Professor John Crump

2026

Journal - Research Article

Hagedoorn, N. N., Murthy, S., Marchello, C. S., Williman, J., Ahmmed, F., Andrews, J. R., … Crump, J. A. (2026). Predicting Salmonella Typhi incidence using prevalence metrics from sentinel studies of community-onset bloodstream infections: A secondary analysis of observational data. Vaccine, 85, 128691. doi: 10.1016/j.vaccine.2026.128691

Baleivanualala, S. C., Soqo, V., Smita, S., Sharma, S., Devi, S. V., Delaitoga, L., … Crump, J. A., & Ussher, J. E. (2026). Antimicrobial susceptibility trends of WHO critical Gram-negative pathogens in Fijian Hospitals, 2016-2021. JAC: Antimicrobial Resistance, 8(3), dlag068. doi: 10.1093/jacamr/dlag068

Crump, J. A., Picardeau, M., Ajanovic, S. A., Bradley, J., Bramugy, J. M., Chimenya, M., … on behalf of the Febrile Illness Evaluation in a Broad Range of Endemicities (FIEBRE) Consortium. (2026). Leptospirosis incidence at four sites in Sub-Saharan Africa and South East Asia: An international multi-site hybrid surveillance study. Open Forum Infectious Diseases, 13(3), ofag021. doi: 10.1093/ofid/ofag021

Madut, D. B., Rubach, M. P., Scheutz, F., Call, D. R., Gogry, F. A., Carugati, M., … Maze, M. J., … Crump, J. A. (2026). Population structure of Escherichia coli isolated from the human bloodstream, human and animal feces, and the environment in northern Tanzania. Journal of Infectious Diseases, 233(1), 112-121. doi: 10.1093/infdis/jiaf437

2025

Journal - Research Article

Ingle, D. J., Hawkey, J., Hunt, M., Iqbal, Z., Keane, J. A., Afolayan, A. O., … Crump, J. A., … and Global Typhoid Genomics Consortium. (2025). Typhi Mykrobe: Fast and accurate lineage identification and antimicrobial resistance genotyping directly from sequence reads for the typhoid fever agent Salmonella Typhi. Genome Medicine, 17(1), 130. doi: 10.1186/s13073-025-01551-4

Crump, J. A., Mogeni, P., Ajanovic, S. A., Bramugy, J. M., Chimenya, M., Green, E. W., … on behalf of the Febrile Illness Evaluation in a Broad Range of Endemicities (FIEBRE) Consortium. (2025). Leptospirosis prevalence and risk factors among patients presenting with fever to 4 healthcare sites in Sub-Saharan Africa and South East Asia: An international multisite observational and nested case-control study. Journal of Infectious Diseases. Advance online publication. doi: 10.1093/infdis/jiaf464

Moorthy, G. S., Blocher, B. H., Madut, D. B., Miller, H. K., Perniciaro, J. L., Halliday, J. E. B., … Crump, J. A., … Rubach, M. P. (2025). Antibodies to tick salivary antigens AV422 and calreticulin in patients with spotted fever group rickettsioses and other febrile illnesses in northern Tanzania. Journal of Infectious Diseases. Advance online publication. doi: 10.1093/infdis/jiaf506

Anderson, E. M. R., Fenton, E., & Crump, J. A. (2025). Nationalism in New Zealand media during the COVID-19 pandemic: A mixed methods study. Public Health Ethics, 18(3), phaf009. doi: 10.1093/phe/phaf009

Murthy, S., Hagedoorn, N. N., Faigan, S., Rathan, M. D., Sharples, K. J., Marchello, C. S., & Crump, J. A. (2025). Global typhoid fever incidence: An updated systematic review with meta-analysis. Lancet Infectious Diseases, 25(12), 1347-1362. doi: 10.1016/s1473-3099(25)00359-7

Oo, W. T., Bowhay, T. R., Myat, T. O., Htike, W. W., Lwin, K. T., Blacksell, S. D., … Ussher, J. E., Murdoch, D. R., … Crump, J. A. (2025). Estimating scrub typhus and murine typhus incidence among adolescents and adults in Yangon, Myanmar. Tropical Medicine & International Health, 30(9), 978-986. doi: 10.1111/tmi.70010

Bowhay, T. R., Myat, T. O., Oo, W. T., Mone, H. K., Sharples, K. J., Robinson, M. T., … Ussher, J. E., Murdoch, D. R., … Crump, J. A. (2025). Prevalence and risk factors for murine typhus, scrub typhus and spotted fever group rickettsioses among adolescent and adult patients presenting to Yangon General Hospital, Yangon, Myanmar. Tropical Medicine & International Health, 30(9), 966-977. doi: 10.1111/tmi.70009

Rolfe, R. J., Crump, J. A., Maro, V. P., Mmbaga, B. T., Saganda, W., Lwezaula, B. F., & . . . (2025). Comparison of paired immunofluorescent antibody serology and real-time polymerase chain reaction testing for the detection of acute Q fever among febrile patients in Kilimanjaro, Tanzania, 2012-2014. American Journal of Tropical Medicine & Hygiene, 112(3), 533-538. doi: 10.4269/ajtmh.23-0860

Anderson, E. M. R., Fenton, E., & Crump, J. A. (2025). Pandemic treaty textual analysis: Ethics and public health implications. Journal of Public Health. Advance online publication. doi: 10.1093/pubmed/fdaf040

Moorthy, G. S., Rubach, M. P., Sechu, A., Mbwasi, R., Peter, N., Kalu, I. C., Crump, J. A., … Shayo, A. (2025). Clinical characteristics, antimicrobial resistance, and mortality of neonatal bloodstream infections in Northern Tanzania, 2022-2023. PLoS ONE, 20(3), e0319816. doi: 10.1371/journal.pone.0319816

Madut, D. B., Rubach, M. P., Hertz, J. T., Bodenham, R., William, G., Peter, T. A., … Crump, J. A. (2025). Healthcare utilisation for febrile diseases in northern Tanzania: A randomised population-based cluster survey. BMJ Global Health, 10, e017913. doi: 10.1136/bmjgh-2024-017913

Williams, R. J., Brintz, B. J., Nicholson, W. L., Crump, J. A., Moorthy, G., Maro, V. P., … Rubach, M. P. (2025). Derivation and internal validation of a clinical prediction model for diagnosis of spotted fever group rickettsioses in northern Tanzania. Open Forum Infectious Diseases. Advance online publication. doi: 10.1093/ofid/ofaf100

Shao, E. R., Tan, C. W., Mani, S., Anderson, D. E., Lwezaula, B. F., Mmbaga, B. T., … Crump, J. A., … Wang, L.-F. (2025). Seroprevalence and risk factors for Crimean-Congo hemorrhagic fever virus exposure among febrile patients in northern Tanzania. Tropical Medicine & International Health, 30, 193-200. doi: 10.1111/tmi.14082

Ngocho, J. S., Liu, J., Kalengo, N. H., Kipengele, A. H., Maro, A., Mujage, B., … Maze, M. J., … Crump, J. A., … Rubach, M. P. (2025). TaqMan Array Card real-time polymerase chain reaction panel to detect pathogens in whole blood of febrile inpatients in northern Tanzania, 2016-2019. Tropical Medicine & International Health, 30, 201-209. doi: 10.1111/tmi.14083

Bonnewell, J. P., Crump, J. A., Egger, J. R., Sakita, F. M., Hertz, J. T., Kilonzo, K. G., … Rubach, M. P. (2025). Sepsis in northern Tanzania: A prospective observational study of clinical characteristics, management, and outcomes for adolescents and adults with sepsis. Open Forum Infectious Diseases, 12(1), ofae722. doi: 10.1093/ofid/ofae722

Madut, D. B., Rubach, M. P., Allan, K. J., Thomas, K. M., de Glanville, W. A., Halliday, J. E. B., … Maze, M. J., … Crump, J. A. (2025). Epidemiologic and genomic characterization of an outbreak of Rift Valley fever among humans and dairy cattle in northern Tanzania. Journal of Infectious Diseases, 232, 298-307. doi: 10.1093/infdis/jiae562

Journal - Research Other

Belen Ibarz-Pavon, A., Bielsky, M.-C., Bose, R., Cavaleri, M., Crump, J. A., Hombach, J., … Wilder-Smith, A. (2025). Consultation report: Considerations for a regulatory pathway for bivalent Salmonella Typhi/Paratyphi A vaccines for use in endemic countries. Vaccine, 56, 127189. doi: 10.1016/j.vaccine.2025.127189

2024

Journal - Research Article

Mah, M. G., Zeller, M. A., Zhang, R., Zhuang, Y., Maro, V. P., Crump, J. A., … Su, Y. C. F. (2024). Discordant phylodynamic and spatiotemporal transmission patterns driving the long-term persistence and evolution of human coronaviruses. npj Viruses, 2, 49. doi: 10.1038/s44298-024-00058-w

Bowhay, T. R., Rubach, M. P., Mendes, Â. J. F., Nicholson, W. L., Perniciaro, J. L., Maze, M. J., … Sharples, K. J., … Crump, J. A. (2024). Risk factors for spotted fever group rickettsioses in Kilimanjaro Region, Tanzania. Open Forum Infectious Diseases, 11(12), ofae664. doi: 10.1093/ofid/ofae664

French, N. P., Thomas, K. M., Amani, N. B., Benschop, J., Bigogo, G. M., Cleaveland, S., … Crump, J. A., & Zadoks, R. N. (2024). Population structure and antimicrobial resistance in Campylobacter jejuni and C. coli isolated from humans with diarrhea and from poultry, East Africa. Emerging Infectious Diseases, 30(10), 2079-2089. doi: 10.3201/eid3010.231399

