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Otago Biochemistry publications: journal articles

Bernhardt, H. S., & Tate, W. P. (2021). A new perspective on the Maillard reaction and the origin of life. Journal of Molecular Evolution. Advance online publication. doi: 10.1007/s00239-021-10030-4

Bhandari, B. K., Lim, C. S., Remus, D. M., Chen, A., van Dolleweerd, C., & Gardner, P. P. (2021). Analysis of 11,430 recombinant protein production experiments reveals that protein yield is tunable by synonymous codon changes of translation initiation sites. PLoS Computational Biology, 17(10), e1009461. doi: 10.1371/journal.pcbi.1009461

Rana, Z., Diermeier, S., Walsh, F. P., Hanif, M., Hartinger, C. G., & Rosengren, R. J. (2021). Anti-proliferative, anti-angiogenic and safety profiles of novel HDAC inhibitors for the treatment of metastatic castration-resistant prostate cancer. Pharmaceuticals, 14, 1020. doi: 10.3390/ph14101020

Petersen, G. E. L., Fennessy, P. F., & Dearden, P. K. (2021). Management tools for genetic diversity in an isolated population of the honeybee (Apis mellifera) in New Zealand. Animal Production Science. Advance online publication. doi: 10.1071/An21102

McCulloch, G. A., Guhlin, J., Dutoit, L., Harrop, T. W. R., Dearden, P. K., & Waters, J. M. (2021). Genomic signatures of parallel alpine adaptation in recently-evolved flightless insects. Molecular Ecology. Advance online publication. doi: 10.1111/mec.16204

Pinkney, H. R., Black, M. A., & Diermeier, S. D. (2021). Single-cell RNA-seq reveals heterogeneous lncRNA expression in xenografted triple-negative breast cancer cells. Biology, 10(10), 987. doi: 10.3390/biology10100987

Basak, I., Hansen, R. A., Ward, M. E., & Hughes, S. M. (2021). Deficiency of the lysosomal protein CLN5 alters lysosomal function and movement. Biomolecules, 11, 1412. doi: 10.3390/biom11101412

Kumar, M., Padala, P., Fahoum, J., Hassouna, F., Tsaban, T., Zoltsman, G., … Wiener, R. (2021). Structural basis for UFM1 transfer from UBA5 to UFC1. Nature Communications, 12, 5708. doi: 10.1038/s41467-021-25994-6

Hazlett, J., Niemi, V., Aiderus, A., Powell, K., Wise, L., Kemp, R., & Dunbier, A. K. (2021). Oestrogen deprivation induces chemokine production and immune cell recruitment in in vitro and in vivo models of oestrogen receptor-positive breast cancer. Breast Cancer Research, 23, 95. doi: 10.1186/s13058-021-01472-1

Ran, Z., Xue, X., Han, L., Terkeltaub, R., Merriman, T. R., Zhao, T., … Li, C. (2021). Decrease in serum urate level is associated with loss of visceral fat in male gout patients. Frontiers in Endocrinology, 12, 724822. doi: 10.3389/fendo.2021.724822

Campbell, A. C., Tanner, J. J., & Krause, K. L. (2021). Optimisation of neuraminidase expression for use in drug discovery by using HEK293-6E cells. Viruses, 13, 1893. doi: 10.3390/v13101893

Torbati, E., Krause, K. L., & Ussher, J. E. (2021). The immune response to SARS-CoV-2 and variants of concern. Viruses, 13, 1911. doi: 10.3390/v13101911

Barnett, S. C., Parr-Brownlie, L. C., Perry, B. A. L., Young, C. K., Wicky, H. E., Hughes, S. M., McNaughton, N., & Dalrymple-Alford, J. C. (2021). Anterior thalamic nuclei neurons sustain memory. Current Research in Neurobiology. Advance online publication. doi: 10.1016/j.crneur.2021.100022

Dussex, N., van der Valk, T., Morales, H. E., Wheat, C. W., Díez-del-Molino, D., von Seth, J., Foster, Y., … Le Lec, M. F. (2021). Population genomics of the critically endangered kākāpō. Cell Genomics. Advance online publication. doi: 10.1016/j.xgen.2021.100002

Burgess, A. E., Kleffmann, T., & Mace, P. D. (2021). Oncogenic truncations of ASXL1 enhance a motif for BRD4 ET-domain binding. Journal of Molecular Biology, 433, 167242. doi: 10.1016/j.jmb.2021.167242

Badart, M. P., Barnes, E. M., Cording, A. P., Gilmer, S. C. L., Billinghurst, I. D., Edupuganti, V. V. S. R., … Bland, A. R., Bower, R. L., Rana, Z., Ferguson, S. A., Opel Reading, H. K., Cook, G. M., Rosengren, R. J., Krause, K. L., Gamble, A. B., Ashton, J. C., & Hawkins, B. C. (2021). Synthesis and biological evaluation of (-) and (+)-spiroleucettadine and analogues. ChemMedChem, 16, 1308-1315. doi: 10.1002/cmdc.202000954

Safarian, S., Opel-Reading, H. K., Wu, D., Mehdipour, A. R., Hards, K., Harold, L. K., … Stewart, I., … Cook, G. M., Krause, K. L., & Michel, H. (2021). The cryo-EM structure of the bd oxidase from M. tuberculosis reveals a unique structural framework and enables rational drug design to combat TB. Nature Communications, 12(1), 5236. doi: 10.1038/s41467-021-25537-z

Burden, H. J., Adams, S., Kulatea, B., Wright-McNaughton, M. E., Sword, D., Ormsbee, J. J., … Merriman, T. R., … Krebs, J. D., Hall, R. M., … Merry, T. L. (2021). The CREBRF diabetes-protective rs373863828-A allele is associated with enhanced early insulin release in men of Māori and Pacific ancestry. Diabetologia. Advance online publication. doi: 10.1007/s00125-021-05552-x

Aiderus, A., Newberg, J. Y., Guzman-Rojas, L., Contreras-Sandoval, A. M., Meshey, A. L., Jones, D. J., … Black, M. A., … Mann, M. B. (2021). Transposon mutagenesis identifies cooperating genetic drivers during keratinocyte transformation and cutaneous squamous cell carcinoma progression. PLoS Genetics, 17(8), e1009094. doi: 10.1371/journal.pgen.1009094

Middleton, A. J., Teyra, J., Zhu, J., Sidhu, S. S., & Day, C. L. (2021). Identification of ubiquitin variants that inhibit the E2 ubiquitin conjugating enzyme, Ube2k. ACS Chemical Biology. Advance online publication. doi: 10.1021/acschembio.1c00445

Mandal, A. K., Leask, M. P., Estiverne, C., Choi, H. K., Merriman, T. R., & Mount, D. B. (2021). Genetic and physiological effects of insulin on human urate homeostasis. Frontiers in Physiology, 12, 713710. doi: 10.3389/fphys.2021.713710

Wold, J., Koepfli, K.-P., Galla, S. J., Eccles, D., Hogg, C. J., Le Lec, M. F., Guhlin, J., Santure, A. W., & Steeves, T. E. (2021). Expanding the conservation genomics toolbox: Incorporating structural variants to enhance genomic studies for species of conservation concern. Molecular Ecology. Advance online publication. doi: 10.1111/mec.16141

Ha, M., Bekhit, A. E.-D., McConnell, M., & Carne, A. (2021). A simple method for enrichment of β-lactoglobulin from bovine milk whey involving selective hydrolysis by two fungal protease preparations. Food Chemistry. Advance online publication. doi: 10.1016/j.foodchem.2021.130820

Leask, M., Lovegrove, M., Romeril, A., Duncan, E., & Dearden, P. (2021). Evolution and genomic organization of the insect sHSP gene cluster and coordinate regulation in phenotypic plasticity. BMC Ecology & Evolution, 21, 154. doi: 10.1186/s12862-021-01885-8

Smith, L. M., Jackson, S. A., Gardner, P. P., & Fineran, P. C. (2021). SorTn-seq: A high-throughput functional genomics approach to discovering regulators of bacterial gene expression. Nature Protocols. Advance online publication. doi: 10.1038/s41596-021-00582-6

Badii, M., Gaal, O. I., Cleophas, M. C., Klück, V., Davar, R., Habibi, E., … Stamp, L. K., … Phipps-Green, A. J., … Merriman, T. R., … Joosten, L. A. B. (2021). Urate-induced epigenetic modifications in myeloid cells. Arthritis Research & Therapy, 23, 202. doi: 10.1186/s13075-021-02580-1

Seo, S., Sizemore, R. J., Reader, K. L., Smither, R. A., Wicky, H. E., Hughes, S. M., Bilkey, D. K., Parr-Brownlie, L. C., & Oorschot, D. E. (2021). A schizophrenia risk factor induces marked anatomical deficits at GABAergic-dopaminergic synapses in the rat ventral tegmental area: Essential evidence for new targeted therapies. Journal of Comparative Neurology. Advance online publication. doi: 10.1002/cne.25225

Panthi, S., Lyons, N. M. A., & Leitch, B. (2021). Impact of dysfunctional feed-forward inhibition on glutamate decarboxylase isoforms and γ-aminobutyric acid transporters. International Journal of Molecular Sciences, 22(14), 7740. doi: 10.3390/ijms22147740

Pechmann, M., Kenny, N. J., Pott, L., Heger, P., Chen, Y.-T., Buchta, T., … Roth, S. (2021). Striking parallels between dorsoventral patterning in Drosophila and Gryllus reveal a complex evolutionary history behind a model gene regulatory network. eLIFE, 10, e68287. doi: 10.7554/eLife.68287

Calcino, A. D., Kenny, N. J., & Gerdol, M. (2021). Single individual structural variant detection uncovers widespread hemizygosity in molluscs. Philosophical Transactions of the Royal Society B, 376, 20200153. doi: 10.1098/rstb.2020.0153

Riesgo, A., Taboada, S., Kenny, N. J., Santodomingo, N., Moles, J., Leiva, C., … Maldonado, M. (2021). Recycling resources: Silica of diatom frustules as a source for spicule building in Antarctic siliceous demosponges. Zoological Journal of the Linnean Society, 192(2), 259-276. doi: 10.1093/zoolinnean/zlaa058

Kenny, N. J., & Itskovich, V. B. (2021). Phylogenomic inference of the interrelationships of Lake Baikal sponges. Systematics & Biodiversity, 19(2), 209-217. doi: 10.1080/14772000.2020.1827077

Plese, B., Kenny, N. J., Rossi, M. E., Cárdenas, P., Schuster, A., Taboada, S., … Riesgo, A. (2021). Mitochondrial evolution in the Demospongiae (Porifera): Phylogeny, divergence time, and genome biology. Molecular Phylogenetics & Evolution, 155, 107011. doi: 10.1016/j.ympev.2020.107011

García-Castro, H., Kenny, N. J., Iglesias, M., Álvarez-Campos, P., Mason, V., Elek, A., … Solana, J. (2021). ACME dissociation: A versatile cell fixation-dissociation method for single-cell transcriptomics. Genome Biology, 22, 89. doi: 10.1186/s13059-021-02302-5

Te Morenga, L., Kruimer, D., McLean, R., Sabadel, A. J. M., Van Hale, R., Tatin, X., … Mann, J., & Merriman, T. (2021). Associations between sugars intakes and urinary sugars excretion and carbon stable isotope ratios in red blood cells as biomarkers of sugars intake in a predominantly Māori population. Frontiers in Nutrition, 8, 637267. doi: 10.3389/fnut.2021.637267

Ahmmed, M. K., Carne, A., Bunga, S., Tian, H. S., & Bekhit, A. E.-D. A. (2021). Lipidomic signature of Pacific lean fish species head and skin using gas chromatography and nuclear magnetic resonance spectroscopy. Food Chemistry, 365, 130637. doi: 10.1016/j.foodchem.2021.130637

Choo, P., Forsman, J. A., Hui, L., Khaing, E. P., Summerfield, T. C., & Eaton-Rye, J. J. (2021). The PsbJ protein is required for photosystem II activity in centers lacking the PsbO and PsbV lumenal subunits. Photosynthesis Research. Advance online publication. doi: 10.1007/s11120-021-00862-y

Wiggins, G. A. R., Black, M. A., Dunbier, A., Morley-Bunker, A. E., kConFab Investigators, Pearson, J. F., & Walker, L. C. (2021). Increased gene expression variability in BRCA1-associated and basal-like breast tumours. Breast Cancer Research & Treatment. Advance online publication. doi: 10.1007/s10549-021-06328-y

Lin, W., Farella, M., Antoun, J. S., Topless, R. K., Merriman, T. R., & Michelotti, A. (2021). Factors associated with orthodontic pain. Journal of Oral Rehabilitation. Advance online publication. doi: 10.1111/joor.13227

Ji, A., Shaukat, A., Takei, R., Bixley, M., Cadzow, M., Topless, R. K., Major, T. J., Phipps-Green, A., Merriman, M. E., … Stamp, L. K., Dalbeth, N., … Merriman, T. R. (2021). Aotearoa New Zealand Māori and Pacific population-specific gout risk variants: CLNK is a separate risk gene at the SLC2A9 locus. Journal of Rheumatology. Advance online publication. doi: 10.3899/jrheum.201684

Hwang, J., Strange, N., Phillips, M. J. A., Krause, A. L., Heywood, A., Gamble, A. B., … Tyndall, J. D. A. (2021). Optimization of peptide-based inhibitors targeting the HtrA serine protease in Chlamydia: Design, synthesis and biological evaluation of pyridone-based and N-Capping group-modified analogues. European Journal of Medicinal Chemistry, 224(113692). doi: 10.1016/j.ejmech.2021.113692

Gao, Q., Cheng, X., Merriman, T. R., Wang, C., Cui, L., Zhang, H., … Lu, J. (2021). Manifestations de la goutte chez 9754 patients d’un centre clinique chinois: étude observationnelle sur 10 ans. Revue du Rhumatisme. Advance online publication. doi: 10.1016/j.rhum.2021.07.002

McCartney, A. M., Hilario, E., Choi, S.-S., Guhlin, J., Prebble, J. M., Houliston, G., … Chagné, D. (2021). An exploration of assembly strategies and quality metrics on the accuracy of the rewarewa (Knightia excelsa) genome. Molecular Ecology Resources, 21, 2125-2144. doi: 10.1111/1755-0998.13406

Colantonio, L. D., Reynolds, R. J., Merriman, T. R., Gaffo, A., Singh, J. A., Plante, T. B., … Irvin, M. R. (2021). Higher serum urate levels are associated with an increased risk for sudden cardiac death. Journal of Rheumatology. Advance online publication. doi: 10.3899/jrheum.210139

Takei, R., Sumpter, N. A., Phipps-Green, A., Cadzow, M., Topless, R. K., Reynolds, R. J., & Merriman, T. R. (2021). Correspondence on 'Variants in urate transporters, ADH1B, GCKR and MEPE genes associated with transition from asymptomatic hyperuricaemia to gout: Results of the first gout versus asymptomatic hyperuricaemia GWAS in Caucasians using data from the UK Biobank'. Annals of the Rheumatic Diseases. Advance online publication. doi: 10.1136/annrheumdis-2021-220769

Patel, S. G., Buchanan, C. M., Mulroy, E., Simpson, M., Reid, H. A., Drake, K., Merriman, M. E., Phipps-Green, A., Cadzow, M., Merriman, T. R., … Roxburgh, R. H. (2021). Potential PINK1 founder effect in Polynesia causing early-onset Parkinson's disease. Movement Disorders. Advance online publication. doi: 10.1002/mds.28665

Madani, G., Lamping, E., Lee, H. J., Niimi, M., Mitra, A. K., & Cannon, R. D. (2021). Small-scale plasma membrane preparation for the analysis of Candida albicans Cdr1-mGFPHis. Journal of Visualized Experiments, 172, e62592. doi: 10.3791/62592

Wang, Y., Morton, J. D., Bekhit, A. E.-D. A., Carne, A., & Mason, S. L. (2021). Amino acid sequences of lactoferrin from red deer (Cervus elaphus) milk and antimicrobial activity of its derived peptides lactoferricin and lactoferrampin. Foods, 10(6), 1305. doi: 10.3390/foods10061305

Brownfield, L. (2021). Plant breeding: Revealing the secrets of cytoplasmic male sterility in wheat [Dispatch]. Current Biology, 31(11), R724-R726. doi: 10.1016/j.cub.2021.04.026

Ahmmed, M. K., Carne, A., Ahmmed, F., Stewart, I., Tian, H., & Bekhit, A. E.-D. A. (2021). Positional distribution of fatty acids and phospholipid composition in King salmon (Oncorhynchus tshawytscha) head, roe and skin using nuclear magnetic resonance spectroscopy. Food Chemistry, 363, 130302. doi: 10.1016/j.foodchem.2021.130302

