2025
Journal - Research Article
Nah, G. S. S., Matsuo, J., Bahirvani, A. G., Kimura, S., Chin, D. W. L., Ng, K. P., … Marsman, J., Horsfield, J., … Osato, M. (2025). An upstream RUNX3 enhancer, eR3 (-18m/-28h), regulates the development of gut-associated anti-tumorigenic CD8+CD103+ cytotoxic T lymphocytes in mouse and human. Genes to Cells, 30(6), e70052. doi: 10.1111/gtc.70052
2022
Edited Book - Research
Horsfield, J., & Marsman, J. (Eds.). (2022). Chromatin: Methods and protocols: Methods in molecular biology (Vol. 2458). New York, NY: Springer, 379p. doi: 10.1007/978-1-0716-2140-0
Chapter in Book - Research
Marsman, J., Day, R. C., & Gimenez, G. (2022). Circular chromosome conformation capture sequencing (4C-Seq ) in primary adherent cells. In J. Horsfield & J. Marsman (Eds.), Chromatin: Methods and protocols: Methods in molecular biology (Vol. 2458). (pp. 301-320). New York, NY: Springer. doi: 10.1007/978-1-0716-2140-0_16
2021
Journal - Research Article
Thomas, A. L., Marsman, J., Antony, J., Schierding, W., O'Sullivan, J. M., & Horsfield, J. A. (2021). Transcriptional regulation of RUNX1: An informatics analysis. Gene, 12(8), 1175. doi: 10.3390/genes12081175
2020
Journal - Research Article
Jones, G. T., Marsman, J., Bhat, B., Phillips, V. L., Chatterjee, A., Rodger, E. J., Williams, M. J. A., van Rij, A. M., & McCormick, S. P. A. (2020). DNA methylation profiling identifies a high effect genetic variant for lipoprotein(a) levels. Epigenetics, 15(9), 949-958. doi: 10.1080/15592294.2020.1739797
Marsman, J., Gimenez, G., Day, R. C., Horsfield, J. A., & Jones, G. T. (2020). A non-coding genetic variant associated with abdominal aortic aneurysm alters ERG gene regulation. Human Molecular Genetics, 29(4), 554-565. doi: 10.1093/hmg/ddz256
Conference Contribution - Published proceedings: Abstract
Marsman, J., Gimenez, G., Day, R. C., Horsfield, J. A., & Jones, G. T. (2020). A non-coding genetic variant associated with abdominal aortic aneurysm alters ERG gene regulation. New Zealand Medical Journal, 133(1518), (pp. 98). Retrieved from https://www.nzma.org.nz/journal
2019
Journal - Research Article
Jones, G. T., Marsman, J., Pardo, L. M., Nijsten, T., De Maeseneer, M., Phillips, V., Lynch-Sutherland, C., Horsfield, J., Krysa, J., & van Rij, A. M. (2019). A variant of the castor zinc finger 1 (CASZ1) gene is differentially associated with the clinical classification of chronic venous disease. Scientific Reports, 9, 14011. doi: 10.1038/s41598-019-50586-2
Leask, M., Dowdle, A., Salvesen, H., Topless, R., Fadason, T., Wei, W., … Marsman, J., Antony, J., … Merriman, T. R., & Horsfield, J. A. (2019). Functional urate-associated genetic variants influence expression of lincRNAs LINC01229 and MAFTRR. Frontiers in Genetics, 9, 733. doi: 10.3389/fgene.2018.00733
2018
Conference Contribution - Published proceedings: Abstract
Marsman, J., Millier, M. J., Highton, J., Stamp, L. K., & Hessian, P. A. (2018). Transcriptional profiling of the subcutaneous rheumatoid nodule: An insight into pathogenic mechanisms and cellular content. Arthritis & Rheumatology, 70(9, Suppl.), 929. doi: 10.1002/art.40700
2017
Journal - Research Article
Marsman, J., Thomas, A., Osato, M., O'Sullivan, J. M., & Horsfield, J. A. (2017). A DNA contact map for the mouse Runx1 gene identifies novel haematopoietic enhancers. Scientific Reports, 7, 13347. doi: 10.1038/s41598-017-13748-8
Conference Contribution - Published proceedings: Abstract
Marsman, J., Thomas, A., Osato, M., O'Sullivan, J., & Horsfield, J. A. (2017). Identifying functional roles for novel cis-regulatory elements predicted to regulate the Runx1 gene. Proceedings of the Annual Conference of the Genetics Society of Australasia (GSA) with the New Zealand Society for Biochemistry and Molecular Biology (NZSBMB). 789. Retrieved from http://gen2017.w.events4you.currinda.com
Conference Contribution - Verbal presentation and other Conference outputs
Marsman, J. (2017, June). Understanding the genetics of cardiovascular diseases: Into the third dimension. Invited presentation at the Southern Health Symposium, Dunedin, New Zealand.
Marsman, J., Phillips, V. L., Horsfield, J. A., & Jones, G. T. (2017, September). Finding a function for genetic variants associated with abdominal aortic aneurysm. Verbal presentation at the Queenstown Molecular Biology (QMB) Meetings, Queenstown, New Zealand.