Lal, S., Luangraj, M., Keddie, S. H., Ashley, E. A., Baerenbold, O., Bassat, Q., … Crump, J. A., … the Febrile Illness Evaluation in a Broad Range of Endemicities (FIEBRE) Study Consortium. (2024). Predicting mortality in febrile adults: Comparative performance of the MEWS, qSOFA, and UVA scores using prospectively collected data among patients in four health-care sites in sub-Saharan Africa and South-Eastern Asia. eClinicalMedicine, 77, 102856. doi: 10.1016/j.eclinm.2024.102856

Rolfe, R. J., Sheldon, S. W., Kingry, L. C., Petersen, J. M., Maro, V. P., Kinabo, G. D., … Maze, M. J., … Crump, J. A. (2024). Metagenomic detection of bacterial zoonotic pathogens among febrile patients, Tanzania, 2007-2009. Emerging Infectious Diseases, 30(8), 1599-1608. doi: 10.3201/eid3008.240529

Baleivanualala, S., Matanitobua, S., Samisoni, Y., Soqo, V., Smita, S., Mailulu, J., … Crump, J. A., & Ussher, J. E. (2024). Environment contamination with carbapenem resistant Acinetobacter baumannii in healthcare settings in Fiji: A potential source of infection. Frontiers in Cellular & Infection Microbiology, 14, 1429443. doi: 10.3389/fcimb.2024.1429443

Martin, L. B., Tack, B., Marchello, C. S., Sikorski, M. J., Owusu-Dabo, E., Nyirenda, T., … Crump, J. A. (2024). Vaccine value profile for invasive non-typhoidal Salmonella disease. Vaccine, 42(19, Suppl. 1), S101-S124. doi: 10.1016/j.vaccine.2024.04.045

Baleivanualala, S. C., Matanitobua, S., Soqo, V., Smita, S., Limaono, J., Sharma, S. D., … Crump, J. A., & Ussher, J. E. (2024). Molecular and clinical epidemiology of carbapenem resistant Acinetobacter baumannii, Pseudomonas aeruginosa and Enterobacterales in Fiji: A multicentre prospective observational study. Lancet Regional Health: Western Pacific, 47(101095). doi: 10.1016/j.lanwpc.2024.101095

Moorthy, G. S., Rubach, M. P., Maze, M. J., Refuerzo, R. P., Shirima, G. M., Lukambagire, A. S., … Bowhay, T. R., … Crump, J. A., & Halliday, J. E. B. (2024). Prevalence and risk factors for Q fever, spotted fever group rickettsioses, and typhus group rickettsioses in a pastoralist community of northern Tanzania, 2016-2017. Tropical Medicine & International Health, 29, 365-376. doi: 10.1111/tmi.13980

Kim, J.-H., Tack, B., Fiorino, F., Pettini, E., Marchello, C., Jacobs, J., Crump, J., … and VACC-iNTS consortium. (2024). Examining geospatial and temporal distribution of invasive non-typhoidal Salmonella; disease occurrence in sub-Saharan Africa: A systematic review and modelling study. BMJ Open, 14(3), e080501. doi: 10.1136/bmjopen-2023-080501

Marks, F., Im, J., Park, S. E., Pak, G. D., Jeon, H. J., Wandji Nana, L. R., … Crump, J. A., … Rakotozandrindrainy, R. (2024). Incidence of typhoid fever in Burkina Faso, Democratic Republic of the Congo, Ethiopia, Ghana, Madagascar, and Nigeria (the Severe Typhoid in Africa programme): A population-based study. Lancet Global Health, 12(4), e599-e610. doi: 10.1016/S2214-109X(24)00007-X

Kim, J.-H., Choi, J., Kim, C., Pak, G. D., Parajulee, P., Haselbeck, A., … Crump, J. A., … Marks, F. (2024). Mapping the incidence rate of typhoid fever in sub-Saharan Africa. PLoS Neglected Tropical Diseases, 18(2), e0011902. doi: 10.1371/journal.pntd.0011902

Valente, M., Bramugy, J., Keddie, S. H., Hopkins, H., Bassat, Q., Baerenbold, O., … Crump, J. A. (2024). Diagnosis of human leptospirosis: systematic review and meta-analysis of the diagnostic accuracy of the Leptospira microscopic agglutination test, PCR targeting Lfb1, and IgM ELISA to Leptospira fainei serovar Hurstbridge. BMC Infectious Diseases, 24, 168. doi: 10.1186/s12879-023-08935-0

Kolandai, K., Milne, B., von Randow, M., Bullen, C., Marsh, S., & Crump, J. A. (2024). Public opinion on global COVID-19 vaccine procurement and distribution policies: A nationally representative survey in Aotearoa New Zealand 2022. Vaccine, 42, 1372-1382. doi: 10.1016/j.vaccine.2024.01.091

Hagedoorn, N. N., Murthy, S., Birkhold, M., Marchello, C. S., Crump, J. A., and the VACC-iNTS consortium collaborators. (2024). Prevalence and distribution of non-typhoidal Salmonella enterica serogroups and serovars isolated from normally sterile sites: A global systematic review. Epidemiology & Infection, 152, e4. doi: 10.1017/S0950268823001693

Bowhay, T. R., Tsang, T., Wei, J. C. Z., Edwik, W., Fridman, A., Hubber, J., Jo, J. Y., McKay, N., O'Brien, C., Osmond-Wallam, J., Smythe, J., Crump, J. A., & Arnold, B. (2024). Oral antimicrobial therapy for cellulitis versus outpatient parenteral antimicrobial therapy: A single-centre audit of cellulitis outcomes. Internal Medicine Journal, 54(2), 320-327. doi: 10.1111/imj.16173

Journal - Research Other

Hagedoorn, N. N., Maze, M. J., Carugati, M., Cash-Goldwasser, S., Allan, K. J., Chen, K. J., … German, R., … Crump, J. A. (2024). Global distribution of Leptospira serovar isolations and detections from animal host species: A systematic review and online database. Tropical Medicine & International Health, 29, 161-172. doi: 10.1111/tmi.13965

Chang, B. H., Adakun, S. A., Auma, M. A., Banura, P., Majwala, A., Mbonde, A. A., … for the Severe Respiratory Distress in Africa (SRDA) investigators, including Crump, J. A. (2024). Outcomes of WHO defined severe respiratory distress without shock in adults in sub-Saharan Africa. American Journal of Respiratory & Critical Care Medicine, 209(1), 109-112. doi: 10.1164/rccm.202304-0684LE

Conference Contribution - Verbal presentation and other Conference outputs

Baleivanualala, S. C., Isaia, L., Devi, S. V., Howden, B., Boseiwaqa, L. V., Sharma, S., … Hill, P. C., Crump, J. A., & Ussher, J. E. (2024, September). Harnessing pathogen genomics to combat antimicrobial resistance in Fiji and the Pacific. Verbal presentation at the Queenstown Research Week (QRW) Pathogen Genomics Meeting, Queenstown, New Zealand.

2023

Journal - Research Article

Meiring, J. E., Khanam, F., Basnyat, B., Charles, R. C., Crump, J. A., Debellut, F., … Gordon, M. A. (2023). Typhoid fever. Nature Reviews Disease Primers, 9, 71. doi: 10.1038/s41572-023-00480-z

Ko, E. R., Reller, M. E., Tillekeratne, L. G., Bodinayake, C. K., Miller, C., Burke, T. W., … Crump, J. A., … Woods, C. W. (2023). Host-response transcriptional biomarkers accurately discriminate bacterial and viral infections of global relevance. Scientific Reports, 13, 22554. doi: 10.1038/s41598-023-49734-6

Maze, M. J., Shirima, G. M., Lukambagire, A.-H. S., Bodenham, R. F., Rubach, M. P., Cash-Goldwasser, S., … Crump, J. A., & Halliday, J. E. B. (2023). Prevalence and risk factors for human leptospirosis at a hospital serving a pastoralist community, Endulen, Tanzania. PLoS Neglected Tropical Diseases, 17(12), e0011855. doi: 10.1371/journal.pntd.0011855

Baleivanualala, S. C., Isaia, L., Devi, S. V., Howden, B., Gorrie, C. L., Matanitobua, S., … Crump, J. A., Hill, P. C., & Ussher, J. E. (2023). Molecular and clinical epidemiology of carbapenem resistant Acinetobacter baumannii ST2 in Oceania: A multicountry cohort study. Lancet Regional Health: Western Pacific, 40, 100896. doi: 10.1016/j.lanwpc.2023.100896

Carey, M. E., Dyson, Z. A., Ingle, D. J., Amir, A., Aworh, M. K., Chattaway, M. A., … Crump, J. A., … and the Global Typhoid Genomics Consortium Group Authorship, including Ussher, J. E. (2023). Global diversity and antimicrobial resistance of typhoid fever pathogens: Insights from a meta-analysis of 13,000 Salmonella Typhi genomes. eLIFE, 12, e85867. doi: 10.7554/eLife.85867

Maze, M. J., Nyakunga, G., Sakasaka, P. A., Kilonzo, K. G., Luhwago, E., Chelangwa, M., Crump, J. A., … Thiessen, R., & Rubach, M. P. (2023). Etiologic investigation of patients diagnosed with bacteriologically unconfirmed tuberculosis in Tanzania. American Journal of Tropical Medicine & Hygiene, 109(4), 733-739. doi: 10.4269/ajtmh.23-0023

