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Otago Biochemistry publications: journal articles

Journal - Research Article

Adhikari, B. R., Sinha, S., Lyons, N., Pletzer, D., Lamont, I., Gordon, K. C., & Das, S. C. (2022). Inhalable ceftazidime-roflumilast powder targeting infection and inflammation: Influence of incorporating roflumilast into ceftazidime-leucine co-amorphous formulation. European Journal of Pharmaceutics & Biopharmaceutics. Advance online publication. doi: 10.1016/j.ejpb.2022.10.005

Ahmmed, M. K., Carne, A., Tian, H. S., & Bekhit, A. E.-D. A. (2022). The effect of pulsed electric fields on the extracted total lipid yield and the lipidomic profile of hoki roe. Food Chemistry, 384, 132476. doi: 10.1016/j.foodchem.2022.132476

Ahmmed, M. K., Carne, A., Tian, H. S., & Bekhit, A. E.-D. A. (2022). Use of fungal and bacterial protease preparations to enhance extraction of lipid from fish roe: Effect on lipidomic profile of extracted oil. Food Chemistry: X, 16, 100499. doi: 10.1016/j.fochx.2022.100499

Al-Zubaidi, A., Cheung, C.-Y., Cook, G. M., Taiaroa, G., Mizrahi, V., Lott, J. S., & Dawes, S. S. (2022). RNase HI depletion strongly potentiates cell killing by rifampicin in mycobacteria. Antimicrobial Agents & Chemotherapy, 66(10). doi: 10.1128/aac.02091-21

Bae, M., Cassilly, C. D., Liu, X., Park, S.-M., Tusi, B. K., Chen, X., … Filipčík, P., … Clardy, J. (2022). Akkermansia muciniphila phospholipid induces homeostatic immune responses. Nature. Advance online publication. doi: 10.1038/s41586-022-04985-7

Baker, M. G., Gurney, J., Moreland, N. J., Bennett, J., Oliver, J., Williamson, D. A., Pierse, N., … Merriman, T. R., … Edwards, R., … Thomson, W. M., Zhang, J., & Lennon, D. (2022). Risk factors for acute rheumatic fever: A case-control study. Lancet Regional Health: Western Pacific. Advance online publication. doi: 10.1016/j.lanwpc.2022.100508

Biswas, S., & Eaton-Rye, J. J. (2022). PsbX maintains efficient electron transport in Photosystem II and reduces susceptibility to high light in Synechocystis sp. PCC 6803. Biochimica et Biophysica Acta: Bioenergetics, 1863, 148519. doi: 10.1016/j.bbabio.2021.148519

Bougen-Zhukov, N., Decourtye-Espiard, L., Mitchell, W., Redpath, K., Perkinson, J., Godwin, T., Black, M. A., & Guilford, P. (2022). E-cadherin-deficient cells are sensitive to the multikinase inhibitor dasatinib. Cancers, 14, 1609. doi: 10.3390/cancers14071609

Bunga, S. J., Ahmmed, M. K., Lawley, B., Carne, A., & Bekhit, A. E.-D. A. (2022). Physicochemical, biochemical and microbiological changes of jeotgal-like fermented Chinook salmon (Oncorhynchus tshawytscha) roe. Food Chemistry, 133880. Advance online publication. doi: 10.1016/j.foodchem.2022.133880

Burnett, A., Ahmmed, M. K., Carne, A., Tian, H. S., Ahmed, I. A. M., Al-Juhaimi, F. Y., & Bekhit, A. E.-D. A. (2022). Effect of pulsed electric fields on the lipidomic profile of lipid extracted from hoki fish male gonad. Foods, 11(4), 610. doi: 10.3390/foods11040610

Careno, D. A., Perez Santangelo, S., Macknight, R. C., & Yanovsky, M. J. (2022). The 5ʹ-3ʹ mRNA decay pathway modulates the plant circadian network in Arabidopsis. Plant & Cell Physiology, pcac126. Advance online publication. doi: 10.1093/pcp/pcac126

Carlson, J. C., Krishnan, M., Rosenthal, S. L., Russell, E. M., Zhang, J. Z., Hawley, N. L., Moors, J., … Stamp, L. K., … Merriman, T. R., … Minster, R. L. (2022). A stop-gain variant in BTNL9 is associated with atherogenic lipid profiles. Human Genetics & Genomic Advances. Advance online publication. doi: 10.1016/j.xhgg.2022.100155