2016
Conference Contribution - Published proceedings: Abstract
Marsman, J., Thomas, A. L., Osato, M., O'Sullivan, J. M., & Horsfield, J. A. (2016). A Runx1 interactome identifies novel hematopoietic enhancers. Blood, 128(22), 726. Retrieved from http://www.bloodjournal.org
van Huffel, S., Day, R. C., Antony, J., Marsman, J., Horsfield, J. A., & Dunbier, A. K. (2016). 4CSeq analysis of a breast cancer susceptibility locus on 6q25.1. Cancer Research, 76(14, Suppl.), 4518. doi: 10.1158/1538-7445.AM2016-4518
Conference Contribution - Verbal presentation and other Conference outputs
Marsman, J. (2016, March). A loopy story of Runx1 gene regulation. Verbal presentation at the Genetics Otago Symposium, Dunedin, New Zealand.
Awarded Doctoral Degree
Marsman, J. (2016). Transcriptional regulation of the Runx1 gene (PhD). University of Otago, Dunedin, New Zealand. Retrieved from http://hdl.handle.net/10523/6329
2015
Journal - Research Article
Voets, E., Marsman, J., Demmers, J., Beijersbergen, R., & Wolthuis, R. (2015). The lethal response to Cdk1 inhibition depends on sister chromatid alignment errors generated by KIF4 and isoform 1 of PRC1. Scientific Reports, 5, 14798. doi: 10.1038/srep14798
Conference Contribution - Poster Presentation (not in published proceedings)
Marsman, J. (2015, May). Cohesin and CTCF contact regulatory elements to control runx1 expression. Poster session presented at the European Molecular Biology Organization (EMBO) Conference: Chromatin and Epigenetics, Heidelberg, Germany.
2014
Journal - Research Article
Leeke, B., Marsman, J., O'Sullivan, J. M., & Horsfield, J. A. (2014). Cohesin mutations in myeloid malignancies: Underlying mechanisms. Experimental Hematology & Oncology, 3, 13. doi: 10.1186/2162-3619-3-13
Marsman, J., O'Neill, A. C., Kao, B. R.-Y., Rhodes, J. M., Meier, M., Antony, J., Mönnich, M., & Horsfield, J. A. (2014). Cohesin and CTCF differentially regulate spatiotemporal runx1 expression during zebrafish development. Biochimica et Biophysica Acta: Gene Regulatory Mechanisms, 1839(1), 50-61. doi: 10.1016/j.bbagrm.2013.11.007
Conference Contribution - Verbal presentation and other Conference outputs
Marsman, J. (2014, November). Cohesin and CTCF regulate
unx1 expression. Verbal presentation at the Genetics Otago Annual Symposium & Workshop, Dunedin, New Zealand.
2013
Conference Contribution - Verbal presentation and other Conference outputs
Marsman, J. (2013, February). Cohesin and CTCF control runx1 expression at the onset of zebrafish haematopoiesis. Verbal presentation at the 14th Annual Australia and New Zealand Zebrafish Conference, Queenstown, New Zealand.
Marsman, J., O'Neill, A. C., Kao, B. R.-Y., Rhodes, J. M., Mönnich, M., & Horsfield, J. A. (2013, August). Cohesin and CTCF contact cis regulatory elements to control spatiotemporal runx1 expression during zebrafish development. Verbal presentation at the Queenstown Molecular Biology (QMB) Meetings, Queenstown, New Zealand.
2012
Journal - Research Article
Marsman, J., & Horsfield, J. A. (2012). Long distance relationships: Enhancer-promoter communication and dynamic gene transcription. Biochimica et Biophysica Acta: Gene Regulatory Mechanisms, 1819(11-12), 1217-1227. doi: 10.1016/j.bbagrm.2012.10.008
Conference Contribution - Poster Presentation (not in published proceedings)
Marsman, J., O'Neill, A., Kao, B., More, H., Rhodes, J., Mönnich, M., Young, S., & Horsfield, J. (2012, September). Cohesin and CTCF cooperate to initiate haematopoietic expression of RUNXI in zebrafish. Poster session presented at the Division of Health Sciences Research Forum: Health Matters: Research Excellence at Otago, Dunedin, New Zealand.
Marsman, J., O'Neill, A., Kao, B., More, H., Rhodes, J., Mönnich, M., Young, S., & Horsfield, J. (2012, September). Cohesin and CTCF cooperate to initiate haematopoietic expression of runx1 in zebrafish. Poster session presented at the Division of Health Sciences Research Forum: Health Matters: Research Excellence at Otago, Dunedin, New Zealand.
2011
Conference Contribution - Verbal presentation and other Conference outputs
Kao, B. R., Marsman, J., & Horsfield, J. A. (2011, September). A cohesin–dependent mechanism of runx1 regulation. Verbal presentation at the Queenstown Molecular Biology (QMB) Meetings, Queenstown, New Zealand.