Sunde, H., Ryder, K., Bekhit, A. E.-D. A., & Carne, A. (2021). Analysis of peptides in a sheep beta lactoglobulin hydrolysate as a model to evaluate the effect of peptide amino acid sequence on bioactivity. Food Chemistry. Advance online publication. doi: 10.1016/j.foodchem.2021.130346

Forsman, J. A., & Eaton-Rye, J. J. (2021). The hydrophobicity of mutations targeting D1:Val219 modifies formate and diuron binding in the quinone-Fe-acceptor complex of Photosystem II. Physiologia Plantarum. Advance online publication. doi: 10.1111/ppl.13469

Timaxian, C., Vogel, C. F. A., Orcel, C., Vetter, D., Durochat, C., Chinal, C., … Diermeier, S. D., … Lazennec, G. (2021). Pivotal role for Cxcr2 in regulating tumor-associated neutrophil in breast cancer. Cancers, 13(11), 2584. doi: 10.3390/cancers13112584

Almomani, S. N., Alsaleh, A. A., Weeks, R. J., Chatterjee, A., Day, R. C., Honda, I., … Fukuzawa, R., Slatter, T. L., Hung, N. A., Devenish, C., Morison, I. M., & Macaulay, E. C. (2021). Identification and validation of DNA methylation changes in pre-eclampsia. Placenta, 110, 16-23. doi: 10.1016/j.placenta.2021.05.005

McCormick, N., O'Connor, M. J., Yokose, C., Merriman, T. R., Mount, D. B., Leong, A., & Choi, H. K. (2021). Assessing the causal relationships between insulin resistance and hyperuricemia and gout using bidirectional Mendelian randomization. Arthritis & Rheumatology. Advance online publication. doi: 10.1002/art.41779

Sitter, T. L., Vaughan, A. L., Schoof, M., Jackson, S. A., Glare, T. R., Cox, M. P., Fineran, P. C., Gardner, P. P., & Hurst, M. R. H. (2021). Evolution of virulence in a novel family of transmissible mega-plasmids. Environmental Microbiology. Advance online publication. doi: 10.1111/1462-2920.15595

Chyou, T.-y., & Nishtala, P. S. (2021). Identifying frequent drug combinations associated with delirium in older adults: application of association rules method to a case-time-control design. Pharmacoepidemiology & Drug Safety. Advance online publication. doi: 10.1002/pds.5292

Buchka, S., Hapfelmeier, A., Gardner, P. P., Wilson, R., & Boulesteix, A. (2021). On the optimistic performance evaluation of newly introduced bioinformatic methods [Short report]. Genome Biology, 22(1). doi: 10.1186/s13059-021-02365-4

Barzak, F. M., Ryan, T. M., Kvach, M. V., Kurup, H. M., Aihara, H., Harris, R. S., … Jameson, G. B. (2021). Small-angle x-ray scattering models of APOBEC3B catalytic domain in a complex with a single-stranded DNA inhibitor. Viruses, 13(2), 290. doi: 10.3390/v13020290

Nair, B. B., Khant Aung, Z., Porteous, R., Prescott, M., Glendining, K. A., Jenkins, D. E., Augustine, R. A., … Yip, S. H., Bouwer, G. T., Brown, C. H., Jasoni, C. L., Campbell, R. E., Bunn, S. J., Anderson, G. M., Grattan, D. R., Herbison, A. E., & Iremonger, K. J. (2021). Impact of chronic variable stress on neuroendocrine hypothalamus and pituitary in male and female C57BL/6J mice. Journal of Neuroendocrinology. Advance online publication. doi: 10.1111/jne.12972

Murugayah, S. A., Evans, G. B., Tyndall, J. D. A., & Gerth, M. L. (2021). A single point mutation converts a glutaryl-7-aminocephalosporanic acid acylase into an N-acyl-homoserine lactone acylase. Biotechnology Letters. Advance online publication. doi: 10.1007/s10529-021-03135-9

Zhang, H., Li, H., Phipps Green, A., Wang, M., Yan, F., Li, M., … Merriman, T. R., & Li, C. (2021). Association of low-level environmental exposure to cadmium and lead with gout flare using a cohort study design. Chemosphere, 280, 130648. doi: 10.1016/j.chemosphere.2021.130648

Mace, P. D., & Murphy, J. M. (2021). There’s more to death than life: Non-catalytic functions in kinase and pseudokinase signaling. Journal of Biological Chemistry. Advance online publication. doi: 10.1016/j.jbc.2021.100705

Bunga, S., Ahmmed, M. K., Carne, A., & Bekhit, A. E.-D. A. (2021). Effect of salted-drying on bioactive compounds and microbiological changes during the processing of karasumi-like Chinook salmon (Oncorhynchus tshawytscha) roe product. Food Chemistry, 357, 129780. doi: 10.1016/j.foodchem.2021.129780

Livingstone, R. W., Elder, M. K., Singh, A., Westlake, C. M., Tate, W. P., Abraham, W. C., & Williams, J. M. (2021). Secreted amyloid precursor protein-alpha enhances LTP through the synthesis and trafficking of Ca2+-permeable AMPA receptors. Frontiers in Molecular Neuroscience, 14, 660208. doi: 10.3389/fnmol.2021.660208

Rehman, A., Jeukens, J., Levesque, R. C., & Lamont, I. L. (2021). Gene-gene interactions dictate ciprofloxacin resistance in Pseudomonas aeruginosa and facilitate prediction of resistance phenotype from genome sequence data. Antimicrobial Agents & Chemotherapy. Advance online publication. doi: 10.1128/aac.02696-20

Topless, R. K., Phipps-Green, A., Leask, M., Dalbeth, N., Stamp, L. K., Robinson, P. C., & Merriman, T. R. (2021). Gout, rheumatoid arthritis, and the risk of death related to coronavirus disease 2019: An analysis of the UK Biobank. ACR Open Rheumatology. Advance online publication. doi: 10.1002/acr2.11252

Basak, I., Wicky, H. E., McDonald, K. O., Xu, J. B., Palmer, J. E., Best, H. L., … Schoderboeck, L., & Hughes, S. M. (2021). A lysosomal enigma CLN5 and its significance in understanding neuronal ceroid lipofuscinosis. Cellular & Molecular Life Sciences. Advance online publication. doi: 10.1007/s00018-021-03813-x

Dixon, K., Brew, T., Farnell, D., Godwin, T. D., Cheung, S., Chow, C., … Guilford, P. (2021). Modelling hereditary diffuse gastric cancer initiation using transgenic mouse-derived gastric organoids and single-cell sequencing. Journal of Pathology. Advance online publication. doi: 10.1002/path.5675

Dunstan-Harrison, C., Morison, I. M., & Ledgerwood, E. C. (2021). A novel frameshift GP1BB mutation causes autosomal dominant macrothrombocytopenia with decreased vWF receptor expression but normal platelet aggregation. Platelets. Advance online publication. doi: 10.1080/09537104.2021.1909716

Wiggins, G. A. R., Black, M. A., Dunbier, A., Merriman, T. R., Pearson, J. F., & Walker, L. C. (2021). Variable expression quantitative trait loci analysis of breast cancer risk variants. Scientific Reports, 11(1), 7192. doi: 10.1038/s41598-021-86690-5

Lim, C. S., Weinstein, B. N., Roy, S. W., & Brown, C. M. (2021). Analysis of fungal genomes reveals commonalities of intron gain or loss and functions in intron-poor species. Molecular Biology & Evolution. Advance online publication. doi: 10.1093/molbev/msab094

Xiong, H., Veedu, R. N., & Diermeier, S. D. (2021). Recent advances in oligonucleotide therapeutics in oncology. International Journal of Molecular Sciences, 22(7), 3295. doi: 10.3390/ijms22073295

Shen, X., Wang, C., Liang, N., Liu, Z., Li, X., Zhu, Z.-J., … Merriman, T. R., … Yin, H. (2021). Serum metabolomics identifies dysregulated pathways and potential metabolic biomarkers for hyperuricemia and gout. Arthritis & Rheumatology. Advance online publication. doi: 10.1002/art.41733

Herridge, R., Samarth, Brownfield, L., & Macknight, R. (2021). Identification and characterization of perennial ryegrass (Lolium perenne) vernalization genes. Frontiers in Plant Science, 12, 640324. doi: 10.3389/fpls.2021.640324

Daniloski, D., Petkoska, A. T., Lee, N. A., Bekhit, A. E.-D., Carne, A., & Vaskoska, R. (2021). Active edible packaging based on milk proteins: A route to carry and deliver nutraceuticals. Trends in Food Science & Technology. Advance online publication. doi: 10.1016/j.tifs.2021.03.024

Bhandari, B. K., Lim, C. S., & Gardner, P. P. (2021). Web services for improving recombinant protein production. Nucleic Acids Research. Advance online publication. doi: 10.1093/nar/gkab175

Moore, M. P., Lamont, I. L., Williams, D., Paterson, S., Kukavica-Ibrulj, I., Tucker, N. P., … Winstanley, C. (2021). Transmission, adaptation and geographical spread of the Pseudomonas aeruginosa Liverpool epidemic strain. Microbial Genomics. Advance online publication. doi: 10.1099/mgen.0.000511

Li, X., Sun, W., Lu, J., He, Y., Chen, Y., Ren, W., … Merriman, T. R., & Li, C. (2021). Effects of fenofibrate therapy on renal function in primary gout patients. Rheumatology. Advance online publication. doi: 10.1093/rheumatology/keab231

Ahmmed, M. K., Ahmmed, F., Stewart, I., Carne, A., Tian, H., & Bekhit, A. E.-D. A. (2021). Omega-3 phospholipids in Pacific blue mackerel (Scomber australasicus) processing by-products. Food Chemistry, 353, 129451. doi: 10.1016/j.foodchem.2021.129451

Knapp, K. M., Jenkins, D. E., Sullivan, R., Harms, F. L., von Elsner, L., Ockeloen, C. W., … Bicknell, L. S. (2021). MCM complex members MCM3 and MCM7 are associated with a phenotypic spectrum from Meier-Gorlin syndrome to lipodystrophy and adrenal insufficiency. European Journal of Human Genetics. Advance online publication. doi: 10.1038/s41431-021-00839-4

Philem, P., Kleffmann, T., Gai, S., Hawkins, B. C., Wilbanks, S. M., & Lamont, I. L. (2021). Identification of active site residues of the siderophore synthesis enzyme PvdF and evidence for interaction of PvdF with a substrate-providing enzyme. International Journal of Molecular Sciences, 22(4), 2211. doi: 10.3390/ijms22042211

Topless, R. K. G., Major, T. J., Florez, J. C., Hirschhorn, J. N., Cadzow, M., Dalbeth, N., Stamp, L. K., Wilcox, P. L., … Merriman, T. R. (2021). The comparative effect of exposure to various risk factors on the risk of hyperuricaemia: Diet has a weak causal effect. Arthritis Research & Therapy, 23(1), 75. doi: 10.1186/s13075-021-02444-8

Klionsky, D. J., Abdel-Aziz, A. K., Abdelfatah, S., Abdellatif, M., Abdoli, A., Abel, S., … Hughes, S. M., … Katare, R. G., … Tong, C.-K. (2021). Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition). Autophagy. Advance online publication. doi: 10.1080/15548627.2020.1797280

Reynolds, R. J., Irvin, M. R., Bridges, S. L., Kim, H., Merriman, T. R., Arnett, D. K., … Vazquez, A. I. (2021). Genetic correlations between traits associated with hyperuricemia, gout, and comorbidities. European Journal of Human Genetics. Advance online publication. doi: 10.1038/s41431-021-00830-z

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Goodman, L., Cree, L., Jones, G., Legge, M., Shelling, A., & Farquhar, C. (2018). The futility of fertility research? Barriers to embryo research in New Zealand. New Zealand Medical Journal, 131(1477), 63-70. Retrieved from

Greig, K., Gosling, A., Collins, C. J., Boocock, J., McDonald, K., Addison, D. J., … Higham, C. F. W., … Walter, R., & Matisoo-Smith, E. (2018). Complex history of dog (Canis familiaris) origins and translocations in the Pacific revealed by ancient mitogenomes. Scientific Reports, 8, 9130. doi: 10.1038/s41598-018-27363-8

Wu, R., Wang, T., Allan, A. C., Macknight, R. C., & Varkonyi-Gasic, E. (2018). Overexpression of both AcSVP1 and AcSVP4 delays budbreak in kiwifruit A. chinensis var. deliciosa, but only AcSVP1 delays flowering in model plants. Environmental & Experimental Botany, 153, 262-270. doi: 10.1016/j.envexpbot.2018.06.010

Brewster, J., Garama, D., Lamare, M., & Carne, A. (2018). Carotenoid composition of a New Zealand (Evechinus chloroticus) and an Australian (Heliocidaris erythrogramma) sea urchin in relation to gonad colour. Aquaculture Research, 49(8), 2751-2762. doi: 10.1111/are.13736

Merriman, T. R., & Wilcox, P. L. (2018). Cardio-metabolic disease genetic risk factors among Māori and Pacific Island people in Aotearoa New Zealand: Current state of knowledge and future directions. Annals of Human Biology, 45(3), 202-214. doi: 10.1080/03014460.2018.1461929

Matisoo-Smith, E., & Gosling, A. L. (2018). Walking backwards into the future: The need for a holistic evolutionary approach in Pacific health research. Annals of Human Biology, 45(3), 175-187. doi: 10.1080/03014460.2018.1448889

Ohline, S. M., Wake, K. L., Hawkridge, M.-V., Dinnunhan, M. F., Hegemann, R. U., Wilson, A., Schoderboeck, L., Logan, B. J., … Hughes, S. M., & Abraham, W. C. (2018). Adult-born dentate granule cell excitability depends on the interaction of neuron age, ontogenetic age and experience. Brain Structure & Function, 223(7), 3213-3228. doi: 10.1007/s00429-018-1685-2

Newberg, J. Y., Black, M. A., Jenkins, N. A., Copeland, N. G., Mann, K. M., & Mann, M. B. (2018). SB Driver Analysis: A Sleeping Beauty cancer driver analysis framework for identifying and prioritizing experimentally actionable oncogenes and tumor suppressors. Nucleic Acids Research, 45(16), e94. doi: 10.1093/nar/gky450

Dickie, I. A., Boyer, S., Buckley, H., Duncan, R. P., Gardner, P., Hogg, I. D., … Morales, S. E., … Weaver, L. (2018). Towards robust and repeatable sampling methods in eDNA based studies. Molecular Ecology Resources, 18(5), 940-952. doi: 10.1111/1755-0998.12907

Poynton, H. C., Hasenbein, S., Benoit, J. B., Sepulveda, M., Poelchau, M. F., Hughes, D. S. T., … Cridge, A. G., … Richards, S. (2018). The toxicogenome of Hyalella azteca: A model for sediment ecotoxicology and evolutionary toxicology. Environmental Science & Technology, 52(10), 6009-6022. doi: 10.1021/acs.est.8b00837

Lacey, C. J., Doudney, K., Bridgman, P. G., George, P. M., Mulder, R. T., Zarifeh, J. J., Kimber, B., Cadzow, M. J., Black, M. A., Merriman, T. R., … Pearson, J. F., Cameron, V. A., & Kennedy, M. A. (2018). Copy number variants implicate cardiac function and development pathways in earthquake-induced stress cardiomyopathy. Scientific Reports, 8, 7548. doi: 10.1038/s41598-018-25827-5

Merriman, T. R. (2018). Application of genetic epidemiology to CETP (Cholesteryl Ester Transfer Protein) concentration and risk of cardiovascular disease. Circulation: Genomic & Precision Medicine, 11(5), e002138. doi: 10.1161/circgen.118.002138

Major, T. J., Dalbeth, N., Stahl, E. A., & Merriman, T. R. (2018). An update on the genetics of hyperuricaemia and gout. Nature Reviews Rheumatology, 14, 341-353. doi: 10.1038/s41584-018-0004-x

Taylor, E. S., McCall, J. L., Shen, S., Girardin, A., Munro, F. M., Black, M. A., Ward-Hartstonge, K. A., & Kemp, R. A. (2018). Prognostic roles for IL-2-producing and CD69+ T cell subsets in colorectal cancer patients. International Journal of Cancer, 143(8), 2008-2016. doi: 10.1002/ijc.31598

Fudge, J. B., Lee, R. H., Laurie, R. E., Mysore, K. S., Wen, J., Weller, J. L., & Macknight, R. C. (2018). Medicago truncatula SOC1 genes are up-regulated by environmental cues that promote flowering. Frontiers in Plant Science, 9, 496. doi: 10.3389/fpls.2018.00496

Sew Hoy, W., Antoun, J., Lin, W., Chandler, N., Merriman, T., & Farella, M. (2018). Ecological momentary assessment of pain in adolescents undergoing orthodontic treatment using a smartphone app. Seminars in Orthodontics, 24(2), 209-216. doi: 10.1053/j.sodo.2018.04.002