Shannon, II, F. Q., Bawo, L. L., Crump, J. A., Sharples, K., Egan, R., & Hill, P. C. (2023). Evaluation of Ebola virus disease surveillance system capability to promptly detect a new outbreak in Liberia. BMJ Global Health, 8, e012369. doi: 10.1136/bmjgh-2023-012369

Shimelis, T., Mulu, A., Mengesha, M., Alemu, A., Mihret, A., Tadesse, B. T., … Crump, J. A., … Kaldor, J. M. (2023). Detection of dengue virus infection in children presenting with fever in Hawassa, southern Ethiopia. Scientific Reports, 13, 7997. doi: 10.1038/s41598-023-35143-2

Journal - Research Other

Baker, M., Crump, J., Kvalsvig, A., Geoghegan, J., Tukuitonga, C., Brewerton, M., Kerr, J., & Wilson, N. (2023). Why we need an Aotearoa Centre for Disease Control (CDC). The Briefing, (16 November). Retrieved from https://www.phcc.org.nz/briefing/why-we-need-aotearoa-centre-disease-control-cdc

Moorthy, G. S., Madut, D. B., Kilonzo, K. G., Lwezaula, B. F., Mbwasi, R., Mmbaga, B. T., … Maze, M. J., … Crump, J. A., & Rubach, M. P. (2023). Antibacterial utilization for febrile illnesses and laboratory-confirmed bloodstream infections in Northern Tanzania [Brief report]. Open Forum Infectious Diseases, 10(8), ofad448. doi: 10.1093/ofid/ofad448

Crump, J. A., Vakaoti, P., Moore-Jones, M., Tan, L., Ergler, C. R., Fenton, E., Anderson, E. M. R., Bremer, P. J., Sharples, K. J., Walls, T., … Hadingham, J., Hill, P. C., & Knowles, S. (2023). Health nationalism in Aotearoa New Zealand during COVID-19: Problems for global health equity. Nature Medicine, 29, 1887-1889. doi: 10.1038/s41591-023-02436-y

Crump, J. A., Nyirenda, T. S., Mbuyi Kalonji, L., Phoba, M.-F., Tack, B., Platts-Mills, J. A., … Kariuki, S. M. (2023). Nontyphoidal Salmonella invasive disease: Challenges and solutions. Open Forum Infectious Diseases, 10(Suppl. 1), S32-S37. doi: 10.1093/ofid/ofad020

Villa, S., Carugati, M., Rubach, M. P., Cleaveland, S., Mpagama, S. G., Khan, S. S., … Crump, J. A., & Raviglione, M. C. (2023). 'One Health' aproach to end zoonotic TB. International Journal of Tuberculosis & Lung Disease, 27(2), 101-105. doi: 10.5588/ijtld.22.0393

Conference Contribution - Verbal presentation and other Conference outputs

Crump, J. (2023, November). Health nationalism and New Zealand's COVID-19 response. Verbal presentation at the Otago Global Health Institute (OGHI) 15th Annual Conference: Aotearoa New Zealand's Contribution to Global Health: Global Citizen versus Good Neighbour? Dunedin, New Zealand.

2022

Journal - Research Article

Shimelis, T., Nery, S. V., Schierhout, G., Tadesse, B. T., Dittrich, S., Crump, J. A., & Kaldor, J. M. (2022). Differences in diagnosis, management, and outcomes of acute febrile illness by health facility level in southern Ethiopia. Scientific Reports, 12, 19166. doi: 10.1038/s41598-022-23641-8

de Glanville, W. A., Nyarobi, J. M., Kibona, T., Halliday, J. E. B., Thomas, K. M., Allan, K. J., … Crump, J. A., … Cleaveland, S. (2022). Inter-epidemic Rift Valley fever virus infection incidence and risks for zoonotic spillover in northern Tanzania. PLoS Neglected Tropical Diseases, 16(10), e0010871. doi: 10.1371/journal.pntd.0010871

de Glanville, W. A., Allan, K. J., Nyarobi, J. M., Thomas, K. M., Lankester, F., Kibona, T. J., … Crump, J. A., … Cleaveland, S. (2022). An outbreak of Rift Valley fever among peri-urban dairy cattle in northern Tanzania. Transactions of the Royal Society of Tropical Medicine & Hygiene, 116, 1082-1090. doi: 10.1093/trstmh/trac076

Roberts, T., Dahal, P., Shrestha, P., Schilling, W., Shrestha, R., Ngu, R., … Crump, J. A., … Turner, P. (2022). Antimicrobial resistance patterns in bacteria causing febrile illness in Africa, South Asia, and Southeast Asia: A systematic review of published etiological studies from 1980-2015. International Journal of Infectious Diseases, 122, 612-621. doi: 10.1016/j.ijid.2022.07.018

Thomas, K. M., Kibona, T., Claxton, J. R., de Glanville, W. A., Lankester, F., Amani, N., … Crump, J. A., … Allan, K. J. (2022). Prospective cohort study reveals unexpected aetiologies of livestock abortion in northern Tanzania. Scientific Reports, 12(1), 11669. doi: 10.1038/s41598-022-15517-8

Cutting, E. R., Simmons, R. A., Madut, D. B., Maze, M. J., Kalengo, N. H., Carugati, M., … Crump, J. A., & Rubach, M. P. (2022). Facility-based disease surveillance and Bayesian hierarchical modeling to estimate endemic typhoid fever incidence, Kilimanjaro Region, Tanzania, 2007–2018. PLoS Neglected Tropical Diseases, 16(7), e0010516. doi: 10.1371/journal.pntd.0010516

Manabe, Y. C., Betz, J., Jackson, O., Asoala, V., Bazan, I., Blair, P. W., … Crump, J. A., … Jones, B. W. (2022). Clinical evaluation of the BioFire Global Fever Panel for the identification of malaria, leptospirosis, chikungunya and dengue from whole blood: A prospective, multicentre, cross-sectional diagnostic accuracy study. Lancet Infectious Diseases, 22, 1356-1364. doi: 10.1016/S1473-3099(22)00290-0

Davies, M. R., Duchene, S., Valcanis, M., Jenkins, A. P., Jenney, A., Rosa, V., … Crump, J. A., … Strugnell, R. A. (2022). Genomic epidemiology of Salmonella Typhi in Central Division, Fiji, 2012 to 2016. Lancet Regional Health: Western Pacific, 24, 100488. doi: 10.1016/j.lanwpc.2022.100488

Crump, J. A., & Davies, T. M. (2022). Towards equitable scheduling of global health teleconferences: A spatial exploration of the world's population and health by time zone. BMJ Open, 12, e056696. doi: 10.1136/bmjopen-2021-056696

Shimelis, T., Nery, S. V., Tadesse, B. T., Bartlett, A. W., Belay, F. W., Schierhout, G., … Crump, J. A., & Kaldor, J. M. (2022). Clinical management and outcomes of acute febrile illness in children attending a tertiary hospital in southern Ethiopia. BMC Infectious Diseases, 22, 434. doi: 10.1186/s12879-022-07424-0

Costales, C., Crump, J. A., Mremi, A. R., Amsi, P. T., Kalengo, N. H., Kilonzo, K. G., … Maze, M. J., … Rubach, M. P. (2022). Performance of Xpert Ultra nasopharyngeal swab for identification of tuberculosis deaths in northern Tanzania. Clinical Microbiology & Infection, 28(8), 1150.e1-1150.e6. doi: 10.1016/j.cmi.2022.03.027

Marchello, C. S., Birkhold, M., Crump, J. A., on behalf of the VACC-iNTS consortium collaborators. (2022). Complications and mortality of non-typhoidal salmonella invasive disease: A global systematic review and meta-analysis. Lancet Infectious Diseases, 22, 692-705. doi: 10.1016/S1473-3099(21)00615-0

Pisharody, S., Rubach, M. P., Carugati, M., Nicholson, W. L., Perniciaro, J. L., Biggs, H. M., Maze, M. J., … Crump, J. A. (2022). Incidence estimates of acute Q fever and spotted fever group rickettsioses, Kilimanjaro, Tanzania, from 2007 to 2008 and from 2012 to 2014. American Journal of Tropical Medicine & Hygiene, 106(2), 494-503. doi: 10.4269/ajtmh.20-1036

Oo, W. T., Carr, S. D., Marchello, C. S., San, M. M., Oo, A. T., Oo, K. M., … Crump, J. A. (2022). Point-prevalence surveys of antimicrobial consumption and resistance at a paediatric and an adult tertiary referral hospital in Yangon, Myanmar. Infection Prevention in Practice, 4, 100197. doi: 10.1016/j.infpip.2021.100197

Strobel, A. G., Airs, S., Nguyen, C., Vadei, T. R., Matanitobua, S., Kama, M., … Crump, J. A., … Parry, C. M. (2022). Assessment of rapid diagnostic tests for typhoid diagnosis and assessment of febrile illness outbreaks in Fiji. American Journal of Tropical Medicine & Hygiene, 106(2), 543-549. doi: 10.4269/ajtmh.21-0771

Zadoks, R. N., Barker, G. C., Benschop, J., Allan, K. J., Chaters, G., Cleaveland, S., Crump, J. A., … Thomas, K. M., … French, N. P. (2022). Spread of nontyphoidal Salmonella in the beef supply chain in Northern Tanzania: Sensitivity in a probabilistic model integrating microbiological data and data from stakeholder interviews. Risk Analysis, 42(5), 989-1006. doi: 10.1111/risa.13826

Conference Contribution - Published proceedings: Abstract

Baleivanualala, S. C., Isaia, L., Hill, P., Crump, J. A., & Ussher, J. E. (2022). The silent pandemic in Oceania: Importance of antimicrobial resistance surveillance. In A. Finigan, R. Richards & P. Vakaoti (Eds.), Proceedings of the Pacific Postgraduate Symposium: Pacific Voices XIX. (pp. 7). Dunedin, New Zealand: Pacific Islands Centre, University of Otago. Retrieved from http://hdl.handle.net/10523/16237

Conference Contribution - Poster Presentation (not in published proceedings)

Baleivanualala, S. C., Crump, J., & Ussher, J. (2022, August). The threat of carbapenem resistant Acinetobacter baumannii in Fiji. Poster session presented at the Webster Centre for Infectious Diseases Satellite Meeting: Queenstown Research Week, Queenstown, New Zealand.

