018.03.031

Arun, G., Diermeier, S. D., & Spector, D. L. (2018). Therapeutic targeting of long non-coding RNAs in cancer. Trends in Molecular Medicine, 24(3), 257-277. doi: 10.1016/j.molmed.2018.01.001

Ton, K. N., Cree, S. L., Gronert-Sum, S. J., Merriman, T. R., Stamp, L. K., & Kennedy, M. A. (2018). Multiplexed nanopore sequencing of HLA-B locus in Māori and Pacific Island samples. Frontiers in Genetics. Advance online publication. doi: 10.3389/fgene.2018.00152

Stovall, W. R., Taylor, H. R., Black, M., Grosser, S., Rutherford, K., & Gemmell, N. J. (2018). Genetic sex assignment in wild populations using genotyping‐by‐sequencing data: A statistical threshold approach. Molecular Ecology Resources, 18(2), 179-190. doi: 10.1111/1755-0998.12767

Lawrence, B., Blenkiron, C., Parker, K., Tsai, P., Fitzgerald, S., Shields, P., … Black, M., … Morrin, H., … Jackson, C., … Print, C. (2018). Recurrent loss of heterozygosity correlates with clinical outcome in pancreatic neuroendocrine cancer. npj Genomic Medicine, 3, 18. doi: 10.1038/s41525-018-0058-3

Greig, K., Gosling, A., Collins, C. J., Boocock, J., McDonald, K., Addison, D. J., … Higham, C. F. W., … Walter, R., & Matisoo-Smith, E. (2018). Complex history of dog (Canis familiaris) origins and translocations in the Pacific revealed by ancient mitogenomes. Scientific Reports, 8, 9130. doi: 10.1038/s41598-018-27363-8

Wu, R., Wang, T., Allan, A. C., Macknight, R. C., & Varkonyi-Gasic, E. (2018). Overexpression of both AcSVP1 and AcSVP4 delays budbreak in kiwifruit A. chinensis var. deliciosa, but only AcSVP1 delays flowering in model plants. Environmental & Experimental Botany, 153, 262-270. doi: 10.1016/j.envexpbot.2018.06.010

Lim, C. S., & Brown, C. M. (2018). Know your enemy: Successful bioinformatic approaches to predict functional RNA structures in viral RNAs. Frontiers in Microbiology, 8, 2582. doi: 10.3389/fmicb.2017.02582

Figueiredo, J., Melo, S., Gamet, K., Godwin, T., Seixas, S., Sanches, J. M., Guilford, P., & Seruca, R. (2018). E-cadherin signal sequence disruption: A novel mechanism underlying hereditary cancer. Molecular Cancer, 17, 112. doi: 10.1186/s12943-018-0859-0

Dickie, I. A., Boyer, S., Buckley, H., Duncan, R. P., Gardner, P., Hogg, I. D., … Morales, S. E., … Weaver, L. (2018). Towards robust and repeatable sampling methods in eDNA based studies. Molecular Ecology Resources. Advance online publication. doi: 10.1111/1755-0998.12907

Dalbeth, N., Phipps-Green, A., Frampton, C., Neogi, T., Taylor, W. J., & Merriman, T. R. (2018). Relationship between serum urate concentration and clinically evident incident gout: An individual participant data analysis [Concise report]. Annals of the Rheumatic Diseases, 77(7), 1048-1052. doi: 10.1136/annrheumdis-2017-212288

Eaton-Rye, J. J. (2018). Govindjee: A lifetime in photosynthesis. Photosynthesis Research. Advance online publication. doi: 10.1007/s11120-018-0592-y

Eaton-Rye, J. J. (2018). Foreword. Photosynthetica, 56(1), 1-10. doi: 10.1007/s11099-018-0796-6

Taiaroa, G., Samuelsen, Ø., Kristensen, T., Økstad, O. A. L., & Heikal, A. F. (2018). Complete genome sequence of Pseudomonas aeruginosa K34-7, a carbapenem-resistant isolate of the high-risk sequence type 233. Microbiology Resource Announcements, 7(4), e00886-18. doi: 10.1128/MRA.00886-18

Tate, W. P., Cridge, A. G., & Brown, C. M. (2018). 'Stop' in protein synthesis is modulated with exquisite subtlety by an extended RNA translation signal. Biochemical Society Transactions. Advance online publication. doi: 10.1042/bst20180190

Stamp, L. K., Merriman, T. R., & Singh, J. A. (2018). Expert opinion on emerging urate-lowering therapies. Expert Opinion on Emerging Drugs. Advance online publication. doi: 10.1080/14728214.2018.1527899

Ledgerwood, E. C., Dunstan-Harrison, C., Ong, L., & Morison, I. M. (2018). CYCS gene variants associated with thrombocytopenia. Platelets. Advance online publication. doi: 10.1080/09537104.2018.1543866

Stamp, L. K., Merriman, T., Frampton, C., Zhang, M., Wallace, M., Miner, J. N., & Dalbeth, N. (2018). Plasma oxypurinol as a measure of adherence in clinical trials. Annals of the Rheumatic Diseases, 77(2), 313-314. doi: 10.1136/annrheumdis-2016-210661

Merriman, T. R., & Wilcox, P. L. (2018). Cardio-metabolic disease genetic risk factors among Māori and Pacific Island people in Aotearoa New Zealand: Current state of knowledge and future directions. Annals of Human Biology, 45(3), 202-214. doi: 10.1080/03014460.2018.1461929

Major, T. J., Dalbeth, N., Stahl, E. A., & Merriman, T. R. (2018). An update on the genetics of hyperuricaemia and gout. Nature Reviews Rheumatology. Advance online publication. doi: 10.1038/s41584-018-0004-x

Sumpter, N., Butler, M., & Poulter, R. (2018). Single-phase PacBio de novo assembly of the genome of the chytrid fungus Batrachochytrium dendrobatidis, a pathogen of amphibia. Microbiology Resource Announcements, 7(21), e01348. doi: 10.1128/MRA.01348-18

Stamp, L. K., Wallace, M., Roberts, R. L., Frampton, C., Miner, J. N., Merriman, T. R., & Dalbeth, N. (2018). ABCG2 rs2231142 (Q141K) and oxypurinol concentrations in people with gout receiving allopurinol. Drug Metabolism & Pharmacokinetics, 33(6), 241-242. doi: 10.1016/j.dmpk.2018.09.002

Stamp, L. K., Topless, R., Miner, J. N., Dalbeth, N., & Merriman, T. (2018). No association between ATP-binding cassette transporter G2 rs2231142 (Q141K) and urate-lowering response to febuxostat. Rheumatology. Advance online publication. doi: 10.1093/rheumatology/key423

Liu, Y.-F., Oey, I., Bremer, P., Carne, A., & Silcock, P. (2018). Bioactive peptides derived from egg proteins: A review. Critical Reviews in Food Science & Nutrition, 58(15), 2508-2530. doi: 10.1080/10408398.2017.1329704

Gurney, J. K., Stanley, J., McGlynn, K., Richiardi, L., Shaw, C., Edwards, R., Merriman, T. R., Robson, B., … McLeod, M., Kennedy, M. A., & Sarfati, D. (2018). Testicular Cancer in New Zealand (TCNZ) study: Protocol for a national case-control study. BMJ Open, 8, e025212. doi: 10.1136/bmjopen-2018-025212

Major, T. J., Krishnan, M., Topless, R. K., Dewes, O., Thompson, J., de Zoysa, J., Stamp, L. K., … Wilcox, P., Grattan, D., … Merriman, T. R. (2018). Re: "Widespread prevalence of a CREBRF variant among Māori and Pacific children is associated with weight and height in early childhood". International Journal of Obesity & Related Metabolic Disorders, 42, 1389-1391. doi: 10.1038/s41366-018-0025-1

Robertson, S. P., Harré Hindmarsh, J., Berry, S., Cameron, V. A., Cox, M. P., Dewes, O., … Matisoo-Smith, E., … Sika-Paotonu, D., … Merriman, T. R., … Wilcox, P. (2018). Genomic medicine must reduce, not compound, health inequities: The case for hauora-enhancing genomic resources for New Zealand. New Zealand Medical Journal, 131(1480), 81-89. Retrieved from https://www.nzma.org.nz/journal

Keats, T., Rosengren, R. J., & Ashton, J. C. (2018). The rationale for repurposing sildenafil for lung cancer treatment. Anti-Cancer Agents in Medicinal Chemistry, 18(3), 367-374. doi: 10.2174/1871520617666171103100959

Dearden, P. K., Gemmell, N. J., Mercier, O. R., Lester, P. J., Scott, M. J., Newcomb, R. D., … Penman, D. R. (2018). The potential for the use of gene drives for pest control in New Zealand: A perspective. Journal of the Royal Society of New Zealand, 48(4), 225-244. doi: 10.1080/03036758.2017.1385030

Liu, Y.-F., Oey, I., Bremer, P., Carne, A., & Silcock, P. (2017). Effects of pH, temperature and pulsed electric fields on the turbidity and protein aggregation of ovomucin-depleted egg white. Food Research International, 91, 161-170. doi: 10.1016/j.foodres.2016.12.005

Mros, S., Carne, A., Ha, M., Bekhit, A. E.-D., Young, W., & McConnell, M. (2017). Comparison of the bioactivity of whole and skimmed digested sheep milk with that of digested goat and cow milk in functional cell culture assays. Small Ruminant Research, 149, 202-208. doi: 10.1016/j.smallrumres.2017.02.018

Wu, R., Tomes, S., Karunairetnam, S., Tustin, S. D., Hellens, R. P., Allan, A. C., Macknight, R. C., & Varkonyi-Gasic, E. (2017). SVP-like MADS box genes control dormancy and budbreak in apple. Frontiers in Plant Science, 8, 477. doi: 10.3389/fpls.2017.00477

Shewaramani, S., Finn, T. J., Leahy, S. C., Kassen, R., Rainey, P. B., & Moon, C. D. (2017). Anaerobically grown Escherichia coli has an enhanced mutation rate and distinct mutational spectra. PLoS Genetics, 13(1), e1006570. doi: 10.1371/journal.pgen.1006570

Weijman, J. F., Kumar, A., Jamieson, S. A., King, C. M., Caradoc-Davies, T. T., Ledgerwood, E. C., … Mace, P. D. (2017). Structural basis of autoregulatory scaffolding by apoptosis signal-regulating kinase 1. PNAS, 114(11), E2096-E2105. doi: 10.1073/pnas.1620813114

Summers, E. L., Cumming, M. H., Oulavallickal, T., Roberts, N. J., & Arcus, V. L. (2017). Structures and kinetics for plant nucleoside triphosphate diphosphohydrolases support a domain motion catalytic mechanism. Protein Science, 26(8), 1627-1638. doi: 10.1002/pro.3199

Higashino, T., Takada, T., Nakaoka, H., Toyoda, Y., Stiburkova, B., Miyata, H., … Merriman, T. R., … Matsuo, H. (2017). Multiple common and rare variants of ABCG2 cause gout. RMD Open, 3(2), e000464. doi: 10.1136/rmdopen-2017-000464

Roberts, R. L., Wallace, M. C., Phipps-Green, A. J., Topless, R., Drake, J. M., Tan, P., … Merriman, T. R., & Stamp, L. K. (2017). ABCG2 loss-of-function polymorphism predicts poor response to allopurinol in patients with gout. Pharmacogenomics Journal, 17, 201-203. doi: 10.1038/tpj.2015.101

Best, H. L., Neverman, N. J., Wicky, H. E., Mitchell, N. L., Leitch, B., & Hughes, S. M. (2017). Characterisation of early changes in ovine CLN5 and CLN6 Batten disease neural cultures for the rapid screening of therapeutics. Neurobiology of Disease, 100, 62-74. doi: 10.1016/j.nbd.2017.01.001

Pirro, M., Mannarino, M. R., Bianconi, V., De Vuono, S., Sahebkar, A., Bagaglia, F., … Merriman, T. (2017). Uric acid and bone mineral density in postmenopausal osteoporotic women: The link lies within the fat. Osteoporosis International, 28(3), 973-981. doi: 10.1007/s00198-016-3792-3

Todd, A. S., Walker, R. J., MacGinley, R. J., Kelly, J., Merriman, T. R., Major, T. J., & Johnson, R. J. (2017). Dietary sodium modifies serum uric acid concentrations in humans. American Journal of Hypertension, 30(12), 1196-1202. doi: 10.1093/ajh/hpx123

Khan, A. A., Randhawa, M. A., Carne, A., Ahmed, I. A. M., Barr, D., Reid, M., & Bekhit, A. E.-D. A. (2017). Effect of low and high pulsed electric field on the quality and nutritional minerals in cold boned beef M. longissimus et lumborum. Innovative Food Science & Emerging Technologies, 41, 135-143. doi: 10.1016/j.ifset.2017.03.002

Lawrence, S. A., Armstrong, C. B., Patrick, W. M., & Gerth, M. L. (2017). High-throughput chemical screening identifies compounds that inhibit different stages of the Phytophthora agathidicida and Phytophthora cinnamomi life cycles. Frontiers in Microbiology, 8, 1340. doi: 10.3389/fmicb.2017.01340

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Pushparajan, C., Claus, J. D., Marshall, S. D. G., & Visnovsky, G. (2017). Nutritional demands and metabolic characteristics of the DSIR-HA-1179 insect cell line during growth and infection with the Oryctes nudivirus. In Vitro Cellular & Developmental Biology: Animal, 53(10), 908-912. doi: 10.1007/s11626-017-0206-6

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Christensen, E. M., Patel, S. M., Korasick, D. A., Campbell, A. C., Krause, K. L., Becker, D. F., & Tanner, J. J. (2017). Resolving the cofactor-binding site in the proline biosynthetic enzyme human pyrroline-5-carboxylate reductase 1. Journal of Biological Chemistry, 292(17), 7233-7243. doi: 10.1074/jbc.M117.780288

Gerth, M. L., Liu, Y., Jiao, W., Zhang, X.-X., Baker, E. N., Lott, J. S., … Johnston, J. M. (2017). Crystal structure of a bicupin protein HutD involved in histidine utilization in Pseudomonas. Proteins, 85(8), 1580-1588. doi: 10.1002/prot.25303

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Wharton, D. A., Marshall, C. J., & Egeter, B. (2017). Comparisons between two Antarctic nematodes: Cultured Panagrolaimus sp. DAW1 and field-sourced Panagrolaimus davidi. Nematology, 19(5), 533-542. doi: 10.1163/15685411-00003066

Edgar, R. J., Hampton, G. E., Casas Garcia, G. P., Maher, M. J., Perugini, M. A., Ackerley, D. F., & Lamont, I. L. (2017). Integrated activities of two alternative sigma factors coordinate iron acquisition and uptake by Pseudomonas aeruginosa. Molecular Microbiology, 106(6), 891-904. doi: 10.1111/mmi.13855

Wu, C., Jordan, M. D., Newcomb, R. D., Gemmell, N. J., Bank, S., Meusemann, K., Dearden, P. K., … Buckley, T. R. (2017). Analysis of the genome of the New Zealand giant collembolan (Holacanthella duospinosa) sheds light on hexapod evolution. BMC Genomics, 18, 795. doi: 10.1186/s12864-017-4197-1

Saha, S., Hosmani, P. S., Villalobos-Ayala, K., Miller, S., Shippy, T., Flores, M., … Cridge, A., … Brown, S. J. (2017). Improved annotation of the insect vector of citrus greening disease: Biocuration by a diverse genomics community. Database, 2017, bax032. doi: 10.1093/database/bax032

Morris, J. N., Eaton-Rye, J. J., & Summerfield, T. C. (2017). Phenotypic variation in wild-type substrains of the model cyanobacterium Synechocystis sp. PCC 6803. New Zealand Journal of Botany, 55(1), 25-35. doi: 10.1080/0028825X.2016.1231124

Ledgerwood, E. C., Marshall, J. W. A., & Weijman, J. F. (2017). The role of peroxiredoxin 1 in redox sensing and transducing. Archives of Biochemistry & Biophysics, 617, 60-67. doi: 10.1016/j.abb.2016.10.009

Lamping, E., Zhu, J.-y., Niimi, M., & Cannon, R. D. (2017). Role of ectopic gene conversion in the evolution of a Candida krusei pleiotropic drug resistance transporter family. Genetics, 205(4), 1619-1639. doi: 10.1534/genetics.116.194811

Ferla, M. P., Brewster, J. L., Hall, K. R., Evans, G. B., & Patrick, W. M. (2017). Primordial-like enzymes from bacteria with reduced genomes. Molecular Microbiology, 105(4), 508-524. doi: 10.1111/mmi.13737

Merriman, T. (2017). Genomic Influences on hyperuricemia and gout. Rheumatic Disease Clinics of North America, 43(3), 389-399. doi: 10.1016/j.rdc.2017.04.004

Liu, Y.-F., Oey, I., Bremer, P., Silcock, P., & Carne, A. (2017). In vitro peptic digestion of ovomucin-depleted egg white affected by pH, temperature and pulsed electric fields. Food Chemistry, 231, 165-174. doi: 10.1016/j.foodchem.2017.03.136

Xiong, M., Jones, O. D., Peppercorn, K., Ohline, S. M., Tate, W. P., & Abraham, W. C. (2017). Secreted amyloid precursor protein-alpha can restore novel object location memory and hippocampal LTP in aged rats. Neurobiology of Learning & Memory, 138, 291-299. doi: 10.1016/j.nlm.2016.08.002

Ellison-Loschmann, L., Sporle, A., Corbin, M., Cheng, S., Harawira, P., Gray, M., … Guilford, P., … Pearce, N. (2017). Risk of stomach cancer in Aotearoa/New Zealand: A Māori population based case-control study. PLoS ONE, 12(7), e0181581. doi: 10.1371/journal.pone.0181581

Lee, S. L. J., Horsfield, J. A., Black, M. A., Rutherford, K., Fisher, A., & Gemmell, N. J. (2017). Histological and transcriptomic effects of 17α-methyltestosterone on zebrafish gonad development. BMC Genomics, 18, 557. doi: 10.1186/s12864-017-3915-z

Cridge, A. G., Lovegrove, M. R., Skelly, J. G., Taylor, S. E., Petersen, G. E. L., Cameron, R. C., & Dearden, P. K. (2017). The honeybee as a model insect for developmental genetics. Genesis, 55(5), e23019. doi: 10.1002/dvg.23019

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Dalbeth, N., Allan, J., Gamble, G. D., Phipps-Green, A., Flynn, T. J., Mihov, B., … Stamp, L. K., & Merriman, T. R. (2017). Influence of genetic variants on renal uric acid handling in response to frusemide: An acute intervention study. RMD Open, 3(1), e000424. doi: 10.1136/rmdopen-2016-000424

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Chung, I.-M., Rahuman, A. A., Marimuthu, S., Kirthi, A. V., Anbarasan, K., Parthasarathy, P., & Rajakumar, G. (2017). Green synthesis of copper nanoparticles using Eclipta prostrata leaves extract and their antioxidant and cytotoxic activities. Experimental & Therapeutic Medicine, 14(1), 18-24. doi: 10.3892/etm.2017.4466

Rasheed, H., Stamp, L. K., Dalbeth, N., & Merriman, T. R. (2017). Interaction of the GCKR and A1CF loci with alcohol consumption to influence the risk of gout. Arthritis Research & Therapy, 19, 161. doi: 10.1186/s13075-017-1369-y

Oulavallickal, T., Brewster, J. L., McKellar, J. L. O., Fairhurst, M. J., Tenci, N. A., & Gerth, M. L. (2017). The Pseudomonas syringae pv. actinidiae chemoreceptor protein F (PscF) periplasmic sensor domain: Cloning, purification and X-ray crystallographic analysis. Acta Crystallographica Section F, 73(12), 701-705. doi: 10.1107/s2053230x17016831

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Poulter, R., Taiaroa, G., Sumpter, N., Stockwell, P., & Butler, M. (2017). Complete genome sequence of the kiwifruit pathogen Pseudomonas syringae pv. actinidiae biovar 5, originating from Japan. Genome Announcements, 5(50), e01409-17. doi: 10.1128/genomeA.01409-17

Ong, L., McDonald, K. O., & Ledgerwood, E. C. (2017). Differentiation and cell density upregulate cytochrome c levels in megakaryoblastic cell lines: Implications for analysis of CYCS-associated thrombocytopenia. PLoS ONE, 12(12), e0190433. doi: 10.1371/journal.pone.0190433

Prat, A., Lluch, A., Turnbull, A. K., Dunbier, A. K., Calvo, L., Albanell, J., … Alba, E. (2017). A PAM50-based chemoendocrine score for hormone receptor-positive breast cancer with an intermediate risk of relapse. Clinical Cancer Research, 23(12). doi: 10.1158/1078-0432.ccr-16-2092

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Phipps-Green, A. J., Merriman, M. E., Topless, R., Altaf, S., Montgomery, G. W., Franklin, C., Jones, G. T., van Rij, A. M., … Stamp, L. K., … Merriman, T. R. (2016). Twenty-eight loci that influence serum urate levels: Analysis of association with gout. Annals of the Rheumatic Diseases, 75, 124-130. doi: 10.1136/annrheumdis-2014-205877

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Haddadian, Z., Bremer, P., Eyres, G. T., Carne, A., & Everett, D. W. (2016). The impact of cream churning conditions on xanthine oxidase activity and oxidation-reduction potential in model emulsion systems. International Dairy Journal, 60, 55-61. doi: 10.1016/j.idairyj.2016.01.017

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Biswas, A., Staals, R. H. J., Morales, S. E., Fineran, P. C., & Brown, C. M. (2016). CRISPRDetect: A flexible algorithm to define CRISPR arrays. BMC Genomics, 17, 356. doi: 10.1186/s12864-016-2627-0

Crawford, T. S., Hanning, K. R., Chua, J. P. S., Eaton-Rye, J. J., & Summerfield, T. C. (2016). Comparison of D1´- and D1-containing PS II reaction centre complexes under different environmental conditions in Synechocystis sp. PCC 6803. Plant, Cell & Environment, 39, 1715-1726. doi: 10.1111/pce.12738

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Chatterjee, A., Stockwell, P. A., Rodger, E. J., & Morison, I. M. (2016). Genome-scale DNA methylome and transcriptome profiling of human neutrophils. Scientific Data, 3, 160019. doi: 10.1038/sdata.2016.19

Papetti, C., Windisch, H. S., La Mesa, M., Lucassen, M., Marshall, C., & Lamare, M. D. (2016). Non-Antarctic notothenioids: Past phylogenetic history and contemporary phylogeographic implications in the face of environmental changes. Marine Genomics, 25. doi: 10.1016/j.margen.2015.11.007

Wright, D. F. B., Duffull, S. B., Merriman, T. R., Dalbeth, N., Barclay, M. L., & Stamp, L. K. (2016). Predicting allopurinol response in patients with gout. British Journal of Clinical Pharmacology, 81(2), 277-289. doi: 10.1111/bcp.12799

Dalbeth, N., Merriman, T. R., & Stamp, L. K. (2016). Gout. Lancet, 388(10055), 2039-2052. doi: 10.1016/S0140-6736(16)00346-9

Rasheed, H., McKinney, C., Stamp, L. K., Dalbeth, N., Topless, R. K., Day, R., … Merriman, T. R. (2016). The toll-like receptor 4 (TLR4) variant rs2149356 and risk of gout in European and Polynesian sample sets. PLoS ONE, 11(1), e0147939. doi: 10.1371/journal.pone.0147939

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van 't Hof, F. N. G., Ruigrok, Y. M., Lee, C. H., Ripke, S., Anderson, G., de Andrade, M., … Jones, G. T., … van Rij, A. M., … Vascular Research Consortium of New Zealand, including Phillips, L. V., Hill, G. B., Williams, M. J. A., Thomson, I. A., Krysa, J., Wilkins, G. T., Merriman, T. R., Lewis, D. R., … de Bakker, P. I. W. (2016). Shared genetic risk factors of intracranial, abdominal, and thoracic aneurysms. Journal of the American Heart Association, 5(7), e002603. doi: 10.1161/jaha.115.002603

Lester, S., Hewitt, A. W., Ruediger, C. D., Bradbury, L., De Smit, E., Wiese, M. D., … Harrison, A., … Merriman, T. R., … Hill, C. L. (2016). PTPN22 R620W minor allele is a genetic risk factor for giant cell arteritis [Short report]. RMD Open, 2, e000246. doi: 10.1136/rmdopen-2016-000246

Hoekendijk, D. J. L., Hill, P. C., & Sowerby, S. J. (2016). Rationale for quality assurance in fecal egg monitoring of soil-transmitted helminthiasis [Perspective]. American Journal of Tropical Medicine & Hygiene, 95(3), 502-504. doi: 10.4269/ajtmh.15-0463

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Legge, M. (2016). A retrospective look at clinical biochemistry in 1957. New Zealand Journal of Medical Laboratory Science, 70(3), 114-116.