Wheeler, N. E., Gardner, P. P., & Barquist, L. (2018). Machine learning identifies signatures of host adaptation in the bacterial pathogen Salmonella enterica. PLoS Genetics, 14(5), e1007333. doi: 10.1371/journal.pgen.1007333

Krishnan, M., Major, T. J., Topless, R. K., Dewes, O., Yu, L., Thompson, J. M. D., … Stamp, L. K., … Wilcox, P., Grattan, D., … Merriman, T. R. (2018). Discordant association of the CREBRF rs373863828 A allele with increased BMI and protection from type 2 diabetes in Māori and Pacific (Polynesian) people living in Aotearoa/New Zealand. Diabetologia, 61(7), 1603-1613. doi: 10.1007/s00125-018-4623-1

Sun, M., Vazquez, A. I., Reynolds, R. J., Singh, J. A., Reeves, M., Merriman, T. R., … de los Campos, G. (2018). Untangling the complex relationships between incident gout risk, serum urate, and its comorbidities. Arthritis Research & Therapy, 20(1), 90. doi: 10.1186/s13075-018-1558-3

Clifton, B. E., Kaczmarski, J. A., Carr, P. D., Gerth, M. L., Tokuriki, N., & Jackson, C. J. (2018). Evolution of cyclohexadienyl dehydratase from an ancestral solute-binding protein. Nature Chemical Biology, 14(6), 542-547. doi: 10.1038/s41589-018-0043-2

Lim, C. S., Wardell, S. J. T., Kleffmann, T., & Brown, C. M. (2018). The exon-intron gene structure upstream of the initiation codon predicts translation efficiency. Nucleic Acids Research, 46(9), 4575-4591. doi: 10.1093/nar/gky282

Ton, K. N. T., Cree, S. L., Gronert-Sum, S. J., Merriman, T. R., Stamp, L. K., & Kennedy, M. A. (2018). Multiplexed nanopore sequencing of HLA-B locus in Māori and Pacific Island samples. Frontiers in Genetics, 9, 152. doi: 10.3389/fgene.2018.00152

Saunus, J. M., Smart, C. E., Kutasovic, J. R., Johnston, R. L., Kalita-de Croft, P., Miranda, M., … Sarkar, D., … Lakhani, S. R. (2018). Multidimensional phenotyping of breast cancer cell lines to guide preclinical research. Breast Cancer Research & Treatment, 167(1), 289-301. doi: 10.1007/s10549-017-4496-x

Liu, Y.-F., Oey, I., Bremer, P., Silcock, P., & Carne, A. (2018). Proteolytic pattern, protein breakdown and peptide production of ovomucin-depleted egg white processed with heat or pulsed electric fields at different pH. Food Research International, 108, 465-474. doi: 10.1016/j.foodres.2018.03.075

Stadler, T., Gavryushkina, A., Warnock, R. C. M., Drummond, A. J., & Heath, T. A. (2018). The fossilized birth-death model for the analysis of stratigraphic range data under different speciation modes. Journal of Theoretical Biology, 447, 41-55. doi: 10.1016/j.jtbi.2018.03.005

Deo, N., El-Hoss, J., Kolind, M., Mikulec, K., Peacock, L., Little, D. G., & Schindeler, A. (2018). JNK inhibitor CC-930 reduces fibrosis in a murine model of Nf1-deficient fracture repair. Journal of Applied Biomedicine, 16(4), 350-357. doi: 10.1016/j.jab.2018.01.006

Wai, D. C., Szyszka, T. N., Campbell, A. E., Kwong, C., Wilkinson-White, L. E., Silva, A. P. G., … Chalmers, J. N., Patrick, W. M., … Mackay, J. P. (2018). The BRD3 ET domain recognizes a short peptide motif through a mechanism that is conserved across chromatin remodelers and transcriptional regulators. Journal of Biological Chemistry, 293, 7160-7175. doi: 10.1074/jbc.RA117.000678

Dalbeth, N., Phipps-Green, A., Frampton, C., Neogi, T., & Merriman, T. R. (2018). Response to: 'The reference levels of serum urate for clinically evident incident gout' by Chen and Ding. Annals of the Rheumatic Diseases, 78(5), e41. doi: 10.1136/annrheumdis-2018-213372

Arun, G., Diermeier, S. D., & Spector, D. L. (2018). Therapeutic targeting of long non-coding RNAs in cancer. Trends in Molecular Medicine, 24(3), 257-277. doi: 10.1016/j.molmed.2018.01.001

Budhidarmo, R., Zhu, J., Middleton, A. J., & Day, C. L. (2018). The RING domain of RING Finger 11 (RNF11) protein binds Ubc13 and inhibits formation of polyubiquitin chains. FEBS Letters, 592(8), 1434-1444. doi: 10.1002/1873-3468.13029

Pirro, M., Bianconi, V., Schiaroli, E., Francisci, D., Mannarino, M. R., Bagaglia, F., … Merriman, T., & Baldelli, F. (2018). Elevated serum uric acid levels are associated with endothelial dysfunction in HIV patients receiving highly-active antiretroviral therapy. Atherosclerosis, 272, 101-107. doi: 10.1016/j.atherosclerosis.2018.03.031

Mastropasqua, M. C., Lamont, I., Martin, L. W., Reid, D. W., D'Orazio, M., & Battistoni, A. (2018). Efficient zinc uptake is critical for the ability of Pseudomonas aeruginosa to express virulence traits and colonize the human lung. Journal of Trace Elements in Medicine & Biology, 48, 74-80. doi: 10.1016/j.jtemb.2018.03.009

Major, T. J., Krishnan, M., Topless, R. K., Dewes, O., Thompson, J., de Zoysa, J., Stamp, L. K., … Wilcox, P., Grattan, D., … Merriman, T. R. (2018). Re: "Widespread prevalence of a CREBRF variant among Māori and Pacific children is associated with weight and height in early childhood". International Journal of Obesity & Related Metabolic Disorders, 42, 1389-1391. doi: 10.1038/s41366-018-0025-1

Talaroa, G., Harbison-Price, N., Ferguson, S. A., Carter, G. P., Williamson, D. A., Macknight, R. C., Cook, G. M., & Helkal, A. (2018). Complete genome sequence of a New Zealand isolate of the bovine pathogen Streptococcus uberis. Genome Announcements, 6(9), e00119-18. doi: 10.1128/genomeA.00119-18

Bilton, T. P., Schofield, M. R., Black, M. A., Chagné, D., Wilcox, P. L., & Dodds, K. G. (2018). Accounting for errors in low coverage high-throughput sequencing data when constructing genetic maps using biparental outcrossed populations. Genetics, 209(1), 65-76. doi: 10.1534/genetics.117.300627

Harrop, T. W. R., Denecke, S., Yang, Y. T., Chan, J., Daborn, P. J., Perry, T., & Batterham, P. (2018). Evidence for activation of nitenpyram by a mitochondrial cytochrome P450 in Drosophila melanogaster. Pest Management Science, 74(7), 1616-1622. doi: 10.1002/ps.4852

Watkins, O. C., Sharpe, M. L., Perry, N. B., & Krause, K. L. (2018). New Zealand glowworm (Arachnocampa luminosa) bioluminescence is produced by a firefly-like luciferase but an entirely new luciferin. Scientific Reports, 8(3278). doi: 10.1038/s41598-018-21298-w

Stovall, W. R., Taylor, H. R., Black, M., Grosser, S., Rutherford, K., & Gemmell, N. J. (2018). Genetic sex assignment in wild populations using genotyping‐by‐sequencing data: A statistical threshold approach. Molecular Ecology Resources, 18(2), 179-190. doi: 10.1111/1755-0998.12767

Tan, V. T. Y., Mockett, B. G., Ohline, S. M., Parfitt, K. D., Wicky, H. E., Peppercorn, K., Schoderboeck, L., Yahaya, M. F. b., Tate, W. P., Hughes, S. M., & Abraham, W. C. (2018). Lentivirus-mediated expression of human secreted amyloid precursor protein-alpha prevents development of memory and plasticity deficits in a mouse model of Alzheimer's disease. Molecular Brain, 11, 7. doi: 10.1186/s13041-018-0348-9

González-Miró, M., Rodríguez-Noda, L. M., Fariñas-Medina, M., Cedré-Marrero, B., Madariaga-Zarza, S., Zayas-Vignier, C., … Kleffmann, T., … Rehm, B. H. A. (2018). Bioengineered polyester beads co-displaying protein and carbohydrate-based antigens induce protective immunity against bacterial infection. Scientific Reports, 8, 1888. doi: 10.1038/s41598-018-20205-7

Biswas, S., & Eaton-Rye, J. J. (2018). PsbY is required for prevention of photodamage to photosystem II in a PsbM-lacking mutant of Synechocystis sp. PCC 6803. Photosynthetica, 56(1), 200-209. doi: 10.1007/s11099-018-0788-6

Tang, P.-C., MacKay, G. E., Flockhart, J. H., Keighren, M. A., Kopakaki, A., & West, J. D. (2018). Selection against BALB/c strain cells in mouse chimaeras. Biology Open, 7, bio030189. doi: 10.1242/bio.030189

Cridge, A. G., Crowe-McAuliffe, C., Mathew, S. F., & Tate, W. P. (2018). Eukaryotic translational termination efficiency is influenced by the 3' nucleotides within the ribosomal mRNA channel. Nucleic Acids Research, gkx1315. doi: 10.1093/nar/gkx1315

Campbell, H., Fleming, N., Roth, I., Mehta, S., Wiles, A., Williams, G., … Munro, F., McNoe, L., Black, M., McCall, J., Slatter, T. L., … Braithwaite, A. W. (2018). Δ133p53 isoform promotes tumour invasion and metastasis via interleukin-6 activation of JAK-STAT and RhoA-ROCK signalling. Nature Communications, 9(1), 254. doi: 10.1038/s41467-017-02408-0

Wright, D. F. B., Dalbeth, N., Phipps-Green, A. J., Merriman, T. R., Barclay, M. L., Drake, J., … Stamp, L. K. (2018). The impact of diuretic use and ABCG2 genotype on the predictive performance of a published allopurinol dosing tool. British Journal of Clinical Pharmacology, 84(5), 937-943. doi: 10.1111/bcp.13516

Gosling, A. L., Boocock, J., Dalbeth, N., Harré Hindmarsh, J., Stamp, L. K., Stahl, E. A., … Matisoo-Smith, E. A., & Merriman, T. R. (2018). Mitochondrial genetic variation and gout in Māori and Pacific people living in Aotearoa New Zealand. Annals of the Rheumatic Diseases, 77(4), 571-578. doi: 10.1136/annrheumdis-2017-212416

Lim, C. S., & Brown, C. M. (2018). Know your enemy: Successful bioinformatic approaches to predict functional RNA structures in viral RNAs. Frontiers in Microbiology, 8, 2582. doi: 10.3389/fmicb.2017.02582

Lee, S. L. J., Horsfield, J. A., Black, M. A., Rutherford, K., & Gemmell, N. J. (2018). Identification of sex differences in zebrafish (Danio rerio) brains during early sexual differentiation and masculinisation using 17α-methyltestoterone. Biology of Reproduction, 99(2), 446-460. doi: 10.1093/biolre/iox175

Groves, M. R., Schroer, C. F. E., Middleton, A. J., Lunev, S., Danda, N., Ali, A. M., … Williams, C. (2018). Structural insights into K48-linked ubiquitin chain formation by the Pex4p-Pex22p complex. Biochemical & Biophysical Research Communications, 496(2), 562-567. doi: 10.1016/j.bbrc.2017.12.150

Newton, M. S., Arcus, V. L., Gerth, M. L., & Patrick, W. M. (2018). Enzyme evolution: Innovation is easy, optimization is complicated. Current Opinion in Structural Biology, 48, 110-116. doi: 10.1016/

Wu, R., Wang, T., Warren, B. A. W., Thomson, S. J., Allan, A. C., Macknight, R. C., & Varkonyi‑Gasic, E. (2018). Kiwifruit SVP2 controls developmental and drought-stress pathways. Plant Molecular Biology, 96(3), 233-244. doi: 10.1007/s11103-017-0688-3

Chen, S., Nimick, M., Cridge, A. G., Hawkins, B. C., & Rosengren, R. J. (2018). Anticancer potential of novel curcumin analogs towards castrate-resistant prostate cancer. International Journal of Oncology, 52(2), 579-588. doi: 10.3892/ijo.2017.4207

Khan, A. A., Randhawa, M. A., Carne, A., Ahmed, I. A. M., Al-Juhaimi, F. Y., Barr, D., Reid, M., & Bekhit, A. E.-D. A. (2018). Effect of low and high pulsed electric field processing on macro and micro minerals in beef and chicken. Innovative Food Science & Emerging Technologies, 45, 273-279. doi: 10.1016/j.ifset.2017.11.012

Ryder, K., Ali, M. A., Billakanti, J., & Carne, A. (2018). Fundamental characterisation of caseins harvested by dissolved air flotation from dairy wastewater and comparison with skim milk powder. International Dairy Journal, 78, 112-121. doi: 10.1016/j.idairyj.2017.11.007

Fanning, N., Merriman, T. R., Dalbeth, N., & Stamp, L. K. (2018). An association of smoking with serum urate and gout: A health paradox. Seminars in Arthritis & Rheumatism, 47(6), 825-842. doi: 10.1016/j.semarthrit.2017.11.004

Mortuza, R., Aung, H. L., Taiaroa, G., Opel-Reading, H. K., Kleffmann, T., Cook, G. M., & Krause, K. L. (2018). Overexpression of a newly identified d-amino acid transaminase in Mycobacterium smegmatis complements glutamate racemase deletion. Molecular Microbiology, 107(2), 198-213. doi: 10.1111/mmi.13877

Forester, N. T., Lane, G. A., Steringa, M., Lamont, I. L., & Johnson, L. J. (2018). Contrasting roles of fungal siderophores in maintaining iron homeostasis in Epichloë festucae. Fungal Genetics & Biology, 111, 60-72. doi: 10.1016/j.fgb.2017.11.003

Pushparajan, C., Goswami, S. K., McAdam, C. J., Hanton, L. R., Dearden, P. K., Moratti, S. C., & Cridge, A. G. (2018). A mechanically strengthened polyacrylamide gel matrix fully compatible with electrophoresis of proteins and nucleic acids. Electrophoresis, 39(5-6), 824-832. doi: 10.1002/elps.201700303

Keats, T., Rosengren, R. J., & Ashton, J. C. (2018). The rationale for repurposing sildenafil for lung cancer treatment. Anti-Cancer Agents in Medicinal Chemistry, 18(3), 367-374. doi: 10.2174/1871520617666171103100959

Dearden, P. K., Gemmell, N. J., Mercier, O. R., Lester, P. J., Scott, M. J., Newcomb, R. D., … Penman, D. R. (2018). The potential for the use of gene drives for pest control in New Zealand: A perspective. Journal of the Royal Society of New Zealand, 48(4), 225-244. doi: 10.1080/03036758.2017.1385030

Khan, A. A., Randhawa, M. A., Carne, A., Mohamed Ahmed, I. A., Barr, D., Reid, M., & Bekhit, A. E.-D. A. (2018). Quality and nutritional minerals in chicken breast muscle treated with low and high pulsed electric fields. Food & Bioprocess Technology, 11(1), 122-131. doi: 10.1007/s11947-017-1997-x

Liu, Y.-F., Oey, I., Bremer, P., Carne, A., & Silcock, P. (2018). Bioactive peptides derived from egg proteins: A review. Critical Reviews in Food Science & Nutrition, 58(15), 2508-2530. doi: 10.1080/10408398.2017.1329704

Fitzgerald, R. P., Wardell, S., & Legge, M. (2018). Fetal genetic difference and a cosmopolitan vernacular of the right to choose. Women's Studies International Forum, 67, 110-117. doi: 10.1016/j.wsif.2017.04.001

Stamp, L. K., Merriman, T., Frampton, C., Zhang, M., Wallace, M., Miner, J. N., & Dalbeth, N. (2018). Plasma oxypurinol as a measure of adherence in clinical trials. Annals of the Rheumatic Diseases, 77(2), 313-314. doi: 10.1136/annrheumdis-2016-210661

Bishop, T. F., Martin, L. W., & Lamont, I. L. (2017). Activation of a cell surface signaling pathway in Pseudomonas aeruginosa requires ClpP protease and new sigma factor synthesis. Frontiers in Microbiology, 8, 2442. doi: 10.3389/fmicb.2017.02442

Roelands, J., Decock, J., Boughorbel, S., Rinchai, D., Maccalli, C., Ceccarelli, M., Black, M., … Hendrickx, W. (2017). A collection of annotated and harmonized human breast cancer transcriptome datasets, including immunologic classification [Data note]. F1000Research, 6, 296. doi: 10.12688/f1000research.10960.1

Ong, L., McDonald, K. O., & Ledgerwood, E. C. (2017). Differentiation and cell density upregulate cytochrome c levels in megakaryoblastic cell lines: Implications for analysis of CYCS-associated thrombocytopenia. PLoS ONE, 12(12), e0190433. doi: 10.1371/journal.pone.0190433

Lawrence, S. A., Floge, S. A., Davy, J. E., Davy, S. K., & Wilson, W. H. (2017). Exploratory analysis on Symbiodinium transcriptomes reveals potential latent infection by large dsDNA viruses. Environmental Microbiology, 19(10), 3909-3919. doi: 10.1111/1462-2920.13782

Wassenaar, M., & Major, T. (2017). Ties that bind. Junctures, 18, 48-52.