2021

Journal - Research Article

Bonnewell, J. P., Rubach, M. P., Madut, D. B., Carugati, M., Maze, M. J., Kilonzo, K. G., … Crump, J. A. (2021). Performance assessment of the universal vital assessment score vs other illness severity scores for predicting risk of in-hospital death among adult febrile inpatients in Northern Tanzania, 2016-2019. JAMA Network Open, 4(12), e2136398. doi: 10.1001/jamanetworkopen.2021.36398

Davis, A., Virhia, J., Buza, J., Crump, J. A., de Glanville, W. A., Halliday, J. E. B., … Sharp, J. E. B. (2021). "He who relies on his brother's property dies poor": The complex narratives of livestock care in Northern Tanzania. Frontiers in Veterinary Science, 8, 749561. doi: 10.3389/fvets.2021.749561

Madut, D. B., Rubach, M. P., Bonnewell, J. P., Cutting, E. R., Carugati, M., Kalengo, N., Maze, M. J., … Crump, J. A. (2021). Trends in fever case management for febrile inpatients in a low malaria incidence setting of Tanzania. Tropical Medicine & International Health, 26(12), 1668-1676. doi: 10.1111/tmi.13683

Bodenham, R. F., Mazeri, S., Cleaveland, S., Crump, J. A., Fasina, F. O., de Glanville, W. A., … Maze, M. J., … Thomas, K. M., … Halliday, J. E. B. (2021). Latent class evaluation of the performance of serological tests for exposure to Brucella spp. in cattle, sheep, and goats in Tanzania. PLoS Neglected Tropical Diseases, 15(8), e0009630. doi: 10.1371/journal.pntd.0009630

Park, S. E., Pham, D. T., Pak, G. D., Panzner, U., Cruz Espinoza, L. M., von Kalckreuth, V., … Crump, J. A., … Marks, F. (2021). The genomic epidemiology of multi-drug resistant invasive non-typhoidal Salmonella in selected sub-Saharan African countries. BMJ Global Health, 6, e005659. doi: 10.1136/bmjgh-2021-005659

Schofield, M. R., Maze, M. J., Crump, J. A., Rubach, M. P., Galloway, R., & Sharples, K. J. (2021). On the robustness of latent class models for diagnostic testing with no gold standard. Statistics in Medicine, 40, 4751-4763. doi: 10.1002/sim.8999

Crump, J. A., Thomas, K. M., Benschop, J., Knox, M. A., Wilkinson, D. A., Midwinter, A. C., … Zadoks, R. N. (2021). Investigating the meat pathway as a source of human nontyphoidal Salmonella bloodstream infections and diarrhea in East Africa. Clinical Infectious Diseases, 73(7), e1570-e1578. doi: 10.1093/cid/ciaa1153

Journal - Research Other

Schofield, M. R., Maze, M. J., Crump, J. A., Rubach, M. P., Galloway, R. L., & Sharples, K. J. (2021). Rejoinder to "On the robustness of latent class models for diagnostic testing with no gold standard". Statistics in Medicine, 40, 4770-4771. doi: 10.1002/sim.9157

Crump, J. A., & Oo, W. T. (2021). Salmonella Typhi Vi polysaccharide conjugate vaccine protects infants and children against typhoid fever. Lancet, 398, 643-644. doi: 10.1016/S0140-6736(21)01340-4

Marchello, C. S., Fiorino, F., Pettini, E., Crump, J. A., & Vacc-iNTS Consortium Collaborators. (2021). Incidence of non-typhoidal Salmonella invasive disease: A systematic review and meta-analysis. Journal of Infection, 83, 523-532. doi: 10.1016/j.jinf.2021.06.029

2020

Journal - Research Article

de Glanville, W. A., Davis, A., Allan, K. J., Buza, J., Claxton, J. R., Crump, J. A., … Cleaveland, S. (2020). Classification and characterisation of livestock production systems in northern Tanzania. PLoS ONE, 15(12), e0229478. doi: 10.1371/journal.pone.0229478

Shimelis, T., Tadesse, B. T., W/Gebriel, F., Crump, J. A., Schierhout, G., Dittrich, S., … Nery, S. V. (2020). Aetiology of acute febrile illness among children attending a tertiary hospital in southern Ethiopia. BMC Infectious Diseases, 20(1), 903. doi: 10.1186/s12879-020-05635-x

Marchello, C. S., Birkhold, M., & Crump, J. A. (2020). Complications and mortality of typhoid fever: A global systematic review and meta-analysis. Journal of Infection, 81, 902-910. doi: 10.1016/j.jinf.2020.10.030

Maze, M. J., Glass Elrod, M., Biggs, H. M., Bonnewell, J., Carugati, M., Hoffmaster, A. R., … Crump, J. A. (2020). Investigation of melioidosis using blood culture and indirect hemagglutination assay serology among patients with fever, Northern Tanzania. American Journal of Tropical Medicine & Hygiene, 103(6), 2510-2514. doi: 10.4269/ajtmh.20-0160

Marchello, C. S., Carr, S. D., & Crump, J. A. (2020). A systematic review on antimicrobial resistance among Salmonella Typhi worldwide. American Journal of Tropical Medicine & Hygiene, 103(6), 2518-2527. doi: 10.4269/ajtmh.20-0258

Shrestha, P., Dahal, P., Ogbonnaa-Njoku, C., Das, D., Stepniewska, K., Thomas, N. V., … Crump, J. A., … Guérin, P. J. (2020). Non-malarial febrile illness: A systematic review of published aetiological studies and case reports from Southern Asia and South-eastern Asia, 1980-2015. BMC Medicine, 18, 299. doi: 10.1186/s12916-020-01745-0

Elven, J., Dahal, P., Ashley, E. A., Thomas, N. V., Shrestha, P., Stepniewska, K., Crump, J. A., … Guérin, P. J. (2020). Non-malarial febrile illness: A systematic review of published aetiological studies and case reports from Africa, 1980-2015. BMC Medicine, 18, 279. doi: 10.1186/s12916-020-01744-1

Allan, K. J., Maze, M. J., Galloway, R. L., Rubach, M. P., Biggs, H. M., Halliday, J. E. B., … Crump, J. A. (2020). Molecular detection and typing of pathogenic Leptospira in febrile patients and phylogenetic comparison with Leptospira detected among animals in Tanzania. American Journal of Tropical Medicine & Hygiene, 103(4), 1427-1434. doi: 10.4269/ajtmh.19-0703

Blum, L. S., Karia, F. P., Msoka, E. F., Oshosen Mwanga, M., Crump, J. A., & Rubach, M. P. (2020). An in-depth examination of reasons for autopsy acceptance and refusal in northern Tanzania. American Journal of Tropical Medicine & Hygiene, 103(4), 1670-1680. doi: 10.4269/ajtmh.20-0029

Stanaway, J. D., Atuhebwe, P. L., Luby, S. P., & Crump, J. A. (2020). Assessing the feasibility of typhoid elimination. Clinical Infectious Diseases, 71(Suppl. 2), S179-S184. doi: 10.1093/cid/ciaa585

Sikorski, M. J., Desai, S. N., Tupua, S., Thomsen, R. E., Han, J., Rambocus, S., … Crump, J. A., … Levine, M. M. (2020). Tenacious endemic typhoid fever in Samoa. Clinical Infectious Diseases, 71(Suppl. 2), S120-S126. doi: 10.1093/cid/ciaa314

Waldman, L., Hrynick, T. A., Benschop, J., Cleaveland, S., Crump, J. A., Davis, M. A., … Thomas, K. M., & Zadoks, R. N. (2020). Meat safety in Northern Tanzania: Inspectors' and slaughter workers' risk perceptions and management. Frontiers in Veterinary Science, 7, 309. doi: 10.3389/fvets.2020.00309

Maze, M. J., Sharples, K. J., Allan, K. J., Biggs, H. M., Cash-Goldwasser, S., Galloway, R. L., … Crump, J. A. (2020). Estimating acute human leptospirosis incidence in northern Tanzania using sentinel site and community behavioural surveillance. Zoonoses & Public Health, 67, 496-505. doi: 10.1111/zph.12712

Morrison, A. L., Lewthwaite, H., Houghton, L. A., Nasak, D. S. J., Sharples, K. J., Brown, P., Crump, J. A., & Jack, S. J. (2020). Child undernutrition in households with microbiologically safer drinking water and ‘improved water’ in Tanna, Vanuatu. Journal of Water & Health, 18(3), 416-429. doi: 10.2166/wh.2020.262

Bodenham, R. F., Lukambagire, A. S., Ashford, R. T., Buza, J. J., Cash-Goldwasser, S., Crump, J. A., … Halliday, J. E. B. (2020). Prevalence and speciation of brucellosis in febrile patients from a pastoralist community of Tanzania. Scientific Reports, 10, 7081. doi: 10.1038/s41598-020-62849-4