Caulton, A., Dodds, K. G., McRae, K. M., Couldrey, C., Horvath, S., & Clarke, S. M. (2022). Development of epigenetic clocks for key ruminant species. Genes, 13, 96. doi: 10.3390/genes13010096

Chinzowu, T., Chyou, T.-y., & Nishtala, P. S. (2022). Antibacterial-associated acute kidney injury among older adults: A post-marketing surveillance study using the FDA Adverse Events Reporting System. Pharmacoepidemiology & Drug Safety. Advance online publication. doi: 10.1002/pds.5486

Choo, P., Forsman, J. A., Hui, L., Khaing, E. P., Summerfield, T. C., & Eaton-Rye, J. J. (2022). The PsbJ protein is required for photosystem II activity in centers lacking the PsbO and PsbV lumenal subunits. Photosynthesis Research, 151, 103-111. doi: 10.1007/s11120-021-00862-y

Dalbeth, N., Mihov, B., Stewart, A., Gamble, G. D., Merriman, T. R., Mount, D., … Stamp, L. K., & Horne, A. (2022). Effects of elevated serum urate on cardiometabolic and kidney function markers in a randomised clinical trial of inosine supplementation. Scientific Reports, 12(1), 12887. doi: 10.1038/s41598-022-17257-1

Das, A., Foglizzo, M., Padala, P., Zhu, J., & Day, C. L. (2022). TRAF trimers form immune signalling networks via RING domain dimerization. FEBS Letters. Advance online publication. doi: 10.1002/1873-3468.14530

Dearborn, J. T., Nelvagal, H. R., Rensing, N. R., Takahashi, K., Hughes, S. M., Wishart, T. M., … Sands, M. S. (2022). Effects of chronic cannabidiol in a mouse model of naturally occurring neuroinflammation, neurodegeneration, and spontaneous seizures. Scientific Reports, 12, 11286. doi: 10.1038/s41598-022-15134-5

Decourtye, L., McCallum-Loudeac, J. A., Zellhuber-McMillan, S., Young, E., Sircombe, K. J., & Wilson, M. J. (2022). Characterization of a novel Lbx1 mouse loss of function strain. Differentiation, 123, 30-41. doi: 10.1016/j.diff.2021.12.001

Douglas, J., Winter, D., McNeill, A., Carr, S., Bunce, M., French, N., … de Ligt, J., Welch, D., & Geoghegan, J. L. (2022). Tracing the international arrivals of SARS-CoV-2 Omicron variants after Aotearoa New Zealand reopened its border. Nature Communications, 13, 6484. doi: 10.1038/s41467-022-34186-9

Forde, T. L., Dennis, T. P. W., Aminu, O. R., Harvey, W. T., Hassim, A., Kiwelu, I., … Biek, R. (2022). Population genomics of Bacillus anthracis from an anthrax hyperendemic area reveals transmission processes across spatial scales and unexpected within-host diversity. Microbial Genomics, 8, 000759. doi: 10.1099/mgen.0.000759

Gao, Q., Cheng, X., Merriman, T. R., Wang, C., Cui, L., Zhang, H., … Lu, J. (2022). Manifestations de la goutte chez 9754 patients d’un centre clinique chinois: étude observationnelle sur 10 ans. Revue du Rhumatisme, 89, 65-71. doi: 10.1016/j.rhum.2021.07.002

Gardner, P. P., Paterson, J. M., McGimpsey, S., Ashari-Ghomi, F., Umu, S. U., Pawlik, A., Gavryushkin, A., & Black, M. A. (2022). Sustained software development, not number of citations or journal choice, is indicative of accurate bioinformatic software. Genome Biology, 23, 56. doi: 10.1186/s13059-022-02625-x

Guévremont, D., Tsui, H., Knight, R. G., Fowler, C. J., Masters, C. L., Martins, R. N., Abraham, W. C., Tate, W. P., Cutfield, N. J., & Williams, J. M. (2022). Plasma microRNA vary in association with the progression of Alzheimer's disease. Alzheimer’s & Dementia: Diagnosis, Assessment & Disease Monitoring, 14, e12251. doi: 10.1002/dad2.12251