Parthasarathy, P. (2017). Exploring genetic cues to solve the gout mystery. Junctures, 2017(18), 68-69.

De Smit, E., Clarke, L., Sanfilippo, P. G., Merriman, T. R., Brown, M. A., Hill, C. L., … Giant Cell Arteritis Pathology Network. (2017). Geo-epidemiology of temporal artery biopsy-positive giant cell arteritis in Australia and New Zealand: Is there a seasonal influence? RMD Open, 3(2), e000531. doi: 10.1136/rmdopen-2017-000531

Higashino, T., Takada, T., Nakaoka, H., Toyoda, Y., Stiburkova, B., Miyata, H., … Merriman, T. R., … Matsuo, H. (2017). Multiple common and rare variants of ABCG2 cause gout. RMD Open, 3(2), e000464. doi: 10.1136/rmdopen-2017-000464

Nunn, S., & Lamont, I. (2017). Beauty is the beast. Junctures, 2017(18), 100-105.

Poulter, R., Taiaroa, G., Sumpter, N., Stockwell, P., & Butler, M. (2017). Complete genome sequence of the kiwifruit pathogen Pseudomonas syringae pv. actinidiae biovar 5, originating from Japan. Genome Announcements, 5(50), e01409-17. doi: 10.1128/genomeA.01409-17

Oulavallickal, T., Brewster, J. L., McKellar, J. L. O., Fairhurst, M. J., Tenci, N. A., & Gerth, M. L. (2017). The Pseudomonas syringae pv. actinidiae chemoreceptor protein F (PscF) periplasmic sensor domain: Cloning, purification and X-ray crystallographic analysis. Acta Crystallographica Section F, 73(12), 701-705. doi: 10.1107/s2053230x17016831

Saha, S., Hosmani, P. S., Villalobos-Ayala, K., Miller, S., Shippy, T., Flores, M., … Cridge, A., … Brown, S. J. (2017). Improved annotation of the insect vector of citrus greening disease: Biocuration by a diverse genomics community. Database, 2017, bax032. doi: 10.1093/database/bax032

Pushparajan, C., Claus, J. D., Marshall, S. D. G., & Visnovsky, G. (2017). Nutritional demands and metabolic characteristics of the DSIR-HA-1179 insect cell line during growth and infection with the Oryctes nudivirus. In Vitro Cellular & Developmental Biology: Animal, 53(10), 908-912. doi: 10.1007/s11626-017-0206-6

Seybold, A. C., Wharton, D. A., Thorne, M. A. S., & Marshall, C. J. (2017). Investigating trehalose synthesis genes after cold acclimation in the Antarctic nematode Panagrolaimus sp. DAW1. Biology Open, 6, 1953-1959. doi: 10.1242/bio.023341

Middleton, A. J., Budhidarmo, R., Das, A., Zhu, J., Foglizzo, M., Mace, P. D., & Day, C. L. (2017). The activity of TRAF RING homo- and heterodimers is regulated by zinc finger 1. Nature Communications, 8, 1788. doi: 10.1038/s41467-017-01665-3

Legge, M., & Fitzgerald, R. (2017). Deciding by numbers: The genesis of prenatal serum screening cut-off limits for down syndrome and neural tube defects. New Zealand Journal of Medical Laboratory Science, 71(3), 107-112. [Review].

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Bougen-Zhukov, N., Loh, S. Y., Lee, H. K., & Loo, L.-H. (2017). Large-scale image-based screening and profiling of cellular phenotypes. Cytometry Part A, 91(2), 115-125. doi: 10.1002/cyto.a.22909

Loo, L.-H., Bougen-Zhukov, N. M., & Tan, W.-L. C. (2017). Early spatiotemporal-specific changes in intermediate signals are predictive of cytotoxic sensitivity to TNFα and co-treatments. Scientific Reports, 7, 43541. doi: 10.1038/srep43541

Muthukaruppan, A., Lasham, A., Blenkiron, C., Woad, K. J., Black, M. A., Knowlton, N., … Shelling, A. N. (2017). Gene expression profling of breast tumours from New Zealand patients. New Zealand Medical Journal, 130(1464), 40-56. Retrieved from

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Chung, I.-M., Rahuman, A. A., Marimuthu, S., Kirthi, A. V., Anbarasan, K., Parthasarathy, P., & Rajakumar, G. (2017). Green synthesis of copper nanoparticles using Eclipta prostrata leaves extract and their antioxidant and cytotoxic activities. Experimental & Therapeutic Medicine, 14(1), 18-24. doi: 10.3892/etm.2017.4466

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Dalbeth, N., Allan, J., Gamble, G. D., Phipps-Green, A., Flynn, T. J., Mihov, B., … Stamp, L. K., & Merriman, T. R. (2017). Influence of genetic variants on renal uric acid handling in response to frusemide: An acute intervention study. RMD Open, 3(1), e000424. doi: 10.1136/rmdopen-2016-000424

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Antoun, J. S., Thomson, W. M., Merriman, T. R., Rongo, R., & Farella, M. (2017). Impact of skeletal divergence on oral health-related quality of life and self-reported jaw function. Korean Journal of Orthodontics, 47(3), 186-194. doi: 10.4041/kjod.2017.47.3.186

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Khan, A. A., Randhawa, M. A., Carne, A., Ahmed, I. A. M., Barr, D., Reid, M., & Bekhit, A. E.-D. A. (2017). Effect of low and high pulsed electric field on the quality and nutritional minerals in cold boned beef M. longissimus et lumborum. Innovative Food Science & Emerging Technologies, 41, 135-143. doi: 10.1016/j.ifset.2017.03.002

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Christensen, E. M., Patel, S. M., Korasick, D. A., Campbell, A. C., Krause, K. L., Becker, D. F., & Tanner, J. J. (2017). Resolving the cofactor-binding site in the proline biosynthetic enzyme human pyrroline-5-carboxylate reductase 1. Journal of Biological Chemistry, 292(17), 7233-7243. doi: 10.1074/jbc.M117.780288

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Mros, S., Carne, A., Ha, M., Bekhit, A. E.-D., Young, W., & McConnell, M. (2017). Comparison of the bioactivity of whole and skimmed digested sheep milk with that of digested goat and cow milk in functional cell culture assays. Small Ruminant Research, 149, 202-208. doi: 10.1016/j.smallrumres.2017.02.018

Macknight, R. C., Laing, W. A., Bulley, S. M., Broad, R. C., Johnson, A. A. T., & Hellens, R. P. (2017). Increasing ascorbate levels in crops to enhance human nutrition and plant abiotic stress tolerance. Current Opinion in Biotechnology, 44, 153-160. doi: 10.1016/j.copbio.2017.01.011

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Lamping, E., Zhu, J.-y., Niimi, M., & Cannon, R. D. (2017). Role of ectopic gene conversion in the evolution of a Candida krusei pleiotropic drug resistance transporter family. Genetics, 205(4), 1619-1639. doi: 10.1534/genetics.116.194811

Wu, R., Wang, T., Warren, B. A., Allan, A. C., Macknight, R. C., & Varkonyi-Gasic, E. (2017). Kiwifruit SVP2 gene prevents premature budbreak during dormancy. Journal of Experimental Botany, 68(5), 1071-1082. doi: 10.1093/jxb/erx014

Sopoaga, F., Zaharic, T., Kokaua, J., & Covello, S. (2017). Training a medical workforce to meet the needs of diverse minority communities. BMC Medical Education, 17, 19. doi: 10.1186/s12909-017-0858-7

Ariazi, E. A., Taylor, J. C., Black, M. A., Nicolas, E., Slifker, M. J., Azzam, D. J., & Boyd, J. (2017). A new role for ERα: Silencing via DNA methylation of basal, stem cell, and EMT genes. Molecular Cancer Research, 15(2). doi: 10.1158/1541-7786.mcr-16-0283

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Best, H. L., Neverman, N. J., Wicky, H. E., Mitchell, N. L., Leitch, B., & Hughes, S. M. (2017). Characterisation of early changes in ovine CLN5 and CLN6 Batten disease neural cultures for the rapid screening of therapeutics. Neurobiology of Disease, 100, 62-74. doi: 10.1016/j.nbd.2017.01.001

Merriman, T., & Terkeltaub, R. (2017). PPARGC1B: Insight into the expression of the gouty inflammation phenotype: PPARGC1B and gouty inflammation. Rheumatology, 56(3), 323-325. doi: 10.1093/rheumatology/kew453

Schmid, J., Day, R., Zhang, N., Dupont, P.-Y., Cox, M. P., Schardl, C. L., … Zhou, Y. (2017). Host tissue environment directs activities of an Epichloë endophyte, while it induces systemic hormone and defense responses in its native perennial ryegrass host. Molecular Plant-Microbe Interactions, 30(2), 138-149. doi: 10.1094/mpmi-10-16-0215-r

Chatterjee, A., Stockwell, P. A., Ahn, A., Rodger, E. J., Leichter, A. L., & Eccles, M. R. (2017). Genome-wide methylation sequencing of paired primary and metastatic cell lines identifies common DNA methylation changes and a role for EBF3 as a candidate epigenetic driver of melanoma metastasis. Oncotarget, 8(4), 6085-6101. doi: 10.18632/oncotarget.14042

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Rasheed, H., Phipps-Green, A., Topless, R., Hollis-Moffatt, J. E., Harré Hindmarsh, J., Franklin, C., … Stamp, L. K., & Merriman, T. R. (2013). Association of the lipoprotein receptor-related protein 2 gene with gout and non-additive interaction with alcohol consumption. Arthritis Research & Therapy, 15, R177. doi: 10.1186/ar4366

Roberts, R. L., Wallace, M. C., Jones, G. T., van Rij, A. M., Merriman, T. R., Harrison, A., … Stamp, L. K., … Highton, J., & Stebbings, S. M. (2013). Prevalence of HLA-B27 in the New Zealand population: Effect of age and ethnicity. Arthritis Research & Therapy, 15, R158. doi: 10.1186/ar4341

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Dalbeth, N., House, M. E., Gamble, G. D., Horne, A., Pool, B., Purvis, L., … Merriman, M., Cadzow, M., Phipps-Green, A., & Merriman, T. R. (2013). Population-specific influence of SLC2A9 genotype on the acute hyperuricaemic response to a fructose load. Annals of the Rheumatic Diseases, 72(11), 1868-1873. doi: 10.1136/annrheumdis-2012-202732

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Gow, P., Stamp, L., Merriman, T., Stuart, R., Winnard, D., Lindsay, K., for the New Zealand Rheumatology Association, and the Māori Gout Action Group. (2013). New urate-lowering therapies in Aotearoa New Zealand: A response to Dr Lance Gravatt's letter on benzbromarone hepatotoxicity. New Zealand Medical Journal, 126(1382). Retrieved from

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Eccles, M. R., He, S., Ahn, A., Slobbe, L. J., Jeffs, A. R., Yoon, H.-S., & Baguley, B. C. (2013). MITF and PAX3 play distinct roles in melanoma cell migration: Outline of a “genetic switch” theory involving MITF and PAX3 in proliferative and invasive phenotypes of melanoma. Frontiers in Oncology, 3, 229. doi: 10.3389/fonc.2013.00229

O'Sullivan, J. M., Pai, D. A., Cridge, A. G., Engelke, D. R., & Ganley, A. R. D. (2013). The nucleolus: A raft adrift in the nuclear sea or the keystone in nuclear structure? Biomolecular Concepts, 4(3), 277-286. doi: 10.1515/bmc-2012-0043

Awasthi, A., Woolley, A. G., Lecomte, F. J., Hung, N., Baguley, B. C., Wilbanks, S. M., Jeffs, A. R., & Tyndall, J. D. A. (2013). Variable expression of GLIPR1 correlates with invasive potential in melanoma cells. Frontiers in Oncology, 3, 225. doi: 10.3389/fonc.2013.00225

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Konings, A. F., Martin, L. W., Sharples, K. J., Roddam, L. F., Latham, R., Reid, D. W., & Lamont, I. L. (2013). Pseudomonas aeruginosa uses multiple pathways to acquire iron during chronic infection in cystic fibrosis lungs. Infection & Immunity, 81(8), 2697-2704. doi: 10.1128/IAI.00418-13

Shankar, M., Wilbanks, S. M., Nakatani, Y., Monk, B. C., & Tyndall, J. D. A. (2013). Catalysis product captured in lumazine synthase from the fungal pathogen Candida glabrata. Acta Crystallographica Section D, 69(8), 1580-1586. doi: 10.1107/S0907444913010949

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Stamp, L. K., Hazlett, J., Highton, J., & Hessian, P. A. (2013). Expression of methotrexate transporters and metabolizing enzymes in rheumatoid synovial tissue. Journal of Rheumatology, 40(9), 1519-1522. doi: 10.3899/jrheum.130066

Schumacher, F.-R., Wilson, G., & Day, C. L. (2013). The N-terminal extension of UBE2E ubiquitin–conjugating enzymes limits chain assembly. Journal of Molecular Biology, 425, 4099-4111. doi: 10.1016/j.jmb.2013.06.039

Teruel, M., McKinney, C., Balsa, A., Pascual-Salcedo, D., Rodriguez-Rodriguez, L., Ortiz, A. M., … Merriman, T., … Martin, J. (2013). Association of CD247 polymorphisms with rheumatoid arthritis: A replication study and a meta-analysis. PLoS ONE, 8(7), e68295. doi: 10.1371/journal.pone.0068295

Dowsett, M., Sestak, I., Lopez-Knowles, E., Sidhu, K., Dunbier, A. K., Cowens, J. W., … Cuzick, J. (2013). Comparison of PAM50 risk of recurrence score with Oncotype DX and IHC4 for predicting risk of distant recurrence after endocrine therapy. Journal of Clinical Oncology, 31(22), 2783-2790. doi: 10.1200/jco.2012.46.1558

Wilson, R. H., Morton, S. K., Deiderick, H., Gerth, M. L., Paul, H. A., Gerber, H., … Patrick, W. M. (2013). Engineered DNA ligases with improved activities in vitro. Protein Engineering, Design & Selection, 26(7), 471-478. doi: 10.1093/protein/gzt024

Cameron, R. C., Duncan, E. J., & Dearden, P. K. (2013). Stable reference genes for the measurement of transcript abundance during larval caste development in the honeybee. Apidologie, 44(4), 357-366. doi: 10.1007/s13592-012-0187-0

Biswas, A., Gagnon, J. N., Brouns, S. J. J., Fineran, P. C., & Brown, C. M. (2013). CRISPRTarget: Bioinformatic prediction and analysis of crRNA targets. RNA Biology, 10(5), 817-827. doi: 10.4161/rna.24046

Raymond, M. R., Wharton, D. A., & Marshall, C. J. (2013). Factors determining nematode distributions at Cape Hallett and Gondwana station, Antarctica. Antarctic Science, 25(3), 347-357. doi: 10.1017/S0954102012001162

Hyink, O., Laas, F., & Dearden, P. K. (2013). Genetic tests for alleles of complementary-sex-determiner to support honeybee breeding programmes. Apidologie, 44(3), 306-313. doi: 10.1007/s13592-012-0181-6

Willson, J. S. B., Godwin, T. D., Wiggins, G. A. R., Guilford, P. J., & McCall, J. L. (2013). Primary hepatocellular neoplasms in a MODY3 family with a novel HNF1A germline mutation. Journal of Hepatology, 59(4), 904-907. doi: 10.1016/j.jhep.2013.05.024

Reid, D. W., Latham, R., Lamont, I. L., Camara, M., & Roddam, L. F. (2013). Molecular analysis of changes in Pseudomonas aeruginosa load during treatment of a pulmonary exacerbation in cystic fibrosis. Journal of Cystic Fibrosis, 12, 688-699. doi: 10.1016/j.jcf.2013.03.008

Bah, C. S. F., Bekhit, A. E.-D. A., Carne, A., & McConnell, M. A. (2013). Slaughterhouse blood: An emerging source of bioactive compounds. Comprehensive Reviews in Food Science & Food Safety, 12(3), 314-331. doi: 10.1111/1541-4337.12013

tan Nguyen, H., Merriman, T. R., & Black, M. A. (2013). CNVrd, a read-depth algorithm for assigning copy-number at the FCGR Locus: Population-specific tagging of copy number variation at FCGR3B. PLoS ONE, 8(4), e63219. doi: 10.1371/journal.pone.0063219