Snavely, M. E., Oshosen, M., Msoka, E. F., Karia, F. P., Maze, M. J., Blum, L. S., … Crump, J. A., & Muiruri, C. (2020). "If you have no money, you might die": A qualitative study of sociocultural and health system barriers to care for decedent febrile inpatients in northern Tanzania. American Journal of Tropical Medicine & Hygiene, 103(1), 494-500. doi: 10.4269/ajtmh.19-0822

Prinsen, G., Benschop, J., Cleaveland, S., Crump, J. A., French, N. P., Hrynick, T. A., … Thomas, K. M., … Waldman, L. (2020). Meat safety in Tanzania's value chain: Experiences, explanations and expectations in butcheries and eateries. International Journal of Environmental Research & Public Health, 17(8), 2833. doi: 10.3390/ijerph17082833

Thorn, L. M., Ussher, J. E., Broadbent, R. S., Manning, J. M., Sharples, K. J., & Crump, J. A. (2020). Risk factors for Staphylococcus capitis pulsotype NRCS-A colonisation among premature neonates in the neonatal intensive care unit of a tertiary-care hospital: A retrospective case-control study. Infection Prevention in Practice, 2, 100057. doi: 10.1016/j.infpip.2020.100057

Barr, D. A., Lewis, J. M., Feasey, N., Schutz, C., Kerkhoff, A. D., Jacob, S. T., … Crump, J. A., … Meintjes, G. (2020). Mycobacterium tuberculosis bloodstream infection prevalence, diagnosis, and mortality risk in seriously ill adults with HIV: A systematic review and meta-analysis of individual patient data. Lancet Infectious Diseases, 20, 742-752. doi: 10.1016/S1473-3099(19)30695-4

Chanthavilay, P., Mayxay, M., Xongmixay, P., Roberts, T., Rattanavong, S., Vongsouvath, M., … Crump, J. A. (2020). Estimation of incidence of typhoid and paratyphoid fever in Vientiane, Lao People's Democratic Republic. American Journal of Tropical Medicine & Hygiene, 102(4), 744-748. doi: 10.4269/ajtmh.19-0634

Madut, D. B., Rubach, M. P., Kalengo, N., Carugati, M., Maze, M. J., Morrissey, A. B., … Crump, J. A. (2020). A prospective study of Escherichia coli bloodstream infection among adolescents and adults in northern Tanzania. Transactions of the Royal Society of Tropical Medicine & Hygiene, 114, 378-384. doi: 10.1093/trstmh/trz111

Althaus, T., Lubell, Y., Maro, V. P., Mmbaga, B. T., Lwezaula, B., Halleux, C., … Crump, J. A., & Rubach, M. P. (2020). Sensitivity of C-reactive protein for the identification of patients with laboratory-confirmed bacterial infections in northern Tanzania. Tropical Medicine & International Health, 25(3), 291-300. doi: 10.1111/tmi.13358

Thomas, K. M., de Glanville, W. A., Barker, G. C., Benschop, J., Buza, J. J., Cleaveland, S., … French, N. P., … Crump, J. A. (2020). Prevalence of Campylobacter and Salmonella in African food animals and meat: A systematic review and meta-analysis. International Journal of Food Microbiology, 315, 108382. doi: 10.1016/j.ijfoodmicro.2019.108382

Marchello, C. S., Dale, A. P., Pisharody, S., Rubach, M. P., & Crump, J. A. (2020). A systematic review and meta-analysis of the prevalence of community-onset bloodstream infections among hospitalized patients in Africa and Asia. Antimicrobial Agents & Chemotherapy, 64(1), e01974-19. doi: 10.1128/aac.01974-19

Journal - Research Other

Hopkins, H., Bassat, Q., Chandler, C. I. R., Crump, J. A., Feasey, N. A., Ferrand, R. A., … FIEBRE Consortium, including Ussher, J. E. (2020). Febrile Illness Evaluation in a Broad Range of Endemicities (FIEBRE): Protocol for a multisite prospective observational study of the causes of fever in Africa and Asia. BMJ Open, 10(7), e035632. doi: 10.1136/bmjopen-2019-035632

Halliday, J. E. B., Carugati, M., Snavely, M. E., Allan, K. J., Beamesderfer, J., Ladbury, G. A. F., … Crump, J. A., … Rubach, M. P. (2020). Zoonotic causes of febrile illness in malaria endemic countries: A systematic review. Lancet Infectious Diseases, 20(2), e27-e37. doi: 10.1016/S1473-3099(19)30629-2

Whitcombe, E., Maze, M. J., & Crump, J. A. (2020). Leopold Kirschner, Edward Sayers, and Neil Bruère: The initial descriptions of leptospirosis in New Zealand. Australian & New Zealand Journal of Public Health, 44(1), 5-7. doi: 10.1111/1753-6405.12946

Conference Contribution - Published proceedings: Abstract

Parisi, A., Stanaway, J. D., Sarkar, K., & Crump, J. A. (2020). The global burden of non-typhoidal salmonella invasive disease: A systematic analysis for the Global Burden of Disease Study 2017. International Journal of Infectious Diseases, 101(Suppl. 1), (pp. 341). doi: 10.1016/j.ijid.2020.09.898

Parisi, A., Crump, J. A., Stafford, R., Glass, K., Howden, B. P., & Kirk, M. D. (2020). Increasing incidence of invasive nontyphoidal Salmonella infections in Queensland, Australia, 2007-2016. International Journal of Infectious Diseases, 101(Suppl. 1), (pp. 338-339). doi: 10.1016/j.ijid.2020.09.892

Zhuang, Y., Mah, M. K. Y., Chen, Y., Crump, J. A., Carugati, M., Bonnewell, J. P., … Rubach, M. P. (2020). Respiratory pathogens in a febrile cohort from Tanzania and associated risks for severe disease outcome. International Journal of Infectious Diseases, 101(Suppl. 1), (pp. 367). doi: 10.1016/j.ijid.2020.09.964

Marchello, C. S., Birkhold, M., & Crump, J. A. (2020). Complications and mortality of typhoid fever: A global systematic review and meta-analysis. Proceedings of the Otago Global Health Institute (OGHI) 13th Annual Conference: Shared Humanity and Global Health. (pp. 32-33). Retrieved from https://events.otago.ac.nz/oghiconf2020

Baleivanualala, S. C., Ussher, J., Crump, J., & Wilson, D. (2020). Investigating carbapenem resistant gram negative pathogens in Fiji. Proceedings of the Otago Global Health Institute (OGHI) 13th Annual Conference: Shared Humanity and Global Health. (pp. 30-31). Retrieved from https://events.otago.ac.nz/oghiconf2020

Carr, S. D., Oo, W. T., Mar Oo, K., Marchello, C. S., Sharples, K. J., San, M. M., & Crump, J. A. (2020). A point prevalence survey on antimicrobial consumption and resistance at Yangon Children's Hospital, Yangon, Myanmar. Proceedings of the Otago Global Health Institute (OGHI) 13th Annual Conference: Shared Humanity and Global Health. (pp. 28-29). Retrieved from https://events.otago.ac.nz/oghiconf2020

Conference Contribution - Verbal presentation and other Conference outputs

Costales, C. R., Crump, J. A., Mremi, A. R., Amsi, P. T., Carugati, M., Madut, D., … Rubach, M. P. (2020, November). Performance evaluation of the xpert MTB/RIF ultra assay on postmortem nasopharyngeal specimens to identify suspected and unsuspected tuberculosis deaths among hospitalized patients at autopsy in Northern Tanzania. Verbal presentation at the American Society of Tropical Medicine & Hygiene (ASTMH) 69th Annual Meeting, [Online].

Marchello, C. S., Carr, S. D., & Crump, J. A. (2020, November). A systematic review on antimicrobial resistance among salmonella typhi worldwide. Verbal presentation at the American Society of Tropical Medicine & Hygiene (ASTMH) 69th Annual Meeting, [Online].

Bonnewell, J. P., Madut, D. B., Carugati, M., Maze, M. J., Kilonzo, K. G., Lyamuya, F., … Crump, J. A. (2020, November). Prospective study of the performance of the universal vital assessment score and other severity scores among adult febrile inpatients in Northern Tanzania, 2016-19. Verbal presentation at the American Society of Tropical Medicine & Hygiene (ASTMH) 69th Annual Meeting, [Online].