Ha, M., Bekhit, A. E.-D., McConnell, M., & Carne, A. (2022). A simple method for enrichment of β-lactoglobulin from bovine milk whey involving selective hydrolysis by two fungal protease preparations. Food Chemistry, 368, 130820. doi: 10.1016/j.foodchem.2021.130820

Hakkaart, C., Pearson, J. F., Marquart, L., Dennis, J., Wiggins, G. A. R., Barnes, D. R., Robinson, B. A., Mace, P. D., … Walker, L. C. (2022). Copy number variants as modifiers of breast cancer risk for BRCA1/BRCA2 pathogenic variant carriers. Communications Biology, 5, 1061. doi: 10.1038/s42003-022-03978-6

Handley, T. N. G., Kleffmann, T., & Butler, M. I. (2022). Development of ULYSSIS, a tool for the biosynthesis of cyclotides and cyclic knottins. International Journal of Peptide Research & Therapeutics, 28, 21. doi: 10.1007/s10989-021-10336-3

Hards, K., Cheung, C.-Y., Waller, N., Adolph, C., Keighley, L., Tee, Z. S., Harold, L. K., Menorca, A., … Tyndall, J. D. A., McNeil, M. B., … Opel-Reading, H. K., Krause, K. L., … Berney, M., … Cook, G. M. (2022). An amiloride derivative is active against the F1Fo-ATP synthase and cytochrome bd oxidase of Mycobacterium tuberculosis. Communications Biology, 5, 166. doi: 10.1038/s42003-022-03110-8

Harfoot, R., Lawley, B., Hernández, L. C., Kuang, J., Grant, J., Treece, J. M., LeQueux, S., Day, R., Jack, S., Stanton, J.-A. L., Bostina, M., Ussher, J. E., & Quiñones‑Mateu, M. E. (2022). Characterization of the first SARS-CoV-2 isolates from Aotearoa New Zealand as part of a rapid response to the COVID-19 pandemic. Viruses, 14, 366. doi: 10.3390/v14020366

He, Y., Xue, X., Terkeltaub, R., Dalbeth, N., Merriman, T. R., Mount, D. B., … Li, C. (2022). Association of acidic urine pH with impaired renal function in primary gout patients: A Chinese population-based cross-sectional study. Arthritis Research & Therapy, 24(1), 32. doi: 10.1186/s13075-022-02725-w

Helliwell, A. M., Stockwell, P. A., Edgar, C. D., Chatterjee, A., & Tate, W. P. (2022). Dynamic epigenetic changes during a relapse and recovery cycle in myalgic encephalomyelitis/chronic fatigue ayndrome. International Journal of Molecular Sciences, 23(19), 11852. doi: 10.3390/ijms231911852

Herridge, R., McCourt, T., Jacobs, J. M. E., Mace, P., Brownfield, L., & Macknight, R. (2022). Identification of the genes at S and Z reveals the molecular basis and evolution of grass self-incompatibility. Frontiers in Plant Science, 13, 1011299. doi: 10.3389/fpls.2022.1011299

Hitchman, L. M., Faatoese, A., Merriman, T. R., Miller, A. L., Liau, Y., Graham, O. E. E., Kee, P. S., Pearson, J. F., … Cameron, V. A., Kennedy, M. A., & Maggo, S. D. S. (2022). Allelic diversity of the pharmacogene CYP2D6 in New Zealand Māori and Pacific peoples. Frontiers in Genetics, 13, 1016416. doi: 10.3389/fgene.2022.1016416

Hudson, D. T., Bromell, J. S., Day, R. C., McInnes, T., Ward, J. M., & Beck, C. W. (2022). Gene expression analysis of the Xenopus laevis early limb bud proximodistal axis. Developmental Dynamics. Advance online publication. doi: 10.1002/dvdy.517

Jamieson, S. A., Pudjihartono, M., Horne, C. R., Salamanca Viloria, J., Dunlop, J. L., McMillan, H. D., Day, R. C., … Mace, P. D. (2022). Nanobodies identify an activated state of the TRIB2 pseudokinase. Structure. Advance online publication. doi: 10.1016/j.str.2022.08.006