López-Isac, E., Martín, J.-E., Assassi, S., Simeón, C. P., Carreira, P., Ortego-Centeno, N., … Merriman, T., … Martín, J. (2016). IRF4 newly identified as a common susceptibility locus for systemic sclerosis and rheumatoid arthritis in a cross-disease meta-analysis of genome-wide association studies [Brief report]. Arthritis & Rheumatology, 68(9), 2338-2344. doi: 10.1002/art.39730

Legge, M., & Fitzgerald, R. (2016). Valuing embryos as both commodities and singularities. New Zealand Medical Journal, 129(1431), 80-84. Retrieved from https://www.nzma.org.nz/journal

Perez-Ruiz, F., Aniel-Quiroga, M. A., Herrero-Beites, A. M., Chinchilla, S. P., Erauskin, G. G., & Merriman, T. (2015). Renal clearance of uric acid is linked to insulin resistance and lower excretion of sodium in gout patients. Rheumatology International, 35(9), 1519-1524. doi: 10.1007/s00296-015-3242-0

Ryder, K., Ha, M., Bekhit, A. E.-D., & Carne, A. (2015). Characterisation of novel fungal and bacterial protease preparations and evaluation of their ability to hydrolyse meat myofibrillar and connective tissue proteins. Food Chemistry, 172, 197-206. doi: 10.1016/j.foodchem.2014.09.061

Turnbull, A. K., Arthur, L. M., Renshaw, L., Larionov, A. A., Kay, C., Dunbier, A. K., … Dixon, J. M. (2015). Accurate prediction and validation of response to endocrine therapy in breast cancer. Journal of Clinical Oncology, 33(20), 2270-2278. doi: 10.1200/jco.2014.57.8963

Ramsay, J. P., Tester, L. G. L., Major, A. S., Sullivan, J. T., Edgar, C. D., Kleffmann, T., … Tate, W. P., … Ronson, C. W. (2015). Ribosomal frameshifting and dual-target antiactivation restrict quorum-sensing–activated transfer of a mobile genetic element. PNAS, 112(3), 4104-4109. doi: 10.1073/pnas.1501574112

Dalbeth, N., Topless, R., Flynn, T., Cadzow, M., Bolland, M. J., & Merriman, T. R. (2015). Mendelian randomization analysis to examine for a causal effect of urate on bone mineral density. Journal of Bone & Mineral Research, 30(6), 985-991. doi: 10.1002/jbmr.2434

Telford, B. J., Chen, A., Beetham, H., Frick, J., Brew, T. P., Gould, C. M., Single, A., Godwin, T., … Guilford, P. (2015). Synthetic lethal screens identify vulnerabilities in GPCR signalling and cytoskeletal organization in E-cadherin-deficient cells. Molecular Cancer Therapeutics, 14(5), 1213-1223. doi: 10.1158/1535-7163.mct-14-1092

Bao, Y., Curhan, G., Merriman, T., Plenge, R., Kraft, P., & Choi, H. K. (2015). Lack of gene—diuretic interactions on the risk of incident gout: The Nurses' Health Study and Health Professionals Follow-up Study. Annals of the Rheumatic Diseases, 74, 1394-1398. doi: 10.1136/annrheumdis-2014-206534

Michailidou, K., Beesley, J., Lindstrom, S., Canisius, S., Dennis, J., Lush, M. J., … kConFab, including Gardner, M., George, P., Kidd, A., Reeve, T., Robinson, B., Walker, L., … Easton, D. F. (2015). Genome-wide association analysis of more than 120,000 individuals identifies 15 new susceptibility loci for breast cancer. Nature Geoscience, 47, 373-380. doi: 10.1038/ng.3242

Tchesnokov, E. P., Fellner, M., Siakkou, E., Kleffmann, T., Martin, L. W., Aloi, S., Lamont, I. L., Wilbanks, S. M., & Jameson, G. N. L. (2015). The cysteine dioxygenase homologue from Pseudomonas aeruginosa is a 3-mercaptopropionate dioxygenase. Journal of Biological Chemistry, 290(40), 24424-24437. doi: 10.1074/jbc.M114.635672

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Cridge, B. J., & Cridge, A. G. (2015). Evaluating how universities engage school students with science: A model based on the analysis of the literature. Australian Universities' Review, 57(1), 34-44.

Mann, M. B., Black, M. A., Jones, D. J., Ward, J. M., Yew, C. C. K., Newberg, J. Y., … Jenkins, N. A. (2015). Transposon mutagenesis identifies genetic drivers of Braf^V600E melanoma. Nature Genetics, 47(5), 486-495. doi: 10.1038/ng.3275

López-Knowles, E., Wilkerson, P. M., Ribas, R., Anderson, H., Mackay, A., Ghazoui, Z., … Dunbier, A. K., … Dowsett, M. (2015). Integrative analyses identify modulators of response to neoadjuvant aromatase inhibitors in patients with early breast cancer. Breast Cancer Research, 17, 35. doi: 10.1186/s13058-015-0532-0

Maddock, D. J., Patrick, W. M., & Gerth, M. L. (2015). Substitutions at the cofactor phosphate-binding site of a clostridial alcohol dehydrogenase lead to unexpected changes in substrate specificity. Protein Engineering, Design & Selection, 28(8), 251-258. doi: 10.1093/protein/gzv028

Nelson, W. A., Sutherland, J. E., Farr, T. J., Hart, D. R., Neill, K. F., Kim, H. J., & Yoon, H. S. (2015). Multi-gene phylogenetic analyses of New Zealand coralline algae: Corallinapetra Novaezelandiae gen. et sp. nov. and recognition of the Hapalidiales ord. nov. Journal of Phycology, 51, 454-468. doi: 10.1111/jpy.12288

Bah, C. S. F., Bekhit, A. E.-D. A., Carne, A., & McConnell, M. A. (2015). Production of bioactive peptide hydrolysates from deer, sheep and pig plasma using plant and fungal protease preparations. Food Chemistry, 176, 54-63. doi: 10.1016/j.foodchem.2014.12.025

Sharpe, M. L., Dearden, P. K., Gimenez, G., & Krause, K. L. (2015). Comparative RNA seq analysis of the New Zealand glowworm Arachnocampa luminosa reveals bioluminescence-related genes. BMC Genomics, 16, 825. doi: 10.1186/s12864-015-2006-2

McKinney, C., Stamp, L. K., Dalbeth, N., Topless, R. K., Day, R. O., Kannangara, D. R. W., … Merriman, T. R. (2015). Multiplicative interaction of functional inflammasome genetic variants in determining the risk of gout. Arthritis Research & Therapy, 17, 288. doi: 10.1186/s13075-015-0802-3

Ooi, E. M., Watts, G. F., Chan, D. C., Pang, J., Tenneti, V. S., Hamilton, S. J., McCormick, S. P., … Barrett, P. H. R. (2015). Effects of extended-release niacin on the postprandial metabolism of Lp(a) and ApoB-100-containing lipoproteins in statin-treated men with type 2 diabetes mellitus. Arteriosclerosis, Thrombosis, & Vascular Biology, 35, 2686-2693. doi: 10.1161/atvbaha.115.306136

Couñago, R. M., Knapp, K. M., Nakatani, Y., Fleming, S. B., Corbett, M., Wise, L. M., Mercer, A. A., & Krause, K. L. (2015). Structures of orf virus chemokine binding protein in complex with host chemokines reveal clues to broad binding specificity. Structure, 23(7), 1199-1213. doi: 10.1016/j.str.2015.04.023

Montefiori, M., Brendolise, C., Dare, A. P., Lin-Wang, K., Davies, K. M., Hellens, R. P., & Allan, A. C. (2015). In the Solanaceae, a hierarchy of bHLHs confer distinct target specificity to the anthocyanin regulatory complex. Journal of Experimental Botany, 66(5), 1427-1436. doi: 10.1093/jxb/eru494

Doecke, J. D., Simms, L. A., Zhao, Z. Z., Roberts, R. L., Fowler, E. V., Croft, A., … Barclay, M. L., Merriman, T. R., Gearry, R. B., … Radford-Smith, G. L. (2015). Smoking behaviour modifies IL23r-associated disease risk in patients with Crohn's disease. Journal of Gastroenterology & Hepatology, 30(2), 299-307. doi: 10.1111/jgh.12674

Cooke, I. R., Laing, C. J., White, L. V., Wakes, S. J., & Sowerby, S. J. (2015). Analysis of menisci formed on cones for single field of view parasite egg microscopy. Journal of Microscopy, 257(2), 133-141. doi: 10.1111/jmi.12192

Flynn, T. J., Cadzow, M., Dalbeth, N., Jones, P. B., Stamp, L. K., Harré Hindmarsh, J., Todd, A. S., Walker, R. J., Topless, R., & Merriman, T. R. (2015). Positive association of tomato consumption with serum urate: Support for tomato consumption as an anecdotal trigger of gout flares. BMC Musculoskeletal Disorders, 16, 196. doi: 10.1186/s12891-015-0661-8

Zhang, H., Luo, M., Day, R. C., Talbot, M. J., Ivanova, A., Ashton, A. R., … Macknight, R. C., … Koltunow, A. M. (2015). Developmentally regulated HEART STOPPER, a mitochondrially targeted L18 ribosomal protein gene, is required for cell division, differentiation, and seed development in Arabidopsis. Journal of Experimental Botany, 66(19), 5867-5880. doi: 10.1093/jxb/erv296

Spencer, E. S., Dale, E. J., Gommans, A. L., Rutledge, M. T., Vo, C. T., Nakatani, Y., Gamble, A. B., Smith, R. A. J., Wilbanks, S. M., Hampton, M. B., & Tyndall, J. D. A. (2015). Multiple binding modes of isothiocyanates that inhibit macrophage migration inhibitory factor. European Journal of Medicinal Chemistry, 93, 501-510. doi: 10.1016/j.ejmech.2015.02.012

Suwandy, V., Carne, A., van de Ven, R., Bekhit, A. E.-D. A., & Hopkins, D. L. (2015). Effect of pulsed electric field treatment on hot-boned muscles of different potential tenderness. Meat Science, 105, 25-31. doi: 10.1016/j.meatsci.2015.02.009

Osborne, A. J., Pearson, J., Negro, S. S., Chilvers, B. L., Kennedy, M. A., & Gemmell, N. J. (2015). Heterozygote advantage at MHC DRB may influence response to infectious disease epizootics. Molecular Ecology, 24, 1419-1432. doi: 10.1111/mec.13128

Jackson, S. A., & Eaton-Rye, J. J. (2015). Characterization of a Synechocystis sp. PCC 6803 double mutant lacking the CyanoP and Ycf48 proteins of Photosystem II. Photosynthesis Research, 124, 217-229. doi: 10.1007/s11120-015-0122-0

Sawaya, S., Boocock, J., Black, M. A., & Gemmell, N. J. (2015). Exploring possible DNA structures in real-time polymerase kinetics using Pacific Biosciences sequencer data. BMC Bioinformatics, 16, 21. doi: 10.1186/s12859-014-0449-0

Newton, M. S., Arcus, V. L., & Patrick, W. M. (2015). Rapid bursts and slow declines: On the possible evolutionary trajectories of enzymes. Journal of the Royal Society Interface, 12(107), 20150036. doi: 10.1098/rsif.2015.0036

Pantham, P., Viall, C. A., Chen, Q., Kleffmann, T., Print, C. G., & Chamley, L. W. (2015). Antiphospholipid antibodies bind syncytiotrophoblast mitochondria and alter the proteome of extruded syncytial nuclear aggregates. Placenta, 36, 1463-1473. doi: 10.1016/j.placenta.2015.10.006

Boocock, J., Chagné, D., Merriman, T. R., & Black, M. A. (2015). The distribution and impact of common copy-number variation in the genome of the domesticated apple, Malus x domestica Borkh. BMC Genomics, 16(1), 848. doi: 10.1186/s12864-015-2096-x

Palmer, D. N., Neverman, N. J., Chen, J. Z., Chang, C.-T., Houweling, P. J., Barry, L. A., … Hughes, S. M., & Mitchell, N. L. (2015). Recent studies of ovine neuronal ceroid lipofuscinoses from BARN, the Batten Animal Research Network. Biochimica et Biophysica Acta: Molecular Basis of Disease, 1852(10, Part B), 2279-2286. doi: 10.1016/j.bbadis.2015.06.013

Lopez-Medina, E., Fan, D., Coughlin, L. A., Ho, E. X., Lamont, I. L., Reimmann, C., … Koh, A. Y. (2015). Candida albicans inhibits Pseudomonas aeruginosa virulence through suppression of pyochelin and pyoverdine biosynthesis. PLoS Pathogens, 11(8), e1005129. doi: 10.1371/journal.ppat.1005129

Bond, D. M., & Baulcombe, D. C. (2015). Epigenetic transitions leading to heritable, RNA-mediated de novo silencing in Arabidopsis thaliana. PNAS, 112(3), 917-922. doi: 10.1073/pnas.1413053112

Li, Y., Telfer, E., & Wilcox, P. L. (2015). New Zealand forestry enters the genomics era: Applications of genomics in tree breeding. New Zealand Journal of Forestry, 60(1), 23-25.

Neverman, N. J., Best, H. L., Hofmann, S. L., & Hughes, S. (2015). Experimental therapies in the neuronal ceroid lipofuscinoses. Biochimica et Biophysica Acta: Molecular Basis of Disease, 1852(10, Part B), 2292-2300. doi: 10.1016/j.bbadis.2015.04.026

Donaldson, A. E., & Lamont, I. L. (2015). Metabolomics of post-mortem blood: Identifying potential markers of post-mortem interval. Metabolomics, 11(1), 237-245. doi: 10.1007/s11306-014-0691-5

Johnson, R. J., Merriman, T., & Lanaspa, M. A. (2015). Causal or noncausal relationship of uric acid with diabetes. Diabetes, 64(8), 2720-2722. doi: 10.2337/db15-0532

Damsteegt, E. L., Falahatimarvast, A., McCormick, S. P. A., & Lokman, P. M. (2015). Triacylglyceride physiology in the short-finned eel, Anguilla australis: Changes throughout early oogenesis. American Journal of Physiology: Regulatory, Integrative & Comparative Physiology, 308(11), R935-R944. doi: 10.1152/ajpregu.00436.2014

Davies, C., Brown, C. M., Westphal, D., Ward, J. M., & Ward, V. K. (2015). Murine norovirus replication induces a G₀/G₁ cell cycle arrest in asynchronous growing cells. Journal of Virology, 89(11), 6057-6066. doi: 10.1128/jvi.03673-14

von Zychlinski, A., & Kleffmann, T. (2015). Dissecting the proteome of lipoproteins: New biomarkers for cardiovascular diseases? Translational Proteomics, 7, 30-39. doi: 10.1016/j.trprot.2014.12.001

Murphy, R., Thornley, S., de Zoysa, J., Stamp, L. K., Dalbeth, N., & Merriman, T. R. (2015). Sugar sweetened beverage consumption among adults with gout or type 2 diabetes. PLoS ONE, 10(5), e0125543. doi: 10.1371/journal.pone.0125543

Suwandy, V., Carne, A., van de Ven, R., Bekhit, A. E.-D. A., & Hopkins, D. L. (2015). Effect of pulsed electric field treatment on the eating and keeping qualities of cold-boned beef loins: Impact of initial pH and fibre orientation. Food & Bioprocess Technology, 8(6), 1355-1365. doi: 10.1007/s11947-015-1498-8

Teh, S.-S., Niven, B. E., Bekhit, A. E.-D. A., Carne, A., & Birch, J. (2015). Optimization of polyphenol extraction and antioxidant activities of extracts from defatted flax seed cake (Linum usitatissimum L.) using microwave-assisted and pulsed electric field (PEF) technologies with response surface methodology. Food Science & Biotechnology, 24(5), 1649-1659. doi: 10.1007/s10068-015-0214-9

Ha, M., Sabherwal, M., Duncan, E., Stevens, S., Stockwell, P., McConnell, M., Bekhit, A. E.-D., & Carne, A. (2015). In-depth characterization of sheep (Ovis aries) milk whey proteome and comparison with cow (Bos taurus). PLoS ONE, 10(10), e0139774. doi: 10.1371/journal.pone.0139774

Ellisdon, A. M., Reboul, C. F., Panjikar, S., Huynh, K., Oelling, C. A., Winter, K. L., … Dearden, P. K., … McGowan, S. (2015). Stonefish toxin defines an ancient branch of the perforin-like superfamily. PNAS, 112(50), 15360-15365. doi: 10.1073/pnas.1507622112

Topless, R. K., Flynn, T. J., Cadzow, M., Stamp, L. K., Dalbeth, N., Black, M. A., & Merriman, T. R. (2015). Association of SLC2A9 genotype with phenotypic variability of serum urate in pre-menopausal women. Frontiers in Genetics, 6, 313. doi: 10.3389/fgene.2015.00313

Freschi, L., Jeukens, J., Kukavica-Ibrulj, I., Boyle, B., Dupont, M.-J., LaRoche, J., … Lamont, I. L., … Levesque, R. C. (2015). Clinical utilization of genomics data produced by the international Pseudomonas aeruginosa consortium. Frontiers in Microbiology, 6, 1036. doi: 10.3389/fmicb.2015.01036

Dupont, P.-Y., Eaton, C. J., Wargent, J. J., Fechtner, S., Solomon, P., Schmid, J., Day, R. C., … Cox, M. P. (2015). Fungal endophyte infection of ryegrass reprograms host metabolism and alters development. New Phytologist, 208(4), 1227-1240. doi: 10.1111/nph.13614

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Seeger-Armbruster, S., Bosch-Bouju, C., Little, S. T. C., Smither, R. A., Hughes, S. M., Hyland, B. I., & Parr-Brownlie, L. C. (2015). Patterned, but not tonic, optogenetic stimulation in motor thalamus improves reaching in acute drug-induced Parkinsonian rats. Journal of Neuroscience, 35(3), 1211-1216. doi: 10.1523/jneurosci.3277-14.2015

Schoderboeck, L., Riad, S., Bokor, A. M., Wicky, H. E., Strauss, M., Bostina, M., Oswald, M. J., Empson, R. M., & Hughes, S. M. (2015). Chimeric rabies SADB19-VSVg-pseudotyped lentiviral vectors mediate long-range retrograde transduction from the mouse spinal cord. Gene Therapy, 22, 357-364. doi: 10.1038/gt.2015.3

Ciarroni, S., Gallipoli, L., Taratufolo, M. C., Butler, M. I., Poulter, R. T., Pourcel, C., … Mazzaglia, A. (2015). Development of a Multiple Loci Variable number of tandem repeats Analysis (MLVA) to unravel the intra-pathovar structure of Pseudomonas syringae pv. actinidiae populations worldwide. PLoS ONE, 10(8), e0135310. doi: 10.1371/journal.pone.0135310

Guy, P. L., Easingwood, R., Carne, D. L., & Kleffmann, T. (2015). Identification of two plant viruses using partial purification and mass spectrometry. Australasian Plant Disease Notes, 10, 11. doi: 10.1007/s13314-015-0162-5

Brownfield, L., Yi, J., Jiang, H., Minina, E. A., Twell, D., & Köhler, C. (2015). Organelles maintain spindle position in plant meiosis. Nature Communications, 6, 6492. doi: 10.1038/ncomms7492

Cridge, A. G., Leask, M. P., Duncan, E. J., & Dearden, P. K. (2015). What do studies of insect polyphenisms tell us about nutritionally-triggered epigenomic changes and their consequences? Nutrients, 7(3), 1787-1797. doi: 10.3390/nu7031787

Sadd, B. M., Barribeau, S. M., Bloch, G., de Graaf, D. C., Dearden, P., Elsik, C. G., … Cridge, A. G., … Duncan, E., … Irvine, F., … Leask, M., Lockett, G. A., … Nair, A., … Blommaert, J., … Worley, K. C. (2015). The genomes of two key bumblebee species with primitive eusocial organization. Genome Biology, 16, 76. doi: 10.1186/s13059-015-0623-3

Parr-Brownlie, L. C., Bosch-Bouju, C., Schoderboeck, L., Sizemore, R. J., Abraham, W. C., & Hughes, S. M. (2015). Lentiviral vectors as tools to understand central nervous system biology in mammalian model organisms. Frontiers in Molecular Neuroscience, 8, 14. doi: 10.3389/fnmol.2015.00014

Suwandy, V., Carne, A., van de Ven, R., Bekhit, A. E.-D. A., & Hopkins, D. L. (2015). Effect of pulsed electric field on the proteolysis of cold boned beef M. Longissimus lumborum and M. Semimembranosus. Meat Science, 100, 222-226. doi: 10.1016/j.meatsci.2014.10.011

Single, A., Beetham, H., Telford, B. J., Guilford, P., & Chen, A. (2015). A comparison of real-time and endpoint cell viability assays for improved synthetic lethal drug validation. Journal of Biomolecular Screening, 20(10), 1286-1293. doi: 10.1177/1087057115605765

Paten, A. M., Duncan, E. J., Pain, S. J., Peterson, S. W., Kenyon, P. R., Blair, H. T., & Dearden, P. K. (2015). Functional development of the adult ovine mammary gland: Insights from gene expression profiling. BMC Genomics, 16, 748. doi: 10.1186/s12864-015-1947-9

Kuchenbaecker, K. B., Ramus, S. J., Tyrer, J., Lee, A., Shen, H. C., Beesley, J., … kConFab, including Gardner, M., George, P., Kidd, A., Reeve, T., Robinson, B., Walker, L., … for the Consortium of Investigators of Modifiers of BRCA1 and BRCA2. (2015). Identification of six new susceptibility loci for invasive epithelial ovarian cancer. Nature Genetics, 47(2), 164-171. doi: 10.1038/ng.3185

Grueber, C. E., Knafler, G. J., King, T. M., Senior, A. M., Grosser, S., Robertson, B., Weston, K. A., … Harris, C. L. W., & Jamieson, I. G. (2015). Toll-like receptor diversity in 10 threatened bird species: Relationship with microsatellite heterozygosity. Conservation Genetics, 16(3), 595-611. doi: 10.1007/s10592-014-0685-x

Jackson, S. A., Eaton-Rye, J. J., Bryant, D. A., Posewitz, M. C., & Davies, F. K. (2015). Dynamics of photosynthesis in the glycogen-deficient glgC mutant of Synechococcus sp. PCC 7002. Applied & Environmental Microbiology, 81(18), 6210-6222. doi: 10.1128/aem.01751-15

Kienhorst, L. B. E., van Lochem, E., Kievit, W., Dalbeth, N., Merriman, M. E., Phipps-Green, A., … Stamp, L. K., … Merriman, T. R., … Radstake, T. R. D. J. (2015). Gout is a chronic inflammatory disease in which high levels of interleukin 8 (CXCL8), myeloid-related protein 8/myeloid-related protein14 complex, and an altered proteome are associated with diabetes mellitus and cardiovascular disease. Arthritis & Rheumatology, 67(12), 3303-3313. doi: 10.1002/art.39318

Khosa, J. S., McCallum, J., Dhatt, A. S., & MacKnight, R. C. (2015). Enhancing onion breeding using molecular tools. Plant Breeding, 9-20. doi: 10.1111/pbr.12330

Najafpour, M. M., Fekete, M., Sedigh, D. J., Aro, E.-M., Carpentier, R., Eaton-Rye, J. J., … Spiccia, L. (2015). Damage management in water-oxidizing catalysts: From photosystem II to nanosized metal oxides. ACS Catalysis, 5(3), 1499-1512. doi: 10.1021/cs5015157

Poulter, R. T. M., & Butler, M. I. (2015). Tyrosine recombinase retrotransposons and transposons. Microbiology Spectrum, 3(2), MDNA3-0036-2014. doi: 10.1128/microbiolspec.MDNA3-0036-2014

Ahmadi, O., Stringer, M. D., Black, M. A., & McCall, J. L. (2015). Clinico-pathological factors influencing lymph node yield in colorectal cancer and impact on survival: Analysis of New Zealand Cancer Registry data. Journal of Surgical Oncology, 11(4), 451-458. doi: 10.1002/jso.23848

Tsukazaki, H., Yaguchi, S., Sato, S., Hirakawa, H., Katayose, Y., Kanamori, H., … McCallum, J. A., … Wako, T. (2015). Development of transcriptome shotgun assembly-derived markers in bunching onion (Allium fistulosum). Molecular Breeding, 35, 55. doi: 10.1007/s11032-015-0265-x

Söderholm, A., Guo, X., Newton, M. S., Evans, G. B., Näsvall, J., Patrick, W. M., & Selmer, M. (2015). Two-step ligand binding in a (βα)₈ barrel enzyme: Substrate-bound structures shed new light on the catalytic cycle of HisA. Journal of Biological Chemistry, 290(41), 24657-24668. doi: 10.1074/jbc.M115.678086

Chambers, C. R., & Patrick, W. M. (2015). Archaeal nucleic acid ligases and their potential in biotechnology. Archaea, 2015, 170571. doi: 10.1155/2015/170571

Liu, H., Lamm, M. S., Rutherford, K., Black, M. A., Godwin, J. R., & Gemmell, N. J. (2015). Large-scale transcriptome sequencing reveals novel expression patterns for key sex-related genes in a sex-changing fish. Biology of Sex Differences, 6, 26. doi: 10.1186/s13293-015-0044-8

Middleton, A. J., & Day, C. L. (2015). The molecular basis of lysine 48 ubiquitin chain synthesis by Ube2K. Scientific Reports, 5, 16793. doi: 10.1038/srep16793