Imhoff, F. M., Yang, D., Mathew, S. F., Clarkson, A. N., Kawagishi, Y., Tate, W. P., Koishi, K., & McLennan, I. S. (2013). The type 2 anti-Müllerian hormone receptor has splice variants that are dominant-negative inhibitors. FEBS Letters, 587(12), 1749-1753. doi: 10.1016/j.febslet.2013.04.014

Munday, J. S., Dunowska, M., Hills, S. F., & Laurie, R. E. (2013). Genomic characterisation of Felis catus papillomavirus-3: A novel papillomavirus detected in a feline Bowenoid in situ carcinoma. Veterinary Microbiology, 165, 319-325. doi: 10.1016/j.vetmic.2013.04.006

Wu, M. K., Sabbaghian, N., Xu, B., Addidou-Kalucki, S., Bernard, C., Zou, D., Reeve, A. E., Eccles, M. R., … Foulkes, W. D. (2013). Biallelic DICER1 mutations occur in Wilms tumours. Journal of Pathology, 230(2), 154-164. doi: 10.1002/path.4196

Osborne, A. J., Zavodna, M., Chilvers, B. L., Robertson, B. C., Negro, S. S., Kennedy, M. A., & Gemmell, N. J. (2013). Extensive variation at MHC DRBin the New Zealand sea lion (Phocarctos hookeri) provides evidence for balancing selection. Heredity, 111, 44-56. doi: 10.1038/hdy.2013.18

Najafpour, M. M., Tabrizi, M. A., Haghighi, B., Eaton-Rye, J. J., Carpentier, R., & Allakhverdiev, S. I. (2013). Imidazolium or guanidinium/layered manganese (III, IV) oxide hybrid as a promising structural model for the water-oxidizing complex of Photosystem II for artificial photosynthetic systems. Photosynthesis Research, 117, 413-421. doi: 10.1007/s11120-013-9814-5

Saraswat, M., Grand, R. S., & Patrick, W. M. (2013). Desalting DNA by drop dialysis increases library size upon transformation. Bioscience, Biotechnology, & Biochemistry, 77(2), 402-404. doi: 10.1271/bbb.120767

Robinson, P. C., Taylor, W. J., & Merriman, T. R. (2013). Author reply. Internal Medicine Journal, 43(4), 466. doi: 10.1111/imj.12094

Kenny, N. J., & Dearden, P. K. (2013). NMDA receptor expression and C terminus structure in the rotifer Brachionus plicatilis and long-term potentiation across the Metazoa. Invertebrate Neuroscience, 13, 125-134. doi: 10.1007/s10158-013-0154-0

Jones, G. T., Bown, M. J., Gretarsdottir, S., Romaine, S. P. R., Helgadottir, A., Yu, G., … Jin, C., … Phillips, L. V., Williams, M. J. A., Topless, R., Merriman, T. R., … Lewis, D. R., … van Rij, A. M. (2013). A sequence variant associated with sortilin-1 (SORT1) on 1p13.3 is independently associated with abdominal aortic aneurysm. Human Molecular Genetics, 22(14), 2941-2947. doi: 10.1093/hmg/ddt141

Wood, M., Rae, G. M., Wu, R.-M., Walton, E. F., Xue, B., Hellens, R. P., & Uversky, V. N. (2013). Actinidia DRM1: An intrinsically disordered protein whose mRNA expression is inversely correlated with spring budbreak in Kiwifruit. PLoS ONE, 8(3), e57354. doi: 10.1371/journal.pone.0057354

White, L. V., Cooke, I. R., Wakes, S. J., & Sowerby, S. J. (2013). Quantitative particle microscopy in self-metered fluids. Journal of Microscopy, 250(3), 159-165. doi: 10.1111/jmi.12031

Fitzgerald, R. P., Legge, M., & Frank, N. (2013). When biological scientists become health-care workers: Emotional labour in embryology. Human Reproduction, 28(5), 1289-1296. doi: 10.1093/humrep/det051

Ha, M., Bekhit, A. E.-D., Carne, A., & Hopkins, D. L. (2013). Comparison of the proteolytic activities of new commercially available bacterial and fungal proteases toward meat proteins. Journal of Food Science, 78(2), C170-C177. doi: 10.1111/1750-3841.12027

Dunbier, A. K., Ghazoui, Z., Anderson, H., Salter, J., Nerurkar, A., Osin, P., … Dowsett, M. (2013). Molecular profiling of aromatase inhibitor-treated post-menopausal breast tumors identifies immune-related correlates of resistance. Clinical Cancer Research, 19(10), 2775-2786. doi: 10.1158/1078-0432.ccr-12-1000

Wright, D. F. B., Stamp, L. K., Merriman, T. R., Barclay, M. L., Duffull, S. B., & Holford, N. H. G. (2013). The population pharmacokinetics of allopurinol and oxypurinol in patients with gout. European Journal of Clinical Pharmacology, 69(7), 1411-1421. doi: 10.1007/s00228-013-1478-8

Burut-Archanai, S., Eaton-Rye, J. J., Incharoensakdi, A., & Powtongsook, S. (2013). Phosphorus removal in a closed recirculating aquaculture system using the cyanobacterium Synechocystis sp. PCC 6803 strain lacking the SphU regulator of the Pho regulon. Biochemical Engineering Journal, 74, 69-75. doi: 10.1016/j.bej.2013.03.004

Nakatani, Y., Kleffmann, T., Linke, K., Condon, S. M., Hinds, M. G., & Day, C. L. (2013). Regulation of ubiquitin transfer by XIAP, a dimeric RING E3 ligase. Biochemical Journal, 450(3), 629-638. doi: 10.1042/BJ20121702

Lamb, J. J., Eaton-Rye, J. J., & Hohmann-Marriott, M. F. (2013). A cost-effective solution for the reliable determination of cell numbers of microorganisms in liquid culture. Current Microbiology, 67, 123-129. doi: 10.1007/s00284-013-0340-7

Stevens, S. G., & Brown, C. M. (2013). In silico estimation of translation efficiency in human cell lines: Potential evidence for widespread translational control. PLoS ONE, 8(2), e57625. doi: 10.1371/journal.pone.0057625

Porteous, C. M., Menon, D. K., Aigbirhio, F. I., Smith, R. A. J., & Murphy, M. P. (2013). P-glycoprotein (Mdr1a/1b) and breast cancer resistance protein (Bcrp) decrease the uptake of hydrophobic alkyl triphenylphosphonium cations by the brain. Biochimica et Biophysica Acta: General Subjects, 1830(6), 3458-3465. doi: 10.1016/j.bbagen.2013.02.005

Duncan, E. J., Benton, M. A., & Dearden, P. K. (2013). Canonical terminal patterning is an evolutionary novelty. Developmental Biology, 377, 245-261. doi: 10.1016/j.ydbio.2013.02.010

Summerfield, T. C., Crawford, T. S., Young, R. D., Chua, J. P. S., Macdonald, R. L., Sherman, L. A., & Eaton-Rye, J. J. (2013). Environmental pH affects photoautotrophic growth of Synechocystis sp. PCC 6803 strains carrying mutations in the lumenal proteins of PSII. Plant & Cell Physiology, 54(6), 859-874. doi: 10.1093/pcp/pct036

Butler, M. I., Stockwell, P. A., Black, M. A., Day, R. C., Lamont, I. L., & Poulter, R. T. M. (2013). Pseudomonas syringae pv. actinidiae from recent outbreaks of kiwifruit bacterial canker belong to different clones that originated in China. PLoS ONE, 8(2), e57464. doi: 10.1371/journal.pone.0057464

Duncan, E. J., Leask, M. P., & Dearden, P. K. (2013). The pea aphid (Acyrthosiphon pisum) genome encodes two divergent early developmental programs. Developmental Biology, 377, 262-274. doi: 10.1016/j.ydbio.2013.01.036

Zheng, Y., Wilson, G., Stiles, L., & Smith, P. F. (2013). Glutamate receptor subunit and calmodulin kinase II expression, with and without T maze training, in the rat hippocampus following bilateral vestibular deafferentation. PLoS ONE, 8(2), e54527. doi: 10.1371/journal.pone.0054527

Sawaya, S., Bagshaw, A., Buschiazzo, E., Kumar, P., Chowdhury, S., Black, M. A., & Gemmell, N. (2013). Microsatellite tandem repeats are abundant in human promoters and are associated with regulatory elements. PLoS ONE, 8(2), e54710. doi: 10.1371/journal.pone.0054710

Denton, M. J., Kumaramanickavel, G., & Legge, M. (2013). Cells as irreducible wholes: The failure of mechanism and the possibility of an organicist revival. Biology & Philosophy, 28(1), 31-52. doi: 10.1007/s10539-011-9285-z

Kumar, V., Kleffmann, T., Hampton, M. B., Cannell, M. B., & Winterbourn, C. C. (2013). Redox proteomics of thiol proteins in mouse heart during ischemia/reperfusion using ICAT reagents and mass spectrometry. Free Radical Biology & Medicine, 58, 109-117. doi: 10.1016/j.freeradbiomed.2013.01.021

Josephs, T. M., Liptak, M. D., Hughes, G., Lo, A., Smith, R. M., Wilbanks, S. M., … Ledgerwood, E. C. (2013). Conformational change and human cytochrome c function: Mutation of residue 41 modulates caspase activation and destabilizes Met-80 coordination. Journal of Biological Inorganic Chemistry, 18, 289-297. doi: 10.1007/s00775-012-0973-1

Wilson, M. J., & Dearden, P. K. (2013). RNA localization in the honeybee (Apis mellifera) oocyte reveals insights about the evolution of RNA localization mechanisms. Developmental Biology, 375(2), 193-201. doi: 10.1016/j.ydbio.2013.01.001

Xu, H., Black, M. A., & Craig, B. A. (2013). Evaluating accuracy of diagnostic tests with intermediate results in the absence of a gold standard. Statistics in Medicine, 32(15), 2571-2584. doi: 10.1002/sim.5695

Sorrenson, B., Suetani, R. J., Williams, M. J. A., Bickley, V. M., George, P. M., Jones, G. T., & McCormick, S. P. A. (2013). Functional rescue of mutant ABCA1 proteins by sodium 4-phenylbutyrate. Journal of Lipid Research, 54, 55-62. doi: 10.1194/jlr.M027193

Smith, D. J., Anderson, G. J., Lamont, I. L., Masel, P., Campbell, S. C., & Reid, D. W. (2013). Accurate assessment of systemic iron status in cystic fibrosis will avoid the hazards of inappropriate iron supplementation. Journal of Cystic Fibrosis, 12(3), 303-304. doi: 10.1016/j.jcf.2012.10.001

Ludgate, J. L., Le Mée, G., Fukuzawa, R., Rodger, E. J., Weeks, R. J., Reeve, A. E., & Morison, I. M. (2013). Global demethylation in loss of imprinting subtype of Wilms tumor. Genes Chromosomes & Cancer, 52(2), 174-184. doi: 10.1002/gcc.22017

Forman, J., Coyle, F., Levy-Fisch, J., Roberts, P., Terry, S., & Legge, M. (2013). Screening criteria: The need to deal with new developments and ethical issues in newborn metabolic screening. Journal of Community Genetics, 4(1), 59-67. doi: 10.1007/s12687-012-0118-9

Girardin, A., McCall, J., Black, M. A., Edwards, F., Phillips, V., Taylor, E. S., Reeve, A. E., & Kemp, R. A. (2013). Inflammatory and regulatory T cells contribute to a unique immune microenvironment in tumor tissue of colorectal cancer patients. International Journal of Cancer, 132(8), 1842-1850. doi: 10.1002/ijc.27855

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Ha, M., Bekhit, A. E.-D., Carne, A., & Hopkins, D. L. (2013). Characterization of kiwifruit and asparagus enzyme extracts, and their activities toward meat proteins. Food Chemistry, 136(2), 989-998. doi: 10.1016/j.foodchem.2012.09.034

Weigel, M. T., Ghazoui, Z., Dunbier, A. K., Pancholi, S., Dowsett, M., & Martin, L.-A. (2012). Preclinical and clinical studies of estrogen deprivation support the PDGF/Abl pathway as a novel therapeutic target for overcoming endocrine resistance in breast cancer. Breast Cancer Research, 14(3), R78. doi: 10.1186/bcr3191

Baldwin, S., Revanna, R., Thomson, S., Pither-Joyce, M., Wright, K., Crowhurst, R., … Macknight, R., & McCallum, J. A. (2012). A toolkit for bulk PCR-based marker design from next-generation sequence data: Application for development of a framework linkage map in bulb onion (Allium cepa L.). BMC Genomics, 13, 637. doi: 10.1186/1471-2164-13-637

Wu, S. H., Black, M. A., North, R. A., & Rodrigo, A. G. (2012). A Bayesian model for classifying all differentially expressed proteins simultaneously in 2D PAGE gels. BMC Bioinformatics, 13, 137. doi: 10.1186/1471-2105-13-137

Middleton, A. J., Marshall, C. B., Faucher, F., Bar-Dolev, M., Braslavsky, I., Campbell, R. L., … Davies, P. L. (2012). Antifreeze protein from freeze-tolerant grass has a beta-roll fold with an irregularly structured ice-binding site. Journal of Molecular Biology, 416, 713-724. doi: 10.1016/j.jmb.2012.01.032

Gerth, M. L., Nigon, L. V., & Patrick, W. M. (2012). Characterization of the indole-3-glycerol phosphate synthase from Pseudomonas aeruginosa PAO1. Protein Journal, 31(5), 359-365. doi: 10.1007/s10930-012-9412-y

Gerth, M. L., Ferla, M. P., & Rainey, P. B. (2012). The origin and ecological significance of multiple branches for histidine utilization in Pseudomonas aeruginosa PAO1. Environmental Microbiology, 14(8), 1929-1940. doi: 10.1111/j.1462-2920.2011.02691.x

Lozano, R., Naghavi, M., Foreman, K., Lim, S., Shibuya, K., Aboyans, V., … Merriman, T. R., … Murray, C. J. L. (2012). Global and regional mortality from 235 causes of death for 20 age groups in 1990 and 2010: A systematic analysis for the Global Burden of Disease Study 2010. Lancet, 380(9859), 2095-2128. doi: 10.1016/S0140-6736(12)61728-0

Murray, C. J. L., Vos, T., Lozano, R., Naghavi, M., Flaxman, A. D., Michaud, C., … Derrett, S., … Grainger, R., … Merriman, T. R., … Taylor, W. J., … Thomson, W. M., … Lopez, A. D. (2012-2013). Disability-adjusted life years (DALYs) for 291 diseases and injuries in 21 regions, 1990-2010: A systematic analysis for the Global Burden of Disease Study 2010. Lancet, 380(9859), 2197-2223. doi: 10.1016/S0140-6736(12)61689-4

Vos, T., Flaxman, A. D., Naghavi, M., Lozano, R., Michaud, C., Ezzati, M., … Derrett, S., … Grainger, R., … Merriman, T. R., … Taylor, W. J., … Thomson, W. M., … Murray, C. J. L. (2012). Years lived with disability (YLDs) for 1160 sequelae of 289 diseases and injuries 1990-2010: A systematic analysis for the Global Burden of Disease Study 2010. Lancet, 380(9859), 2163-2196. doi: 10.1016/S0140-6736(12)61729-2

Lim, S. S., Vos, T., Flaxman, A. D., Danaei, G., Shibuya, K., Adair-Rohani, H., … Grainger, R., … Merriman, T. R., … Ezzati, M. (2012). A comparative risk assessment of burden of disease and injury attributable to 67 risk factors and risk factor clusters in 21 regions, 1990-2010: A systematic analysis for the Global Burden of Disease Study 2010. Lancet, 380(9859), 2224-2260. doi: 10.1016/S0140-6736(12)61766-8

Huang, R. Y.-J., Guilford, P., & Thiery, J. P. (2012). Early events in cell adhesion and polarity during epithelial-mesenchymal transition. Journal of Cell Science, 125(19), 4417-4422. doi: 10.1242/jcs.099697

Weller, J. L., Chee Liew, L., Hecht, V. F. G., Rajandran, V., Laurie, R. E., Ridge, S., … Macknight, R. C., & Lejeune-Hénaut, I. (2012). A conserved molecular basis for photoperiod adaptation in two temperate legumes. PNAS, 109(51), 21158-21163. doi: 10.1073/pnas.1207943110

Lee, Y. F., Miller, L. D., Chan, X. B., Black, M. A., Pang, B., Ong, C. W., … Desai, K. V. (2012). JMJD6 is a driver of cellular proliferation and motility and a marker of poor prognosis in breast cancer. Breast Cancer Research, 14(3), R85. doi: 10.1186/bcr3200