Jelley, L., Douglas, J., Ren, X., Winter, D., McNeill, A., Huang, S., French, N., Welch, D., … de Ligt, J., & Geoghegan, J. L. (2022). Genomic epidemiology of Delta SARS-CoV-2 during transition from elimination to suppression in Aotearoa New Zealand. Nature Communications, 13, 4035. doi: 10.1038/s41467-022-31784-5

Jeunen, G.-J., von Ammon, U., Cross, H., Ferreira, S., Lamare, M., Day, R., Treece, J., … Gemmell, N. J., & Stanton, J.-A. L. (2022). Moving environmental DNA (eDNA) technologies from benchtop to the field using passive sampling and PDQeX extraction. Environmental DNA. Advance online publication. doi: 10.1002/edn3.356

Karunaraj, P., Tidswell, O., Duncan, E. J., Lovegrove, M. R., Jefferies, G., Johnson, T. K., Beck, C. W., & Dearden, P. K. (2022). Noggin proteins are multifunctional extracellular regulators of cell signalling. Genetics. Advance online publication. doi: 10.1093/genetics/iyac049

Kavle, R. R., Carne, A., Bekhit, A. E.-D. A., Kebede, B., & Agyei, D. (2022). Macronutrients and mineral composition of wild harvested Prionoplus reticularis edible insect at various development stages: Nutritional and mineral safety implications. International Journal of Food Science & Technology, 57, 6270-6278. doi: 10.1111/ijfs.15545

Kavle, R. R., Carne, A., Bekhit, A. E.-D. A., Kebede, B., & Agyei, D. (2022). Proximate composition and lipid nutritional indices of larvae and pupae of the edible Huhu beetle (Prionoplus reticularis) endemic to New Zealand. Journal of Food Composition & Analysis, 104578. Advance online publication. doi: 10.1016/j.jfca.2022.104578

Kavle, R. R., Pritchard, E. T. M., Bekhit, A. E.-D. A., Carne, A., & Agyei, D. (2022). Edible insects: A bibliometric analysis and current trends of published studies (1953-2021). International Journal of Tropical Insect Science. Advance online publication. doi: 10.1007/s42690-022-00814-6

Khaing, E. P., Zhong, V., Kodru, S., Vass, I., & Eaton-Rye, J. J. (2022). Tyr244 of the D2 protein is required for correct assembly and operation of the quinone-iron-bicarbonate acceptor complex of Photosystem II. Biochemistry, 61, 1298-1312. doi: 10.1021/acs.biochem.2c00164

Kip, E., Bentall, L., Underwood, C. F. U., Hughes, S. M., & Parr-Brownlie, L. C. (2022). Patterned stimulation of the Chrimson opsin in glutamatergic motor thalamus neurons improves forelimb akinesia in parkinsonian rats. Neuroscience. Advance online publication. doi: 10.1016/j.neuroscience.2022.10.026

Lam, P., Vinnakota, C., Calvo-Flores Guzmán, B., Newland, J., Peppercorn, K., Tate, W. P., … Kwakowsky, A. (2022). Beta-amyloid (Aβ1-42) increases the expression of NKCC1 in the mouse hippocampus. Molecules, 27, 2440. doi: 10.3390/molecules27082440

Lawer, A., Tyler, C., Hards, K., Keighley, L. M., Cheung, C.-Y., Kierek, F., Su, S., … McInnes, T., Tyndall, J. D. A., Krause, K. L., Cook, G. M., & Gamble, A. B. (2022). Synthesis and biological evaluation of aurachin D analogues as inhibitors of Mycobacterium tuberculosis cytochrome bd Oxidase. ACS Medicinal Chemistry Letters. Advance online publication. doi: 10.1021/acsmedchemlett.2c00401

Lee, K., Vakili, S., Burden, H. J., Adams, S., Smith, G. C., Kulatea, B., Wright-McNaughton, M., Sword, D., … King, F., Wilcox, P., Merriman, T. R., Krebs, J. D., Hall, R. M., Murphy, R., Merry, T. L., & Shepherd, P. R. (2022). The minor allele of the CREBRF rs373863828 p.R457Q coding variant is associated with reduced levels of myostatin in males: Implications for body composition. Molecular Metabolism. Advance online publication. doi: 10.1016/j.molmet.2022.101464