McKellar, J. L. O., Minnell, J. J., & Gerth, M. L. (2015). A high-throughput screen for ligand binding reveals the specificities of three amino acid chemoreceptors from Pseudomonas syringae pv. actinidiae. Molecular Microbiology, 96(4), 694-707. doi: 10.1111/mmi.12964

Hansford, S., Kaurah, P., Li-Chang, H., Woo, M., Senz, J., Pinheiro, H., … Guilford, P., … Huntsman, D. G. (2015). Hereditary diffuse gastric cancer syndrome: CDH1 mutations and beyond. JAMA Oncology, 1(1), 23-32. doi: 10.1001/jamaoncol.2014.168

Marshall, C. W., Chagné, D., Deusch, O., Gruenheit, N., McCallum, J., Bergin, D., … Wilcox, P. L. (2015). A DNA-based diagnostic for differentiating among New Zealand endemic Podocarpus. Tree Genetics & Genomes, 11, 69. doi: 10.1007/s11295-015-0888-4

Merriman, T. R. (2015). An update on the genetic architecture of hyperuricemia and gout. Arthritis Research & Therapy, 17, 98. doi: 10.1186/s13075-015-0609-2

Park, J., Fitzgerald, R., & Legge, M. (2015). The predicament of d/Deaf: Towards an anthropology of not-disability. Human Organization, 74(2), 154-163. doi: 10.17730/0018-7259-74.2.154

Sharma, M., Von Zychlinski-Kleffmann, A., Porteous, C. M., Jones, G. T., Williams, M. J. A., & McCormick, S. P. A. (2015). Lipoprotein (a) upregulates ABCA1 in liver cells via scavenger receptor-B1 through its oxidized phospholipids. Journal of Lipid Research, 56, 1318-1328. doi: 10.1194/jlr.M056150

Suwandy, V., Carne, A., van de Ven, R., Bekhit, A. E.-D. A., & Hopkins, D. L. (2015). Effect of repeated pulsed electric field treatment on the quality of cold-boned beef loins and topsides. Food & Bioprocess Technology, 8(6), 1218-1228. doi: 10.1007/s11947-015-1485-0

Budhidarmo, R., & Day, C. L. (2015). IAPs: Modular regulators of cell signalling. Seminars in Cell & Developmental Biology, 39, 80-90. doi: 10.1016/j.semcdb.2014.12.002

Kasparova, E., Van de Putte, A. P., Marshall, C., & Janko, K. (2015). Lifestyle and ice: The relationship between ecological specialization and response to Pleistocene climate change. PLoS ONE, 10(11), e0138766. doi: 10.1371/journal.pone.0138766

Cardno, T. S., Shimaki, Y., Sleebs, B. E., Lackovic, K., Parisot, J. P., Moss, R. M., Crowe-McAuliffe, C., Mathew, S. F., Edgar, C. D., Kleffmann, T., & Tate, W. P. (2015). HIV-1 and human PEG10 frameshift elements are functionally distinct and distinguished by novel small molecule modulators. PLoS ONE, 10(10), e0139036. doi: 10.1371/journal.pone.0139036

Chatterjee, A., Stockwell, P. A., Rodger, E. J., Duncan, E. J., Parry, M. F., Weeks, R. J., & Morison, I. M. (2015). Genome-wide DNA methylation map of human neutrophils reveals widespread inter-individual epigenetic variation. Scientific Reports, 5, 17328. doi: 10.1038/srep17328

Nath, K., Najafpour, M. M., Voloshin, R. A., Balaghi, S. E., Tyystjärvi, E., Timilsina, R., Eaton-Rye, J. J., … Allakhverdiev, S. I. (2015). Photobiological hydrogen production and artificial photosynthesis for clean energy: From bio to nanotechnologies. Photosynthesis Research, 126(2-3), 237-247. doi: 10.1007/s11120-015-0139-4

Frampton, R. A., Lopez Acedo, E., Young, V. L., Chen, D., Tong, B., Taylor, C., Easingwood, R. A., … Kleffmann, T., Bostina, M., & Fineran, P. C. (2015). Genome, proteome and structure of a T7-like bacteriophage of the kiwifruit canker phytopathogen Pseudomonas syringae pv. actinidiae. Viruses, 7(7), 3361-3379. doi: 10.3390/v7072776

Wilcox, P. L., & Macdonald, L. J. (2015). New Zealand forestry enters the genomics era: Towards a genome sequence of radiata pine. New Zealand Journal of Forestry, 60(1), 17-22.

Cahyani, I., Cridge, A. G., Engelke, D. R., Ganley, A. R. D., & O'Sullivan, J. M. (2015). A sequence-specific interaction between the Saccharomyces cerevisiae rRNA gene repeats and a locus encoding an RNA polymerase I subunit affects ribosomal DNA stability. Molecular & Cellular Biology, 35(3), 544-554. doi: 10.1128/mcb.01249-14

Laing, W. A., Martínez-Sánchez, M., Wright, M. A., Bulley, S. M., Brewster, D., Dare, A. P., … Macknight, R. C., & Hellens, R. P. (2015). An upstream open reading frame Is essential for feedback regulation of ascorbate biosynthesis in Arabidopsis. Plant Cell, 27(3), 772-786. doi: 10.1105/tpc.114.133777

Kohn, Y. Y., Symonds, J. E., Kleffmann, T., Nakagawa, S., Lagisz, M., & Lokman, P. M. (2015). Proteomic analysis of early-stage embryos: Implications for egg quality in hapuku (Polyprion oxygeneios). Fish Physiology & Biochemistry, 41(6), 1403-1417. doi: 10.1007/s10695-015-0095-0

van der Post, R. S., Vogelaar, I. P., Carneiro, F., Guilford, P., Huntsman, D., Hoogerbrugge, N., … Fitzgerald, R. C. (2015). Hereditary diffuse gastric cancer: Updated clinical guidelines with an emphasis on germline CDH1 mutation carriers. Journal of Medical Genetics, 52, 361-374. doi: 10.1136/jmedgenet-2015-103094

Fitzgerald, R. P., Legge, M., & Park, J. (2015). Choice, rights and virtue: Prenatal testing and styles of moral reasoning in Aotearoa/New Zealand. Medical Anthropology Quarterly, 29(3), 400-417. doi: 10.1111/maq.12217

Roberts, R. L., Wallace, M. C., Harrison, A., Dalbeth, N., Merriman, T. R., & Stamp, L. K. (2015). A human leukocyte antigen locus haplotype confers risk for allopurinol-related adverse effects in Caucasian patients with gout. Pharmacogenetics & Genomics, 25(8), 412-415. doi: 10.1097/fpc.0000000000000147

Huffman, J. E., Albrecht, E., Teumer, A., Mangino, M., Kapur, K., Johnson, T., … Phipps-Green, A., … Stamp, L., & . . . (2015). Modulation of genetic associations with serum urate levels by body-mass-index in humans. PLoS ONE, 10(3), e0119752. doi: 10.1371/journal.pone.0119752

Mathew, S. F., Crowe-McAuliffe, C., Graves, R., Cardno, T. S., McKinney, C., Poole, E. S., & Tate, W. P. (2015). The highly conserved codon following the Slippery Sequence Supports -1 frameshift efficiency at the HIV-1 frameshift site. PLoS ONE, 10(3), e0122176. doi: 10.1371/journal.pone.0122176

Murphy, J. M., Nakatani, Y., Jamieson, S. A., Dai, W., Lucet, I. S., & Mace, P. D. (2015). Molecular mechanism of CCAAT-enhancer binding protein recruitment by the TRIB1 pseudokinase. Structure, 23(11), 2111-2121. doi: 10.1016/j.str.2015.08.017

Dearden, P. K. (2015). Origin and evolution of the enhancer of split complex. BMC Genomics, 16, 712. doi: 10.1186/s12864-015-1926-1

Boase, M. R., Brendolise, C., Wang, L., Ngo, H., Espley, R. V., Hellens, R. P., … Albert, N. W. (2015). Failure to launch: The self-regulating Md-MYB10_R6 gene from apple is active in flowers but not leaves of Petunia. Plant Cell Reports, 34(10), 1817-1823. doi: 10.1007/s00299-015-1827-4

Dalbeth, N., Phipps-Green, A., House, M. E., Gamble, G. D., Horne, A., Stamp, L. K., & Merriman, T. R. (2015). Body mass index modulates the relationship of sugar-sweetened beverage intake with serum urate concentrations and gout. Arthritis Research & Therapy, 17(1), 263. doi: 10.1186/s13075-015-0781-4

Gosling, A. L., Buckley, H. R., Matisoo-Smith, E., & Merriman, T. R. (2015). Pacific populations, metabolic disease and 'just-so stories': A critique of the 'Thrifty Genotype' hypothesis in Oceania. Annals of Human Genetics, 79(6), 470-480. doi: 10.1111/ahg.12132

Josephs, T. M., Hibbs, M. E., Ong, L., Morison, I. M., & Ledgerwood, E. C. (2015). Interspecies variation in the functional consequences of mutation of cytochrome c. PLoS ONE, 10(6), e0130292. doi: 10.1371/journal.pone.0130292

McKinney, C. (2015). Is resistance (n)ever futile? A response to "Futility in chronic anorexia nervosa: A concept whose time has not yet come" by Cynthia Geppert. American Journal of Bioethics, 15(7), 53-54. doi: 10.1080/15265161.2015.1042991

Robinson, P. C., & Merriman, T. R. (2015). Does midlife obesity really lower dementia risk? Lancet Diabetes & Endocrinology, 3(7), 501. doi: 10.1016/s2213-8587(15)00218-1

Kumaramanickavel, G., Denton, M. J., & Legge, M. (2015). No evidence for a genetic blueprint: The case of the "complex" mammalian photoreceptor [Brief communication]. Indian Journal of Ophthalmology, 63(4), 353-354. doi: 10.4103/0301-4738.158093

Edgar, R. J., Xu, X., Shirley, M., Konings, A. F., Martin, L. W., Ackerley, D. F., & Lamont, I. L. (2014). Interactions between an anti-sigma protein and two sigma factors that regulate the pyoverdine signaling pathway in Pseudomonas aeruginosa. BMC Microbiology, 14, 287. doi: 10.1186/s12866-014-0287-2

Alami, N. H., Smith, R. B., Carrasco, M. A., Williams, L. A., Winborn, C. S., Han, S. S. W., … Clare, A. J., … Taylor, J. P. (2014). Axonal transport of TDP-43 mRNA granules is impaired by ALS-causing mutations. Neuron, 81(3), 536-543. doi: 10.1016/j.neuron.2013.12.018

von Zychilinski, A., Williams, M., McCormick, S., & Kleffmann, T. (2014). Absolute quantification of apolipoproteins and associated proteins on human plasma lipoproteins. Journal of Proteomics, 106, 181-190. doi: 10.1016/j.jprot.2014.04.030

Najafpour, M. M., Isaloo, M. A., Eaton-Rye, J. J., Tomo, T., Nishihara, H., Satoh, K., … Allakhverdiev, S. I. (2014). Water exchange rate in manganese-based water-oxidizing catalysts in photosynthetic systems: From the water-oxidizing complex in photosystem II to nano-sized manganese oxides. Biochimica et Biophysica Acta: Bioenergetics, 1837(9), 1395-1410. doi: 10.1016/j.bbabio.2014.03.008

Tantirigama, M. L. S., Oswald, M. J., Duynstee, C., Hughes, S. M., & Empson, R. M. (2014). Expression of the developmental transcription factor Fezf2 identifies a distinct subpopulation of layer 5 intratelencephalic-projection neurons in mature mouse motor cortex. Journal of Neuroscience, 34(12), 4303-4308. doi: 10.1523/jneurosci.3111-13.2014

Nguyen, A. T., O'Neill, M. J., Watts, A. M., Robson, C. L., Lamont, I. L., Wilks, A., & Oglesby-Sherrouse, A. G. (2014). Adaptation of iron homeostasis pathways by a Pseudomonas aeruginosa pyoverdine mutant in the cystic fibrosis lung. Journal of Bacteriology, 196(12), 2265-2276. doi: 10.1128/JB.01491-14

Paten, A. M., Paine, S.-J., Peterson, S. W., Blair, H. T., Kenyon, P. R., Dearden, P. K., & Duncan, E. J. (2014). Identification of reference genes for RT-qPCR in ovine mammary tissue during late-pregnancy, lactation and in response to maternal nutritional programming. Physiological Genomics, 46, 560-570. doi: 10.1152/physiolgenomics.00030.2014

Mitchell, A. L., Macarthur, K. D. R., Gan, E. H., Baggott, L. E., Wolff, A. S. B., Skinningsrud, B., … Phipps-Green, A., Merriman, T. R., … Pearce, S. H. S. (2014). Association of autoimmune Addison's disease with alleles of STAT4 and GATA3 in European cohorts. PLoS ONE, 9(3), e88991. doi: 10.1371/journal.pone.0088991

Wilson, M. J., Kenny, N. J., & Dearden, P. K. (2014). Components of the dorsal-ventral pathway also contribute to anterior-posterior patterning in honeybee embryos (Apis mellifera). EvoDevo, 5, 11. doi: 10.1186/2041-9139-5-11

Patani, N., Dunbier, A. K., Anderson, H., Ghazoui, Z., Ribas, R., Anderson, E., … Dowsett, M. (2014). Differences in the transcriptional response to fulvestrant and estrogen deprivation in ER-positive breast cancer. Clinical Cancer Research, 20(15), 3962-3973. doi: 10.1158/1078-0432.ccr-13-1378

Chen, A., Beetham, H., Black, M. A., Priya, R., Telford, B. J., Guest, J., Wiggins, G. A. R., Godwin, T. D., … Guilford, P. J. (2014). E-cadherin loss alters cytoskeletal organization and adhesion in non-malignant breast cells but is insufficient to induce an epithelial-mesenchymal transition. BMC Cancer, 14, 552. doi: 10.1186/1471-2407-14-552

Rasheed, H., Hughes, K., Flynn, T. J., & Merriman, T. R. (2014). Mendelian randomization provides no evidence for a causal role of serum urate in increasing serum triglyceride levels. Circulation: Cardiovascular Genetics, 7, 830-837. doi: 10.1161/circgenetics.114.000556

Thorne, M. A. S., Kagoshima, H., Clark, M. S., Marshall, C. J., & Wharton, D. A. (2014). Molecular analysis of the cold tolerant Antarctic nematode, Panagrolaimus davidi. PLoS ONE, 9(8), e104526. doi: 10.1371/journal.pone.0104526

Davies, C. G., Fellner, M., Tchesnokov, E. P., Wilbanks, S. M., & Jameson, G. N. L. (2014). The Cys-Tyr crosslink of cysteine dioxygenase changes the optimal pH of the reaction without structural change. Biochemistry, 53(50), 7961-7968. doi: 10.1021/bi501277a

Chipman, A. D., Ferrier, D. E. K., Brena, C., Qu, J., Hughes, D. S. T., Schröder, R., … Dearden, P. K., … Duncan, E. J., … Richards, S. (2014). The first myriapod genome sequence reveals conservative arthropod gene content and genome organisation in the centipede Strigamia maritima. PLoS Biology, 12(11), e1002005. doi: 10.1371/journal.pbio.1002005

Jones, L. M., Legge, M., & Stoner, L. (2014). Case-controlled, cross-sectional evidence that spinal cord injury associated with sympathetic decentralisation may alter osteocalcin signalling. International Journal of Physical Medicine & Rehabilitation, 2, 224. doi: 10.4172/2329-9096.1000224

Dalbeth, N., House, M. E., Gamble, G. D., Pool, B., Horne, A., Purvis, L., … Merriman, M., Cadzow, M., Phipps-Green, A., & Merriman, T. R. (2014). Influence of the ABCG2 gout risk 141 K allele on urate metabolism during a fructose challenge. Arthritis Research & Therapy, 16, R34. doi: 10.1186/ar4463

Ribas, R., Ghazoui, Z., Gao, Q., Pancholi, S., Rani, A., Dunbier, A., … Martin, L.-A. (2014). Identification of chemokine receptors as potential modulators of endocrine resistance in oestrogen receptor–positive breast cancers. Breast Cancer Research, 16, 447. doi: 10.1186/s13058-014-0447-1

Kokaua, J., Sopoaga, F., Zaharic, T., & Van der Meer, J. (2014). The development of a pre-enrolment screening tool to inform targeted support services in the first year in health sciences. International Journal of the First Year in Higher Education, 5(1), 55-66. doi: 10.5204/intjfyhe.v5i1.205

Ha, M., Bekhit, A. E.-D., & Carne, A. (2014). Effects of L- and iso-ascorbic acid on meat protein hydrolyzing activity of four commercial plant and three microbial protease preparations. Food Chemistry, 149, 1-9. doi: 10.1016/j.foodchem.2013.10.082

Llamas, M. A., Imperi, F., Visca, P., & Lamont, I. L. (2014). Cell-surface signaling in Pseudomonas: Stress responses, iron transport and pathogenicity. FEMS Microbiology Reviews, 38, 569-597. doi: 10.1111/1574-6976.12078

Ferla, M. P., & Patrick, W. M. (2014). Bacterial methionine biosynthesis. Microbiology, 160, 1571-1584. doi: 10.1099/mic.0.077826-0

Stamp, L. K., Merriman, T. R., Barclay, M. L., Singh, J. A., Roberts, R. L., Wright, D. F. B., & Dalbeth, N. (2014). Impaired response or insufficient dosage? Examining the potential causes of ”inadequate response” to allopurinol in the treatment of gout. Seminars in Arthritis & Rheumatism, 44(2), 170-174. doi: 10.1016/j.semarthrit.2014.05.007

Teh, S.-S., Niven, B. E., Bekhit, A. E.-D. A., Carne, A., & Birch, E. J. (2014). The use of microwave and pulsed electric field as a pretreatment step in ultrasonic extraction of polyphenols from defatted hemp seed cake (Cannabis sativa) using response surface methodology. Food & Bioprocess Technology, 7(11), 3064-3076. doi: 10.1007/s11947-014-1313-y

Ng, M., Fleming, T., Robinson, M., Thomson, B., Graetz, N., Margono, C., … Merriman, T. R., … Gakidou, E. (2014). Global, regional, and national prevalence of overweight and obesity in children and adults during 1980-2013: A systematic analysis for the Global Burden of Disease Study 2013. Lancet, 384(9945), 766-781. doi: 10.1016/S0140-6736(14)60460-8

Davis, E., Scaletti-Hutchinson, E., Opel-Reading, H., Nakatani, Y., & Krause, K. L. (2014). The structure of alanine racemase from Acinetobacter baumannii. Acta Crystallographica Section F, 70(9), 1199-1205.

Macaulay, E. C., Roberts, H. E., Cheng, X., Jeffs, A. R., Baguley, B. C., & Morison, I. M. (2014). Retrotransposon hypomethylation in melanoma and expression of a placenta-specific gene. PLoS ONE, 9(4), e95840. doi: 10.1371/journal.pone.0095840

Biswas, A., & Brown, C. M. (2014). Scan for Motifs: A webserver for the analysis of post-transcriptional regulatory elements in the 3’ untranslated regions (3’ UTRs) of mRNAs. BMC Bioinformatics, 15, 174. doi: 10.1186/1471-2105-15-174

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Eccles, M. R., He, S., Ahn, A., Slobbe, L. J., Jeffs, A. R., Yoon, H.-S., & Baguley, B. C. (2013). MITF and PAX3 play distinct roles in melanoma cell migration: Outline of a “genetic switch” theory involving MITF and PAX3 in proliferative and invasive phenotypes of melanoma. Frontiers in Oncology, 3, 229. doi: 10.3389/fonc.2013.00229

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Imhoff, F. M., Yang, D., Mathew, S. F., Clarkson, A. N., Kawagishi, Y., Tate, W. P., Koishi, K., & McLennan, I. S. (2013). The type 2 anti-Müllerian hormone receptor has splice variants that are dominant-negative inhibitors. FEBS Letters, 587(12), 1749-1753. doi: 10.1016/j.febslet.2013.04.014

Teruel, M., McKinney, C., Balsa, A., Pascual-Salcedo, D., Rodriguez-Rodriguez, L., Ortiz, A. M., … Merriman, T., … Martin, J. (2013). Association of CD247 polymorphisms with rheumatoid arthritis: A replication study and a meta-analysis. PLoS ONE, 8(7), e68295. doi: 10.1371/journal.pone.0068295

Hyink, O., Laas, F., & Dearden, P. K. (2013). Genetic tests for alleles of complementary-sex-determiner to support honeybee breeding programmes. Apidologie, 44(3), 306-313. doi: 10.1007/s13592-012-0181-6

Smith, D. J., Lamont, I. L., Anderson, G. J., & Reid, D. W. (2013). Targeting iron uptake to control Pseudomonas aeruginosa infections in cystic fibrosis. European Respiratory Journal, 42(6), 1723-1736. doi: 10.1183/09031936.00124012

Cameron, R. C., Duncan, E. J., & Dearden, P. K. (2013). Biased gene expression in early honeybee larval development. BMC Genomics, 14, 903. doi: 10.1186/1471-2164-14-903

Eaton-Rye, J. J. (2013). Govindjee at 80: More than 50 years of free energy for photosynthesis. Photosynthesis Research, 116(2), 111-144. doi: 10.1007/s11120-013-9921-3

Gow, P., Stamp, L., Merriman, T., Stuart, R., Winnard, D., Lindsay, K., for the New Zealand Rheumatology Association, and the Māori Gout Action Group. (2013). New urate-lowering therapies in Aotearoa New Zealand: A response to Dr Lance Gravatt's letter on benzbromarone hepatotoxicity. New Zealand Medical Journal, 126(1382). Retrieved from http://www.nzma.org.nz/journal

Smith, D. J., Anderson, G. J., Lamont, I. L., Masel, P., Campbell, S. C., & Reid, D. W. (2013). Accurate assessment of systemic iron status in cystic fibrosis will avoid the hazards of inappropriate iron supplementation. Journal of Cystic Fibrosis, 12(3), 303-304. doi: 10.1016/j.jcf.2012.10.001

Fournier, P.-E., Gouriet, F., Gimenez, G., Robert, C., & Raoult, D. (2013). Deciphering genomic virulence traits of a Staphylococcus epidermidis strain causing native-valve endocarditis. Journal of Clinical Microbiology, 51(5), 1617-1621. doi: 10.1128/JCM.02820-12

Robinson, P. C., Taylor, W. J., & Merriman, T. R. (2013). Author reply. Internal Medicine Journal, 43(4), 466. doi: 10.1111/imj.12094

Gerth, M. L., Nigon, L. V., & Patrick, W. M. (2012). Characterization of the indole-3-glycerol phosphate synthase from Pseudomonas aeruginosa PAO1. Protein Journal, 31(5), 359-365. doi: 10.1007/s10930-012-9412-y

Hollis-Moffatt, J. E., Phipps-Green, A. J., Chapman, B., Jones, G. T., van Rij, A., Gow, P. J., Harrison, A. A., Highton, J., … Stamp, L. K., … Merriman, T. R. (2012). The renal urate transporter SLC17A1 locus: Confirmation of association with gout. Arthritis Research & Therapy, 14(2), R92. doi: 10.1186/ar3816

Jackson, S. A., Hinds, M. G., & Eaton-Rye, J. J. (2012). Solution structure of CyanoP from Synechocystis sp. PCC 6803: New insights on the structural basis for functional specialization amongst PsbP family proteins. Biochimica et Biophysica Acta: Bioenergetics, 1817(8), 1331-1338. doi: 10.1016/j.bbabio.2012.02.032

Lozano, R., Naghavi, M., Foreman, K., Lim, S., Shibuya, K., Aboyans, V., … Merriman, T. R., … Murray, C. J. L. (2012). Global and regional mortality from 235 causes of death for 20 age groups in 1990 and 2010: A systematic analysis for the Global Burden of Disease Study 2010. Lancet, 380(9859), 2095-2128. doi: 10.1016/S0140-6736(12)61728-0

Stamp, L. K., Hazlett, J., Roberts, R. L., Frampton, C., Highton, J., & Hessian, P. A. (2012). Adenosine receptor expression in rheumatoid synovium: A basis for methotrexate action. Arthritis Research & Therapy, 14, R138. doi: 10.1186/ar3871

O'Sullivan, P., Sharples, K., Dalphin, M., Davidson, P., Gilling, P., Cambridge, L., … Luxmanan, C., … Yoon, H.-S., … Guilford, P. J. (2012). A multigene urine test for the detection and stratification of bladder cancer in patients presenting with hematuria. Journal of Urology, 188(3), 741-747. doi: 10.1016/j.juro.2012.05.003

Wu, S. H., Black, M. A., North, R. A., & Rodrigo, A. G. (2012). A Bayesian model for classifying all differentially expressed proteins simultaneously in 2D PAGE gels. BMC Bioinformatics, 13, 137. doi: 10.1186/1471-2105-13-137

Evans, J. J., Chitcholtan, K., Dann, J. M., Guilford, P., Harris, G., Lewis, L. K., Nagase, J., … Sykes, P. H. (2012). Adrenomedullin interacts with VEGF in endometrial cancer and has varied modulation in tumours of different grades. Gynecologic Oncology, 125(1), 214-219. doi: 10.1016/j.ygyno.2011.12.429