Zondag, L., Dearden, P. K., & Wilson, M. J. (2012). Deep sequencing and expression of microRNAs from early honeybee (Apis mellifera) embryos reveals a role in regulating early embryonic patterning. BMC Evolutionary Biology, 12, 211. doi: 10.1186/1471-2148-12-211

Knapp, K. M., Zebisch, M., & Sträter, N. (2012). Crystallization and preliminary X-ray analysis of the open form of human ecto-5′-nucleotidase (CD73). Acta Crystallographica Section F, 68(12), 1545-1549. doi: 10.1107/s1744309112045447

Knapp, K., Zebisch, M., Pippel, J., El-Tayeb, A., Müller, C. E., & Sträter, N. (2012). Crystal structure of the human ecto-5′-nucleotidase (CD73): Insights into the regulation of purinergic signaling. Structure, 20(12), 2161-2173. doi: 10.1016/j.str.2012.10.001

Marsman, J., & Horsfield, J. A. (2012). Long distance relationships: Enhancer-promoter communication and dynamic gene transcription. Biochimica et Biophysica Acta: Gene Regulatory Mechanisms, 1819(11-12), 1217-1227. doi: 10.1016/j.bbagrm.2012.10.008

Najafpour, M. M., Moghaddam, A. N., Yang, Y. N., Aro, E.-M., Carpentier, R., Eaton-Rye, J. J., … Allakhverdiev, S. I. (2012). Biological water-oxidizing complex: A nano-sized manganese-calcium oxide in a protein environment. Photosynthesis Research, 114(1), 1-13. doi: 10.1007/s11120-012-9778-x

Stamp, L. K., Hazlett, J., Roberts, R. L., Frampton, C., Highton, J., & Hessian, P. A. (2012). Adenosine receptor expression in rheumatoid synovium: A basis for methotrexate action. Arthritis Research & Therapy, 14, R138. doi: 10.1186/ar3871

Chatterjee, A., Rodger, E. J., Stockwell, P. A., Weeks, R. J., & Morison, I. M. (2012). Technical considerations for reduced representation bisulfite sequencing with multiplexed libraries. Journal of Biomedicine & Biotechnology, 2012, 741542. doi: 10.1155/2012/741542

Wilson, M. J., & Dearden, P. K. (2012). Pair-rule gene orthologues have unexpected maternal roles in the honeybee (Apis mellifera). PLoS ONE, 7(9), e46490. doi: 10.1371/journal.pone.0046490

Ineson, J., Stayner, C., Hazlett, J., Slobbe, L., Robson, E., Legge, M., & Eccles, M. R. (2012). Somatic reactivation of expression of the silent maternal Mest allele and acquisition of normal reproductive behaviour in a colony of Peg1/Mest mutant mice. Journal of Reproduction & Development, 58(4), 490-500.

Tyndall, J. D. A., Lue, H., Rutledge, M. T., Bernhagen, J., Hampton, M. B., & Wilbanks, S. M. (2012). Macrophage migration inhibitory factor covalently complexed with phenethyl isothiocyanate. Acta Crystallographica Section F, 68(9), 999-1002. doi: 10.1107/s1744309112030552

Chua, J. P. S., Wallace, E. J. S., Yardley, J. A., Duncan, E. J., Dearden, P. K., & Summerfield, T. C. (2012). Gene expression indicates a zone of heterocyst differentiation within the thallus of the cyanolichen Pseudocyphellaria crocata. New Phytologist, 196(3), 862-872. doi: 10.1111/j.1469-8137.2012.04272.x

Lamb, J. J., Eaton-Rye, J. J., & Hohmann-Marriott, M. F. (2012). An LED-based fluorometer for chlorophyll quantification in the laboratory and in the field. Photosynthesis Research, 114(1), 59-68. doi: 10.1007/s11120-012-9777-y

Bernhardt, H. S. (2012). The RNA world hypothesis: The worst theory of the early evolution of life (except for all the others). Biology Direct, 7, 23. doi: 10.1186/1745-6150-7-23

Fagerlund, R. D., Ooi, P. L., & Wilbanks, S. M. (2012). Soluble expression and purification of tumor suppressor WT1 and its zinc finger domain. Protein Expression & Purification, 85(2), 165-172. doi: 10.1016/j.pep.2012.08.002

Debono, R., Topless, R., Markie, D., Black, M. A., & Merriman, T. R. (2012). Analysis of the DISC1 translocation partner (11q14.3) in genetic risk of schizophrenia. Genes, Brain & Behavior, 11(7), 859-963. doi: 10.1111/j.1601-183X.2012.00832.x

Jarvis, R. M., Hughes, S. M., & Ledgerwood, E. C. (2012). Peroxiredoxin 1 functions as a signal peroxidase to receive, transduce, and transmit peroxide signals in mammalian cells. Free Radical Biology & Medicine, 53(7), 1522-1530. doi: 10.1016/j.freeradbiomed.2012.08.001

Bernhardt, H. S., & Tate, W. P. (2012). Primordial soup or vinaigrette: Did the RNA world evolve at acidic pH? Biology Direct, 7(4). doi: 10.1186/1745-6150-7-4

Kardys, I., Oemrawsingh, R. M., Kay, P., Jones, G. T., McCormick, S. P. A., Daemen, J., … Serruys, P. (2012). Lipoprotein(a), interleukin-10, C-reactive protein, and 8-year outcome after percutaneous coronary intervention. Clinical Cardiology, 35(8), 482-489. doi: 10.1002/clc.21988

Bentley, R. W., Keown, D. A., Gearry, R. B., Cameron, V. A., Keenan, J., Roberts, R. L., & Day, A. S. (2012). Vitamin D receptor polymorphisms in colorectal cancer in New Zealand: An association study. New Zealand Medical Journal, 125(1356). Retrieved from

Caldon, C. E., Sergio, C. M., Kang, J., Muthukaruppan, A., Boersma, M. N., Stone, A., … Black, M. A., … Musgrove, E. A. (2012). Cyclin E2 overexpression is associated with endocrine resistance but not insensitivity to CDK2 inhibition in human breast cancer cells. Molecular Cancer Therapeutics, 11(7), 1488-1499. doi: 10.1158/1535-7163.mct-11-0963

Chen, X. S., & Brown, C. M. (2012). Computational identification of new structured cis-regulatory elements in the 3’-untranslated region of human protein coding genes. Nucleic Acids Research, 40(18), 8862-8873. doi: 10.1093/nar/gks684

Lange, S. J., Maticzka, D., Möhl, M., Gagnon, J. N., Brown, C. M., & Backofen, R. (2012). Global or local? Predicting secondary structure and accessibility in mRNAs. Nucleic Acids Research, 40(12), 5215-5226. doi: 10.1093/nar/gks181

O'Sullivan, P., Sharples, K., Dalphin, M., Davidson, P., Gilling, P., Cambridge, L., … Luxmanan, C., … Yoon, H.-S., … Guilford, P. J. (2012). A multigene urine test for the detection and stratification of bladder cancer in patients presenting with hematuria. Journal of Urology, 188(3), 741-747. doi: 10.1016/j.juro.2012.05.003

Ryan, M. M., Ryan, B., Kyrke-Smith, M., Logan, B., Tate, W. P., Abraham, W. C., & Williams, J. M. (2012). Temporal profiling of gene networks associated with the late phase of long-term potentiation in vivo. PLoS ONE, 7(7), e40538. doi: 10.1371/journal.pone.0040538

Wilsher, M., Voight, L., Milne, D., Teh, M., Good, N., Kolbe, J., … Merriman, T., … Dalbeth, N. (2012). Prevalence of airway and parenchymal abnormalities in newly diagnosed rheumatoid arthritis. Respiratory Medicine, 106(10), 1441-1446. doi: 10.1016/j.rmed.2012.06.020

MacKenzie, L. A., Selwood, A. I., & Marshall, C. (2012). Isolation and characterization of an enzyme from the Greenshell™ mussel Perna canaliculus that hydrolyses pectenotoxins and esters of okadaic acid. Toxicon, 60(3), 406-419. doi: 10.1016/j.toxicon.2012.05.005

Mann, K. M., Ward, J. M., Yew, C. C. K., Kovochich, A., Dawson, D. W., Black, M. A., … Copeland, N. G. (2012). Sleeping Beauty mutagenesis reveals cooperating mutations and pathways in pancreatic adenocarcinoma. PNAS, 109(16), 5934-5941. doi: 10.1073/pnas.1202490109

Hsu, A., Dalbeth, N., Gow, P., Harrison, A., Highton, J., Jones, P. B., Stamp, L. K., & Merriman, T. R. (2012). No evidence for association of Chr 9p21 variant rs1333049 with gout in New Zealand case-control sample sets. Rheumatology, 51, 1129-1130. doi: 10.1093/rheumatology/kes029

Rodger, E. J., Suetani, R. J., Jones, G. T., Kleffmann, T., Carne, A., Legge, M., & McCormick, S. P. A. (2012). Proteomic analysis of aortae from human lipoprotein(a) transgenic mice shows an early metabolic response independent of atherosclerosis. PLoS ONE, 7(1), e30383. doi: 10.1371/journal.pone.0030383

Pilbrow, A. P., Folkersen, L., Pearson, J. F., Brown, C. M., McNoe, L., Wang, N. M., … Black, M. A., Troughton, R. W., Richards, A. M., … Cameron, V. A. (2012). The chromosome 9p21.3 coronary heart disease risk allele is associated with altered gene expression in normal heart and vascular tissues. PLoS ONE, 7(6), e39574. doi: 10.1371/journal.pone.0039574

Baker, E. S., Luckner, S. R., Krause, K. L., Lambden, P. R., Clarke, I. N., & Ward, V. K. (2012). Inherent structural disorder and dimerisation of murine norovirus NS1-2 protein. PLoS ONE, 7(2), e30534. doi: 10.1371/journal.pone.0030534

Chatterjee, A., Stockwell, P. A., Rodger, E. J., & Morison, I. M. (2012). Comparison of alignment software for genome-wide bisulphite sequence data. Nucleic Acids Research, 40(10), e79. doi: 10.1093/nar/gks150

Stephenson, W. J., Kirk, R. M., Kennedy, D. M., Finlayson, B. L., & Chen, Z. (2012). Long term shore platform surface lowering rates: Revisiting Gill and Lang after 32 years. Marine Geology, 299–302, 90-95. doi: 10.1016/j.margeo.2012.01.005

Van de Putte, A. P., Janko, K., Kasparova, E., Maes, G. E., Rock, J., Koubbi, P., … Marshall, C. (2012). Comparative phylogeography of three trematomid fishes reveals contrasting genetic structure patterns in benthic and pelagic species. Marine Genomics, 8, 23-34. doi: 10.1016/j.margen.2012.05.002

Wu, R.-M., Walton, E. F., Richardson, A. C., Wood, M., Hellens, R. P., & Varkonyi-Gasic, E. (2012). Conservation and divergence of four kiwifruit SVP-like MADS-box genes suggest distinct roles in kiwifruit bud dormancy and flowering. Journal of Experimental Botany, 63(2), 797-807. doi: 10.1093/jxb/err304

Robinson, P. C., Taylor, W. J., & Merriman, T. R. (2012). A systematic review of the prevalence of gout and hyperuricemia in Australia. Internal Medicine Journal, 42(9), 997-1007. doi: 10.1111/j.1445-5994.2012.02794.x

McKinney, C., & Merriman, T. R. (2012). Meta-analysis confirms a role for deletion in FCGR3B in autoimmune phenotypes. Human Molecular Genetics, 21(10), 2370-2376. doi: 10.1093/hmg/dds039

Ha, M., Bekhit, A. E.-D. A., Carne, A., & Hopkins, D. L. (2012). Characterisation of commercial papain, bromelain, actinidin and zingibain protease preparations and their activities toward meat proteins. Food Chemistry, 134(1), 95-105. doi: 10.1016/j.foodchem.2012.02.071

Evans, G. E., Martínez-Conejero, J. A., Phillipson, G. T. M., Simón, C., McNoe, L. A., Sykes, P. H., … Evans, J. J. (2012). Gene and protein expression signature of endometrial glandular and stromal compartments during the window of implantation. Fertility & Sterility, 97(6), 1365-1373. doi: 10.1016/j.fertnstert.2012.03.007

McKinney, C., Broen, J. C. A., Vonk, M. C., Beretta, L., Hesselstrand, R., Hunzelmann, N., … Merriman, T. R. (2012). Evidence that deletion at FCGR3B is a risk factor for systemic sclerosis. Genes & Immunity, 13(6), 458-460. doi: 10.1038/gene.2012.15

Bokor, A. A. M., Kohn, L. M., Poulter, R. T. M., & van Kan, J. A. L. (2012). PRP8 inteins in species of the genus Botrytis and other ascomycetes. Fungal Genetics & Biology, 49(3), 250-261. doi: 10.1016/j.fgb.2012.01.001

Legge, M., & Byers, M. S. (2012). Varying amounts of different aldehydes present in the cryoprotectants dimethyl sulphoxide and 1,2-propanediol. Cryobiology, 64(3), 297-300. doi: 10.1016/j.cryobiol.2012.02.013

Pemberton, C. J., Siriwardena, M., Kleffmann, T., Ruygrok, P., Palmer, S. C., Yandle, T. G., & Richards, A. M. (2012). First identification of circulating Prepro-A-Type natriuretic peptide (PreproANP) signal peptide fragments in humans: Initial assessment as cardiovascular biomarkers. Clinical Chemistry, 58(4), 757-767. doi: 10.1373/clinchem.2011.176990

Guiguemde, W. A., Shelat, A. A., Garcia-Bustos, J. F., Diagana, T. T., Gamo, F.-J., & Guy, R. K. (2012). Global phenotypic screening for antimalarials [Review article]. Chemistry & Biology, 19(1), 116-129. doi: 10.1016/j.chembiol.2012.01.004

Jensen, B. P., Chin, P. K. L., Roberts, R. L., & Begg, E. J. (2012). Influence of adult age on the total and free clearance and protein binding of (R)- and (S)-warfarin. British Journal of Clinical Pharmacology, 74(5), 797-805. doi: 10.1111/j.1365-2125.2012.04259.x

Garama, D., Bremer, P., & Carne, A. (2012). Extraction and analysis of carotenoids from the New Zealand sea urchin Evechinus chloroticus gonads. Acta Biochimica Polonica, 59(1), 83-85.

Pilbrow, J., Garama, D., & Carne, A. (2012). Carotenoid-binding proteins: Accessories to carotenoid function. Acta Biochimica Polonica, 59(1), 163-165.