Leiva, C., Riesgo, A., Combosch, D., Arias, M. B., Giribet, G., Downey, R., Kenny, N. J., & Taboada, S. (2022). Guiding marine protected area network design with comparative phylogeography and population genomics: An exemplary case from the Southern Ocean. Diversity & Distributions. Advance online publication. doi: 10.1111/ddi.13590

Lubbe, P., Rawlence, N. J., Kardailsky, O., Robertson, B. C., Day, R., Knapp, M., & Dussex, N. (2022). Mitogenomes resolve the phylogeography and divergence times within the endemic New Zealand Callaeidae (Aves: Passerida). Zoological Journal of the Linnean Society. Advance online publication. doi: 10.1093/zoolinnean/zlac060

Lupi, A. S., Sumpter, N. A., Leask, M. P., O'Sullivan, J., Fadason, T., de los Campos, G., Merriman, T. R., … Vazquez, A. I. (2022). Local genetic covariance between serum urate and kidney function estimated with Bayesian multitrait models. Genes Genomes Genetics, jkac158. Advance online publication. doi: 10.1093/g3journal/jkac158

Martín-de-Saavedra, M. D., Dos Santos, M., Culotta, L., Varea, O., Spielman, B. P., Parnell, E., … Turk, L. S., … Penzes, P. (2022). Shed CNTNAP2 ectodomain is detectable in CSF and regulates Ca2+ homeostasis and network synchrony via PMCA2/ATP2B2. Neuron, 110, 627-643. doi: 10.1016/j.neuron.2021.11.025

McCormick, N., Yokose, C., Joshi, A. D., Sheehy, S., Rosenberg, L., Warner, E. T., … Merriman, T. R., … Choi, H. K. (2022). Racial and sex disparities in gout prevalence among US adults. JAMA Network Open, 5(8), e2226804. doi: 10.1001/jamanetworkopen.2022.26804

Mehta, S., Wright, D., Black, M. A., Merrie, A., Anjomshoaa, A., Munro, F., Reeve, A., McCall, J., & Print, C. (2022). Impact of clinical data veracity on cancer genomic research. JNCI Cancer Spectrum. doi: 10.1093/jncics/pkac070

Nguyen, A. T., Damsteegt, E. L., Chia, J. H. Z., Kazeto, Y., & Lokman, P. M. (2022). Effects of gonadotropins, 11-ketotestosterone, and insulin-like growth factor-1 on target gene expression and growth of previtellogenic oocytes from shortfinned eels, Anguilla australis, in vitro. Fish Physiology & Biochemistry. Advance online publication. doi: 10.1007/s10695-022-01090-4

Nicholls, C., Chyou, T.-y., & Nishtala, P. S. (2022). Analysis of the adverse nervous system and gastrointestinal events associated with solifenacin in older adults using the US FDA adverse event reporting system. International Journal of Risk & Safety in Medicine. Advance online publication. doi: 10.3233/jrs-210054

Nishtala, P. S., & Chyou, T.-y. (2022). An updated analysis of psychotropic medicine utilisation in older people in New Zealand from 2005 to 2019. Drugs & Aging. Advance online publication. doi: 10.1007/s40266-022-00965-8

Ohline, S. M., Chan, C., Schoderboeck, L., Wicky, H. E., Tate, W. P., Hughes, S. M., & Abraham, W. C. (2022). Effect of soluble amyloid precursor protein-alpha on adult hippocampal neurogenesis in a mouse model of Alzheimer's disease. Molecular Brain, 15, 5. doi: 10.1186/s13041-021-00889-1

Palmer, H., Nimick, M., Mazumder, A., Taurin, S., Rana, Z., & Rosengren, R. J. (2022). Raloxifene suppresses tumor growth and metastasis in an orthotopic model of castration-resistant prostate cancer. Biomedicines, 10, 853. doi: 10.3390/biomedicines10040853

Paluda, A., Middleton, A. J., Rossig, C., Mace, P. D., & Day, C. L. (2022). Ubiquitin and a charged loop regulate the ubiquitin E3 ligase activity of Ark2C. Nature Communications, 13, 1181. doi: 10.1038/s41467-022-28782-y