Vella-Brincat, J. W. A., Begg, E. J., Jensen, B. P., Chin, P. K. L., Roberts, R. L., Fairhall, M., … Reid, K. (2012). The pharmacokinetics and pharmacogenetics of the antiemetic cyclizine in palliative care patients. Journal of Pain & Symptom Management, 43(3), 540-548. doi: 10.1016/j.jpainsymman.2011.04.022

Baratchi, S., Evans, J., Tate, W. P., Abraham, W. C., & Connor, B. (2012). Secreted amyloid precursor proteins promote proliferation and glial differentiation of adult hippocampal neural progenitor cells. Hippocampus, 22(7), 1517-1527. doi: 10.1002/hipo.20988

Vos, M. H., Bouzhir-Sima, L., Lambry, J.-C., Luo, H., Eaton-Rye, J. J., Ioanoviciu, A., … Liebl, U. (2012). Ultrafast ligand dynamics in the heme-based GAF sensor domains of the histidine kinases DosS and DosT from Mycobacterium tuberculosis. Biochemistry, 51(1), 159-166. doi: 10.1021/bi201467c

Hazlett, J., Stamp, L. K., Merriman, T., Highton, J., & Hessian, P. A. (2012). IL-23R rs11209026 polymorphism modulates IL-17A expression in patients with rheumatoid arthritis. Genes & Immunity, 13, 282-287. doi: 10.1038/gene.2011.80

Mann, K. M., Ward, J. M., Yew, C. C. K., Kovochich, A., Dawson, D. W., Black, M. A., … Copeland, N. G. (2012). Sleeping Beauty mutagenesis reveals cooperating mutations and pathways in pancreatic adenocarcinoma. PNAS, 109(16), 5934-5941. doi: 10.1073/pnas.1202490109

Wilson, M. J., & Dearden, P. K. (2012). Pair-rule gene orthologues have unexpected maternal roles in the honeybee (Apis mellifera). PLoS ONE, 7(9), e46490. doi: 10.1371/journal.pone.0046490

Lamb, J. J., Eaton-Rye, J. J., & Hohmann-Marriott, M. F. (2012). An LED-based fluorometer for chlorophyll quantification in the laboratory and in the field. Photosynthesis Research, 114(1), 59-68. doi: 10.1007/s11120-012-9777-y

Baker, E. S., Luckner, S. R., Krause, K. L., Lambden, P. R., Clarke, I. N., & Ward, V. K. (2012). Inherent structural disorder and dimerisation of murine norovirus NS1-2 protein. PLoS ONE, 7(2), e30534. doi: 10.1371/journal.pone.0030534

Guiguemde, W. A., Shelat, A. A., Garcia-Bustos, J. F., Diagana, T. T., Gamo, F.-J., & Guy, R. K. (2012). Global phenotypic screening for antimalarials [Review article]. Chemistry & Biology, 19(1), 116-129. doi: 10.1016/j.chembiol.2012.01.004

Ha, M., Bekhit, A. E.-D. A., Carne, A., & Hopkins, D. L. (2012). Characterisation of commercial papain, bromelain, actinidin and zingibain protease preparations and their activities toward meat proteins. Food Chemistry, 134(1), 95-105. doi: 10.1016/j.foodchem.2012.02.071

Van de Putte, A. P., Janko, K., Kasparova, E., Maes, G. E., Rock, J., Koubbi, P., … Marshall, C. (2012). Comparative phylogeography of three trematomid fishes reveals contrasting genetic structure patterns in benthic and pelagic species. Marine Genomics, 8, 23-34. doi: 10.1016/j.margen.2012.05.002

Weller, J. L., Chee Liew, L., Hecht, V. F. G., Rajandran, V., Laurie, R. E., Ridge, S., … Macknight, R. C., & Lejeune-Hénaut, I. (2012). A conserved molecular basis for photoperiod adaptation in two temperate legumes. PNAS, 109(51), 21158-21163. doi: 10.1073/pnas.1207943110

Murray, C. J. L., Vos, T., Lozano, R., Naghavi, M., Flaxman, A. D., Michaud, C., … Derrett, S., … Grainger, R., … Merriman, T. R., … Taylor, W. J., … Thomson, W. M., … Lopez, A. D. (2012-2013). Disability-adjusted life years (DALYs) for 291 diseases and injuries in 21 regions, 1990-2010: A systematic analysis for the Global Burden of Disease Study 2010. Lancet, 380(9859), 2197-2223. doi: 10.1016/S0140-6736(12)61689-4

Knapp, K. M., Zebisch, M., & Sträter, N. (2012). Crystallization and preliminary X-ray analysis of the open form of human ecto-5′-nucleotidase (CD73). Acta Crystallographica Section F, 68(12), 1545-1549. doi: 10.1107/s1744309112045447

Lee, Y. F., Miller, L. D., Chan, X. B., Black, M. A., Pang, B., Ong, C. W., … Desai, K. V. (2012). JMJD6 is a driver of cellular proliferation and motility and a marker of poor prognosis in breast cancer. Breast Cancer Research, 14(3), R85. doi: 10.1186/bcr3200

Jarvis, R. M., Hughes, S. M., & Ledgerwood, E. C. (2012). Peroxiredoxin 1 functions as a signal peroxidase to receive, transduce, and transmit peroxide signals in mammalian cells. Free Radical Biology & Medicine, 53(7), 1522-1530. doi: 10.1016/j.freeradbiomed.2012.08.001

Bernhardt, H. S., & Tate, W. P. (2012). Primordial soup or vinaigrette: Did the RNA world evolve at acidic pH? Biology Direct, 7(4). doi: 10.1186/1745-6150-7-4

Debono, R., Topless, R., Markie, D., Black, M. A., & Merriman, T. R. (2012). Analysis of the DISC1 translocation partner (11q14.3) in genetic risk of schizophrenia. Genes, Brain & Behavior, 11(7), 859-963. doi: 10.1111/j.1601-183X.2012.00832.x

Budhidarmo, R., Nakatani, Y., & Day, C. L. (2012). RINGs hold the key to ubiquitin transfer. Trends in Biochemical Sciences, 37(2), 58-65. doi: 10.1016/j.tibs.2011.11.001

Tchesnokov, E. P., Wilbanks, S. M., & Jameson, G. N. L. (2012). A strongly bound high-spin iron(II) coordinates cysteine and homocysteine in cysteine dioxygenase. Biochemistry, 51(1), 527-564. doi: 10.1021/bi201597w

Hawes, T. C., Marshall, C. J., & Wharton, D. A. (2012). Ultraviolet radiation tolerance of the Antarctic springtail, Gomphiocephalus hodgsoni. Antarctic Science, 24(2), 147-153. doi: 10.1017/S0954102011000812

Pemberton, C. J., Siriwardena, M., Kleffmann, T., Ruygrok, P., Palmer, S. C., Yandle, T. G., & Richards, A. M. (2012). First identification of circulating Prepro-A-Type natriuretic peptide (PreproANP) signal peptide fragments in humans: Initial assessment as cardiovascular biomarkers. Clinical Chemistry, 58(4), 757-767. doi: 10.1373/clinchem.2011.176990

Chua, J. P. S., Wallace, E. J. S., Yardley, J. A., Duncan, E. J., Dearden, P. K., & Summerfield, T. C. (2012). Gene expression indicates a zone of heterocyst differentiation within the thallus of the cyanolichen Pseudocyphellaria crocata. New Phytologist, 196(3), 862-872. doi: 10.1111/j.1469-8137.2012.04272.x

Pilbrow, A. P., Folkersen, L., Pearson, J. F., Brown, C. M., McNoe, L., Wang, N. M., … Black, M. A., Troughton, R. W., Richards, A. M., … Cameron, V. A. (2012). The chromosome 9p21.3 coronary heart disease risk allele is associated with altered gene expression in normal heart and vascular tissues. PLoS ONE, 7(6), e39574. doi: 10.1371/journal.pone.0039574

Legge, M., & Byers, M. S. (2012). Varying amounts of different aldehydes present in the cryoprotectants dimethyl sulphoxide and 1,2-propanediol. Cryobiology, 64(3), 297-300. doi: 10.1016/j.cryobiol.2012.02.013

Robinson, P. C., Taylor, W. J., & Merriman, T. R. (2012). A systematic review of the prevalence of gout and hyperuricemia in Australia. Internal Medicine Journal, 42(9), 997-1007. doi: 10.1111/j.1445-5994.2012.02794.x

Stephenson, W. J., Kirk, R. M., Kennedy, D. M., Finlayson, B. L., & Chen, Z. (2012). Long term shore platform surface lowering rates: Revisiting Gill and Lang after 32 years. Marine Geology, 299–302, 90-95. doi: 10.1016/j.margeo.2012.01.005

Tyndall, J. D. A., Lue, H., Rutledge, M. T., Bernhagen, J., Hampton, M. B., & Wilbanks, S. M. (2012). Macrophage migration inhibitory factor covalently complexed with phenethyl isothiocyanate. Acta Crystallographica Section F, 68(9), 999-1002. doi: 10.1107/s1744309112030552

Chatterjee, A., Rodger, E. J., Stockwell, P. A., Weeks, R. J., & Morison, I. M. (2012). Technical considerations for reduced representation bisulfite sequencing with multiplexed libraries. Journal of Biomedicine & Biotechnology, 2012, 741542. doi: 10.1155/2012/741542

Middleton, A. J., Marshall, C. B., Faucher, F., Bar-Dolev, M., Braslavsky, I., Campbell, R. L., … Davies, P. L. (2012). Antifreeze protein from freeze-tolerant grass has a beta-roll fold with an irregularly structured ice-binding site. Journal of Molecular Biology, 416, 713-724. doi: 10.1016/j.jmb.2012.01.032

Weigel, M. T., Ghazoui, Z., Dunbier, A. K., Pancholi, S., Dowsett, M., & Martin, L.-A. (2012). Preclinical and clinical studies of estrogen deprivation support the PDGF/Abl pathway as a novel therapeutic target for overcoming endocrine resistance in breast cancer. Breast Cancer Research, 14(3), R78. doi: 10.1186/bcr3191

Kardys, I., Oemrawsingh, R. M., Kay, P., Jones, G. T., McCormick, S. P. A., Daemen, J., … Serruys, P. (2012). Lipoprotein(a), interleukin-10, C-reactive protein, and 8-year outcome after percutaneous coronary intervention. Clinical Cardiology, 35(8), 482-489. doi: 10.1002/clc.21988

Najafpour, M. M., Moghaddam, A. N., Yang, Y. N., Aro, E.-M., Carpentier, R., Eaton-Rye, J. J., … Allakhverdiev, S. I. (2012). Biological water-oxidizing complex: A nano-sized manganese-calcium oxide in a protein environment. Photosynthesis Research, 114(1), 1-13. doi: 10.1007/s11120-012-9778-x

Chen, X. S., & Brown, C. M. (2012). Computational identification of new structured cis-regulatory elements in the 3’-untranslated region of human protein coding genes. Nucleic Acids Research, 40(18), 8862-8873. doi: 10.1093/nar/gks684

Baldwin, S., Revanna, R., Thomson, S., Pither-Joyce, M., Wright, K., Crowhurst, R., … Macknight, R., & McCallum, J. A. (2012). A toolkit for bulk PCR-based marker design from next-generation sequence data: Application for development of a framework linkage map in bulb onion (Allium cepa L.). BMC Genomics, 13, 637. doi: 10.1186/1471-2164-13-637

Bricker, T. M., Roose, J. L., Fagerlund, R. D., Frankel, L. K., & Eaton-Rye, J. J. (2012). The extrinsic proteins of Photosystem II. Biochimica et Biophysica Acta: Bioenergetics, 1817(1), 121-142. doi: 10.1016/j.bbabio.2011.07.006

Scaletti, E. R., Luckner, S. R., & Krause, K. L. (2012). Structural features and kinetic characterization of alanine racemase from Staphylococcus aureus (Mu50). Acta Crystallographica Section D, 68, 82-92. doi: 10.1107/S0907444911050682

Eglinton, T. W., Roberts, R., Pearson, J., Barclay, M., Merriman, T. R., Frizelle, F. A., & Gearry, R. B. (2012). Clinical and genetic risk factors for perianal Crohn's disease in a population-based cohort. American Journal of Gastroenterology, 107, 589-596. doi: 10.1038/ajg.2011.437

Bernhardt, H. S. (2012). The RNA world hypothesis: The worst theory of the early evolution of life (except for all the others). Biology Direct, 7, 23. doi: 10.1186/1745-6150-7-23

Bokor, A. A. M., Kohn, L. M., Poulter, R. T. M., & van Kan, J. A. L. (2012). PRP8 inteins in species of the genus Botrytis and other ascomycetes. Fungal Genetics & Biology, 49(3), 250-261. doi: 10.1016/j.fgb.2012.01.001

McKinney, C., & Merriman, T. R. (2012). Meta-analysis confirms a role for deletion in FCGR3B in autoimmune phenotypes. Human Molecular Genetics, 21(10), 2370-2376. doi: 10.1093/hmg/dds039

Knapp, K., Zebisch, M., Pippel, J., El-Tayeb, A., Müller, C. E., & Sträter, N. (2012). Crystal structure of the human ecto-5′-nucleotidase (CD73): Insights into the regulation of purinergic signaling. Structure, 20(12), 2161-2173. doi: 10.1016/j.str.2012.10.001

Lim, S. S., Vos, T., Flaxman, A. D., Danaei, G., Shibuya, K., Adair-Rohani, H., … Grainger, R., … Merriman, T. R., … Ezzati, M. (2012). A comparative risk assessment of burden of disease and injury attributable to 67 risk factors and risk factor clusters in 21 regions, 1990-2010: A systematic analysis for the Global Burden of Disease Study 2010. Lancet, 380(9859), 2224-2260. doi: 10.1016/S0140-6736(12)61766-8

Marsman, J., & Horsfield, J. A. (2012). Long distance relationships: Enhancer-promoter communication and dynamic gene transcription. Biochimica et Biophysica Acta: Gene Regulatory Mechanisms, 1819(11-12), 1217-1227. doi: 10.1016/j.bbagrm.2012.10.008

Lange, S. J., Maticzka, D., Möhl, M., Gagnon, J. N., Brown, C. M., & Backofen, R. (2012). Global or local? Predicting secondary structure and accessibility in mRNAs. Nucleic Acids Research, 40(12), 5215-5226. doi: 10.1093/nar/gks181

Garama, D., Bremer, P., & Carne, A. (2012). Extraction and analysis of carotenoids from the New Zealand sea urchin Evechinus chloroticus gonads. Acta Biochimica Polonica, 59(1), 83-85.

Jensen, B. P., Chin, P. K. L., Roberts, R. L., & Begg, E. J. (2012). Influence of adult age on the total and free clearance and protein binding of (R)- and (S)-warfarin. British Journal of Clinical Pharmacology, 74(5), 797-805. doi: 10.1111/j.1365-2125.2012.04259.x

Chen-Xu, M., Topless, R., McKinney, C., Merriman, M. E., Phipps-Green, A., Dalbeth, N., … Harrison, A. A., Highton, J., … van Rij, A., Jones, G. T., … Stamp, L. K., … Merriman, T. R. (2012). Replication of association of the interleukin 23 receptor rs1343151 variant with rheumatoid arthritis in Caucasian sample sets. Annals of the Rheumatic Diseases, 71(1), 155-157. doi: 10.1136/annrheumdis-2011-200591

Roberts, R. L., Gallo, L.-M. D., Barclay, M. L., Gómez-García, M., Cardeña, C., Merriman, T. R., Gearry, R. B., & Martin, J. (2012). Independent replication of an association of CNVR7113.6 with Crohn's disease in caucasians. Inflammatory Bowel Diseases, 18(2), 305-311. doi: 10.1002/ibd.21752

Lasham, A., Samuel, W., Cao, H., Patel, R., Mehta, R., Stern, J. L., … Woolley, A. G., … Black, M. A., Shelling, A. N., Print, C. G., & Braithwaite, A. W. (2012). YB-1, the E2F Pathway, and regulation of tumor cell growth. Journal of the National Cancer Institute, 104(2), 133-146. doi: 10.1093/jnci/djr512

Evans, G. E., Martínez-Conejero, J. A., Phillipson, G. T. M., Simón, C., McNoe, L. A., Sykes, P. H., … Evans, J. J. (2012). Gene and protein expression signature of endometrial glandular and stromal compartments during the window of implantation. Fertility & Sterility, 97(6), 1365-1373. doi: 10.1016/j.fertnstert.2012.03.007

Chatterjee, A., Stockwell, P. A., Rodger, E. J., & Morison, I. M. (2012). Comparison of alignment software for genome-wide bisulphite sequence data. Nucleic Acids Research, 40(10), e79. doi: 10.1093/nar/gks150

McKinney, C., Broen, J. C. A., Vonk, M. C., Beretta, L., Hesselstrand, R., Hunzelmann, N., … Merriman, T. R. (2012). Evidence that deletion at FCGR3B is a risk factor for systemic sclerosis. Genes & Immunity, 13(6), 458-460. doi: 10.1038/gene.2012.15

Wilsher, M., Voight, L., Milne, D., Teh, M., Good, N., Kolbe, J., … Merriman, T., … Dalbeth, N. (2012). Prevalence of airway and parenchymal abnormalities in newly diagnosed rheumatoid arthritis. Respiratory Medicine, 106(10), 1441-1446. doi: 10.1016/j.rmed.2012.06.020

Ryan, M. M., Ryan, B., Kyrke-Smith, M., Logan, B., Tate, W. P., Abraham, W. C., & Williams, J. M. (2012). Temporal profiling of gene networks associated with the late phase of long-term potentiation in vivo. PLoS ONE, 7(7), e40538. doi: 10.1371/journal.pone.0040538

Rodger, E. J., Suetani, R. J., Jones, G. T., Kleffmann, T., Carne, A., Legge, M., & McCormick, S. P. A. (2012). Proteomic analysis of aortae from human lipoprotein(a) transgenic mice shows an early metabolic response independent of atherosclerosis. PLoS ONE, 7(1), e30383. doi: 10.1371/journal.pone.0030383

Wu, R.-M., Walton, E. F., Richardson, A. C., Wood, M., Hellens, R. P., & Varkonyi-Gasic, E. (2012). Conservation and divergence of four kiwifruit SVP-like MADS-box genes suggest distinct roles in kiwifruit bud dormancy and flowering. Journal of Experimental Botany, 63(2), 797-807. doi: 10.1093/jxb/err304

Bentley, R. W., Keown, D. A., Gearry, R. B., Cameron, V. A., Keenan, J., Roberts, R. L., & Day, A. S. (2012). Vitamin D receptor polymorphisms in colorectal cancer in New Zealand: An association study. New Zealand Medical Journal, 125(1356). Retrieved from http://www.nzma.org.nz/journal

Ineson, J., Stayner, C., Hazlett, J., Slobbe, L., Robson, E., Legge, M., & Eccles, M. R. (2012). Somatic reactivation of expression of the silent maternal Mest allele and acquisition of normal reproductive behaviour in a colony of Peg1/Mest mutant mice. Journal of Reproduction & Development, 58(4), 490-500.

Chen, A., & Brown, C. (2012). Distinct families of cis-acting RNA replication epsilon elements from hepatitis B viruses. RNA Biology, 9(2), 130-136. doi: 10.4161/rna.18649

Caldon, C. E., Sergio, C. M., Kang, J., Muthukaruppan, A., Boersma, M. N., Stone, A., … Black, M. A., … Musgrove, E. A. (2012). Cyclin E2 overexpression is associated with endocrine resistance but not insensitivity to CDK2 inhibition in human breast cancer cells. Molecular Cancer Therapeutics, 11(7), 1488-1499. doi: 10.1158/1535-7163.mct-11-0963

Gerth, M. L., Ferla, M. P., & Rainey, P. B. (2012). The origin and ecological significance of multiple branches for histidine utilization in Pseudomonas aeruginosa PAO1. Environmental Microbiology, 14(8), 1929-1940. doi: 10.1111/j.1462-2920.2011.02691.x

Oliver, V. F., Miles, H. L., Cutfield, W. S., Hofman, P. L., Ludgate, J. L., & Morison, I. M. (2012). Defects in imprinting and genome-wide DNA methylation are not common in the in vitro fertilization population. Fertility & Sterility, 97(1), 147-153.e7. doi: 10.1016/j.fertnstert.2011.10.027

Jensen, B. P., Roberts, R. L., Vyas, R., Bonke, G., Jardine, D. L., & Begg, E. J. (2012). Influence of ABCB1 (P-glycoprotein) haplotypes on nortriptyline pharmacokinetics and nortriptyline-induced postural hypotension in healthy volunteers. British Journal of Clinical Pharmacology, 73(4), 619-628. doi: 10.1111/j.1365-2125.2011.04126.x

Nakatani, Y., Cutfield, S. M., Cowieson, N. P., & Cutfield, J. F. (2012). Structure and activity of exo-1,3/1,4-β-glucanase from marine bacterium Pseudoalteromonas sp. BB1 showing a novel C-terminal domain. FEBS Journal, 279(3), 464-478. doi: 10.1111/j.1742-4658.2011.08439.x

Pilbrow, J., Garama, D., & Carne, A. (2012). Carotenoid-binding proteins: Accessories to carotenoid function. Acta Biochimica Polonica, 59(1), 163-165.

Fagerlund, R. D., Ooi, P. L., & Wilbanks, S. M. (2012). Soluble expression and purification of tumor suppressor WT1 and its zinc finger domain. Protein Expression & Purification, 85(2), 165-172. doi: 10.1016/j.pep.2012.08.002

Zondag, L., Dearden, P. K., & Wilson, M. J. (2012). Deep sequencing and expression of microRNAs from early honeybee (Apis mellifera) embryos reveals a role in regulating early embryonic patterning. BMC Evolutionary Biology, 12, 211. doi: 10.1186/1471-2148-12-211

Vos, T., Flaxman, A. D., Naghavi, M., Lozano, R., Michaud, C., Ezzati, M., … Derrett, S., … Grainger, R., … Merriman, T. R., … Taylor, W. J., … Thomson, W. M., … Murray, C. J. L. (2012). Years lived with disability (YLDs) for 1160 sequelae of 289 diseases and injuries 1990-2010: A systematic analysis for the Global Burden of Disease Study 2010. Lancet, 380(9859), 2163-2196. doi: 10.1016/S0140-6736(12)61729-2

Huang, R. Y.-J., Guilford, P., & Thiery, J. P. (2012). Early events in cell adhesion and polarity during epithelial-mesenchymal transition. Journal of Cell Science, 125(19), 4417-4422. doi: 10.1242/jcs.099697

Shevela, D., Eaton-Rye, J. J., Shen, J.-R., & Govindjee (2012). Photosystem II and the unique role of bicarbonate: A historical perspective. Biochimica et Biophysica Acta: Bioenergetics, 1817(8), 1134-1151. doi: 10.1016/j.bbabio.2012.04.003

MacKenzie, L. A., Selwood, A. I., & Marshall, C. (2012). Isolation and characterization of an enzyme from the Greenshell™ mussel Perna canaliculus that hydrolyses pectenotoxins and esters of okadaic acid. Toxicon, 60(3), 406-419. doi: 10.1016/j.toxicon.2012.05.005

Hsu, A., Dalbeth, N., Gow, P., Harrison, A., Highton, J., Jones, P. B., Stamp, L. K., & Merriman, T. R. (2012). No evidence for association of Chr 9p21 variant rs1333049 with gout in New Zealand case-control sample sets. Rheumatology, 51, 1129-1130. doi: 10.1093/rheumatology/kes029

Stamp, L. K., & Roberts, R. L. (2011). Effect of genetic polymorphisms in the folate pathway on methotrexate therapy in rheumatic diseases. Pharmacogenomics, 12(10), 1449-1463. doi: 10.2217/pgs.11.86

Dickerhof, N., Kleffmann, T., Jack, R., & McCormick, S. (2011). Bacitracin inhibits the reductive activity of protein disulfide isomerase by disulfide bond formation with free cysteines in the substrate-binding domain. FEBS Journal, 278(12), 2034-2043. doi: 10.1111/j.1742-4658.2011.08119.x

Ryan, M. M., Mason-Parker, S. E., Tate, W. P., Abraham, W. C., & Williams, J. M. (2011). Rapidly induced gene networks following induction of long-term potentiation at perforant path synapses in vivo. Hippocampus, 21(5), 541-553. doi: 10.1002/hipo.20770

Merriman, T. R., & Dalbeth, N. (2011). Genetic and environmental risk factors in hyperuricaemia and common gout. Current Rheumatology Reviews, 7(2), 114-122. doi: 10.2174/157339711795305013

Baldwin, S. J., Dodds, K. G., Auvray, B., Genet, R. A., Macknight, R. C., & Jacobs, J. M. E. (2011). Association mapping of cold-induced sweetening in potato using historical phenotypic data. Annals of Applied Biology, 158(3), 248-256. doi: 10.1111/j.1744-7348.2011.00459.x

Dunbier, A. K., Anderson, H., Ghazoui, Z., Salter, J., Parker, J. S., Perou, C. M., … Dowsett, M. (2011). Association between breast cancer subtypes and response to neoadjuvant anastrozole. Steroids, 76(8), 736-740. doi: 10.1016/j.steroids.2011.02.025

Borg, M., Brownfield, L., Khatab, H., Sidorova, A., Lingaya, M., & Twell, D. (2011). The R2R3 MYB transcription factor DUO1 activates a male germline-specific regulon essential for sperm cell differentiation in Arabidopsis. Plant Cell, 23(2), 534-549. doi: 10.1105/tpc.110.081059

Nagai, S., Felipe Alves, C. A., Kobayashi, M., & Ikeda, M. (2011). Comparative transient expression assay analysis of hycu-hr6- and IE1-dependent regulation of baculovirus gp64 early promoters in three insect cell lines. Virus Research, 155(1), 83-90. doi: 10.1016/j.virusres.2010.08.025

Anthony, K. G., Strych, U., Yeung, K. R., Shoen, C. S., Perez, O., Krause, K. L., … Koski, R. A. (2011). New classes of alanine racemase inhibitors identified by high-throughput screening show antimicrobial activity against Mycobacterium tuberculosis. PLoS ONE, 6(5), e20374. doi: 10.1371/journal.pone.0020374

Cochemé, H. M., Quin, C., McQuaker, S. J., Cabreiro, F., Logan, A., Prime, T. A., … Porteous, C. M., Smith, R. A. J., … Murphy, M. P. (2011). Measurement of H₂O₂ within living drosophila during aging using a ratiometric mass spectrometry probe targeted to the mitochondrial matrix. Cell Metabolism, 13(3), 340-350. doi: 10.1016/j.cmet.2011.02.003

Nair, A. (2011). Decision making mechanism influences the regulatory function of Notch in apoptosis. Journal of Cell & Molecular Biology, 9(1), 1-4.