Hollis-Moffatt, J. E., Phipps-Green, A. J., Chapman, B., Jones, G. T., van Rij, A., Gow, P. J., Harrison, A. A., Highton, J., … Stamp, L. K., … Merriman, T. R. (2012). The renal urate transporter SLC17A1 locus: Confirmation of association with gout. Arthritis Research & Therapy, 14(2), R92. doi: 10.1186/ar3816

Jackson, S. A., Hinds, M. G., & Eaton-Rye, J. J. (2012). Solution structure of CyanoP from Synechocystis sp. PCC 6803: New insights on the structural basis for functional specialization amongst PsbP family proteins. Biochimica et Biophysica Acta: Bioenergetics, 1817(8), 1331-1338. doi: 10.1016/j.bbabio.2012.02.032

Shevela, D., Eaton-Rye, J. J., Shen, J.-R., & Govindjee (2012). Photosystem II and the unique role of bicarbonate: A historical perspective. Biochimica et Biophysica Acta: Bioenergetics, 1817(8), 1134-1151. doi: 10.1016/j.bbabio.2012.04.003

Chen, A., & Brown, C. (2012). Distinct families of cis-acting RNA replication epsilon elements from hepatitis B viruses. RNA Biology, 9(2), 130-136. doi: 10.4161/rna.18649

Bricker, T. M., Roose, J. L., Fagerlund, R. D., Frankel, L. K., & Eaton-Rye, J. J. (2012). The extrinsic proteins of Photosystem II. Biochimica et Biophysica Acta: Bioenergetics, 1817(1), 121-142. doi: 10.1016/j.bbabio.2011.07.006

Vos, M. H., Bouzhir-Sima, L., Lambry, J.-C., Luo, H., Eaton-Rye, J. J., Ioanoviciu, A., … Liebl, U. (2012). Ultrafast ligand dynamics in the heme-based GAF sensor domains of the histidine kinases DosS and DosT from Mycobacterium tuberculosis. Biochemistry, 51(1), 159-166. doi: 10.1021/bi201467c

Scaletti, E. R., Luckner, S. R., & Krause, K. L. (2012). Structural features and kinetic characterization of alanine racemase from Staphylococcus aureus (Mu50). Acta Crystallographica Section D, 68, 82-92. doi: 10.1107/S0907444911050682

Hawes, T. C., Marshall, C. J., & Wharton, D. A. (2012). Ultraviolet radiation tolerance of the Antarctic springtail, Gomphiocephalus hodgsoni. Antarctic Science, 24(2), 147-153. doi: 10.1017/S0954102011000812

Baratchi, S., Evans, J., Tate, W. P., Abraham, W. C., & Connor, B. (2012). Secreted amyloid precursor proteins promote proliferation and glial differentiation of adult hippocampal neural progenitor cells. Hippocampus, 22(7), 1517-1527. doi: 10.1002/hipo.20988

Tchesnokov, E. P., Wilbanks, S. M., & Jameson, G. N. L. (2012). A strongly bound high-spin iron(II) coordinates cysteine and homocysteine in cysteine dioxygenase. Biochemistry, 51(1), 527-564. doi: 10.1021/bi201597w

Vella-Brincat, J. W. A., Begg, E. J., Jensen, B. P., Chin, P. K. L., Roberts, R. L., Fairhall, M., … Reid, K. (2012). The pharmacokinetics and pharmacogenetics of the antiemetic cyclizine in palliative care patients. Journal of Pain & Symptom Management, 43(3), 540-548. doi: 10.1016/j.jpainsymman.2011.04.022

Lasham, A., Samuel, W., Cao, H., Patel, R., Mehta, R., Stern, J. L., … Woolley, A. G., … Black, M. A., Shelling, A. N., Print, C. G., & Braithwaite, A. W. (2012). YB-1, the E2F Pathway, and regulation of tumor cell growth. Journal of the National Cancer Institute, 104(2), 133-146. doi: 10.1093/jnci/djr512

Evans, J. J., Chitcholtan, K., Dann, J. M., Guilford, P., Harris, G., Lewis, L. K., Nagase, J., … Sykes, P. H. (2012). Adrenomedullin interacts with VEGF in endometrial cancer and has varied modulation in tumours of different grades. Gynecologic Oncology, 125(1), 214-219. doi: 10.1016/j.ygyno.2011.12.429

Budhidarmo, R., Nakatani, Y., & Day, C. L. (2012). RINGs hold the key to ubiquitin transfer. Trends in Biochemical Sciences, 37(2), 58-65. doi: 10.1016/j.tibs.2011.11.001

Eglinton, T. W., Roberts, R., Pearson, J., Barclay, M., Merriman, T. R., Frizelle, F. A., & Gearry, R. B. (2012). Clinical and genetic risk factors for perianal Crohn's disease in a population-based cohort. American Journal of Gastroenterology, 107, 589-596. doi: 10.1038/ajg.2011.437

Nakatani, Y., Cutfield, S. M., Cowieson, N. P., & Cutfield, J. F. (2012). Structure and activity of exo-1,3/1,4-β-glucanase from marine bacterium Pseudoalteromonas sp. BB1 showing a novel C-terminal domain. FEBS Journal, 279(3), 464-478. doi: 10.1111/j.1742-4658.2011.08439.x

Hazlett, J., Stamp, L. K., Merriman, T., Highton, J., & Hessian, P. A. (2012). IL-23R rs11209026 polymorphism modulates IL-17A expression in patients with rheumatoid arthritis. Genes & Immunity, 13, 282-287. doi: 10.1038/gene.2011.80

Oliver, V. F., Miles, H. L., Cutfield, W. S., Hofman, P. L., Ludgate, J. L., & Morison, I. M. (2012). Defects in imprinting and genome-wide DNA methylation are not common in the in vitro fertilization population. Fertility & Sterility, 97(1), 147-153.e7. doi: 10.1016/j.fertnstert.2011.10.027

Jensen, B. P., Roberts, R. L., Vyas, R., Bonke, G., Jardine, D. L., & Begg, E. J. (2012). Influence of ABCB1 (P-glycoprotein) haplotypes on nortriptyline pharmacokinetics and nortriptyline-induced postural hypotension in healthy volunteers. British Journal of Clinical Pharmacology, 73(4), 619-628. doi: 10.1111/j.1365-2125.2011.04126.x

Chen-Xu, M., Topless, R., McKinney, C., Merriman, M. E., Phipps-Green, A., Dalbeth, N., … Harrison, A. A., Highton, J., … van Rij, A., Jones, G. T., … Stamp, L. K., … Merriman, T. R. (2012). Replication of association of the interleukin 23 receptor rs1343151 variant with rheumatoid arthritis in Caucasian sample sets. Annals of the Rheumatic Diseases, 71(1), 155-157. doi: 10.1136/annrheumdis-2011-200591

Roberts, R. L., Gallo, L.-M. D., Barclay, M. L., Gómez-García, M., Cardeña, C., Merriman, T. R., Gearry, R. B., & Martin, J. (2012). Independent replication of an association of CNVR7113.6 with Crohn's disease in caucasians. Inflammatory Bowel Diseases, 18(2), 305-311. doi: 10.1002/ibd.21752

Panjaworayan, N., & Brown, C. M. (2011). Effects of HBV genetic variability on RNAi strategies. Hepatitis Research & Treatment, 2011, 367908. doi: 10.1155/2011/367908

Dowsett, M., Smith, I., Robertson, J., Robison, L., Pinhel, I., Johnson, L., … Dunbier, A., … Bliss, J. (2011). Endocrine therapy, new biologicals, and new study designs for presurgical studies in breast cancer. Journal of the National Cancer Institute Monographs, 43, 120-123. doi: 10.1093/jncimonographs/lgr034

Miller, T. W., Balko, J. M., Fox, E. M., Ghazoui, Z., Dunbier, A., Anderson, H., … Arteaga, C. L. (2011). ERα-dependent E2F transcription can mediate resistance to estrogen deprivation in human breast cancer. Cancer Discovery, 1, 338-351. doi: 10.1158/2159-8290.CD-11-0101

Nagai, S., Felipe Alves, C. A., Kobayashi, M., & Ikeda, M. (2011). Comparative transient expression assay analysis of hycu-hr6- and IE1-dependent regulation of baculovirus gp64 early promoters in three insect cell lines. Virus Research, 155(1), 83-90. doi: 10.1016/j.virusres.2010.08.025

Lee, W., Luckner, S. R., Kisker, C., Tonge, P. J., & Engels, B. (2011). Elucidation of the protonation states of the catalytic residues in mtKasA: Implications for inhibitor design. Biochemistry, 50(25), 5743-5756. doi: 10.1021/bi200006t

Rossin, E. J., Lage, K., Raychaudhuri, S., Xavier, R. J., Tatar, D., Benita, Y., International Inflammatory Bowel Disease Genetics Constortium, including Roberts, R., Barclay, M., Gearry, R., … Daly, M. J. (2011). Proteins encoded in genomic regions associated with immune-mediated disease physically interact and suggest underlying biology. PLoS Genetics, 7(1), e1001273. doi: 10.1371/journal.pgen.1001273

Nair, A. (2011). Decision making mechanism influences the regulatory function of Notch in apoptosis. Journal of Cell & Molecular Biology, 9(1), 1-4.

Chen, X. S., Penny, D., & Collins, L. J. (2011). Characterization of RNase MRP RNA and novel snoRNAs from Giardia intestinalis and Trichomonas vaginalis. BMC Genomics, 12, 550. doi: 10.1186/1471-2164-12-550

Hollis-Moffatt, J. E., Gow, P. J., Harrison, A. A., Highton, J., Jones, P. B. B., Stamp, L. K., … Merriman, T. R. (2011). The SLC2A9 nonsynonymous Arg265His variant and gout: Evidence for a population-specific effect on severity. Arthritis Research & Therapy, 13(3), R85. doi: 10.1186/ar3356

Martin, L.-A., Ghazoui, Z., Weigel, M. T., Pancholi, S., Dunbier, A., Johnston, S., & Dowsett, M. (2011). An in vitro model showing adaptation to long-term oestrogen deprivation highlights the clinical potential for targeting kinase pathways in combination with aromatase inhibition. Steroids, 76, 772-776. doi: 10.1016/j.steroids.2011.02.035

Diaz-Gallo, L.-M., Espino-Paisán, L., Fransen, K., Gómez-García, M., van Sommeren, S., Cardeña, C., … Barclay, M. L., … Gearry, R. B., Roberts, R. L., … Merriman, T. R., … Martin, J. (2011). Differential association of two PTPN22 coding variants with Crohn's disease and ulcerative colitis. Inflammatory Bowel Diseases, 17(11), 2287-2294. doi: 10.1002/ibd.21630

Burut-Archanai, S., Eaton-Rye, J. J., & Incharoensakdi, A. (2011). Na+-stimulated phosphate uptake system in Synechocystis sp. PCC 6803 with Pst1 as a main transporter. BMC Microbiology, 11, 225. doi: 10.1186/1471-2180-11-225

Bordé, E. C., Ouzegdouh, Y., Ledgerwood, E. C., & Morison, I. M. (2011). Congenital thrombocytopenia and cytochrome c mutation: A matter of birth and death. Seminars in Thrombosis & Hemostasis, 37(6), 664-672. doi: 10.1055/s-0031-1291376

Miller, L. D., Coffman, L. G., Chou, J. W., Black, M. A., Bergh, J., Agostino, Jr, R. D., … Torti, F. M. (2011). An iron regulatory gene signature predicts outcome in breast cancer. Cancer Research, 71(21), 6728-6737. doi: 10.1158/0008-5472.can-11-1870

Chand, A. L., & Legge, M. (2011). Amino acid transport system L activity in developing mouse ovarian follicles. Human Reproduction, 26(11), 3102-3108. doi: 10.1093/humrep/der298

Brownfield, L., & Köhler, C. (2011). Unreduced gamete formation in plants: Mechanisms and prospects. Journal of Experimental Botany, 62(5), 1659-1668. doi: 10.1093/jxb/erq371

Borg, M., Brownfield, L., Khatab, H., Sidorova, A., Lingaya, M., & Twell, D. (2011). The R2R3 MYB transcription factor DUO1 activates a male germline-specific regulon essential for sperm cell differentiation in Arabidopsis. Plant Cell, 23(2), 534-549. doi: 10.1105/tpc.110.081059

Draper, R. C., Martin, L. W., Beare, P. A., & Lamont, I. L. (2011). Differential proteolysis of sigma regulators controls cell-surface signaling in Pseudomonas aeruginosa. Molecular Microbiology, 82(6), 1444-1453. doi: 10.1111/j.1365-2958.2011.07901.x

Miller, T. W., Balko, J. M., Ghazoui, Z., Dunbier, A., Anderson, H., Dowsett, M., … Arteaga, C. L. (2011). A gene expression signature from human breast cancer cells with acquired hormone independence identifies MYC as a mediator of antiestrogen resistance. Clinical Cancer Research, 17(7), 2024-2034. doi: 10.1158/1078-0432.ccr-10-2567

Lønning, P. E., Haynes, B. P., Straume, A. H., Dunbier, A., Helle, H., Knappskog, S., & Dowsett, M. (2011). Recent data on intratumor estrogens in breast cancer. Steroids, 76(8), 786-791. doi: 10.1016/j.steroids.2011.02.040

Lønning, P. E., Haynes, B. P., Straume, A. H., Dunbier, A., Helle, H., Knappskog, S., & Dowsett, M. (2011). Exploring breast cancer estrogen disposition: The basis for endocrine manipulation. Clinical Cancer Research, 17(15), 4948-4958. doi: 10.1158/1078-0432.ccr-11-0043

Ghazoui, Z., Buffa, F. M., Dunbier, A. K., Anderson, H., Dexter, T., Detre, S., … Dowsett, M. (2011). Close and stable relationship between proliferation and a hypoxia metagene in aromatase inhibitor-treated ER-positive breast cancer. Clinical Cancer Research, 17(9), 3005-3012. doi: 10.1158/1078-0432.ccr-10-1704

Dunbier, A. K., Martin, L.-A., & Dowsett, M. (2011). New and translational perspectives of oestrogen deprivation in breast cancer. Molecular & Cellular Endocrinology, 340(2), 137-141. doi: 10.1016/j.mce.2010.12.034

Dunbier, A. K., Anderson, H., Ghazoui, Z., Salter, J., Parker, J. S., Perou, C. M., … Dowsett, M. (2011). Association between breast cancer subtypes and response to neoadjuvant anastrozole. Steroids, 76(8), 736-740. doi: 10.1016/j.steroids.2011.02.025

Dunbier, A. K., Anderson, H., Ghazoui, Z., Lopez-Knowles, E., Pancholi, S., Ribas, R., … Dowsett, M. (2011). ESR1 is co-expressed with closely adjacent uncharacterised genes spanning a breast cancer susceptibility locus at 6q25.1. PLoS Genetics, 7(4), e1001382. doi: 10.1371/journal.pgen.1001382

Stamp, L. K., & Roberts, R. L. (2011). Effect of genetic polymorphisms in the folate pathway on methotrexate therapy in rheumatic diseases. Pharmacogenomics, 12(10), 1449-1463. doi: 10.2217/pgs.11.86

Merriman, T. R. (2011). Population heterogeneity in the genetic control of serum urate. Seminars in Nephrology, 31(5), 420-425. doi: 10.1016/j.semnephrol.2011.08.005

Ashcroft, A., & Lim, G. J. (2011). Medical image: Gigantic evidence for a microscopic disease [Clinical correspondence]. New Zealand Medical Journal, 124(1344). Retrieved from

Hook, S. M., Phipps-Green, A. J., Faiz, F., McNoe, L., McKinney, C., Hollis-Moffatt, J. E., & Merriman, T. R. (2011). Smad2: A candidate gene for the murine autoimmune diabetes locus Idd21.1. Journal of Clinical Endocrinology & Metabolism, 96(12), E2072-E2077. doi: 10.1210/jc.2011-0463

Day, R. C., & Beck, C. W. (2011). Transdifferentiation from cornea to lens in Xenopus laevis depends on BMP signalling and involves upregulation of Wnt signalling. BMC Developmental Biology, 11, 54. doi: 10.1186/1471-213x-11-54

Kemp, R. A., Black, M. A., McCall, J., Yoon, H.-S., Phillips, V., Anjomshoaa, A., & Reeve, A. E. (2011). T cell subpopulations in lymph nodes may not be predictive of patient outcome in colorectal cancer. Journal of Experimental & Clinical Cancer Research, 30, 78. doi: 10.1186/1756-9966-30-78

Upritchard, H. G., Yang, J., Bremer, P. J., Lamont, I. L., & McQuillan, A. J. (2011). Adsorption of enterobactin to metal oxides and the role of siderophores in bacterial adhesion to metals. Langmuir, 27(17), 10587-10596. doi: 10.1021/la202352j

Stevens, S. G., Gardner, P. P., & Brown, C. (2011). Two covariance models for iron-responsive elements. RNA Biology, 8(5), 792-801. doi: 10.4161/rna.8.5.16037

Linterman, K. S., Palmer, D. N., Kay, G. W., Barry, L. A., Mitchell, N. L., McFarlane, R. G., Black, M. A., … Hughes, S. M. (2011). Lentiviral-mediated gene transfer to the sheep brain: Implications for gene therapy in Batten disease. Human Gene Therapy, 22(8), 1011-1020. doi: 10.1089/hum.2011.026

Bird, S. D., Legge, M., & Walker, R. J. (2011). Thiols stabilize cobblestone morphology of cultured mesothelial cells. Cell Biology International, 35(8), 857-867. doi: 10.1042/CBI20100593

Wilson, M. J., & Dearden, P. K. (2011). Diversity in insect axis formation: Two orthodenticle genes and hunchback act in anterior patterning and influence dorsoventral organization in the honeybee (Apis mellifera). Development, 138(16), 3497-3507. doi: 10.1242/dev.067926

Soon, W. W., Miller, L. D., Black, M. A., Dalmasso, C., Chan, X. B., Pang, B., … Liu, E. T. (2011). Combined genomic and phenotype screening reveals secretory factor SPINK1 as an invasion and survival factor associated with patient prognosis in breast cancer. EMBO Molecular Medicine, 3(8), 451-464. doi: 10.1002/emmm.201100150

Laurie, R. E., Diwadkar, P., Jaudal, M., Zhang, L., Hecht, V., Wen, J., … Macknight, R. C. (2011). The Medicago FLOWERING LOCUS T homolog, MtFTa1, is a key regulator of flowering time. Plant Physiology, 156(4), 2207-2224. doi: 10.1104/pp.111.180182

Kalamorz, F., Keis, S., McMillan, D. G. G., Olsson, K., Stanton, J.-A., Stockwell, P., Black, M. A., … Cook, G. M. (2011). Draft genome sequence of the thermoalkaliphilic Caldalkalibacillus thermarum strain TA2.A1. Journal of Bacteriology, 193(16), 4290-4291. doi: 10.1128/jb.05035-11