Peppercorn, K., Kleffmann, T., Jones, O., Hughes, S., & Tate, W. (2022). Secreted amyloid precursor protein alpha, a neuroprotective protein in the brain has widespread effects on the transcriptome and proteome of human inducible pluripotent stem cell-derived glutamatergic neurons related to memory mechanisms. Frontiers in Neuroscience, 16, 858524. doi: 10.3389/fnins.2022.858524

Perez-Santangelo, S., Napier, N., Robson, F., Weller, J. L., Bond, D. M., & Macknight, R. C. (2022). A point mutation in Phytochromobilin synthase alters the circadian clock and photoperiodic flowering of Medicago truncatula. Plants, 11(3), 239. doi: 10.3390/plants11030239

Russell, E. M., Carlson, J. C., Krishnan, M., Hawley, N. L., Sun, G., Cheng, H., … Major, T. J., … Merriman, T. R., … Minster, R. L. (2022). CREBRF missense variant rs373863828 has both direct and indirect effects on type 2 diabetes and fasting glucose in Polynesian peoples living in Samoa and Aotearoa New Zealand. BMJ Open Diabetes Research & Care, 10, e002275. doi: 10.1136/bmjdrc-2021-002275

Samarth, Lee, R., Kelly, D., Turnbull, M. H., Macknight, R., Poole, A. M., & Jameson, P. E. (2022). A novel TFL1 gene induces flowering in the mast seeding alpine snow tussock, Chionochloa pallens (Poaceae). Molecular Ecology, 31, 822-838. doi: 10.1111/mec.16273

Shain, D. H., Iakovenko, N. S., Cridge, A. G., Novis, P. M., Plášek, V., & Dearden, P. K. (2022). Microinvertebrate colonization of New Zealand’s thermally extreme environments. Evolutionary Biology. Advance online publication. doi: 10.1007/s11692-022-09578-w

Shakil, M. S., Rana, Z., Hanif, M., & Rosengren, R. J. (2022). Key considerations when using the sulforhodamine B assay for screening novel anticancer agents. Anti-Cancer Drugs, 33(1), 6-10. doi: 10.1097/CAD.0000000000001131

Shehreen, S., Birkholz, N., Fineran, P. C., & Brown, C. M. (2022). Widespread repression of anti-CRISPR production by anti-CRISPR-associated proteins. Nucleic Acids Research. Advance online publication. doi: 10.1093/nar/gkac674

Smith Diaz, N., Stocker, S. L., Stamp, L. K., Dalbeth, N., Phipps-Green, A. J., Merriman, T. R., & Wright, D. F. B. (2022). An allopurinol adherence tool using plasma oxypurinol concentrations. British Journal of Clinical Pharmacology. Advance online publication. doi: 10.1111/bcp.15516

Smyth, L. C. D., Murray, H. C., Hill, M., van Leeuwen, E., Highet, B., Magon, N. J., … Mathiesen, S. N., Mockett, B., … Clarkson, A. N., … Abraham, W. C., Hughes, S. M., … Kettle, A. J., … Hampton, M. B. (2022). Neutrophil-vascular interactions drive myeloperoxidase accumulation in the brain in Alzheimer's disease. Acta Neuropathologicca Communications, 10, 38. doi: 10.1186/s40478-022-01347-2

Stewart, S., Phipps-Green, A., Gamble, G. D., Stamp, L. K., Taylor, W. J., Neogi, T., Merriman, T. R., & Dalbeth, N. (2022). Is repeat serum urate testing superior to a single test to predict incident gout over time? PLoS ONE, 17(2), e0263175. doi: 10.1371/journal.pone.0263175

Sumpter, N. A., Takei, R., Cadzow, M., Topless, R. K. G., Phipps-Green, A. J., Murphy, R., … Major, T. J., Stamp, L. K., … Merriman, T. R. (2022). Association of gout polygenic risk score with age at disease onset and tophaceous disease in European and Polynesian men with gout. Arthritis & Rheumatology. Advance online publication. doi: 10.1002/art.42393