Martin, L.-A., Ghazoui, Z., Weigel, M. T., Pancholi, S., Dunbier, A., Johnston, S., & Dowsett, M. (2011). An in vitro model showing adaptation to long-term oestrogen deprivation highlights the clinical potential for targeting kinase pathways in combination with aromatase inhibition. Steroids, 76, 772-776. doi: 10.1016/j.steroids.2011.02.035

Wilson, M. J., Abbott, H., & Dearden, P. K. (2011). The evolution of oocyte patterning in insects: Multiple cell-signaling pathways are active during honeybee oogenesis and are likely to play a role in axis patterning. Evolution & Development, 13(2), 127-137. doi: 10.1111/j.1525-142X.2011.00463.x

Upritchard, H. G., Yang, J., Bremer, P. J., Lamont, I. L., & McQuillan, A. J. (2011). Adsorption of enterobactin to metal oxides and the role of siderophores in bacterial adhesion to metals. Langmuir, 27(17), 10587-10596. doi: 10.1021/la202352j

Lønning, P. E., Haynes, B. P., Straume, A. H., Dunbier, A., Helle, H., Knappskog, S., & Dowsett, M. (2011). Exploring breast cancer estrogen disposition: The basis for endocrine manipulation. Clinical Cancer Research, 17(15), 4948-4958. doi: 10.1158/1078-0432.ccr-11-0043

Laurie, R. E., Diwadkar, P., Jaudal, M., Zhang, L., Hecht, V., Wen, J., … Macknight, R. C. (2011). The Medicago FLOWERING LOCUS T homolog, MtFTa1, is a key regulator of flowering time. Plant Physiology, 156(4), 2207-2224. doi: 10.1104/pp.111.180182

Hook, S. M., Phipps-Green, A. J., Faiz, F., McNoe, L., McKinney, C., Hollis-Moffatt, J. E., & Merriman, T. R. (2011). Smad2: A candidate gene for the murine autoimmune diabetes locus Idd21.1. Journal of Clinical Endocrinology & Metabolism, 96(12), E2072-E2077. doi: 10.1210/jc.2011-0463

Linterman, K. S., Palmer, D. N., Kay, G. W., Barry, L. A., Mitchell, N. L., McFarlane, R. G., Black, M. A., … Hughes, S. M. (2011). Lentiviral-mediated gene transfer to the sheep brain: Implications for gene therapy in Batten disease. Human Gene Therapy, 22(8), 1011-1020. doi: 10.1089/hum.2011.026

Stevens, S. G., Gardner, P. P., & Brown, C. (2011). Two covariance models for iron-responsive elements. RNA Biology, 8(5), 792-801. doi: 10.4161/rna.8.5.16037

Yeoh, C. C., Balcerowicz, M., Laurie, R., Macknight, R., & Putterill, J. (2011). Developing a method for customized induction of flowering. BMC Biotechnology, 11, 36. doi: 10.1186/1472-6750-11-36

Rodríguez-Rodríguez, L., Wan Taib, W. R., Topless, R., Steer, S., González-Escribano, M. F., Balsa, A., … Merriman, T. R., & Martin, J. (2011). The PTPN22 R263Q polymorphism is a risk factor for rheumatoid arthritis in Caucasian case-control samples. Arthritis & Rheumatism, 63(2), 365-372. doi: 10.1002/art.30145

Smith, R. A., & Murphy, M. P. (2011). Mitochondria-targeted antioxidants as therapies. Discovery Medicine, 11(57), 106-114.

Nagarajan, A., Winter, R., Eaton-Rye, J., & Burnap, R. (2011). A synthetic DNA and fusion PCR approach to the ectopic expression of high levels of the D1 protein of photosystem II in Synechocystis sp. PCC 6803. Journal of Photochemistry & Photobiology B, 104(1-2), 212-219. doi: 10.1016/j.jphotobiol.2011.02.009

Janko, K., Marshall, C., Musilová, Z., Van Houdt, J., Couloux, A., Cruaud, C., & Lecointre, G. (2011). Multilocus analyses of an Antarctic fish species flock (Teleostei, Notothenioidei, Trematominae): Phylogenetic approach and test of the early-radiation event. Molecular Phylogenetics & Evolution, 60(3), 305-316. doi: 10.1016/j.ympev.2011.03.008

Chand, A., & Legge, M. (2011). Stereological assessment of developing mouse ovarian follicles in an in vitro culture system. Anatomical Record, 294(3), 379-383. doi: 10.1002/ar.21328

Chen, X. S., Penny, D., & Collins, L. J. (2011). Characterization of RNase MRP RNA and novel snoRNAs from Giardia intestinalis and Trichomonas vaginalis. BMC Genomics, 12, 550. doi: 10.1186/1471-2164-12-550

Dunbier, A. K., Anderson, H., Ghazoui, Z., Lopez-Knowles, E., Pancholi, S., Ribas, R., … Dowsett, M. (2011). ESR1 is co-expressed with closely adjacent uncharacterised genes spanning a breast cancer susceptibility locus at 6q25.1. PLoS Genetics, 7(4), e1001382. doi: 10.1371/journal.pgen.1001382

Miller, T. W., Balko, J. M., Fox, E. M., Ghazoui, Z., Dunbier, A., Anderson, H., … Arteaga, C. L. (2011). ERα-dependent E2F transcription can mediate resistance to estrogen deprivation in human breast cancer. Cancer Discovery, 1, 338-351. doi: 10.1158/2159-8290.CD-11-0101

Hollis-Moffatt, J. E., Gow, P. J., Harrison, A. A., Highton, J., Jones, P. B. B., Stamp, L. K., … Merriman, T. R. (2011). The SLC2A9 nonsynonymous Arg265His variant and gout: Evidence for a population-specific effect on severity. Arthritis Research & Therapy, 13(3), R85. doi: 10.1186/ar3356

Fagerlund, R. D., & Eaton-Rye, J. J. (2011). The lipoproteins of cyanobacterial photosystem II. Journal of Photochemistry & Photobiology B, 104(1-2), 191-203. doi: 10.1016/j.jphotobiol.2011.01.022

Martin, L. W., Reid, D. W., Sharples, K. J., & Lamont, I. L. (2011). Pseudomonas siderophores in the sputum of patients with cystic fibrosis. Biometals, 24(6), 1059-1067. doi: 10.1007/s10534-011-9464-z

Hecht, V., Laurie, R. E., Vander Schoor, J. K., Ridge, S., Knowles, C. L., Chee Liew, L., … Macknight, R. C., & Weller, J. L. (2011). The pea GIGAS gene is a FLOWERING LOCUS T homolog necessary for graft-transmissible specification of flowering but not for responsiveness to photoperiod. Plant Cell, 23(1), 147-161. doi: 10.1105/tpc.110.081042

Chand, A. L., & Legge, M. (2011). Amino acid transport system L activity in developing mouse ovarian follicles. Human Reproduction, 26(11), 3102-3108. doi: 10.1093/humrep/der298

Wilson, M. J., & Dearden, P. K. (2011). Diversity in insect axis formation: Two orthodenticle genes and hunchback act in anterior patterning and influence dorsoventral organization in the honeybee (Apis mellifera). Development, 138(16), 3497-3507. doi: 10.1242/dev.067926

Sowerby, S. J., Mirams, G. J., Hill, P. C., & Paulin, M. G. (2011). An axisymmetric meniscus converges particles for microscopy. Journal of Microscopy, 244(3), 230-234. doi: 10.1111/j.1365-2818.2011.03527.x

Ghazoui, Z., Buffa, F. M., Dunbier, A. K., Anderson, H., Dexter, T., Detre, S., … Dowsett, M. (2011). Close and stable relationship between proliferation and a hypoxia metagene in aromatase inhibitor-treated ER-positive breast cancer. Clinical Cancer Research, 17(9), 3005-3012. doi: 10.1158/1078-0432.ccr-10-1704

Miller, T. W., Balko, J. M., Ghazoui, Z., Dunbier, A., Anderson, H., Dowsett, M., … Arteaga, C. L. (2011). A gene expression signature from human breast cancer cells with acquired hormone independence identifies MYC as a mediator of antiestrogen resistance. Clinical Cancer Research, 17(7), 2024-2034. doi: 10.1158/1078-0432.ccr-10-2567

Bird, S. D., Legge, M., & Walker, R. J. (2011). Thiols stabilize cobblestone morphology of cultured mesothelial cells. Cell Biology International, 35(8), 857-867. doi: 10.1042/CBI20100593

Kafka, A. P., Kleffmann, T., Rades, T., & McDowell, A. (2011). The application of MALDI TOF MS in biopharmaceutical research. International Journal of Pharmaceutics, 417(1-2), 70-82. doi: 10.1016/j.ijpharm.2010.12.010

Legge, M., Jones, L. M., & McLeod, B. J. (2011). Energy substrate utilization in the common brushtailed possum (Trichosurus vulpecula) using intravenous tolerance tests. Comparative Biochemistry & Physiology Part B, 158(2), 132-135. doi: 10.1016/j.cbpb.2010.10.007

Wong, C. K., Young, V. L., Kleffmann, T., & Ward, V. K. (2011). Genomic and proteomic analysis of invertebrate iridovirus type 9. Journal of Virology, 85(15), 7900-7911. doi: 10.1128/jvi.00645-11

Nixon, G., Blattner, K., Dawson, J., Dovey, S., Black, M. A., Wilkins, G., Dunn, A. C., & McLellan, A. D. (2011). Streptokinase antibodies in patients presenting with acute coronary syndrome in three rural New Zealand populations. Journal of Clinical Pathology, 64, 426-429. doi: 10.1136/jcp.2010.085837

Merriman, T. R., & Dalbeth, N. (2011). The genetic basis of hyperuricaemia and gout. Joint Bone Spine, 78(1), 35-40. doi: 10.1016/j.jbspin.2010.02.027

Anderson, C. A., Boucher, G., Lees, C. W., Franke, A., D’Amato, M., Taylor, K. D., … Barclay, M., … Roberts, R., … Gearry, R., … Rioux, J. D. (2011). Meta-analysis identifies 29 additional ulcerative colitis risk loci, increasing the number of confirmed associations to 47. Nature Genetics, 43(3), 246-254. doi: 10.1038/ng.764

Feltham, R., Bettjeman, B., Budhidarmo, R., Mace, P. D., Shirley, S., Condon, S. M., … Day, C. L. (2011). Smac mimetics activate the E3 ligase activity of cIAP1 protein by promoting RING domain dimerization. Journal of Biological Chemistry, 286(19), 17015-17028. doi: 10.1074/jbc.M111.222919

McCowan, L. M. E., North, R. A., Kho, E. M., Black, M. A., Chan, E. H. Y., & Dekker, G. A. (2011). Paternal contribution to small for gestational age babies: A multicenter prospective study. Obesity, 19(5), 1035-1039. doi: 10.1038/oby.2010.279

Rossin, E. J., Lage, K., Raychaudhuri, S., Xavier, R. J., Tatar, D., Benita, Y., International Inflammatory Bowel Disease Genetics Constortium, including Roberts, R., Barclay, M., Gearry, R., … Daly, M. J. (2011). Proteins encoded in genomic regions associated with immune-mediated disease physically interact and suggest underlying biology. PLoS Genetics, 7(1), e1001273. doi: 10.1371/journal.pgen.1001273

Lee, W., Luckner, S. R., Kisker, C., Tonge, P. J., & Engels, B. (2011). Elucidation of the protonation states of the catalytic residues in mtKasA: Implications for inhibitor design. Biochemistry, 50(25), 5743-5756. doi: 10.1021/bi200006t

Lopez, J., John, S. W., Tenev, T., Rautureau, G. J. P., Hinds, M. G., Francalanci, F., … Day, C. L., & Meier, P. (2011). CARD-mediated autoinhibition of cIAP1's E3 ligase activity suppresses cell proliferation and migration. Molecular Cell, 42(5), 569-583. doi: 10.1016/j.molcel.2011.04.008

Siakkou, E., Rutledge, M. T., Wilbanks, S. M., & Jameson, G. N. L. (2011). Correlating crosslink formation with enzymatic activity in cysteine dioxygenase. Biochimica et Biophysica Acta: Proteins & Proteomics, 1814, 2003-2009. doi: 10.1016/j.bbapap.2011.07.019

Bordé, E. C., Ouzegdouh, Y., Ledgerwood, E. C., & Morison, I. M. (2011). Congenital thrombocytopenia and cytochrome c mutation: A matter of birth and death. Seminars in Thrombosis & Hemostasis, 37(6), 664-672. doi: 10.1055/s-0031-1291376

Burut-Archanai, S., Eaton-Rye, J. J., & Incharoensakdi, A. (2011). Na⁺-stimulated phosphate uptake system in Synechocystis sp. PCC 6803 with Pst1 as a main transporter. BMC Microbiology, 11, 225. doi: 10.1186/1471-2180-11-225

Merriman, T. R. (2011). Population heterogeneity in the genetic control of serum urate. Seminars in Nephrology, 31(5), 420-425. doi: 10.1016/j.semnephrol.2011.08.005

Dowsett, M., Smith, I., Robertson, J., Robison, L., Pinhel, I., Johnson, L., … Dunbier, A., … Bliss, J. (2011). Endocrine therapy, new biologicals, and new study designs for presurgical studies in breast cancer. Journal of the National Cancer Institute Monographs, 43, 120-123. doi: 10.1093/jncimonographs/lgr034

Dottori, M., Tay, C., & Hughes, S. M. (2011). Neural development in human embryonic stem cells—Applications of lentiviral vectors. Journal of Cellular Biochemistry, 112(8), 1955-1962. doi: 10.1002/jcb.23116

Hawes, T. C., Marshall, C. J., & Wharton, D. A. (2011). Antifreeze proteins in the Antarctic springtail, Gressittacantha terranova. Journal of Comparative Physiology B, 181(6), 713-719. doi: 10.1007/s00360-011-0564-4

North, R. A., McCowan, L. M. E., Dekker, G. A., Poston, L., Chan, E. H. Y., Stewart, A. W., Black, M. A., … Kenny, L. C. (2011). Clinical risk prediction for pre-eclampsia in nulliparous women: Development of model in international prospective cohort. BMJ, 342, d1875. doi: 10.1136/bmj.d1875

Roberts, R. L., van Rij, A. M., Phillips, L. V., Young, S., McCormick, S. P. A., Merriman, T. R., & Jones, G. T. (2011). Interaction of the inflammasome genes CARD8 and NLRP3 in abdominal aortic aneurysms. Atherosclerosis, 218(1), 123-126. doi: 10.1016/j.atherosclerosis.2011.04.043

Sorrenson, B., Suetani, R. J., Bickley, V. M., George, P. M., Williams, M. J. A., Scott, R. S., & McCormick, S. P. A. (2011). An ABCA1 truncation shows no dominant negative effect in a familial hypoalphalipoproteinemia pedigree with three ABCA1 mutations. Biochemical & Biophysical Research Communications, 409(3), 400-405. doi: 10.1016/j.bbrc.2011.05.006

Liptak, M. D., Fagerlund, R. D., Ledgerwood, E. C., Wilbanks, S. M., & Bren, K. (2011). The proapoptotic G41S mutation to human cytochrome c alters the heme electronic structure and increases the electron self-exchange rate. Journal of the American Chemical Society, 133(5), 1153-1155. doi: 10.1021/ja106328k

Lønning, P. E., Haynes, B. P., Straume, A. H., Dunbier, A., Helle, H., Knappskog, S., & Dowsett, M. (2011). Recent data on intratumor estrogens in breast cancer. Steroids, 76(8), 786-791. doi: 10.1016/j.steroids.2011.02.040

Diaz-Gallo, L.-M., Espino-Paisán, L., Fransen, K., Gómez-García, M., van Sommeren, S., Cardeña, C., … Barclay, M. L., … Gearry, R. B., Roberts, R. L., … Merriman, T. R., … Martin, J. (2011). Differential association of two PTPN22 coding variants with Crohn's disease and ulcerative colitis. Inflammatory Bowel Diseases, 17(11), 2287-2294. doi: 10.1002/ibd.21630

Day, R. C., & Beck, C. W. (2011). Transdifferentiation from cornea to lens in Xenopus laevis depends on BMP signalling and involves upregulation of Wnt signalling. BMC Developmental Biology, 11, 54. doi: 10.1186/1471-213x-11-54

Panjaworayan, N., & Brown, C. M. (2011). Effects of HBV genetic variability on RNAi strategies. Hepatitis Research & Treatment, 2011, 367908. doi: 10.1155/2011/367908

Roberts, R. L., Hollis-Moffatt, J. E., Gómez-García, M., Fransen, K., Ponsioen, C. Y., Crusius, B. A., … Merriman, T. R., Barclay, M. L., Gearry, R. B., & Alizadeh, B. Z. (2011). Association of the protein-tyrosine phosphatase nonreceptor type substrate 1 (PTPNS1) gene with inflammatory bowel disease. Inflammatory Bowel Diseases, 17(2), E19-E21. doi: 10.1002/ibd.21470

Glubb, D. M., Gearry, R. B., Barclay, M. L., Roberts, R. L., Pearson, J., Keenan, J. I., McKenzie, J., & Bentley, R. W. (2011). NOD2 and ATG16L1 polymorphisms affect monocyte responses in Crohn's disease. World Journal of Gastroenterology, 17(23), 2829-2837. doi: 10.3748/wjg.v17.i23.2829

Morgan, N. V., Goddard, S., Cardno, T. S., McDonald, D., Rahman, F., Barge, D., Ciupek, A., … Tate, W. P., … Maher, E. R. (2011). Mutation in the TCRα subunit constant gene (TRAC) leads to a human immunodeficiency disorder characterized by a lack of TCRαβ⁺ T cells. Journal of Clinical Investigation, 121(2), 695-702. doi: 10.1172/JCI41931

Herridge, R. P., Day, R. C., Baldwin, S., & Macknight, R. C. (2011). Rapid analysis of seed size in Arabidopsis for mutant and QTL discovery. Plant Methods, 7. doi: 10.1186/1746-4811-7-3

Suetani, R. J., Sorrenson, B., Tyndall, J. D. A., Williams, M. J. A., & McCormick, S. P. A. (2011). Homology modeling and functional testing of an ABCA1 mutation causing Tangier disease. Atherosclerosis, 218(2), 404-410. doi: 10.1016/j.atherosclerosis.2011.06.019

Park, S. J., Kleffmann, T., & Hessian, P. A. (2011). The G82S polymorphism promotes glycosylation of the receptor for advanced glycation end products (RAGE) at Asn81: A comparison of wild-type RAGE with the G82S polymorphic variant. Journal of Biological Chemistry, 286(24), 21384-21392. doi: 10.1074/jbc.M111.241281

Miller, L. D., Coffman, L. G., Chou, J. W., Black, M. A., Bergh, J., Agostino, Jr, R. D., … Torti, F. M. (2011). An iron regulatory gene signature predicts outcome in breast cancer. Cancer Research, 71(21), 6728-6737. doi: 10.1158/0008-5472.can-11-1870

Seed, P. T., Chappell, L. C., Black, M. A., Poppe, K. K., Hwang, Y.-C., Kasabov, N., … North, R. A. (2011). Prediction of preeclampsia and delivery of small for gestational age babies based on a combination of clinical risk factors in high-risk women. Hypertension in Pregnancy, 30(1), 58-73. doi: 10.3109/10641955.2010.486460

Meredith-Jones, K., Waters, D., Legge, M., & Jones, L. (2011). Upright water-based exercise to improve cardiovascular and metabolic health: A qualitative review. Complementary Therapies in Medicine, 19(2), 93-103. doi: 10.1016/j.ctim.2011.02.002

Kemp, R. A., Black, M. A., McCall, J., Yoon, H.-S., Phillips, V., Anjomshoaa, A., & Reeve, A. E. (2011). T cell subpopulations in lymph nodes may not be predictive of patient outcome in colorectal cancer. Journal of Experimental & Clinical Cancer Research, 30, 78. doi: 10.1186/1756-9966-30-78

Dunbier, A. K., Martin, L.-A., & Dowsett, M. (2011). New and translational perspectives of oestrogen deprivation in breast cancer. Molecular & Cellular Endocrinology, 340(2), 137-141. doi: 10.1016/j.mce.2010.12.034

Donaldson, A. E., Walker, N. K., Lamont, I. L., Cordiner, S. J., & Taylor, M. C. (2011). Characterising the dynamics of expirated bloodstain pattern formation using high-speed digital video imaging. International Journal of Legal Medicine, 125, 757-762. doi: 10.1007/s00414-010-0498-5

von Zychlinski, A., Kleffmann, T., Williams, M. J. A., & McCormick, S. P. (2011). Proteomics of Lipoprotein(a) identifies a protein complement associated with response to wounding. Journal of Proteomics, 74, 2881-2891. doi: 10.1016/j.jprot.2011.07.008

Ehimen, E. A., Sun, Z. F., Carrington, C. G., Birch, E. J., & Eaton-Rye, J. J. (2011). Anaerobic digestion of microalgae residues resulting from the biodiesel production process. Applied Energy, 88(10), 3454-3463. doi: 10.1016/j.apenergy.2010.10.020

Soon, W. W., Miller, L. D., Black, M. A., Dalmasso, C., Chan, X. B., Pang, B., … Liu, E. T. (2011). Combined genomic and phenotype screening reveals secretory factor SPINK1 as an invasion and survival factor associated with patient prognosis in breast cancer. EMBO Molecular Medicine, 3(8), 451-464. doi: 10.1002/emmm.201100150

Kalamorz, F., Keis, S., McMillan, D. G. G., Olsson, K., Stanton, J.-A., Stockwell, P., Black, M. A., … Cook, G. M. (2011). Draft genome sequence of the thermoalkaliphilic Caldalkalibacillus thermarum strain TA2.A1. Journal of Bacteriology, 193(16), 4290-4291. doi: 10.1128/jb.05035-11

Im, H., Sharpe, M. L., Strych, U., Davlieva, M., & Krause, K. L. (2011). The crystal structure of alanine racemase from Streptococcus pneumoniae, a target for structure-based drug design. BMC Microbiology, 11, 116. doi: 10.1186/1471-2180-11-116

Draper, R. C., Martin, L. W., Beare, P. A., & Lamont, I. L. (2011). Differential proteolysis of sigma regulators controls cell-surface signaling in Pseudomonas aeruginosa. Molecular Microbiology, 82(6), 1444-1453. doi: 10.1111/j.1365-2958.2011.07901.x

Brownfield, L., & Köhler, C. (2011). Unreduced gamete formation in plants: Mechanisms and prospects. Journal of Experimental Botany, 62(5), 1659-1668. doi: 10.1093/jxb/erq371

Pemberton, C. J., Richards, A. M., Siriwardena, M., Cameron, V. A., Yandle, T. G., Nicholls, M. G., Kleffmann, T., & Ruygrok, P. (2011). [Response to letter regarding article, B-Type natriuretic peptide signal peptide circulates in human blood: Evaluation as a potential biomarker of cardiac ischemia]. Circulation, 123(6), e234. doi: 10.1161/CIRCULATIONAHA.110.003574

Phipps-Green, A., McKinney, C., Rossol, M., Merriman, M. E., Topless, R., Hollis-Moffatt, J. E., Wan Taib, W. R., … Harrison, A. A., Highton, J., … Stamp, L. K., … Merriman, T. R. (2011). Analysis of association of DNASE2 promoter variation with rheumatoid arthritis in European Caucasians [Letter]. Annals of the Rheumatic Diseases, 70(8), 1512-1514. doi: 10.1136/ard.2010.138727

Bentley, R. W., Keown, D., Merriman, T. R., Krishnan, M. R., Gearry, R. B., Barclay, M. L., Roberts, R. L., & Day, A. S. (2011). Vitamin D receptor gene polymorphism associated with inflammatory bowel disease in New Zealand males [Letter to the editor]. Alimentary Pharmacology & Therapeutics, 33(7), 855-856. doi: 10.1111/j.1365-2036.2011.04588.x

Lewis, J. G., Jones, L. M., Legge, M., & Elder, P. A. (2010). Corticosteroid-binding globulin, cortisol, free cortisol, and sex hormone-binding globulin responses following oral glucose challenge in spinal cord-injured and able-bodied men. Hormone & Metabolic Research, 42(12), 882-886. doi: 10.1055/s-0030-1265128

Bokor, A. A. M., van Kan, J. A. L., & Poulter, R. T. M. (2010). Sexual mating of Botrytis cinerea illustrates prp8 intein heg activity. Fungal Genetics & Biology, 47(4), 392-398. doi: 10.1016/j.fgb.2010.01.003

Siriwardena, M., Kleffmann, T., Ruygrok, P., Cameron, V. A., Yandle, T. G., Nicholls, M. G., Richards, A. M., & Pemberton, C. J. (2010). B-type natriuretic peptide signal peptide circulates in human blood. Evaluation as a potential biomarker of cardiac ischemia. Circulation, 122, 255-264. doi: 10.1161/CIRCULATIONAHA.109.909937

Siakkou, E., Wilbanks, S. M., & Jameson, G. N. L. (2010). Simplified cysteine dioxygenase activity assay allows simultaneous quantitation of both substrate and product. Analytical Biochemistry, 405(1), 127-131. doi: 10.1016/j.ab.2010.06.013

Manning, J. A., Shalini, S., Risk, J. M., Day, C. L., & Kumar, S. (2010). A direct interaction with NEDD1 regulates γ-tubulin recruitment to the centrosome. PLoS ONE, 5(3), e9618. doi: 10.1371/journal.pone.0009618

Phipps-Green, A. J., Hollis-Moffatt, J. E., Dalbeth, N., Merriman, M. E., Topless, R., Gow, P. J., Harrison, A. A., Highton, J., … Stamp, L. K., & Merriman, T. R. (2010). A strong role for the ABCG2 gene in susceptibility to gout in New Zealand Pacific Island and Caucasian, but not Māori, case and control sample sets. Human Molecular Genetics, 19(24), 4813-4819. doi: 10.1093/hmg/ddq412

Wharton, D. A., Selvanesan, L., & Marshall, C. J. (2010). Ice-active proteins from New Zealand snow tussocks, Chionochloa macra and c. Rigida. CryoLetters, 31(3), 239-248.