2019

Journal - Research Article

GBD 2017 Non-Typhoidal Salmonella Invasive Disease Collaborators, including Crump, J. A. (2019). The global burden of non-typhoidal salmonella invasive disease: A systematic analysis for the Global Burden of Disease Study 2017. Lancet Infectious Diseases, 19(12), 1312-1324. doi: 10.1016/s1473-3099(19)30418-9

Rhee, C., Kharod, G. A., Schaad, N., Furukawa, N. W., Vora, N. M., Blaney, D. D., Crump, J. A., & Clarke, K. R. (2019). Global knowledge gaps in acute febrile illness etiologic investigations: A scoping review. PLoS Neglected Tropical Diseases, 13(11), e0007792. doi: 10.1371/journal.pntd.0007792

Toy, T., Pak, G. D., Duc, T. P., Campbell, J. I., El Tayeb, M. A., von Kalckreuth, V., … Crump, J. A., … Marks, F. (2019). Multicountry distribution and characterization of extended-spectrum β-lactamase-associated Gram-negative bacteria from bloodstream infections in sub-Saharan Africa. Clinical Infectious Diseases, 69(Suppl. 6), S449-S458. doi: 10.1093/cid/ciz450

Marchello, C. S., Dale, A. P., Pisharody, S., & Crump, J. A. (2019). Using hospital-based studies of community-onset bloodstream infections to make inferences about typhoid fever incidence. Tropical Medicine & International Health, 24(12), 1369-1383. doi: 10.1111/tmi.13319

Getahun S, A., Parry, C. M., Crump, J. A., Rosa, V., Jenney, A., Naidu, R., … Strugnell, R. A. (2019). A retrospective study of patients with blood culture-confirmed typhoid fever in Fiji during 2014-2015: Epidemiology, clinical features, treatment and outcome. Transactions of the Royal Society of Tropical Medicine & Hygiene, 113, 764-770. doi: 10.1093/trstmh/trz075

Jenkins, A. P., Jupiter, S. D., Jenney, A., Rosa, V., Naucukidi, A., Prasad, N., … Crump, J. A., & Horwitz, P. (2019). Environmental foundations of typhoid fever in the Fijian residential setting. International Journal of Environmental Research & Public Health, 16(13), 2407. doi: 10.3390/ijerph16132407

Hrynick, T. A., Barasa, V., Benschop, J., Cleaveland, S., Crump, J. A., Davis, M., … Thomas, K. M., … Waldman, L. (2019). Street-level diplomacy and local enforcement for meat safety in northern Tanzania: Knowledge, pragmatism and trust. BMC Public Health, 19(1), 863. doi: 10.1186/s12889-019-7067-8

Oo, K. M., Myat, T. O., Htike, W. W., Biswas, A., Hannaway, R. F., Murdoch, D. R., Crump, J. A., & Ussher, J. E. (2019). Molecular mechanisms of antimicrobial resistance and phylogenetic relationships of Salmonella enterica isolates from febrile patients in Yangon, Myanmar. Transactions of the Royal Society of Tropical Medicine & Hygiene, 113, 641-648. doi: 10.1093/trstmh/trz053

Hertz, J. T., Madut, D. B., William, G., Maro, V. P., Crump, J. A., & Rubach, M. P. (2019). Perceptions of stroke and associated health-care-seeking behavior in Northern Tanzania: A community-based study. Neuroepidemiology, 53, 41-47. doi: 10.1159/000499069

GBD 2017 Typhoid and Paratyphoid Collaborators, including Crump, J. A. (2019). The global burden of typhoid and paratyphoid fevers: A systematic analysis for the Global Burden of Disease Study 2017. Lancet Infectious Diseases, 19(4), 369-381. doi: 10.1016/s1473-3099(18)30685-6

Parisi, A., Crump, J. A., Stafford, R., Glass, K., Howden, B. P., & Kirk, M. D. (2019). Increasing incidence of invasive nontyphoidal Salmonella infections in Queensland, Australia, 2007-2016. PLoS Neglected Tropical Diseases, 13(3), e0007187. doi: 10.1371/journal.pntd.0007187

Oo, W. T., Myat, T. O., Htike, W. W., Ussher, J. E., Murdoch, D. R., Lwin, K. T., … Maze, M. J., … Crump, J. A. (2019). Incidence of typhoid and paratyphoid fevers among adolescents and adults in Yangon, Myanmar. Clinical Infectious Diseases, 68(Suppl. 2), S124-S129. doi: 10.1093/cid/ciy1109

Marchello, C. S., Hong, C. Y., & Crump, J. A. (2019). Global typhoid fever incidence: A systematic review and meta-analysis. Clinical Infectious Diseases, 68(Suppl. 2), S105-S116. doi: 10.1093/cid/ciy1094

Msemo, O. A., Mbwana, J., Mahende, C., Malabeja, A., Gesase, S., Crump, J. A., … Lusingu, J. P. A. (2019). Epidemiology and antimicrobial susceptibility of Salmonella enterica bloodstream isolates among febrile children in a rural district in Northeastern Tanzania: A cross-sectional study. Clinical Infectious Diseases, 68(Suppl. 2), S177-S182. doi: 10.1093/cid/ciy1126

Hertz, J. T., Madut, D. B., Tesha, R. A., William, G., Simmons, R. A., Galson, S. W., … Crump, J. A., & Rubach, M. P. (2019). Perceptions of chest pain and healthcare seeking behavior for chest pain in northern Tanzania: A community-based survey. PLoS ONE, 14(2), e0212139. doi: 10.1371/journal.pone.0212139

Hertz, J. T., Madut, D. B., Tesha, R. A., William, G., Simmons, R. A., Galson, S. W., … Crump, J. A., & Rubach, M. P. (2019). Knowledge of myocardial infarction symptoms and perceptions of self-risk in Tanzania. American Heart Journal, 210, 69-74. doi: 10.1016/j.ahj.2019.01.003

Hertz, J. T., Madut, D. B., Tesha, R. A., William, G., Simmons, R. A., Galson, S. W., … Crump, J. A., & Rubach, M. P. (2019). Self-medication with non-prescribed pharmaceutical agents in an area of low malaria transmission in northern Tanzania: A community-based survey. Transactions of the Royal Society of Tropical Medicine & Hygiene, 113, 183-188. doi: 10.1093/trstmh/try138

Maze, M. J., Sharples, K. J., Allan, K. J., Rubach, M. P., & Crump, J. A. (2019). Diagnostic accuracy of leptospirosis whole-cell lateral flow assays: A systematic review and meta-analysis. Clinical Microbiology & Infection, 25, 437-444. doi: 10.1016/j.cmi.2018.11.014

Journal - Research Other

Park, S. E., Toy, T., Cruz Espinoza, L. M., Panzner, U., Mogeni, O. D., Im, J., … Crump, J. A., … Marks, F. (2019). The Severe Typhoid Fever in Africa program: Study design and methodology to assess disease severity, host immunity, and carriage associated with invasive salmonellosis. Clinical Infectious Diseases, 69(Suppl. 6), S422-S434. doi: 10.1093/cid/ciz715

Carugati, M., Kilonzo, K. G., & Crump, J. A. (2019). Fever, bacterial zoonoses, and One Health in sub-Saharan Africa. Clinical Medicine, 19(5), 375-380. doi: 10.7861/clinmed.2019-0180

Crump, J. A. (2019). Progress in typhoid fever epidemiology. Clinical Infectious Diseases, 68(Suppl. 1), S4-S9. doi: 10.1093/cid/ciy846

Conference Contribution - Published proceedings: Abstract

Appiah, G. D., Chung, A., Bentsi-Enchill, A., Kim, S., Crump, J. A., Mogasale, V., … Mintz, E. D. (2019). Typhoid outbreaks, 1989-2018: Implications for prevention and control. American Journal of Tropical Medicine & Hygiene, 101(5 Suppl.), (pp. 333). doi: 10.4269/ajtmh.abstract2019

Cutting, E. R., Madut, D. B., Maze, M. J., Kalengo, N. H., Carugati, M., Mmbaga, B. T., … Crump, J. A. (2019). Endemic typhoid incidence, Kilimanjaro region, Tanzania, 2007-2018. American Journal of Tropical Medicine & Hygiene, 101(5 Suppl.), (pp. 331). doi: 10.4269/ajtmh.abstract2019

Maze, M. J., Glass Elrod, M., Hoffmaster, A., Biggs, H. M., Sakasaka, P., Saganda, W., … Crump, J. A. (2019). Melioidosis and serological evidence of exposure to Burkholderia pseudomallei among patients with fever, Northern Tanzania. American Journal of Tropical Medicine & Hygiene, 101(5 Suppl.), (pp. 145). doi: 10.4269/ajtmh.abstract2019

Marchello, C. S., Carr, S., & Crump, J. A. (2019). Global antimicrobial resistance in Salmonella Typhi: A systematic review. Proceedings of the Otago Global Health Institute (OGHI) 12th Annual Conference: Global Health in the Era of Climate Change. (pp. 13). Retrieved from https://www.otago.ac.nz/global-health

Maze, M. J., Glass Elrod, M., Hoffmaster, A., Biggs, H. M., Sakasaka, P., Saganda, W., … Crump, J. A. (2019). Melioidosis and serological evidence of exposure to Burkholderia pseudomallei among patients with fever, Northern Tanzania. Proceedings of the Otago Global Health Institute (OGHI) 12th Annual Conference: Global Health in the Era of Climate Change. (pp. 3-4). Retrieved from https://www.otago.ac.nz/global-health

Hopkins, H., Bassat, Q., Chandler, C. I. R., Crump, J. A., Feasey, N. A., Ferrand, R. A., … Mabey, D. C. W. (2019). FIEBRE (febrile illness evaluation in a broad range of endemicities): A multi-site prospective observational study of causes of fever in sub-Saharan Africa and Southeast Asia. Transactions of the Royal Society of Tropical Medicine & Hygiene, 113(Suppl. 1), (pp. S10-S11). doi: 10.1093/trstmh/trz094

Conference Contribution - Verbal presentation and other Conference outputs

Crump, J. A. (2019, November). A global perspective on new data on typhoid fever epidemiology [Symposium: A new tool for an old disease: Using the latest data to inform typhoid conjugate vaccine implementation]. Verbal presentation at the 68th Annual Meeting of the American Society of Tropical Medicine & Hygiene (ASTMH), National Harbour, MD.

Thomas, K. M., Barker, G. C., Benschop, J., Buza, J. J., Cleaveland, S., Davis, M. A., French, N. P., … Crump, J. A. (2019, December). Investigating non-typhoidal Salmonella in East Africa: A One Health approach. Invited presentation at the 5th One Health Aotearoa (OHA) Symposium, Wellington, New Zealand.