Sun, M., Sun, W., Zhao, X., Li, Z., Dalbeth, N., Ji, A., … Merriman, T. R., & Li, C. (2022). A machine learning-assisted model for renal urate underexcretion with genetic and clinical variables among Chinese men with gout. Arthritis Research & Therapy, 24, 67. doi: 10.1186/s13075-022-02755-4

Tate, W., Walker, M., Sweetman, E., Helliwell, A., Peppercorn, K., Edgar, C., Blair, A., & Chatterjee, A. (2022). Molecular mechanisms of neuroinflammation in ME/CFS and long COVID to sustain disease and promote relapses. Frontiers in Neurology, 13, 877772. doi: 10.3389/fneur.2022.877772

Taylor, S. E., & Dearden, P. K. (2022). The Nasonia pair-rule gene regulatory network retains its function over 300 million years of evolution. Development, 149, dev199632. doi: 10.1242/dev.199632

Tessadori, F., Duran, K., Knapp, K., Fellner, M., Deciphering Developmental Disorders Study, Smithson, S., … Robertson, S. P., … Mace, P. D., Bicknell, L. S., & van Haaften, G. (2022). Recurrent de novo missense variants across multiple histone H4 genes underlie a neurodevelopmental syndrome. American Journal of Human Genetics. Advance online publication. doi: 10.1016/j.ajhg.2022.02.003

Thacharodi, A., & Lamont, I. L. (2022). Aminoglycoside resistance in Pseudomonas aeruginosa: The contribution of the MexXY-OprM efflux pump varies between isolates. Journal of Medical Microbiology, 71(6), 001551. doi: 10.1099/jmm.0.001551

Thacharodi, A., & Lamont, I. L. (2022). Aminoglycoside-modifying enzymes are sufficient to make Pseudomonas aeruginosa clinically resistant to key antibiotics. Antibiotics, 11(7), 884. doi: 10.3390/antibiotics11070884

Topless, R. K., Gaffo, A., Stamp, L. K., Robinson, P. C., Dalbeth, N., & Merriman, T. R. (2022). Gout and the risk of COVID-19 diagnosis and death in the UK Biobank: A population-based study. Lancet Rheumatology, 4, e274-e281. doi: 10.1016/S2665-9913(21)00401-X

Topless, R., Green, R., Morgan, S. L., Robinson, P., Merriman, T., & Gaffo, A. L. (2022). Folic acid and methotrexate use and their association with COVID-19 diagnosis and mortality: A case-control analysis from the UK Biobank. BMJ Open, 12, e062945. doi: 10.1136/bmjopen-2022-062945

Topless, R., Noorbaloochi, S., Merriman, T. R., & Singh, J. A. (2022). Change in serum urate level with urate-lowering therapy initiation associates in the immediate term with patient-reported outcomes in people with gout. Seminars in Arthritis & Rheumatism. Advance online publication. doi: 10.1016/j.semarthrit.2022.152057

Walker, M. O. M., Hall, K. H., Peppercorn, K., & Tate, W. P. (2022). The significance of oxidative stress in the pathophysiology of Long COVID and Myalgic Encephalomyelitis/Chronic Fatigue Syndrome (ME/CFS). Medical Research Archives, 10(9), 3050. doi: 10.18103/mra.v10i9.3050

Wang, K., Cadzow, M., Bixley, M., Leask, M. P., Merriman, M. E., Yang, Q., … Takei, R., Phipps-Green, A., Major, T. J., Topless, R., … Stamp, L. K., … Merriman, T. R. (2022). A Polynesian-specific copy number variant encompassing the MHC Class I Polypeptide-related Sequence A (MICA) gene associates with gout. Human Molecular Genetics. Advance online publication. doi: 10.1093/hmg/ddac094

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Fellner, M., Parakra, R., McDonald, K. O., Kass, I., Jameson, G. N. L., Willbanks, S. M., & Ledgerwood, E. C. (2021). Altered structure and dynamics of pathogenic cytochrome c variants correlate with increased apoptotic activity. Biochemical Journal, 478(3), 669-684. doi: 10.1042/bcj20200793

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Forsman, J. A., & Eaton-Rye, J. J. (2021). The interaction between PsbT and the DE loop of D1 in Photosystem II stabilizes the quinone-iron electron acceptor complex. Biochemistry, 60(1), 53-63. doi: 10.1021/acs.biochem.0c00668