Fenby, N., Pu, H., Pennell, R., Praekelt, U., Day, R., & Scott, R. (2010). An uncoupling screen for autonomous embryo mutants in Arabidopsis thaliana. Sexual Plant Reproduction, 23, 255-264. doi: 10.1007/s00497-010-0142-z

Weersma, R. K., Crusius, J. B. A., Roberts, R. L., Koeleman, B. P. C., Palomino-Morales, R., Wolfkamp, S., Hollis-Moffatt, J. E., … Gearry, R. B., Barclay, M. L., … Merriman, T. R., … Alizadeh, B. Z. (2010). Association of FcgR2a, but not FcgR3a, with inflammatory bowel diseases across three Caucasian populations. Inflammatory Bowel Diseases, 16(12), 2080-2089. doi: 10.1002/ibd.21342

Nelson, W. A., & Broom, J. E. S. (2010). The identity of Porphyra columbina (Bangiales, Rhodophyta) originally described from the New Zealand subantarctic islands. Australian Systematic Botany, 23(1), 16-26. doi: 10.1071/sb09032

Rae-Whitcombe, S. M., Kennedy, D., Voyles, M., & Thompson, M. P. (2010). Regulation of the promoter region of the human adiponutrin/PNPLA3 gene by glucose and insulin. Biochemical & Biophysical Research Communications, 402(4), 767-772. doi: 10.1016/j.bbrc.2010.10.106

Merriman, T. R., & Dalbeth, N. (2010). The genetic basis of hyperuricaemia and gout [Bases génétiques de l'hyperuricémie et de la goutte]. Revue du Rhumatisme Monographies, 77(4), 328-334. doi: 10.1016/j.monrhu.2010.06.006

Ghosh, A., Ali, M. A., Selvanesan, L., & Dias, G. J. (2010). Structure-function characteristics of the biomaterials based on milk-derived proteins. International Journal of Biological Macromolecules, 46, 404-411. doi: 10.1016/j.ijbiomac.2010.02.011

Stamp, L. K., Chapman, P. T., O'Donnell, J. L., Zhang, M., James, J., Frampton, C., Barclay, M. L., Kennedy, M. A., & Roberts, R. L. (2010). Polymorphisms within the folate pathway predict folate concentrations but are not associated with disease activity in rheumatoid arthritis patients on methotrexate. Pharmacogenetics & Genomics, 20(6), 367-376. doi: 10.1097/FPC.0b013e3283398a71

Fitzgerald, R. C., Hardwick, R., Huntsman, D., Carneiro, F., Guilford, P., Blair, V., … on behalf of the International Gastric Cancer Linkage Consortium. (2010). Hereditary diffuse gastric cancer: Updated consensus guidelines for clinical management and directions for future research. Journal of Medical Genetics, 47(7), 436-444. doi: 10.1136/jmg.2009.074237

Wilson, M. J., Havler, M., & Dearden, P. K. (2010). Giant, Krüppel, and caudal act as gap genes with extensive roles in patterning the honeybee embryo. Developmental Biology, 339(1), 200-211. doi: 10.1016/j.ydbio.2009.12.015

Smith, J. M., Cridge, A. G., & Dearden, P. K. (2010). Germ cell specification and ovary structure in the rotifer Brachionus plicatilis. EvoDevo, 1, 5. doi: 10.1186/2041-9139-1-5

Simms, L. A., Doecke, J. D., Roberts, R. L., Fowler, E. V., Zhao, Z. Z., McGuckin, M. A., … McCallum, R., … Barclay, M. L., Gearry, R. B., Merriman, T. R., … Radford-Smith, G. L. (2010). KCNN4 gene variant is associated with ileal Crohn's disease in the Australian and New Zealand population. American Journal of Gastroenterology, 105, 2209-2217. doi: 10.1038/ajg.2010.161

McKinney, C., Fanciulli, M., Merriman, M. E., Phipps-Green, A., Alizadeh, B. Z., Koeleman, B. P. C., … Harrison, A. A., Highton, J., … Stamp, L. K., … Merriman, T. R. (2010). Association of variation in Fcγ receptor 3B gene copy number with rheumatoid arthritis in Caucasian samples. Annals of the Rheumatic Diseases, 69, 1711-1716. doi: 10.1136/ard.2009.123588

Wan Taib, W. R., Smyth, D. J., Merriman, M. E., Dalbeth, N., Gow, P. J., Harrison, A. A., Highton, J., … Stamp, L., … Merriman, T. R. (2010). The PTPN22 locus and rheumatoid arthritis: No evidence for an effect on risk independent of Arg620Trp. PLoS ONE, 5(10), e13544. doi: 10.1371/journal.pone.0013544

Panjaworayan, N., Payungporn, S., Poovorawan, Y., & Brown, C. M. (2010). Identification of an effective siRNA target site and functional regulatory elements, within the hepatitis B virus posttranscriptional regulatory element. Virology Journal, 7, 216. doi: 10.1186/1743-422x-7-216

Machutta, C. A., Bommineni, G. R., Luckner, S. R., Kapilashrami, K., Ruzsicska, B., Simmerling, C., … Tonge, P. J. (2010). Slow onset inhibition of bacterial β-ketoacyl-acyl carrier protein synthases by thiolactomycin. Journal of Biological Chemistry, 285(9), 6161-6169. doi: 10.1074/jbc.M109.077909

Ting, Y. T., Coates, T. P., Marti, H. P., Dunn, A. C., Parker, R. M., Pickering, J. W., Jack, R. W., Kemp, R. A., Walker, R. J., & McLellan, A. D. (2010). Urinary soluble HLA-DR is a potential biomarker for acute renal transplant rejection. Transplantation, 89(9), 1071-1078. doi: 10.1097/TP.0b013e3181d15492

Roberts, R. L., Topless, R. K. G., Phipps-Green, A. J., Gearry, R. B., Barclay, M. L., & Merriman, T. R. (2010). Evidence of interaction of CARD8 rs2043211 with NALP3 rs35829419 in Crohn's disease. Genes & Immunity, 11, 351-356. doi: 10.1038/gene.2010.11

Empson, R. M., Turner, P. R., Nagaraja, R. Y., Beesley, P. W., & Knöpfel, T. (2010). Reduced expression of the Ca²⁺ transporter protein PMCA2 slows Ca²⁺ dynamics in mouse cerebellar Purkinje neurons and alters the precision of motor coordination. Journal of Physiology, 588(6), 907-922. doi: 10.1113/jphysiol.2009.182196

Miller, C., Davlieva, M., Wilson, C., White, K. I., Couñago, R., & et al (2010). Experimental evolution of adenylate kinase reveals contrasting strategies toward protein thermostability. Biophysical Journal, 99(3), 887-896. doi: 10.1016/j.bpj.2010.04.076

Liew, C. W., Sun, H., Hunter, T., & Day, C. L. (2010). RING domain dimerization is essential for RNF4 function. Biochemical Journal, 431(1), 23-29. doi: 10.1042/BJ20100957

Mai, P. L., Friedlander, M., Tucker, K., Phillips, K.-A., Hogg, D., Jewett, M. A. S., … Guilford, P., … Greene, M. H. (2010). The International Testicular Cancer Linkage Consortium: A clinicopathologic descriptive analysis of 461 familial malignant testicular germ cell tumor kindred. Urologic Oncology, 28(5), 492-499. doi: 10.1016/j.urolonc.2008.10.004

Bahlo, M., Stankovich, J., Danoy, P., Hickey, P. F., Taylor, B. V., Browning, S. R., the Australian and New Zealand Multiple Sclerosis Genetics Consortium (ANZgene), … also Clarke, G., McCallum, R., Merriman, M., Merriman, T., & Mason, D. (2010). Saliva-derived DNA performs well in large-scale, high-density single-nucleotide polymorphism microarray studies. Cancer Epidemiology, Biomarkers & Prevention, 19(3), 794-798. doi: 10.1158/1055-9965.EPI-09-0812

Brace, R. J., Sorrenson, B., Sviridov, D., & McCormick, S. P. A. (2010). A gel-based method for purification of apolipoprotein A-I from small volumes of plasma. Journal of Lipid Research, 51, 3370-3376. doi: 10.1194/jlr.D008300

Rautureau, G. J. P., Day, C. L., & Hinds, M. G. (2010). Intrinsically disordered proteins in Bcl-2 regulated apoptosis. International Journal of Molecular Sciences, 11(4), 1808-1824. doi: 10.3390/ijms11041808

The International Aphid Genomics Consortium, including Smith, J., Wilson, M., Dearden, P., & Duncan, E. J. (2010). Genome sequence of the pea aphid Acyrthosiphon pisum. PLoS Biology, 8(2), e1000313. doi: 10.1371/journal.pbio.1000313

Dickson, G. C., Poulter, R. T. M., Maas, E. W., Probert, P. K., & Kieser, J. A. (2010). Marine bacterial succession as a potential indicator of postmortem submersion interval. Forensic Science International, 209(1-3), 1-10. doi: 10.1016/j.forsciint.2010.10.016

Luckner, S. R., Liu, N., am Ende, C. W., Tonge, P. J., & Kisker, C. (2010). A slow, tight binding inhibitor of InhA, the enoyl-acyl carrier protein reductase from Mycobacterium tuberculosis. Journal of Biological Chemistry, 285(19), 14330-14337. doi: 10.1074/jbc.M109.090373

Guise, C. P., Abbattista, M. R., Singleton, R. S., Holford, S. D., Connolly, J., Dachs, G. U., Fox, S. B., Pollock, R., Harvey, J., Guilford, P., … Patterson, A. V. (2010). The bioreductive prodrug PR-104A is activated under aerobic conditions by human aldo-keto reductase 1C3. Cancer Research, 70(4), 1573-1584. doi: 10.1158/0008-5472.CAN-09-3237

Bernhardt, H. S., & Tate, W. P. (2010). The transition from noncoded to coded protein synthesis: Did coding mRNAs arise from stability-enhancing binding partners to tRNA? Biology Direct, 5, 16. doi: 10.1186/1745-6150-5-16

Feltham, R., Moulin, M., Vince, J. E., Mace, P. D., Wong, W. W.-L., Anderton, H., Day, C. L., … Silke, J. (2010). Tumor necrosis factor (TNF) signaling, but not TWEAK (TNF-like weak inducer of apoptosis)-triggered cIAP1 (cellular inhibitor of apoptosis protein 1) degradation, requires cIAP1 RING dimerization and E2 binding. Journal of Biological Chemistry, 285(23), 17525-17536. doi: 10.1074/jbc.M109.087635

Shigenobu, S., Bickel, R. D., Brisson, J. A., Butts, T., Chang, C.-C., Christiaens, O., … Duncan, E. J., … Smith, J., … Wilson, M. J., Dearden, P. K., & Stern, D. L. (2010). Comprehensive survey of developmental genes in the pea aphid, Acyrthosiphon pisum: Frequent lineage-specific duplications and losses of developmental genes. Insect Molecular Biology, 19(Suppl. 2), 47-62. doi: 10.1111/j.1365-2583.2009.00944.x

Fukuzawa, R., Holman, S. K., Chow, C. W., Savarirayan, R., Reeve, A. E., & Robertson, S. P. (2010). WTX mutations can occur both early and late in the pathogenesis of Wilms tumour. Journal of Medical Genetics, 47, 791-794. doi: 10.1136/jmg.2010.080663

Milev, M. P., Brown, C. M., & Mouland, A. J. (2010). Live cell visualization of the interactions between HIV-1 Gag and the cellular RNA-binding protein Staufen1. Retrovirology, 7, 41. doi: 10.1186/1742-4690-7-41

Rautureau, G. J. P., Day, C. L., & Hinds, M. G. (2010). The structure of Boo/Diva reveals a divergent Bcl-2 protein. Proteins, 78(9), 2181-2186. doi: 10.1002/prot.22728

Yeterian, E., Martin, L. W., Lamont, I. L., & Schalk, I. J. (2010). An efflux pump is required for siderophore recycling by Pseudomonas aeruginosa. Environmental Microbiology Reports, 2(3), 412-418. doi: 10.1111/j.1758-2229.2009.00115.x

Weeks, R. J., Kees, U. R., Song, S., & Morison, I. M. (2010). Silencing of TESTIN by dense biallelic promoter methylation is the most common molecular event in childhood acute lymphoblastic leukaemia. Molecular Cancer, 9, 163. doi: 10.1186/1476-4598-9-163

Gerardo, N. M., Altincicek, B., Anselme, C., Atamian, H., Barribeau, S. M., de Vos, M., Duncan, E. J., … Vilcinskas, A. (2010). Immunity and other defenses in pea aphids, Acyrthosiphon pisum. Genome Biology, 11(2), R21. doi: 10.1186/gb-2010-11-2-r21

Yeterian, E., Martin, L. W., Guillon, L., Journet, L., Lamont, I. L., & Schalk, I. J. (2010). Synthesis of the siderophore pyoverdine in Pseudomonas aeruginosa involves a periplasmic maturation. Amino Acids, 38(5), 1447-1459. doi: 10.1007/s00726-009-0358-0

Rhodes, B., Merriman, M. E., Harrison, A., Nissen, M. J., Smith, M., Stamp, L., … Merriman, T. R., & Vyse, T. J. (2010). A genetic association study of serum acute-phase C-reactive protein levels in rheumatoid arthritis: Implications for clinical interpretation. PLoS Medicine, 7(9), e1000341. doi: 10.1371/journal.pmed.1000341

Stebbings, S., Jenks, K., Roberts, R., & Schultz, M. (2010). The immune response to gut bacteria in spondyloarthritis: A role in pathogenesis? Journal of Clinical Rheumatology & Musculoskeletal Medicine, 1(2).

Mace, P. D., Shirley, S., & Day, C. L. (2010). Assembling the building blocks: Structure and function of inhibitor of apoptosis proteins. Cell Death & Differentiation, 17, 46-53. doi: 10.1038/cdd.2009.45

Broom, J. E. S., Nelson, W. A., Farr, T. J., Phillips, L., & Clayton, M. (2010). Relationships of the Porphyra (Bangiales, Rhodophyta) flora of the Falkland Islands: A molecular survey using rbcL and nSSU sequence data. Australian Systematic Botany, 23(1), 27-37. doi: 10.1071/sb09033

Bentley, R. W., Pearson, J., Gearry, R. B., Barclay, M. L., McKinney, C., Merriman, T. R., & Roberts, R. L. (2010). Association of higher DEFB4 genomic copy number with Crohn's disease. American Journal of Gastroenterology, 105(2), 354-359. doi: 10.1038/ajg.2009.582

Smith, K. F., Acosta, H., Broom, J. E., & Rhodes, L. L. (2010). Identification of non-indigenous marine macroalgae from New Zealand aquaria outlets. New Zealand Journal of Marine & Freshwater Research, 44(1), 29-37. doi: 10.1080/00288331003641679

Stuart, E. C., Jarvis, R. M., & Rosengren, R. J. (2010). In vitro mechanism of action for the cytotoxicity elicited by the combination of epigallocatechin gallate and raloxifene in MDA-MB-231 cells. Oncology Reports, 24(3), 779-785. doi: 10.3892/or_00000921

Young, D. J., Edgar, C. D., Murphy, J., Fredebohm, J., Poole, E. S., & Tate, W. P. (2010). Bioinformatic, structural, and functional analyses support release factor-like MTRF1 as a protein able to decode nonstandard stop codons beginning with adenine in vertebrate mitochondria. RNA, 16(6), 1146-1155. doi: 10.1261/rna.1970310

Donaldson, A., Taylor, M. C., Cordiner, S. J., & Lamont, I. L. (2010). Using oral microbial DNA analysis to identify expirated bloodspatter. International Journal of Legal Medicine, 124(6), 569-576. doi: 10.1007/s00414-010-0426-8

Porteous, C. M., Logan, A., Evans, C., Ledgerwood, E. C., Menon, D. K., Aigbirhio, F., Smith, R. A. J., & Murphy, M. P. (2010). Rapid uptake of lipophilic triphenylphosphonium cations by mitochondria in vivo following intravenous injection: Implications for mitochondria-specific therapies and probes. Biochimica et Biophysica Acta: General Subjects, 1800(9), 1009-1017. doi: 10.1016/j.bbagen.2010.06.001

McMillan, D. G. G., Velasquez, I., Nunn, B. L., Goodlett, D. R., Hunter, K. A., Lamont, I., Sander, S. G., & Cook, G. M. (2010). Acquisition of iron by alkaliphilic Bacillus species. Applied & Environmental Microbiology, 76(20), 6955-6961. doi: 10.1128/AEM.01393-10

Risk, J. M., Laurie, R. E., Macknight, R. C., & Day, C. L. (2010). FRIGIDA and related proteins have a conserved central domain and family specific N- and C- terminal regions that are functionally important. Plant Molecular Biology, 73, 493-505. doi: 10.1007/s11103-010-9635-2

Couñago, R. M., Fleming, S. B., Mercer, A. A., & Krause, K. L. (2010). Crystallization and preliminary X-ray analysis of the chemokine-binding protein from orf virus (Poxviridae). Acta Crystallographica Section F, F66, 819-823. doi: 10.1107/S1744309110018166

Tian, P., & Legge, M. (2010). Cryosolvent interaction with cellular actin using 3T3-LI cells as a model system. Cryobiology, 61(3), 357-359. doi: 10.1016/j.cryobiol.2010.09.008

Pedersen, T. X., McCormick, S. P., Tsimikas, S., Bro, S., & Nielsen, L. B. (2010). Lipoprotein(a) accelerates atherosclerosis in uremic mice. Journal of Lipid Research, 51(10), 2967-2975. doi: 10.1194/jlr.M006742

Ariazi, E. A., Brailoiu, E., Yerrum, S., Shupp, H. A., Slifker, M. J., Cunliffe, H. E., Black, M. A., … Jordan, V. C. (2010). The G protein-coupled receptor GPR30 inhibits proliferation of estrogen receptor-positive breast cancer cells. Cancer Research, 70(3), 1184-1194. doi: 10.1158/0008-5472.CAN-09-3068

Kafka, A. P., Kleffmann, T., Rades, T., & McDowell, A. (2010). Characterization of peptide polymer interactions in poly(alkylcyanoacrylate) nanoparticles: A mass spectrometric approach. Current Drug Delivery, 7(3), 208-215.

Rhodes, J. M., Bentley, F. K., Print, C. G., Dorsett, D., Misulovin, Z., Dickinson, E. J., … Horsfield, J. A. (2010). Positive regulation of c-Myc by cohesin is direct, and evolutionarily conserved. Developmental Biology, 344, 637-649. doi: 10.1016/j.ydbio.2010.05.493

Crump, R. J., Fitzgerald, R. P., & Legge, M. (2010). 'Going-to-have-cancerness': A study of living with increased risk of BRCA1 and BRCA2 mutations for six South Island women. Journal of Primary Health Care, 2(4), 311-317. doi: 10.1071/HC10311

Nasri, S., Anjomshoaa, A., Song, S., Guilford, P., McNoe, L., Black, M., Phillips, V., Reeve, A., & Humar, B. (2010). Oligonucleotide array outperforms SNP array on formalin-fixed paraffin-embedded clinical samples. Cancer Genetics & Cytogenetics, 198(1), 1-6. doi: 10.1016/j.cancergencyto.2009.12.002

Guilford, P., Humar, B., & Blair, V. (2010). Hereditary diffuse gastric cancer: Translation of CDH1 germline mutations into clinical practice. Gastric Cancer, 13(1), 1-10. doi: 10.1007/s10120-009-0531-x

Jackson, S. A., Fagerlund, R. D., Wilbanks, S. M., & Eaton-Rye, J. J. (2010). Crystal structure of PsbQ from Synechocystis sp. PCC 6803 at 1.8 Å: Implications for binding and function in cyanobacterial photosystem II. Biochemistry, 49(13), 2765-2767. doi: 10.1021/bi100217h

Nakatani, Y., Lamont, I. L., & Cutfield, J. F. (2010). Discovery and characterization of a distinctive exo-1,3/1,4-β-glucanase from the marine bacterium Pseudoalteromonas sp. strain BB1. Applied & Environmental Microbiology, 76(20), 6760-6768. doi: 10.1128/AEM.00758-10

Bouwer, A. L., Netter, P., Kemp, R. A., & McLellan, A. D. (2010). A defined serum-free medium useful for monitoring anti-melanoma responses induced by dendritic cell immunotherapy. Journal of Immunological Methods, 352, 178-181. doi: 10.1016/j.jim.2009.11.001

Hollis-Moffatt, J. E., Chen-Xu, M., Topless, R., Dalbeth, N., Gow, P. J., Harrison, A. A., Highton, J., … van Rij, A., Jones, G. T., Stamp, L. K., & Merriman, T. R. (2010). Only one independent genetic association with rheumatoid arthritis within the KIAA1109-TENR-IL2-IL21 locus in Caucasian sample sets: Confirmation of association of rs6822844 with rheumatoid arthritis at a genome-wide level of significance. Arthritis Research & Therapy, 12(3), R116. doi: 10.1186/ar3053

Mace, P. D., Smits, C., Vaux, D. L., Silke, J., & Day, C. L. (2010). Asymmetric recruitment of cIAPs by TRAF2. Journal of Molecular Biology, 400, 8-15. doi: 10.1016/j.jmb.2010.04.055

Wilson, M. J., McKelvey, B. H., van der Heide, S., & Dearden, P. K. (2010). Notch signaling does not regulate segmentation in the honeybee, Apis mellifera. Development Genes & Evolution, 220(7-8), 179-190. doi: 10.1111/j.1365-2826.2010.02100.x

Duncan, E. J., & Dearden, P. K. (2010). Evolution of a genomic regulatory domain: The role of gene co-option and gene duplication in the enhancer of split complex. Genome Research, 20, 917-928. doi: 10.1101/gr.104794.109

Patrick, W. M., Nakatani, Y., Cutfield, S. M., Sharpe, M. L., Ramsay, R. J., & Cutfield, J. F. (2010). Carbohydrate binding sites in Candida albicans exo-β-1,3-glucanase and the role of the Phe-Phe 'clamp' at the active site entrance. FEBS Journal, 277, 4549-4561. doi: 10.1111/j.1742-4658.2010.07869.x

Hohmann-Marriott, M. F., Takizawa, K., Eaton-Rye, J. J., Mets, L., & Minagawa, J. (2010). The redox state of the plastoquinone pool directly modulates minimum chlorophyll fluorescence yield in Chlamydomonas reinhardtii. FEBS Letters, 584, 1021-1026. doi: 10.1016/j.febslet.2010.01.052

Simpson, G. G., Laurie, R. E., Dijkwel, P. P., Quesada, V., Stockwell, P. A., Dean, C., & Macknight, R. C. (2010). Noncanonical translation initiation of the Arabidopsis flowering time and alternative polyadenylation regulator FCA. Plant Cell, 22(11), 3764-3777. doi: 10.1105/tpc.110.077990

Young, D. J., Edgar, C. D., Poole, E. S., & Tate, W. P. (2010). The codon specificity of eubacterial release factors is determined by the sequence and size of the recognition loop. RNA, 16, 1623-1633. doi: 10.1261/rna.2117010

Bentley, R. W., Cleynen, I., Gearry, R. B., Barclay, M. L., Rutgeerts, P., Merriman, T. R., … Roberts, R. L., & Vermeire, S. (2010). Evidence that glioma-associated oncogene homolog 1 is not a universal risk gene for inflammatory bowel disease in Caucasians. Genes & Immunity, 11, 509-514. doi: 10.1038/gene.2010.15

Kikuchi, N., Arai, S., Yoshida, G., Shin, J.-A., Broom, J. E., Nelson, W. A., & Miyata, M. (2010). Porphyra migitae sp. nov. (Bangiales, Rhodophyta) from Japan. Phycologia, 49(4), 345-354. doi: 10.2216/09-82.1

Roberts, R. L., Gearry, R. B., & Barclay, M. L. (2010). Allopurinol—thiopurine combination therapy in inflammatory bowel disease: Are there genetic clues to this puzzle? [Editorial]. Pharmacogenomics, 11(11), 1505-1508. doi: 10.2217/pgs.10.143

Roberts, R. L., Zhang, M., Marinaki, A. M., & Stamp, L. K. (2010). Does genetic variability in aldehyde oxidase and molybdenum cofactor sulfurase predict nonresponse to allopurinol? [Letter to the editors]. Alimentary Pharmacology & Therapeutics, 32(2), 310-311. doi: 10.1111/j.1365-2036.2010.04349.x

Schultz, M., Roberts, R. L., & Butt, A. G. (2010). Understanding probiotic treatment strategies in inflammatory bowel disease, with a special emphasis on the intestinal barrier. European Gastroenterology & Hepatology Review, 6(1), 58-65.