2018

Chapter in Book - Research

DeCamp, M., Crump, J. A., Sugarman, J., Todd, T., Walker, X., & Ali, A. (2018). Existing and emerging ethical standards in global health education. In A. N. Arya & J. Evert (Eds.), Global health experiential education: From theory to practice. (pp. 114-131). Abingdon, UK: Routledge.

Journal - Research Article

Park, S. E., Pham, D. T., Bionett, C., Wong, V. K., Pak, G. D., Panzner, U., … Crump, J. A., … Baker, S. (2018). The phylogeography and incidence of multi-drug resistant typhoid fever in sub-Saharan Africa. Nature Communications, 9, 5904. doi: 10.1038/s41467-018-07370-z

GBD 2017 DALYs and HALE Collaborators, including Crump, J. A. (2018). Global, regional, and national disability-adjusted life-years (DALYs) for 359 diseases and injuries and healthy life expectancy (HALE) for 195 countries and territories, 1990-2017: A systematic analysis for the Global Burden of Disease Study 2017. Lancet, 392(10159), 1859-1922. doi: 10.1016/s0140-6736(18)32335-3

GBD 2017 Disease and Injury Incidence and Prevalence Collaborators, including Crump, J. A., & Ranta, A. (2018). Global, regional, and national incidence, prevalence, and years lived with disability for 354 diseases and injuries for 195 countries and territories, 1990-2017: A systematic analysis for the Global Burden of Disease Study 2017. Lancet, 392(10159), 1789-1858. doi: 10.1016/s0140-6736(18)32279-7

Carugati, M., Zhang, H. L., Kilonzo, K. G., Maze, M. J., Maro, V. P., Rubach, M. P., & Crump, J. A. (2018). Predicting mortality for adolescent and adult patients with fever in resource-limited settings. American Journal of Tropical Medicine & Hygiene, 99(5), 1246-1254. doi: 10.4269/ajtmh.17-0682

Bhutta, Z. A., Gaffey, M., Crump, J. A., Steele, D., Breiman, R. F., Mintz, E. D., … Levine, M. M. (2018). Typhoid fever: Way forward. American Journal of Tropical Medicine & Hygiene, 99(3, Suppl.), 89-96. doi: 10.4269/ajtmh.18-0111

Prasad, N., Jenkins, A. P., Naucukidi, L., Rosa, V., Sahu-Khan, A., Kama, M., … Jack, S. J., Saha, D., … Crump, J. A. (2018). Epidemiology and risk factors for typhoid fever in Central Division, Fiji, 2014-2017: A case-control study. PLoS Neglected Tropical Diseases, 12(6), e0006571. doi: 10.1371/journal.pntd.0006571

Allan, K. J., Halliday, J. E. B., Moseley, M., Carter, R. W., Ahmed, A., Goris, M. G. A., … Crump, J. A., & Cleaveland, S. (2018). Assessment of animal hosts of pathogenic Leptospira in northern Tanzania. PLoS Neglected Tropical Diseases, 12(6), e0006444. doi: 10.1371/journal.pntd.0006444

Maze, M. J., Cash-Goldwasser, S., Rubach, M. P., Biggs, H. M., Galloway, R. L., Sharples, K. J., … Crump, J. A. (2018). Risk factors for human acute leptospirosis in northern Tanzania. PLoS Neglected Tropical Diseases, 12(6), e0006372. doi: 10.1371/journal.pntd.0006372

GBD 2016 Healthcare Access and Quality Collaborators, including Crump, J. A. (2018). Measuring performance on the Healthcare Access and Quality Index for 195 countries and territories and selected subnational locations: A systematic analysis from the Global Burden of Disease Study 2016. Lancet, 391(10136), 2236-2271. doi: 10.1016/S0140-6736(18)30994-2

Jeon, H. J., Pak, G. D., Im, J., Owusu-Dabo, E., Adu-Sarkodie, Y., Sow, A. G., … Crump, J. A., … Marks, F. (2018). Determining the best immunization strategy for protecting African children against invasive salmonella disease. Clinical Infectious Diseases, 67(12), 1824-1830. doi: 10.1093/cid/ciy386

Saad, N. J., Lynch, V. D., Antillón, M., Yang, C., Crump, J. A., & Pitzer, V. E. (2018). Seasonal dynamics of typhoid and paratyphoid fever. Scientific Reports, 8(1), 6870. doi: 10.1038/s41598-018-25234-w

Carugati, M., Biggs, H. M., Maze, M. J., Stoddard, R. A., Cash-Goldwasser, S., Hertz, J. T., … Crump, J. A. (2018). Incidence of human brucellosis in the Kilimanjaro region of Tanzania in the periods 2007-2008 and 2012-2014. Transactions of the Royal Society of Tropical Medicine & Hygiene, 112(3), 136-143. doi: 10.1093/trstmh/try033

Parisi, A., Crump, J. A., Glass, K., Howden, B. P., Furuya-Kanamori, L., Vilkins, S., … Kirk, M. D. (2018). Health outcomes from multidrug-resistant Salmonella infections in high-income countries: A systematic review and meta-analysis. Foodborne Pathogens & Disease, 15(7), 428-436. doi: 10.1089/fpd.2017.2403

Shrestha, P., Roberts, T., Homsana, A., Myat, T. O., Crump, J. A., Lubell, Y., & Newton, P. N. (2018). Febrile illness in Asia: Gaps in epidemiology, diagnosis, management for informing health policy. Clinical Microbiology & Infection, 24(8), 815-826. doi: 10.1016/j.cmi.2018.03.028

Snavely, M. E., Maze, M. J., Muiruri, C., Ngowi, L., Mboya, F., Beamesderfer, J., … Crump, J. A., … Rubach, M. P. (2018). Sociocultural and health system factors associated with mortality among febrile inpatients in Tanzania: A prospective social biopsy cohort study. BMJ Global Health, 3(1), e000507. doi: 10.1136/bmjgh-2017-000507

Cash-Goldwasser, S., Maze, M. J., Rubach, M. P., Biggs, H. M., Stoddard, R. A., Sharples, K. J., … Crump, J. A. (2018). Risk factors for human brucellosis in Northern Tanzania. American Journal of Tropical Medicine & Hygiene, 98(2), 598-606. doi: 10.4269/ajtmh.17-0125

Journal - Research Other

Radhakrishnan, A., Als, D., Mintz, E. D., Crump, J. A., Stanaway, J., Breiman, R. F., & Bhutta, Z. A. (2018). Introductory article on global burden and epidemiology of typhoid fever. American Journal of Tropical Medicine & Hygiene, 99(Suppl. 3), 4-9. doi: 10.4269/ajtmh.18-0032

Maze, M. J., Bassat, Q., Feasey, N. A., Mandomando, I., Musicha, P., & Crump, J. A. (2018). The epidemiology of febrile illness in sub-Saharan Africa: implications for diagnosis and management. Clinical Microbiology & Infection, 24(8), 808-814. doi: 10.1016/j.cmi.2018.02.011

Aung, H. L., Tun, T., Nyunt, W. W., Fong, Y., Crump, J. A., Thinn, K. K., … Cook, G. M. (2018). Association between anti-tuberculosis drug resistance-conferring mutations and treatment outcomes in Myanmar. Infectious Diseases, 50(5), 388-390. doi: 10.1080/23744235.2017.1404632

Conference Contribution - Published proceedings: Abstract

Thandar Oo, W., Ohn Myat, T., Mar Oo, K., Htike, W. W., Ussher, J. E., Murdoch, D. R., … Maze, M. J., … Crump, J. A. (2018). Incidence of typhoid and paratyphoid fevers among adolescents and adults in Yangon, Myanmar. Proceedings of the Otago Global Health Institute (OGHI) 11th Annual Conference. (pp. 17-18). Retrieved from https://www.otago.ac.nz/global-health/annual-conference

Mar Oo, K., Ohn Myat, T., Biswas, A., Hannaway, R. F., Htike, W. W., Murdoch, D. R., Crump, J. A., & Ussher, J. E. (2018). Molecular mechanisms of antimicrobial resistance and phylogenetic relationship of Salmonella enterica serovars typhi and paratyphi A from febrile patients in Yangon, Myanmar. Proceedings of the Otago Global Health Institute (OGHI) 11th Annual Conference. (pp. 17). Retrieved from https://www.otago.ac.nz/global-health/annual-conference

Marchello, C. S., Hong, C. Y., & Crump, J. A. (2018). Global typhoid fever incidence: A systematic review and meta-analysis. Proceedings of the Otago Global Health Institute (OGHI) 11th Annual Conference. (pp. 16-17). Retrieved from https://www.otago.ac.nz/global-health/annual-conference

Mmbaga, B. T., Mremi, A., Amsi, P., Emmanuel, M., Kalengo, N., Carugati, M., … Crump, J. A., … Rubach, M. P. (2018). Etiologies of gastro-intestinal perforations in Kilimanjaro, Tanzania: Prospective hospital-based sentinel surveillance. American Journal of Tropical Medicine & Hygiene, 99(4, Suppl.), (pp. 163). doi: 10.4269/ajtmh.abstract2018

Maze, M. J., Sharples, K. J., Rubach, M. P., & Crump, J. A. (2018). Systematic review and meta-analysis of the diagnostic accuracy of leptospirosis lateral flow IGM point-of-care tests. American Journal of Tropical Medicine & Hygiene, 99(4, Suppl.), (pp. 156). doi: 10.4269/ajtmh.abstract2018

Maze, M. J., Sharples, K. J., Allan, K. J., Biggs, H. M., Cash-Goldwasser, S., Galloway, R. L., … Crump, J. A. (2018). Using behavioral and sentinel site surveillance to estimate acute leptospirosis period prevalence in Northern Tanzania. American Journal of Tropical Medicine & Hygiene, 99(4, Suppl.), (pp. 408). doi: 10.4269/ajtmh.abstract2018

Conference Contribution - Verbal presentation and other Conference outputs

Maze, M. J., Allan, K. J., de Glanville, W. A., Halliday, J., Kazwala, R., Kibona, T., … Crump, J. A. (2018, December). Zoonotic infections and inequality: Leptospirosis in Tanzania. Invited presentation at the 4th One Health Aotearoa (OHA) Symposium, Wellington, New Zealand.