Im, H., Sharpe, M. L., Strych, U., Davlieva, M., & Krause, K. L. (2011). The crystal structure of alanine racemase from Streptococcus pneumoniae, a target for structure-based drug design. BMC Microbiology, 11, 116. doi: 10.1186/1471-2180-11-116

Sowerby, S. J., Mirams, G. J., Hill, P. C., & Paulin, M. G. (2011). An axisymmetric meniscus converges particles for microscopy. Journal of Microscopy, 244(3), 230-234. doi: 10.1111/j.1365-2818.2011.03527.x

Siakkou, E., Rutledge, M. T., Wilbanks, S. M., & Jameson, G. N. L. (2011). Correlating crosslink formation with enzymatic activity in cysteine dioxygenase. Biochimica et Biophysica Acta: Proteins & Proteomics, 1814, 2003-2009. doi: 10.1016/j.bbapap.2011.07.019

Dottori, M., Tay, C., & Hughes, S. M. (2011). Neural development in human embryonic stem cells—Applications of lentiviral vectors. Journal of Cellular Biochemistry, 112(8), 1955-1962. doi: 10.1002/jcb.23116

von Zychlinski, A., Kleffmann, T., Williams, M. J. A., & McCormick, S. P. (2011). Proteomics of Lipoprotein(a) identifies a protein complement associated with response to wounding. Journal of Proteomics, 74, 2881-2891. doi: 10.1016/j.jprot.2011.07.008

Merriman, T. R., & Dalbeth, N. (2011). Genetic and environmental risk factors in hyperuricaemia and common gout. Current Rheumatology Reviews, 7(2), 114-122. doi: 10.2174/157339711795305013

Wong, C. K., Young, V. L., Kleffmann, T., & Ward, V. K. (2011). Genomic and proteomic analysis of invertebrate iridovirus type 9. Journal of Virology, 85(15), 7900-7911. doi: 10.1128/jvi.00645-11

Glubb, D. M., Gearry, R. B., Barclay, M. L., Roberts, R. L., Pearson, J., Keenan, J. I., McKenzie, J., & Bentley, R. W. (2011). NOD2 and ATG16L1 polymorphisms affect monocyte responses in Crohn's disease. World Journal of Gastroenterology, 17(23), 2829-2837. doi: 10.3748/wjg.v17.i23.2829

Suetani, R. J., Sorrenson, B., Tyndall, J. D. A., Williams, M. J. A., & McCormick, S. P. A. (2011). Homology modeling and functional testing of an ABCA1 mutation causing Tangier disease. Atherosclerosis, 218(2), 404-410. doi: 10.1016/j.atherosclerosis.2011.06.019

Martin, L. W., Reid, D. W., Sharples, K. J., & Lamont, I. L. (2011). Pseudomonas siderophores in the sputum of patients with cystic fibrosis. Biometals, 24(6), 1059-1067. doi: 10.1007/s10534-011-9464-z

Anthony, K. G., Strych, U., Yeung, K. R., Shoen, C. S., Perez, O., Krause, K. L., … Koski, R. A. (2011). New classes of alanine racemase inhibitors identified by high-throughput screening show antimicrobial activity against Mycobacterium tuberculosis. PLoS ONE, 6(5), e20374. doi: 10.1371/journal.pone.0020374

Feltham, R., Bettjeman, B., Budhidarmo, R., Mace, P. D., Shirley, S., Condon, S. M., … Day, C. L. (2011). Smac mimetics activate the E3 ligase activity of cIAP1 protein by promoting RING domain dimerization. Journal of Biological Chemistry, 286(19), 17015-17028. doi: 10.1074/jbc.M111.222919

Yeoh, C. C., Balcerowicz, M., Laurie, R., Macknight, R., & Putterill, J. (2011). Developing a method for customized induction of flowering. BMC Biotechnology, 11, 36. doi: 10.1186/1472-6750-11-36

Hohmann-Marriott, M. F., & Blankenship, R. E. (2011). Evolution of photosynthesis. Annual Review of Plant Biology, 62, 515-548. doi: 10.1146/annurev-arplant-042110-103811

Roberts, R. L., van Rij, A. M., Phillips, L. V., Young, S., McCormick, S. P. A., Merriman, T. R., & Jones, G. T. (2011). Interaction of the inflammasome genes CARD8 and NLRP3 in abdominal aortic aneurysms. Atherosclerosis, 218(1), 123-126. doi: 10.1016/j.atherosclerosis.2011.04.043

Sorrenson, B., Suetani, R. J., Bickley, V. M., George, P. M., Williams, M. J. A., Scott, R. S., & McCormick, S. P. A. (2011). An ABCA1 truncation shows no dominant negative effect in a familial hypoalphalipoproteinemia pedigree with three ABCA1 mutations. Biochemical & Biophysical Research Communications, 409(3), 400-405. doi: 10.1016/j.bbrc.2011.05.006

Baldwin, S. J., Dodds, K. G., Auvray, B., Genet, R. A., Macknight, R. C., & Jacobs, J. M. E. (2011). Association mapping of cold-induced sweetening in potato using historical phenotypic data. Annals of Applied Biology, 158(3), 248-256. doi: 10.1111/j.1744-7348.2011.00459.x

Lopez, J., John, S. W., Tenev, T., Rautureau, G. J. P., Hinds, M. G., Francalanci, F., … Day, C. L., & Meier, P. (2011). CARD-mediated autoinhibition of cIAP1's E3 ligase activity suppresses cell proliferation and migration. Molecular Cell, 42(5), 569-583. doi: 10.1016/j.molcel.2011.04.008

Nixon, G., Blattner, K., Dawson, J., Dovey, S., Black, M. A., Wilkins, G., Dunn, A. C., & McLellan, A. D. (2011). Streptokinase antibodies in patients presenting with acute coronary syndrome in three rural New Zealand populations. Journal of Clinical Pathology, 64, 426-429. doi: 10.1136/jcp.2010.085837

McCowan, L. M. E., North, R. A., Kho, E. M., Black, M. A., Chan, E. H. Y., & Dekker, G. A. (2011). Paternal contribution to small for gestational age babies: A multicenter prospective study. Obesity, 19(5), 1035-1039. doi: 10.1038/oby.2010.279

North, R. A., McCowan, L. M. E., Dekker, G. A., Poston, L., Chan, E. H. Y., Stewart, A. W., Black, M. A., … Kenny, L. C. (2011). Clinical risk prediction for pre-eclampsia in nulliparous women: Development of model in international prospective cohort. BMJ, 342, d1875. doi: 10.1136/bmj.d1875

Park, S. J., Kleffmann, T., & Hessian, P. A. (2011). The G82S polymorphism promotes glycosylation of the receptor for advanced glycation end products (RAGE) at Asn81: A comparison of wild-type RAGE with the G82S polymorphic variant. Journal of Biological Chemistry, 286(24), 21384-21392. doi: 10.1074/jbc.M111.241281

Dickerhof, N., Kleffmann, T., Jack, R., & McCormick, S. (2011). Bacitracin inhibits the reductive activity of protein disulfide isomerase by disulfide bond formation with free cysteines in the substrate-binding domain. FEBS Journal, 278(12), 2034-2043. doi: 10.1111/j.1742-4658.2011.08119.x

Meredith-Jones, K., Waters, D., Legge, M., & Jones, L. (2011). Upright water-based exercise to improve cardiovascular and metabolic health: A qualitative review. Complementary Therapies in Medicine, 19(2), 93-103. doi: 10.1016/j.ctim.2011.02.002

Wilson, M. J., Abbott, H., & Dearden, P. K. (2011). The evolution of oocyte patterning in insects: Multiple cell-signaling pathways are active during honeybee oogenesis and are likely to play a role in axis patterning. Evolution & Development, 13(2), 127-137. doi: 10.1111/j.1525-142X.2011.00463.x

Bentley, R. W., Keown, D., Merriman, T. R., Krishnan, M. R., Gearry, R. B., Barclay, M. L., Roberts, R. L., & Day, A. S. (2011). Vitamin D receptor gene polymorphism associated with inflammatory bowel disease in New Zealand males [Letter to the editor]. Alimentary Pharmacology & Therapeutics, 33(7), 855-856. doi: 10.1111/j.1365-2036.2011.04588.x

Seed, P. T., Chappell, L. C., Black, M. A., Poppe, K. K., Hwang, Y.-C., Kasabov, N., … North, R. A. (2011). Prediction of preeclampsia and delivery of small for gestational age babies based on a combination of clinical risk factors in high-risk women. Hypertension in Pregnancy, 30(1), 58-73. doi: 10.3109/10641955.2010.486460

Hecht, V., Laurie, R. E., Vander Schoor, J. K., Ridge, S., Knowles, C. L., Chee Liew, L., … Macknight, R. C., & Weller, J. L. (2011). The pea GIGAS gene is a FLOWERING LOCUS T homolog necessary for graft-transmissible specification of flowering but not for responsiveness to photoperiod. Plant Cell, 23(1), 147-161. doi: 10.1105/tpc.110.081042

Cochemé, H. M., Quin, C., McQuaker, S. J., Cabreiro, F., Logan, A., Prime, T. A., … Porteous, C. M., Smith, R. A. J., … Murphy, M. P. (2011). Measurement of H2O2 within living drosophila during aging using a ratiometric mass spectrometry probe targeted to the mitochondrial matrix. Cell Metabolism, 13(3), 340-350. doi: 10.1016/j.cmet.2011.02.003

Janko, K., Marshall, C., Musilová, Z., Van Houdt, J., Couloux, A., Cruaud, C., & Lecointre, G. (2011). Multilocus analyses of an Antarctic fish species flock (Teleostei, Notothenioidei, Trematominae): Phylogenetic approach and test of the early-radiation event. Molecular Phylogenetics & Evolution, 60(3), 305-316. doi: 10.1016/j.ympev.2011.03.008

Hawes, T. C., Marshall, C. J., & Wharton, D. A. (2011). Antifreeze proteins in the Antarctic springtail, Gressittacantha terranova. Journal of Comparative Physiology B, 181(6), 713-719. doi: 10.1007/s00360-011-0564-4

Herridge, R. P., Day, R. C., Baldwin, S., & Macknight, R. C. (2011). Rapid analysis of seed size in Arabidopsis for mutant and QTL discovery. Plant Methods, 7. doi: 10.1186/1746-4811-7-3

Anderson, C. A., Boucher, G., Lees, C. W., Franke, A., D’Amato, M., Taylor, K. D., … Barclay, M., … Roberts, R., … Gearry, R., … Rioux, J. D. (2011). Meta-analysis identifies 29 additional ulcerative colitis risk loci, increasing the number of confirmed associations to 47. Nature Genetics, 43(3), 246-254. doi: 10.1038/ng.764

Chand, A., & Legge, M. (2011). Stereological assessment of developing mouse ovarian follicles in an in vitro culture system. Anatomical Record, 294(3), 379-383. doi: 10.1002/ar.21328

Liptak, M. D., Fagerlund, R. D., Ledgerwood, E. C., Wilbanks, S. M., & Bren, K. (2011). The proapoptotic G41S mutation to human cytochrome c alters the heme electronic structure and increases the electron self-exchange rate. Journal of the American Chemical Society, 133(5), 1153-1155. doi: 10.1021/ja106328k

Smith, R. A., & Murphy, M. P. (2011). Mitochondria-targeted antioxidants as therapies. Discovery Medicine, 11(57), 106-114.

Rodríguez-Rodríguez, L., Wan Taib, W. R., Topless, R., Steer, S., González-Escribano, M. F., Balsa, A., … Merriman, T. R., & Martin, J. (2011). The PTPN22 R263Q polymorphism is a risk factor for rheumatoid arthritis in Caucasian case-control samples. Arthritis & Rheumatism, 63(2), 365-372. doi: 10.1002/art.30145

Pemberton, C. J., Richards, A. M., Siriwardena, M., Cameron, V. A., Yandle, T. G., Nicholls, M. G., Kleffmann, T., & Ruygrok, P. (2011). [Response to letter regarding article, B-Type natriuretic peptide signal peptide circulates in human blood: Evaluation as a potential biomarker of cardiac ischemia]. Circulation, 123(6), e234. doi: 10.1161/CIRCULATIONAHA.110.003574

Nagarajan, A., Winter, R., Eaton-Rye, J., & Burnap, R. (2011). A synthetic DNA and fusion PCR approach to the ectopic expression of high levels of the D1 protein of photosystem II in Synechocystis sp. PCC 6803. Journal of Photochemistry & Photobiology B, 104(1-2), 212-219. doi: 10.1016/j.jphotobiol.2011.02.009

Morgan, N. V., Goddard, S., Cardno, T. S., McDonald, D., Rahman, F., Barge, D., Ciupek, A., … Tate, W. P., … Maher, E. R. (2011). Mutation in the TCRα subunit constant gene (TRAC) leads to a human immunodeficiency disorder characterized by a lack of TCRαβ+ T cells. Journal of Clinical Investigation, 121(2), 695-702. doi: 10.1172/JCI41931

Phipps-Green, A., McKinney, C., Rossol, M., Merriman, M. E., Topless, R., Hollis-Moffatt, J. E., Wan Taib, W. R., … Harrison, A. A., Highton, J., … Stamp, L. K., … Merriman, T. R. (2011). Analysis of association of DNASE2 promoter variation with rheumatoid arthritis in European Caucasians [Letter]. Annals of the Rheumatic Diseases, 70(8), 1512-1514. doi: 10.1136/ard.2010.138727

Fagerlund, R. D., & Eaton-Rye, J. J. (2011). The lipoproteins of cyanobacterial photosystem II. Journal of Photochemistry & Photobiology B, 104(1-2), 191-203. doi: 10.1016/j.jphotobiol.2011.01.022

Roberts, R. L., Hollis-Moffatt, J. E., Gómez-García, M., Fransen, K., Ponsioen, C. Y., Crusius, B. A., … Merriman, T. R., Barclay, M. L., Gearry, R. B., & Alizadeh, B. Z. (2011). Association of the protein-tyrosine phosphatase nonreceptor type substrate 1 (PTPNS1) gene with inflammatory bowel disease. Inflammatory Bowel Diseases, 17(2), E19-E21. doi: 10.1002/ibd.21470

Kafka, A. P., Kleffmann, T., Rades, T., & McDowell, A. (2011). The application of MALDI TOF MS in biopharmaceutical research. International Journal of Pharmaceutics, 417(1-2), 70-82. doi: 10.1016/j.ijpharm.2010.12.010

Ehimen, E. A., Sun, Z. F., Carrington, C. G., Birch, E. J., & Eaton-Rye, J. J. (2011). Anaerobic digestion of microalgae residues resulting from the biodiesel production process. Applied Energy, 88(10), 3454-3463. doi: 10.1016/j.apenergy.2010.10.020

Legge, M., Jones, L. M., & McLeod, B. J. (2011). Energy substrate utilization in the common brushtailed possum (Trichosurus vulpecula) using intravenous tolerance tests. Comparative Biochemistry & Physiology Part B, 158(2), 132-135. doi: 10.1016/j.cbpb.2010.10.007

Donaldson, A. E., Walker, N. K., Lamont, I. L., Cordiner, S. J., & Taylor, M. C. (2011). Characterising the dynamics of expirated bloodstain pattern formation using high-speed digital video imaging. International Journal of Legal Medicine, 125, 757-762. doi: 10.1007/s00414-010-0498-5

Ryan, M. M., Mason-Parker, S. E., Tate, W. P., Abraham, W. C., & Williams, J. M. (2011). Rapidly induced gene networks following induction of long-term potentiation at perforant path synapses in vivo. Hippocampus, 21(5), 541-553. doi: 10.1002/hipo.20770

Merriman, T. R., & Dalbeth, N. (2011). The genetic basis of hyperuricaemia and gout. Joint Bone Spine, 78(1), 35-40. doi: 10.1016/j.jbspin.2010.02.027

McKinney, C. (2010). [Review of the book Artscience: Creativity in the post-Google generation]. Junctures, 13, 93-94.

Stebbings, S., Jenks, K., Roberts, R., & Schultz, M. (2010). The immune response to gut bacteria in spondyloarthritis: A role in pathogenesis? Journal of Clinical Rheumatology & Musculoskeletal Medicine, 1(2).

Machutta, C. A., Bommineni, G. R., Luckner, S. R., Kapilashrami, K., Ruzsicska, B., Simmerling, C., … Tonge, P. J. (2010). Slow onset inhibition of bacterial β-ketoacyl-acyl carrier protein synthases by thiolactomycin. Journal of Biological Chemistry, 285(9), 6161-6169. doi: 10.1074/jbc.M109.077909

Luckner, S. R., Liu, N., am Ende, C. W., Tonge, P. J., & Kisker, C. (2010). A slow, tight binding inhibitor of InhA, the enoyl-acyl carrier protein reductase from Mycobacterium tuberculosis. Journal of Biological Chemistry, 285(19), 14330-14337. doi: 10.1074/jbc.M109.090373

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