McKinney, C. (2010). [Review of the book Artscience: Creativity in the post-Google generation]. Junctures, 13, 93-94.

Hollis-Moffatt, J. E., Gearry, R. B., Barclay, M. L., Merriman, T. R., & Roberts, R. L. (2010). Consolidation of evidence for association of the KIAA1109-TENR-IL2-IL21 rs6822844 variant with Crohn's disease [Letter]. American Journal of Gastroenterology, 105(5), 1204-1205. doi: 10.1038/ajg.2010.34

Roberts, R. L., Merriman, T. R., & Upton, J. D. (2010). High frequency of MCM6 lactose intolerance genotype in Polynesian People [Letter to the editor]. Alimentary Pharmacology & Therapeutics, 32(6), 828-829. doi: 10.1111/j.1365-2036.2010.04398.x

Rodpothong, P., Sullivan, J. T., Songsrirote, K., Sumpton, D., Cheung, K. W. J.-T., Thomas-Oates, J., … Ronson, C. W. (2009). Nodulation gene mutants of Mesorhizobium loti R7A—nodZ and nolL mutants have host-specific phenotypes on Lotus spp. Molecular Plant-Microbe Interactions, 22(12), 1546-1554. doi: 10.1094/MPMI-22-12-1546

Claasen, A. M., Guévremont, D., Mason-Parker, S. E., Bourne, K., Tate, W. P., Abraham, W. C., & Williams, J. M. (2009). Secreted amyloid precursor protein-α upregulates synaptic protein synthesis by a protein kinase G-dependent mechanism. Neuroscience Letters, 460, 92-96. doi: 10.1016/j.neulet.2009.05.040

Wharton, D. A., & Marshall, C. J. (2009). How do terrestrial Antarctic organisms survive in their harsh environment? Journal of Biology, 8, 39. doi: 10.1186/jbiol142

Bishop, P. J., Speare, R., Poulter, R., Butler, M., Speare, B. J., Hyatt, A., … Haigh, A. (2009). Elimination of the amphibian chytrid fungus Batrachochytrium dendrobatidis by Archey's frog Leiopelma archeyi. Diseases of Aquatic Organisms, 84(1), 9-15. doi: 10.3354/dao02028

Romanel, E. A. C., Schrago, C. G., Couñago, R. M., Russo, C. A. M., & Alves-Ferreira, M. (2009). Evolution of the B3 DNA binding superfamily: New insights into REM family gene diversification. PLoS ONE, 4(6), e5791. doi: 10.1371/journal.pone.0005791

Dearden, P. K., Duncan, E. J., & Wilson, M. J. (2009). Rna interference (RNAi) in honeybee (Apis mellifera) embryos. Cold Spring Harbor Protocols, 4(6). doi: 10.1101/pdb.prot5228

Jackson, A. P., Gamble, J. A., Yeomans, T., Moran, G. P., Saunders, D., Harris, D., … Goodwin, T. J., … Poulter, R. T., … Berriman, M. (2009). Comparative genomics of the fungal pathogens Candida dubliniensis and Candida albicans. Genome Research, 19(12), 2231-2244. doi: 10.1101/gr.097501.109

Wu, S. H., Black, M. A., North, R. A., Atkinson, K. R., & Rodrigo, A. G. (2009). A statistical model to identify differentially expressed proteins in 2D PAGE gels. PLoS Computational Biology, 5(9), e1000509. doi: 10.1371/journal.pcbi.1000509

Wilson, M. J., & Dearden, P. K. (2009). Tailless patterning functions are conserved in the honeybee even in the absence of Torso signaling. Developmental Biology, 335(1), 276-287. doi: 10.1016/j.ydbio.2009.09.002

Kho, E. M., McCowan, L. M. E., North, R. A., Roberts, C. T., Chan, E., Black, M. A., … on behalf of the SCOPE Consortium. (2009). Duration of sexual relationship and its effect on preeclampsia and small for gestational age perinatal outcome. Journal of Reproductive Immunology, 82(1), 66-73. doi: 10.1016/j.jri.2009.04.011

Bird, S. D., Walker, R. J., & Legge, M. (2009). L-Cysteine improves survival and growth of mesothelial cells after freezing. Cell Biology International, 33(11), 1155-1164. doi: 10.1016/j.cellbi.2009.08.003

Zou, D., Yoon, H.-S., Anjomshoaa, A., Perez, D., Fukuzawa, R., Guilford, P., & Humar, B. (2009). Increased levels of active c-Src distinguish invasive from in situ lobular lesions. Breast Cancer Research, 11(4), R45. doi: 10.1186/bcr2332

Fukuzawa, R., Anaka, M. R., Weeks, R. J., Morison, I. M., & Reeve, A. E. (2009). Canonical WNT signalling determines lineage specificity in Wilms tumour. Oncogene, 28(8), 1063-1075. doi: 10.1038/onc.2008.455

Nordang, G. B. N., Viken, M. K., Hollis-Moffatt, J. E., Merriman, T. R., Førre, Ø. T., Helgetveit, K., … Lie, B. A. (2009). Association analysis of the interleukin 17A gene in caucasian rheumatoid arthritis patients from Norway and New Zealand. Rheumatology, 48(4), 367-370. doi: 10.1093/rheumatology/ken512

Dong, C., Poulter, R. T., & Han, J. S. (2009). Line-like retrotransposition in Saccharomyces cerevisiae. Genetics, 181(1), 301-311.

Jacobs, G. H., Chen, A., Stevens, S. G., Stockwell, P. A., Black, M. A., Tate, W. P., & Brown, C. M. (2009). Transterm: A database to aid the analysis of regulatory sequences in mRNAs. Nucleic Acids Research, 37(Database issue), D72-D76. doi: 10.1093/nar/gkn763

Dalbeth, N., & Merriman, T. (2009). Crystal ball gazing: New therapeutic targets for hyperuricaemia and gout. Rheumatology, 48(3), 222-226. doi: 10.1093/rheumatology/ken460

Sharp, C. F., Gardiner, S. J., Jensen, B. P., Roberts, R. L., Troughton, R. W., Lainchbury, J. G., & Begg, E. J. (2009). CYP2D6 genotype and its relationship with metoprolol dose, concentrations and effect in patients with systolic heart failure. Pharmacogenomics Journal, 9(3), 175-184. doi: 10.1038/tpj.2009.9

Anjomshoaa, A., Nasri, S., Humar, B., McCall, J. L., Chatterjee, A., Yoon, H.-S., McNoe, L., Black, M. A., & Reeve, A. E. (2009). Slow proliferation as a biological feature of colorectal cancer metastasis. British Journal of Cancer, 101(5), 822-828. doi: 10.1038/sj.bjc.6605229

Risk, J. M., Day, C. L., & Macknight, R. C. (2009). Reevaluation of abscisic acid-binding assays shows that G-Protein-Coupled Receptor2 does not bind abscisic acid. Plant Physiology, 150(1), 6-11.

Zou, D., Yoon, H.-S., Perez, D., Weeks, R. J., Guilford, P., & Humar, B. (2009). Epigenetic silencing in non-neoplastic epithelia identifies E-cadherin (CDH1) as a target for chemoprevention of lobular neoplasia. Journal of Pathology, 218(2), 265-272. doi: 10.1002/path.2541

Dearden, P. K., Duncan, E. J., & Wilson, M. J. (2009). Immunohistochemistry on honeybee (Apis mellifera) embryos. Cold Spring Harbor Protocols, 4(6). doi: 10.1101/pdb.prot5227

Dearden, P. K., Duncan, E. J., & Wilson, M. J. (2009). In situ hybridization of sectioned honeybee (Apis mellifera) tissues. Cold Spring Harbor Protocols, 4(6). doi: 10.1101/pdb.prot5226

Prime, T. A., Blaikie, F. H., Evans, C., Nadtochiy, S. M., James, A. M., Dahm, C. C., … Smith, R. A. J., & Murphy, M. P. (2009). A mitochondria-targeted S-nitrosothiol modulates respiration, nitrosates thiols, and protects against ischemia-reperfusion injury. PNAS, 106(26), 10764-10769. doi: 10.1073/pnas.0903250106

Mettrick, K. A., & Lamont, I. L. (2009). Different roles for anti-sigma factors in siderophore signalling pathways of Pseudomonas aeruginosa. Molecular Microbiology, 74(5), 1257-1271. doi: 10.1111/j.1365-2958.2009.06932.x

Hueber, P.-A., Fukuzawa, R., Elkares, R., Chu, L., Blumentkrantz, M., He, S.-J., Anaka, M. R., Reeve, A. E., Eccles, M. R., … Goodyer, P. R. (2009). PAX3 is expressed in the stromal compartment of the developing kidney and in Wilms tumors with myogenic phenotype. Pediatric & Developmental Pathology, 12(5), 347-354. doi: 10.2350/08-05-0466.1

Ramsay, J. P., Sullivan, J. T., Jambari, N., Ortori, C. A., Heeb, S., Williams, P., … Lamont, I. L., & Ronson, C. W. (2009). A LuxRI-family regulatory system controls excision and transfer of the Mesorhizobium loti strain R7A symbiosis island by activating expression of two conserved hypothetical genes. Molecular Microbiology, 73(6), 1141-1155. doi: 10.1111/j.1365-2958.2009.06843.x

Margueron, R., Justin, N., Ohno, K., Sharpe, M. L., Son, J., Drury. III, W. J., … Gamblin, S. J. (2009). Role of the polycomb protein EED in the propagation of repressive histone marks. Nature, 431, 762-767. doi: 10.1038/nature08398

Atkinson, K. R., Blumenstein, M., Black, M. A., Wu, S. H., Kasabov, N., Taylor, R. S., … on behalf of the SCOPE Consortium. (2009). An altered pattern of circulating apolipoprotein E3 isoforms is implicated in preeclampsia. Journal of Lipid Research, 50, 71-80. doi: 10.1194/jlr.M800296-JLR200

Trnka, J., Blaikie, F. H., Logan, A., Smith, R. A. J., & Murphy, M. P. (2009). Antioxidant properties of MitoTEMPOL and its hydroxylamine. Free Radical Research, 43(1), 4-12. doi: 10.1080/10715760802582183

Wharton, D. A., Pow, B., Kristensen, M., Ramløv, H., & Marshall, C. J. (2009). Ice-active proteins and cryoprotectants from the New Zealand alpine cockroach, Celatoblatta quinquemaculata. Journal of Insect Physiology, 55(1), 27-31. doi: 10.1016/j.jinsphys.2008.09.007

Graziano, F., Ruzzo, A., Canestrari, E., Loupakis, F., Santini, D., Rulli, E., Humar, B., & et al (2009). Variations in the interleukin-1 receptor antagonist gene impact on survival of patients with advanced colorectal cancer. Pharmacogenomics Journal, 9(1), 78-84. doi: 10.1038/tpj.2008.16

Jones, L. M., Meredith-Jones, K., & Legge, M. (2009). The effect of water-based exercise on glucose and insulin response in overweight women: A pilot study. Journal of Women's Health, 18(10), 1653-1659. doi: 10.1089/jwh.2008.1147

Vince, J. E., Pantaki, D., Feltham, R., Mace, P. D., Cordier, S. M., Schmukle, A. C., … Day, C. L., … Silke, J. (2009). TRAF2 must bind to cellular inhibitors of apoptosis for tumor necrosis factor (TNF) to efficiently activate NF-κB and to prevent TNF-induced apoptosis. Journal of Biological Chemistry, 284(51), 35906-35915. doi: 10.1074/jbc.M109.072256

Hollis-Moffatt, J. E., Rowley, K. A., Phipps-Green, A. J., Merriman, M. E., Dalbeth, N., Gow, P., Harrison, A. A., Highton, J., … Stamp, L. K., … Merriman, T. R. (2009). The ITGAV rs3738919 variant and susceptibility to rheumatoid arthritis in four Caucasian sample sets. Arthritis Research & Therapy, 11, R152. doi: 10.1186/ar2828

Dewson, G., Kratina, T., Czabotar, P., Day, C. L., Adams, J. M., & Kluck, R. M. (2009). Bak activation for apoptosis involves oligomerization of dimers via their α6 helices. Molecular Cell, 36(4), 696-703. doi: 10.1016/j.molcel.2009.11.008

The Australia and New Zealand Multiple Sclerosis Genetics Consortium (ANZgene), including Clarke, G., McCallum, R., Merriman, M., Merriman, T., & Mason, D. (2009). Genome-wide association study identifies new multiple sclerosis susceptibility loci on chromosomes 12 and 20. Nature Genetics, 41(7), 824-828. doi: 10.1038/ng.396

Hohmann-Marriott, M. F., Sousa, A. A., Azari, A. A., Glushakova, S., Zhang, G., Zimmerberg, J., & Leapman, R. D. (2009). Nanoscale 3D cellular imaging by axial scanning transmission electron tomography. Nature Methods, 6(10), 729-731. doi: 10.1038/nmeth.1367

Isely, N., Lamare, M., Marshall, C., & Barker, M. (2009). Expression of the DNA repair enzyme, photolyase, in developmental tissues and larvae, and in response to ambient UV-R in the Antarctic sea urchin Sterechinus neumayeri. Photochemistry & Photobiology, 85(5), 1168-1176. doi: 10.1111/j.1751-1097.2009.00566.x

Heesch, S., Broom, J. E. S., Neill, K. F., Farr, T. J., Dalen, J. L., & Nelson, W. A. (2009). Ulva, Umbraulva and Gemina: Genetic survey of New Zealand taxa reveals diversity and introduced species. European Journal of Phycology, 44(2), 143-154. doi: 10.1080/09670260802422477

Jones, L. M., & Legge, M. (2009). Biochemical markers of bone activity in active and sedentary spinal cord injured men. New Zealand Journal of Medical Laboratory Science, 63(2), 40-43.

Sowerby, S. J., & Petersen, G. B. (2009). A proposition for single molecule DNA sequencing through a nanopore entropie trap. International Journal of Nanotechnology, 6(3-4), 398-407. doi: 10.1504/IJNT.2009.022928

Jenkins, Z. A., van Kogelenberg, M., Morgan, T., Jeffs, A., Fukuzawa, R., Pearl, E., … Robertson, S. P. (2009). Germline mutations in WTX cause a sclerosing skeletal dysplasia but do not predispose to tumorigenesis. Nature Genetics, 41(1), 95-100. doi: 10.1038/ng.270

Specht, D., Wu, S.-b., Turner, P., Dearden, P., Koentgen, F., Wolfrum, U., Maw, M., … tom Dieck, S. (2009). Effects of presynaptic mutations on a postsynaptic Cacna1s calcium channel colocalized with mGluR6 at mouse photoreceptor ribbon synapses. Investigative Ophthalmology & Visual Science, 50(2), 505-515. doi: 10.1167/iovs.08-2758

Wang, Y.-T., von Zychlinski, A., & McCormick, S. P. A. (2009). Dimyristoylphosphotidylcholine induces conformational changes in apoB that lowers lipoprotein(a). Journal of Lipid Research, 50(5), 846-853. doi: 10.1194/jlr.M800428-JLR200

Humar, B., Blair, V., Charlton, A., More, H., Martin, I., & Guilford, P. (2009). E-cadherin deficiency initiates gastric signet-ring cell carcinoma in mice and man. Cancer Research, 69(5), 2050-2056.

Meredith-Jones, K., Legge, M., & Jones, L. M. (2009). Circuit based deep water running improves cardiovascular fitness, strength and abdominal obesity in older, overweight women: Aquatic exercise intervention in older adults. Medicina Sportiva, 13(1), 5-12. doi: 10.2478/v10036-009-0002-9

Cardno, T. S., Poole, E. S., Mathew, S. F., Graves, R., & Tate, W. P. (2009). A homogeneous cell-based bicistronic fluorescence assay for high-throughput identification of drugs that perturb viral gene recoding and read-through of nonsense stop codons. RNA, 15(8), 1614-1621. doi: 10.1261/rna.1586709

Couñago, R. M., Davlieva, M., Strych, U., Hill, R. E., & Krause, K. L. (2009). Biochemical and structural characterization of alanine racemase from Bacillus anthracis (ames). BMC Structural Biology, 9, 53. doi: 10.1186/1472-6807-9-53

Schalk, I. J., Lamont, I. L., & Cobessi, D. (2009). Structure-function relationships in the bifunctional ferrisiderophore FpvA receptor from Pseudomonas aeruginosa. Biometals, 22(4), 671-678. doi: 10.1007/s10534-008-9203-2

Merriman, T. R. (2009). Type 1 diabetes, the A1 milk hypothesis and vitamin D deficiency. Diabetes Research & Clinical Practice, 83(2), 149-156. doi: 10.1016/j.diabres.2008.11.010

Dearden, P. K., Duncan, E. J., & Wilson, M. J. (2009). The honeybee Apis mellifera. Cold Spring Harbor Protocols, 4(6). doi: 10.1101/pdb.emo123

Dearden, P. K., Duncan, E. J., & Wilson, M. J. (2009). Whole-mount in situ hybridization of honeybee (Apis mellifera) tissues. Cold Spring Harbor Protocols, 4(6). doi: 10.1101/pdb.prot5225

Westphal, D., Ledgerwood, E. C., Tyndall, J. D. A., Hibma, M. H., Ueda, N., Fleming, S. B., & Mercer, A. A. (2009). The orf virus inhibitor of apoptosis functions in a Bcl-2-like manner, binding and neutralizing a set of BH3-only proteins and active Bax. Apoptosis, 14(11), 1317-1330. doi: 10.1007/s10495-009-0403-1

Lu, A.-T. T., Salpeter, S. R., Reeve, A. E., Eschrich, S., Johnston, P. G., Barrier, A. J., … Lin, A. Y. (2009). Gene expression profiles as predictors of poor outcomes in stage II colorectal cancer: A systematic review and meta-analysis. Clinical Colorectal Cancer, 8(4), 207-214. doi: 10.3816/CCC.2009.n.035

Hollis-Moffatt, J. E., Xu, X., Dalbeth, N., Merriman, M. E., Topless, R., Waddell, C., … Harrison, A. A., Highton, J., … Stamp, L. K., & Merriman, T. R. (2009). Role of the urate transporter SLC2A9 gene in susceptibility to gout in New Zealand Māori, Pacific Island, and Caucasian case-control sample sets. Arthritis & Rheumatism, 60(11), 3485-3492. doi: 10.1002/art.24938

Mabbitt, P. D., Rautureau, G. J. P., Day, C. L., Wilbanks, S. M., Eaton-Rye, J. J., & Hinds, M. G. (2009). Solution structure of Psb27 from cyanobacterial photosystem II. Biochemistry, 48(37), 8771-8773. doi: 10.1021/bi901309c

Thompson, M. P., & Trayhum, P. (2009). Effect of salicylate on the expression of adipokines and glucose transporters in human adipocytes is modulated by hypoxia. Hormone & Metabolic Research, 41(8), 649-652. doi: 10.1055/s-0029-1214388

Blumenstein, M., McMaster, M. T., Black, M. A., Wu, S., Prakash, R., Cooney, J., … North, R. A. (2009). A proteomic approach identifies early pregnancy biomarkers for preeclampsia: Novel linkages between a predispositon to preeclampsia and cardiovascular disease. Proteomics, 9(11), 2929-2945. doi: 10.1002/pmic.200800625

Ledgerwood, E. C., & Morison, I. M. (2009). Targeting the apoptosome for cancer therapy. Clinical Cancer Research, 15(2), 420-424. doi: 10.1158/1078-0432.CCR-08-1172

Clarke, S. M., Cristescu, S. M., Miersch, O., Harren, F. J. M., Wasternack, C., & Muir, L. A. J. (2009). Jasmonates act with salicylic acid to confer basal thermotolerance in Arabidopsis thaliana. New Phytologist, 182(1), 175-187. doi: 10.1111/j.1469-8137.2008.02735.x

Pearce, S. H. S., & Merriman, T. R. (2009). Genetics of type 1 diabetes and autoimmune thyroid disease. Endocrinology & Metabolism Clinics of North America, 38(2), 289-301. doi: 10.1016/j.ecl.2009.01.012

Phua, S. H., Dodds, K. G., Morris, C. A., Henry, H. M., Beattie, A. E., Garmonsway, H. G., … Crawford, A. M. (2009). A genome-screen experiment to detect quantitative trait loci affecting resistance to facial eczema disease in sheep. Animal Genetics, 40(1), 73-79. doi: 10.1111/j.1365-2052.2008.01803.x

Reid, D. W., Anderson, G. J., & Lamont, I. L. (2009). Role of lung iron in determining the bacterial and host struggle in cystic fibrosis. American Journal of Physiology: Lung Cellular & Molecular Physiology, 297(5), L795-L802. doi: 10.1152/ajplung.00132.2009

Hollis-Moffatt, J. E., Merriman, M. E., Green, R. A., Rowley, K. A., Chapman, P. T., Dalbeth, N., … Harrison, A. A., Highton, J., … O'Donnell, J. L., Stamp, L. K., & Merriman, T. R. (2009). Evidence for association of an interleukin 23 receptor variant independent of the R381Q variant with rheumatoid arthritis. Annals of the Rheumatic Diseases, 68(8), 1340-1344. doi: 10.1136/ard.2008.090142

Chen, C., Krause, K., & Pettitt, B. M. (2009). Advantage of being a dimer for Serratia marcescens endonuclease. Journal of Physical Chemistry B, 113(2), 511-521. doi: 10.1021/jp8057838

Ma, L.-J., Ibrahim, A. S., Skory, C., Grabherr, M. G., Burger, G., Butler, M., … Poulter, R., … Wickes, B. L. (2009). Genomic analysis of the basal lineage fungus Rhizopus oryzae reveals a whole-genome duplication. PLoS Genetics, 5(7), e1000549. doi: 10.1371/journal.pgen.1000549

Day, R. C., Mueller, S., & Macknight, R. C. (2009). Identification of cytoskeleton-associated genes expressed during arabidopsis syncytial endosperm development. Plant Signaling & Behavior, 4(9), 883-886.