Gao, Q., Cheng, X., Merriman, T. R., Wang, C., Cui, L., Zhang, H., … Lu, J. (2021). Trends in the manifestations of 9754 gout patients in a Chinese clinical center: A 10-year observational study. Joint Bone Spine, 88, 105078. doi: 10.1016/j.jbspin.2020.09.010

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Kenny, N. J., & Itskovich, V. B. (2021). Phylogenomic inference of the interrelationships of Lake Baikal sponges. Systematics & Biodiversity, 19(2), 209-217. doi: 10.1080/14772000.2020.1827077

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Lamichhane, R., Munro, F., Harrop, T. W. R., de la Harpe, S. M., Dearden, P. K., Vernall, A. J., McCall, J. L., & Ussher, J. E. (2021). Human liver-derived MAIT cells differ from blood MAIT cells in their metabolism and response to TCR-independent activation. European Journal of Immunology, 51, 879-892. doi: 10.1002/eji.202048830

Lawley, B., Grant, J., Harfoot, R., Treece, J. M., Day, R., Hernández, L. C., Stanton, J.-A. L., Ussher, J. E., & Quiñones‑Mateu, M. E. (2021). Rapid response to SARS-CoV-2 in Aotearoa New Zealand: Implementation of a diagnostic test and characterization of the first COVID-19 cases in the South Island. Viruses, 13(11), 2222. doi: 10.3390/v13112222

Leask, M. P., & Merriman, T. R. (2021). The genetic basis of urate control and gout: Insights into molecular pathogenesis from follow-up study of genome-wide association study loci. Best Practice & Research: Clinical Rheumatology, 101721. Advance online publication. doi: 10.1016/j.berh.2021.101721

Leask, M., Lovegrove, M., Romeril, A., Duncan, E., & Dearden, P. (2021). Evolution and genomic organization of the insect sHSP gene cluster and coordinate regulation in phenotypic plasticity. BMC Ecology & Evolution, 21, 154. doi: 10.1186/s12862-021-01885-8

Legge, M., & Fitzgerald, R. (2021). Does the Human Assisted Reproductive Technology Act 2004 need a review? Policy Quarterly, 17(1), 79-83.

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Livingstone, R. W., Elder, M. K., Singh, A., Westlake, C. M., Tate, W. P., Abraham, W. C., & Williams, J. M. (2021). Secreted amyloid precursor protein-alpha enhances LTP through the synthesis and trafficking of Ca2+-permeable AMPA receptors. Frontiers in Molecular Neuroscience, 14, 660208. doi: 10.3389/fnmol.2021.660208

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Madani, G., Lamping, E., & Cannon, R. D. (2021). Engineering a cysteine-deficient functional Candida albicans Cdr1 molecule reveals a conserved region at the cytosolic apex of ABCG transporters important for correct folding and trafficking of Cdr1. mSphere, 6(1), e01318-20. doi: 10.1128/mSphere.01318-20

Madani, G., Lamping, E., Lee, H. J., Niimi, M., Mitra, A. K., & Cannon, R. D. (2021). Small-scale plasma membrane preparation for the analysis of Candida albicans Cdr1-mGFPHis. Journal of Visualized Experiments, 172, e62592. doi: 10.3791/62592

Mandal, A. K., Leask, M. P., Estiverne, C., Choi, H. K., Merriman, T. R., & Mount, D. B. (2021). Genetic and physiological effects of insulin on human urate homeostasis. Frontiers in Physiology, 12, 713710. doi: 10.3389/fphys.2021.713710

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McCormick, N., O'Connor, M. J., Yokose, C., Merriman, T. R., Mount, D. B., Leong, A., & Choi, H. K. (2021). Assessing the causal relationships between insulin resistance and hyperuricemia and gout using bidirectional Mendelian randomization. Arthritis & Rheumatology, 73(11), 2096-2104. doi: 10.1002/art.41779

McCulloch, G. A., Foster, B. J., Dutoit, L., Harrop, T. W. R., Guhlin, J., Dearden, P. K., & Waters, J. M. (2021). Genomics reveals widespread ecological speciation in flightless insects. Systematic Biology, 70(5), 863-876. doi: 10.1093/sysbio/syaa094

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