Garside, M. L., Turner, P. R., Austen, B., Strehler, E. E., Beesley, P. W., & Empson, R. M. (2009). Molecular interactions of the plasma membrane calcium ATPase 2 at pre- and post-synaptic sites in rat cerebellum. Neuroscience, 162(2), 383-395. doi: 10.1016/j.neuroscience.2009.04.059

Russell, L. K., Hurd, C. L., Nelson, W. A., & Broom, J. E. (2009). An examination of Pachymenia and Aeodes (Halymeniaceae, Rhodophyta) in New Zealand and the transfer of two species of Aeodes in South Africa to Pachymenia. Journal of Phycology, 45, 1389-1399. doi: 10.1111/j.1529-8817.2009.00761.x

Kafka, A. P., Kleffmann, T., Rades, T., & McDowell, A. (2009). Histidine residues in the peptide D-Lys⁶-GnRH: Potential for copolymerization in polymeric nanoparticles. Molecular Pharmaceutics, 6(5), 1483-1491. doi: 10.1021/mp900043e

Lamont, I. L., Konings, A. F., & Reid, D. W. (2009). Iron acquisition by Pseudomonas aeruginosa in the lungs of patients with cystic fibrosis. Biometals, 22(1), 53-60. doi: 10.1007/s10534-008-9197-9

Johnston, P. A., Timmerman-Vaughan, G., Farnden, K. J. F., & Pickering, R. (2009). Marker development and characterisation of Hordeum bulbosum introgression lines: A resource for barley improvement. Theoretical & Applied Genetics, 118(8), 1429-1437.

Kleffmann, T., Jongkees, S. A. K., Fairweather, G., Wilbanks, S. M., & Jameson, G. N. L. (2009). Mass-spectrometric characterization of two posttranslational modifications of cysteine dioxygenase. Journal of Biological Inorganic Chemistry, 14, 913-921. doi: 10.1007/s00775-009-0504-x

Shirley, M., & Lamont, I. L. (2009). Role of TonB1 in pyoverdine-mediated signaling in Pseudomonas aeruginosa. Journal of Bacteriology, 191(18), 5634-5640. doi: 10.1128/JB.00742-09

Burut-Archanai, S., Incharoensakdi, A., & Eaton-Rye, J. J. (2009). The extended N-terminal region of SphS is required for detection of external phosphate levels in Synechocystis sp. PCC 6803. Biochemical & Biophysical Research Communications, 378(3), 383-388. doi: 10.1016/j.bbrc.2008.11.012

Dearden, P. K., Duncan, E. J., & Wilson, M. J. (2009). Fixation and storage of honeybee (Apis mellifera) tissues. Cold Spring Harbor Protocols, 4(6). doi: 10.1101/pdb.prot5224

Hohmann-Marriott, M. F., & Roberson, R. W. (2009). Exploring photosynthesis by electron tomography. Photosynthesis Research, 102(2-3), 177-188. doi: 10.1007/s11120-009-9452-0

Chee Liew, L., Hecht, V., Laurie, R. E., Knowles, C. L., Vander Schoor, J. K., Macknight, R. C., & Weller, J. L. (2009). DIE NEUTRALIS and LATE BLOOMER 1 contribute to regulation of the pea circadian clock. Plant Cell, 21(10), 3198-3211. doi: 10.1105/tpc.109.067223

Jones, L. M., Waters, D. L., & Legge, M. (2009). Walking speed at self-selected exercise pace is lower but energy cost higher in older versus younger women. Journal of Physical Activity & Health, 6(3), 327-332.

Jones, G. T., Deng, M., Hammond-Tooke, G. D., McCormick, S. P. A., & van Rij, A. M. (2009). Increased plasma lipoprotein(a) found in large-artery atherosclerotic, but not small-artery occlusive, stroke [Letter to the editor]. Clinical Chemistry, 55(10), 1888-1890. doi: 10.1373/clinchem.2009.126771

Phipps-Green, A. J., Topless, R. K. G., Merriman, M. E., Dalbeth, N., Gow, P. J., Harrison, A. A., Highton, J., … Stamp, L. K., … Merriman, T. R. (2009). No evidence for association of the systemic lupus erythematosus-associated ITGAM variant, R77H, with rheumatoid arthritis in the Caucasian population [Letter to the editor]. Rheumatology, 48(12), 1614-1615. doi: 10.1093/rheumatology/kep254

Humar, B., & Guilford, P. (2009). Hereditary diffuse gastric cancer: A manifestation of lost cell polarity. Cancer Science, 100(7), 1151-1157. doi: 10.1111/j.1349-7006.2009.01163.x

Wilson, N., Baker, M., Jennings, L., Murdoch, D., Krause, K., Edwards, R., … Douwes, J., … Rice, G. (2009). A design fault in New Zealand's health research funding system exposed by pandemic influenza [Letter]. New Zealand Medical Journal, 122(1304). Retrieved from http://journal.nzma.org.nz/journal/122-1304/3839/content.pdf

Reid, D. W., O'May, C., Kirov, S. M., Roddam, L., Lamont, I. L., & Sanderson, K. (2009). Iron chelation directed against biofilms as an adjunct to conventional antibiotics [Letter to the editor]. American Journal of Physiology: Lung Cellular & Molecular Physiology, 296(5), L857-L858. doi: 10.1152/ajplung.00058.2009

Reid, D. W., O'May, C., Roddam, L. F., & Lamont, I. L. (2009). Chelated iron as an anti-Pseudomonas aeruginosa biofilm therapeutic strategy. Journal of Applied Microbiology, 106(3), 1058. doi: 10.1111/j.1365-2672.2008.03955.x

Summerfield, T. C., & Sherman, L. A. (2008). Global transcriptional response of the alkali-tolerant cyanobacterium Synechocystis sp. strain PCC 6803 to a pH 10 environment. Applied & Environmental Microbiology, 74(17), 5276-5284. doi: 10.1128/AEM.00883-08

Ross, M. F., Prime, T. A., Abakumova, I., James, A. M., Porteous, C. M., Smith, R. A. J., & Murphy, M. P. (2008). Rapid and extensive uptake and activation of hydrophobic triphenylphosphonium cations within cells. Biochemical Journal, 411(3), 633-645. doi: 10.1042/BJ20080063

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Taylor, C. J., Ireland, D. R., Ballagh, I., Bourne, K., Marechal, N. M., Turner, P. R., Bilkey, D. K., Tate, W. P., & Abraham, W. C. (2008). Endogenous secreted amyloid precursor protein-α regulates hippocampal NMDA receptor function, long-term potentiation and spatial memory. Neurobiology of Disease, 31(2), 250-260. doi: 10.1016/j.nbd.2008.04.011

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Summerfield, T. C., Eaton-Rye, J. J., & Sherman, L. A. (2007). Global gene expression of a ΔPsbO:ΔPsbU mutant and a spontaneous revertant in the cyanobacterium Synechocystis sp. strain PCC 6803. Photosynthesis Research, 94, 265-274.

Janko, K., Lecointre, G., DeVries, A., Couloux, A., Cruaud, C., & Marshall, C. (2007). Did glacial advances during the Pleistocene influence differently the demographic histories of benthic and pelagic Antarctic shelf fishes? Inferences from intraspecific mitochondrial and nuclear DNA sequence diversity. BMC Evolutionary Biology, 7, 220. doi: 10.1186/1471-2148-7-220

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Diggle, S. P., Matthijs, S., Wright, V. J., Fletcher, M. P., Chhabra, S. R., Lamont, I. L., … Williams, P. (2007). The Pseudomonas aeruginosa 4-quinolone signal molecules HHQ and PQS play multifunctional roles in quorum sensing and iron entrapment. Chemistry & Biology, 14, 87-96.

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Hong, J., Leung, E., Fraser, A. G., Merriman, T. R., Vishnu, P., & Krissansen, G. W. (2007). TLR2, TLR4 and TLR9 polymorphisms and Crohn's disease in a New Zealand caucasian cohort. Journal of Gastroenterology & Hepatology, 22, 1760-1766.

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Eaton-Rye, J. J. (2007). Celebrating Govindjee's 50 years in photosynthesis research and his 75th birthday. Photosynthesis Research, 93, 1-5.

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Swe, P. M., Heng, N. C. K., Ting, Y.-T., Baird, H. J., Carne, A., Tauch, A., Tagg, J. R., & Jack, R. W. (2007). ef1097 and ypkK encode enterococcin V583 and corynicin JK, members of a new family of antimicrobial proteins (bacteriocins) with modular structure from Gram-positive bacteria. Microbiology, 153, 3218-3227.

Chyou, D. T., Rawle, V. L., & Trotman, C. N. A. (2007). Quaternary structure of Artemia haemoglobin II: Analysis of T and C polymer alignment and interpolymer interface. BMC Structural Biology, 7, 26. doi: 10.1186/1472-6807-7-26

Visca, P., Imperi, F., & Lamont, I. L. (2007). Pyoverdine siderophores: From biogenesis to biosignificance. Trends in Microbiology, 15(1), 22-30.

Ito, M., Nishiyama, H., Kawanishi, H., Matsui, S., Guilford, P., Reeve, A., & Ogawa, O. (2007). P21-activated kinase 1: A new molecular marker for intravesical recurrence after transurethral resection of bladder cancer. Journal of Urology, 178, 1073-1079.

Matsui, S., Ito, M., Nishiyama, H., Uno, H., Kotani, H., Watanabe, J., Guilford, P., Reeve, A., … Ogawa, O. (2007). Genomic characterization of multiple clinical phenotypes of cancer using multivariate linear regression models. Bioinformatics, 23(6), 732-738.

Goodwin, T. J. D., Busby, J. N., & Poulter, R. T. M. (2007). A yeast model for target-primed (non-LTR) retrotransposition. BMC Genomics, 8, 263. doi: 10.1186/1471-2164-8-263

Fukuzawa, R., & Reeve, A. E. (2007). Molecular pathology and epidemiology of nephrogenic rests and Wilms tumors. Journal of Pediatric Hematology/Oncology, 29(9), 589-594.

Keane, O. M., Dodds, K. G., Crawford, A. M., & McEwan, J. C. (2007). Transcriptional profiling of Ovis aries identifies Ovar-DQA1 allele frequency differences between nematode-resistant and susceptible selection lines. Physiological Genomics, 30, 253-261.

Eaton-Rye, J. J. (2007). Snapshots of the Govindjee lab from the late 1960s to the late 1990s, and beyond... Photosynthesis Research, 94, 153-178.

Lin, H.-M., Chatterjee, A., Lin, Y.-H., Anjomshoaa, A., Fukuzawa, R., McCall, J. L., & Reeve, A. E. (2007). Genome wide expression profiling identifies genes associated with colorectal liver metastasis. Oncology Reports, 17(6), 1541-1549.

Kleffmann, T., von Zychlinski, A., Russenberger, D., Hirsch-Hoffmann, M., Gehrig, P., Gruissem, W., & Baginsky, S. (2007). Proteome dynamics during plastid differentiation in rice. Plant Physiology, 143, 912-923. doi: 10.1104/pp.106.090738

Lu, Y.-I., Zhao, H., & Zou, D.-h. (2007). Expression of human glandular kallikrein 2 by Pichia pastoris (yeast) and its activity assay. Reproduction & Contraception, 27(7), 433-437.

Pearl, E. J., Bokor, A. A. M., Butler, M. I., Poulter, R. T. M., & Wilbanks, S. M. (2007). Preceding hydrophobic and β-branched amino acids attenuate splicing by the CnePRP8 intein. Biochimica et Biophysica Acta: General Subjects, 1774, 995-1001. doi: 10.1016/j.bbapap.2007.05.015

Soleimanpour-Lichaei, H. R., Kühl, I., Gaisne, M., Passos, J. F., Wydro, M., Rorbach, J., … Tate, W., … Chrzanowska-Lightowlers, Z. (2007). mtRF1a is a human mitochondrial translation release factor decoding the major termination codons UAA and UAG. Molecular Cell, 27, 745-757.

Fukuzawa, R., Heathcott, R. W., More, H. E., & Reeve, A. E. (2007). Sequential WT1 and CTNNB1 mutations and alterations of β-catenin localisation in intralobar nephrogenic rests and associated Wilms tumours: Two case studies. Journal of Clinical Pathology, 60, 1013-1016.

Guilford, P., Blair, V., More, H., & Humar, B. (2007). A short guide to hereditary diffuse gastric cancer. Hereditary Cancer in Clinical Practice, 5(4), 183-194.

Weksberg, T. E., Lynch, G. C., Krause, K. L., & Pettitt, B. M. (2007). Molecular dynamics simulations of Trichomonas vaginalis ferredoxin show a loop-cap transition. Biophysical Journal, 92(10), 3337-3345.

van Stijn, T. C., French, M. C., Dodds, K. G., McEwan, J. C., Broad, T. E., Womack, J. E., … Galloway, S. M. (2007). Comparative mapping of sheep chromosome 2q. Cytogenetic & Genome Research, 116, 85-92.

Lee, M. A., Manley, T. R., Glass, B. C., Anderson, R. M., Wilson, S. J., O'Keefe, J. S., … Phua, S. H., & Tate, M. L. (2007). Distribution of prion protein genotypes in breeds of sheep in New Zealand. New Zealand Veterinary Journal, 55(5), 222-227.

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Steer, S., Abkevich, V., Gutin, A., Cordell, H. J., Gendall, K. L., Merriman, M. E., Green, R. A., Rowley, K. A., Chapman, P., … Harrison, A. A., Highton, J., … O'Donnell, J., Stamp, L., … Merriman, T. R. (2007). Genomic DNA pooling for whole-genome association scans in complex disease: Empirical demonstration of efficacy in rheumatoid arthritis. Genes & Immunity, 8, 57-68. doi: 10.1038/sj.gene.6364359

Aguilar-Rosas, R., Aguilar-Rosas, L. E., Sánchez-Rodrígue, I., Broom, J. E., & Nelson, W. A. (2007). Morfología y distribución de Porphyra hollenbergii (Bangiaceae, Rhodophyta) en la costa del Pacífico de México [Morphology and distribution of Porphyra hollenbergii (Bangiaceae, Rhodophyta) in the Pacific coast of México]. Revista Mexicana de Biodiversidad, 78, 351-357.

Legge, M., Fitzgerald, R., & Frank, N. (2007). A retrospective study of New Zealand case law involving assisted reproduction technology and the social recognition of 'new' family. Human Reproduction, 22(1), 17-25.

Roberts, R. L., Gearry, R. B., Hollis-Moffatt, J. E., Miller, A. L., Reid, J., Abkevich, V., … Merriman, T. R., Barclay, M. L., & Kennedy, M. A. (2007). IL23R R381Q and ATG16L1 T300A are strongly associated with Crohn's disease in a study of New Zealand Caucasians with inflammatory bowel disease. American Journal of Gastroenterology, 102, 2754-2761.

Easton, D. F., Pooley, K. A., Dunning, A. M., Pharoah, P. D. P., Thompson, D., Ballinger, D. G., … McCredie, M., … and also Fleming, J., Gardner, M., George, P., Reeve, T., & Robinson, B. (2007). Genome-wide association study identifies novel breast cancer susceptibility loci. Nature, 447, 1087-1095. doi: 10.1038/nature05887

Mountfort, D., Rhodes, L., Broom, J., Gladstone, M., & Tyrrell, J. (2007). Fluorescent in situ hybridisation assay as a species-specific identifier of the northern Pacific seastar, Asterias amurensis. New Zealand Journal of Marine & Freshwater Research, 41(3), 283-290. doi: 10.1080/00288330709509915

Gil, M., McKinney, C., Lee, M. K., Eells, J. B., Phyillaier, M. A., & Nikodem, V. M. (2007). Regulation of GTP cyclohydrolase I expression by orphan receptor Nurr1 in cell culture and in vivo. Journal of Neurochemistry, 101, 142-150.

Legge, M., & Fitzgerald, R. (2007). Risky knowledges: The sociocultural impacts of personal genetics in a knowledge-driven economy. New Zealand Medical Journal, 120(1262). Retrieved from http://journal.nzma.org.nz/journal/120-1262/2736/content.pdf

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Cochemé, H. M., Kelso, G. F., James, A. M., Ross, M. F., Trnka, J., Mahendiran, T., … Blaikie, F. H., Manas, A.-R. B., Porteous, C. M., Adlam, V. J., Smith, R. A. J., & Murphy, M. P. (2007). Mitochondrial targeting of quinones: Therapeutic implications. Mitochondrion, 7S, S94-S102.

Upritchard, H. G., Yang, J., Bremer, P. J., Lamont, I. L., & McQuillan, A. J. (2007). Adsorption to metal oxides of the Pseudomonas aeruginosa siderophore pyoverdine and implications for bacterial biofilm formation on metals. Langmuir, 23(13), 7189-7195.

Wirawan, R. E., Swanson, K. M., Kleffmann, T., Jack, R. W., & Tagg, J. R. (2007). Uberolysin: A novel cyclic bacteriocin produced by Streptococcus uberis. Microbiology, 153, 1619-1630.

Josephs, T., Waugh, H., Kokay, I., Grattan, D., & Thompson, M. (2007). Fasting-induced adipose factor identified as a key adipokine that is up-regulated in white adipose tissue during pregnancy and lactation in the rat. Journal of Endocrinology, 194, 305-312.

Juntarajumnong, W., Eaton-Rye, J. J., & Incharoensakdi, A. (2007). Two-component signal transduction in Synechocystis sp. PCC 6803 under phosphate limitation: Role of acetyl phosphate. Journal of Biochemistry & Molecular Biology, 40(5), 708-714.

Leung, E., Hong, J., Fraser, A. G., Merriman, T. R., Vishnu, P., & Krissansen, G. W. (2007). Colony-stimulating factor-1 receptor gene polymorphisms and Crohn's disease [Letter to the editor]. International Journal of Colorectal Disease, 22(8), 995-996.

Leung, E., Hong, J., Fraser, A. G., Merriman, T. R., Vishnu, P., & Krissansen, G. W. (2007). Peroxisome proliferator-activated receptor-γ gene polymorphisms and Crohn's disease [Letter to the editor]. International Journal of Colorectal Disease, 22(4), 453-454.

Merriman, T., & Cameron, V. (2007). Risk-taking: Behind the warrior gene story [Viewpoint]. New Zealand Medical Journal, 120(1250). Retrieved from http://journal.nzma.org.nz/journal/120-1250/2440/content.pdf

Nelson, W. A., Farr, T. J., & Broom, J. E. S. (2006). Phylogenetic relationships and generic concepts in the red order Bangiales: Challenges ahead. Phycologia, 45(3), 249-259.

Weeks, R. J., & Morison, I. M. (2006). Detailed methylation analysis of CpG islands on human chromosome region 9p21. Genes Chromosomes & Cancer, 45(4), 357-364.

Morris, C. A., Cullen, N. G., Hickey, S. M., Dobbie, P. M., Veenvliet, B. A., Manley, T. R., … Wilson, T. (2006). Genotypic effects of calpain 1 and calpastatin on the tenderness of cooked M. longissimus dorsi steaks from Jersey x Limousin, Angus and Hereford-cross cattle. Animal Genetics, 37(4), 411-414.

Leung, E., Hong, J., Fraser, A. G., Merriman, T. R., Vishnu, P., & Krissansen, G. W. (2006). Polymorphisms in the organic cation transporter genes SLC22A4 and SLC22A5 and Crohn's disease in a New Zealand Caucasian cohort. Immunology & Cell Biology, 84, 233-236.

Keane, O. M., Zadissa, A., Wilson, T., Hyndman, D. L., Greer, G. J., Baird, D. B., … Crawford, A. M., & McEwan, J. C. (2006). Gene expression profiling of Naïve sheep genetically resistant and susceptible to gastrointestinal nematodes. BMC Genomics, 7, 42. doi: 10.1186/1471-2164-7-42

Crawford, A. M., Paterson, K. A., Dodds, K. G., Diez Tascon, C., Williamson, P. A., Thomson, M. R., … McEwan, J. C. (2006). Discovery of quantitative trait loci for resistance to parasitic nematode infection in sheep: I. Analysis of outcross pedigrees. BMC Genomics, 7, 178. doi: 10.1186/1471-2164-7-178

Ackland, J. C., West, J. A., Scott, J., Zuccarello, G. C., & Broom, J. (2006). Biology of Porphyra pulchella sp. nov. from Australia and New Zealand. Algae, 21(2), 193-208.

The Honeybee Genome Sequencing Consortium, including Beggs, K. T., Mercer, A. R., Dearden, P. K., & Wilson, M. J. (2006). Insights into social insects from the genome of the honeybee Apis mellifera. Nature, 443, 931-949.

Firth, A. E., & Brown, C. M. (2006). Detecting overlapping coding sequences in virus genomes. BMC Bioinformatics, 7, 75. doi: 10.1186/1471-2105-7-75

Lamare, M. D., Barker, M. F., Lesser, M. P., & Marshall, C. (2006). DNA photorepair in echinoid embryos: Effects of temperature on repair rate in Antarctic and non-Antarctic species. Journal of Experimental Biology, 209, 5017-5028. doi: 10.1242/jeb.02598

Sabater-Muñoz, B., Legeai, F., Rispe, C., Bonhomme, J., Dearden, P., Dossat, C., … Tagu, D. (2006). Large-scale gene discovery in the pea aphid Acyrthosiphon pisum (Hemiptera). Genome Biology, 7(R21). doi: 10.1186/gb-2006-7-3-r21

Bowles, J., Knight, D., Smith, C., Wilhelm, D., Richman, J., Mamiya, S., … Wilson, M. J., … Koopman, P. (2006). Retinoid signaling determines germ cell fate in mice. Science, 312, 596-600.

Lee, M. A., Keane, O. M., Glass, B. C., Manley, T. R., Cullen, N. G., Dodds, K. G., … Schreiber, M., … Zadissa, A., Wilson, T., & McEwan, J. C. (2006). Establishment of a pipeline to analyse non-synonymous SNPs in Bos taurus. BMC Genomics, 7, 298. doi: 10.1186/1471-2164-7-298

Wilson, M. J., Bowles, J., & Koopman, P. (2006). The matricellular protein SPARC is internalized in Sertoli, Leydig, and germ cells during testis differentiation. Molecular Reproduction & Development, 73, 531-539.

Guo, Y., Lu, Y.-L., Zou, D.-h., Zhao, H., & Wang, Z.-S. (2006). Construction of recombination human zona peiiucida3/GST fusion protion gene expression vector. China Journal of Modern Medicine, 16(15), 2265-2268.

Kleffmann, T., Hirsch-Hoffmann, M., Gruissem, W., & Baginsky, S. (2006). plprot: A comprehensive proteome database for different plastid types. Plant & Cell Physiology, 47(3), 432-436.

Goodwin, T. J. D., Butler, M. I., & Poulter, R. T. M. (2006). Multiple, non-allelic, intein-coding sequences in eukaryotic RNA polymerase genes. BMC Biology, 4, 38. doi: 10.1186/1741-7007-4-38

Davis, G. H., Farquhar, P. A., O'Connell, A. R., Everett-Hincks, J. M., Wishart, P. J., Galloway, S. M., & Dodds, K. G. (2006). A putative autosomal gene increasing ovulation rate in Romney sheep. Animal Reproduction Science, 92, 65-73.

Wilson, M. J., & Lamont, I. L. (2006). Mutational analysis of an extracytoplasmic-function sigma factor to investigate its interactions with RNA polymerase and DNA. Journal of Bacteriology, 188(5), 1935-1942.

van Delft, M. F., Wei, A. H., Mason, K. D., Vandenberg, C. J., Chen, L., Czabotar, P. E., … Day, C. L., … Huang, D. C. S. (2006). The BH3 mimetic ABT-737 targets selective Bcl-2 proteins and efficiently induces apoptosis via Bak/Bax if Mcl-1 is neutralized. Cancer Cell, 10(5), 389-399.

Ross, M. F., Da Ros, T., Blaikie, F. H., Prime, T. A., Porteous, C. M., Severina, I. I., … Kjaergaard, H. G., Smith, R. A. J., & Murphy, M. P. (2006). Accumulation of lipophilic dications by mitochondria and cells. Biochemical Journal, 400, 199-208.

Slatter, T. L., Williams, M. J. A., Frikke-Schmidt, R., Tybjærg-Hansen, A., Morison, I. M., & McCormick, S. P. A. (2006). Promoter haplotype of a new ABCA1 mutant influences expression of familial hypoalphalipoproteinemia. Atherosclerosis, 187, 393-400.

Pearce, S. H. S., & Merriman, T. R. (2006). Genetic progress towards the molecular basis of autoimmunity. Trends in Molecular Medicine, 12(2), 90-98.

Zou, D.-h., Zhang, J.-Y., Guo, Y., Lu, Y.-L., Zuo, W.-J., & Wang, Z.-S. (2006). Construction and expression of recombinant human prostate-specific antigen expression vector pPICZα-mPSA. China Journal of Modern Medicine, 16(10), 1441-1444.

Jacobs, G. H., Stockwell, P. A., Tate, W. P., & Brown, C. M. (2006). Transterm: Extended search facilities and improved integration with other databases. Nucleic Acids Research, 34(Database), D37-D40.

Dearden, P. K. (2006). Germ cell development in the Honeybee (Apis mellifera); Vasa and Nanos expression. BMC Developmental Biology, 6, 6. doi: 10.1186/1471-213X-6-6

Chung, B. Y. W., Simons, C., Firth, A. E., Brown, C. M., & Hellens, R. P. (2006). Effect of 5'UTR introns on gene expression in Arabidopsis thaliana. BMC Genomics, 7, 120. doi: 10.1186/1471-2164-7-120

Breslow, N. E., Beckwith, J. B., Perlman, E. J., & Reeve, A. E. (2006). Age distributions, birth weights, nephrogenic rests, and heterogeneity in the pathogenesis of Wilms Tumor. Pediatric Blood & Cancer, 47, 260-267.

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