2017

Chapter in Book - Research

Crump, J. A., Newton, P. N., Baird, S. J., & Lubell, Y. (2017). Febrile illness in adolescents and adults. In K. K. Holmes, S. Bertozzi, B. R. Bloom & P. Jha (Eds.), Disease control priorities: Major infectious diseases (Vol. 6). (3rd ed.) (pp. 365-384). Washington, DC: World Bank. doi: 10.1596/978-1-4648-0524-0_ch14

Crump, J. A., & Wain, J. (2017). Salmonella. In S. R. Quah & W. Cockerham (Eds.), International encyclopedia of public health (Vol. 6). (2nd ed.) (pp. 425-433). Elsevier. doi: 10.1016/B978-0-12-803678-5.00394-5

Journal - Research Article

Moore, C. C., Hazard, R., Saulters, K. J., Ainsworth, J., Adakun, S. A., Amir, A., … Crump, J. A., … Barnes, L. E. (2017). Derivation and validation of a universal vital assessment (UVA) score: A tool for predicting mortality in adult hospitalised patients in sub-Saharan Africa. BMJ Global Health, 2(2), e000344. doi: 10.1136/bmjgh-2017-000344

GBD 2016 Mortality Collaborators, including Crump, J. A., & Poulton, R. G. (2017). Global, regional, and national under-5 mortality, adult mortality, age-specific mortality, and life expectancy, 1970-2016: A systematic analysis for the Global Burden of Disease Study 2016. Lancet, 390(10100), 1084-1150. doi: 10.1016/S0140-6736(17)31833-0

GBD 2016 Disease and Injury Incidence and Prevalence Collaborators, including Crump, J. A., & Poulton, R. G. (2017). Global, regional, and national incidence, prevalence, and years lived with disability for 328 diseases and injuries for 195 countries, 1990-2016: A systematic analysis for the Global Burden of Disease Study 2016. Lancet, 390(10100), 1211-1259. doi: 10.1016/S0140-6736(17)32154-2

GBD 2016 DALYs and HALE Collaborators, including Crump, J. A., & Poulton, R. G. (2017). Global, regional, and national disability-adjusted life-years (DALYs) for 333 diseases and injuries and healthy life expectancy (HALE) for 195 countries and territories, 1990-2016: A systematic analysis for the Global Burden of Disease Study 2016. Lancet, 390(10100), 1260-1344. doi: 10.1016/S0140-6736(17)32130-X

GBD 2016 Risk Factors Collaborators, including Crump, J. A., & Poulton, R. G. (2017). Global, regional, and national comparative risk assessment of 84 behavioural, environmental and occupational, and metabolic risks or clusters of risks, 1990-2016: A systematic analysis for the Global Burden of Disease Study 2016. Lancet, 390(10100), 1345-1422. doi: 10.1016/S0140-6736(17)32366-8

GBD 2016 SDG Collaborators, including Bhala, N., & Crump, J. A. (2017). Measuring progress and projecting attainment on the basis of past trends of the health-related Sustainable Development Goals in 188 countries: An analysis from the Global Burden of Disease Study 2016. Lancet, 390(10100), 1423-1459. doi: 10.1016/S0140-6736(17)32336-X

Bonell, A., Lubell, Y., Newton, P. N., Crump, J. A., & Paris, D. H. (2017). Estimating the burden of scrub typhus: A systematic review. PLoS Neglected Tropical Diseases, 11(9), e0005838. doi: 10.1371/journal.pntd.0005838

GBD 2015 Healthcare Access and Quality Collaborators, including Crump, J. A. (2017). Healthcare Access and Quality Index based on mortality from causes amenable to personal health care in 195 countries and territories, 1990-2015: A novel analysis from the Global Burden of Disease Study 2015. Lancet, 390(10091), 231-266. doi: 10.1016/s0140-6736(17)30818-8

Cleaveland, S., Sharp, J., Abela-Ridder, B., Allan, K. J., Buza, J., Crump, J. A., … Halliday, J. E. B. (2017). One Health contributions towards more effective and equitable approaches to health in low- and middle-income countries. Philosophical Transactions of the Royal Society B, 372(1725), 20160168. doi: 10.1098/rstb.2016.0168

Myat, T. O., Hannaway, R. F., Zin, K. N., Htike, W. W., Win, K. K., Crump, J. A., Murdoch, D. R., & Ussher, J. E. (2017). ESBL- and carbapenemase-producing Enterobacteriaceae in patients with bacteremia, Yangon, Myanmar, 2014. Emerging Infectious Diseases, 23(5), 857-859. doi: 10.3201/eid2305.161100

The Global Burden of Disease Child and Adolescent Health Collaboration, including Crump, J. (2017). Child and adolescent health from 1990 to 2015: Findings from the global burden of diseases, injuries, and risk factors 2015 study. JAMA Pediatrics, 171(6), 573-592. doi: 10.1001/jamapediatrics.2017.0250

Marks, F., von Kalckreuth, V., Aaby, P., Adu-Sarkodie, Y., El Tayeb, M. A., Ali, M., … Crump, J. A., … Wierzba, T. F. (2017). Incidence of invasive salmonella disease in sub-Saharan Africa: A multicentre population-based surveillance study. Lancet Global Health, 5(3), e310-e323. doi: 10.1016/s2214-109x(17)30022-0

Journal - Research Other

Shane, A. L., Mody, R. K., Crump, J. A., Tarr, P. I., Steiner, T. S., Kotloff, K., … Pickering, L. K. (2017). 2017 Infectious Diseases Society of America clinical practice guidelines for the diagnosis and management of infectious diarrhea. Clinical Infectious Diseases, 65(12), e45-e80. doi: 10.1093/cid/cix669

Tun, T., Aye, K. S., Nyunt, W. W., Crump, J. A., Nakajima, C., Suzuki, Y., … Cook, G. M., & Aung, H. L. (2017). Genotypic diversity of Mycobacterium tuberculosis strains in Myanmar. Infectious Diseases, 49(3), 237-239. doi: 10.1080/23744235.2016.1231419

Conference Contribution - Published proceedings: Abstract

Maze, M. J., Rubach, M. P., Sakasaka, P., Swai, R., Afwamba, I., Galloway, R. L., … Schofield, M., Sharples, K., & Crump, J. A. (2017). Evaluation of performance of three commercially available leptospirosis IgM point-of-care tests to diagnose acute leptospirosis among patients with fever in northern Tanzania. Proceedings of the 10th International Leptospirosis Society Meeting. (pp. 209-210). Retrieved from http://www.ils2017.org.nz/home.html/

Maze, M. J., Galloway, R. L., Rubach, M. P., Allan, K. J., Biggs, H. M., Halliday, J. E. B., … Crump, J. A. (2017). Three species of Leptospira detected in blood of patients with fever in northern Tanzania. Proceedings of the 10th International Leptospirosis Society Meeting. (pp. 125-126). Retrieved from http://www.ils2017.org.nz/home.html

Maze, M. J., Cash-Goldwasser, S., Rubach, M. R., Allan, K. J., Carugati, M., Cossic, B., … Gallagher, S., German, R., … Crump, J. A. (2017). The global distribution and host range of Leptospira species and serovars. Proceedings of the 10th International Leptospirosis Society Meeting. (pp. 126-127). Retrieved from http://www.ils2017.org.nz/home.html

Maze, M. J., Shirima, G. M., Lukambagire, A.-H., Bodenham, R. F., Rubach, M. P., Cash-Goldwasser, S., … Crump, J. A., & Halliday, J. E. B. (2017). Leptospirosis among febrile outpatients attending hospital in a pastoral area in northern Tanzania. Proceedings of the 10th International Leptospirosis Society Meeting. (pp. 200-201). Retrieved from http://www.ils2017.org.nz/home.html

Snavely, M., Maze, M. J., Muiruri, C., Ngowi, L., Mboya, F., Beamesderfer, J., … Crump, J. A., … Rubach, M. P. (2017). Assessing the non-biologic contributors to mortality among inpatients with febrile illness in Tanzania: A prospective cohort social biopsy study. American Journal of Tropical Medicine & Hygiene, 97(5, Suppl.), (pp. 30). doi: 10.4269/ajtmh.abstract2017

Carugati, M., Zhang, H. L., Maro, V. P., Rubach, M. P., & Crump, J. A. (2017). Predicting mortality for adolescent and adult patients with fever in resource-limited settings. American Journal of Tropical Medicine & Hygiene, 97(5, Suppl.), (pp. 154). doi: 10.4269/ajtmh.abstract2017

Maze, M. J., Cash-Goldwasser, S., Rubach, M. R., Allan, K. J., Carugati, M., Cossic, B., … Gallagher, S., German, R., … Crump, J. A. (2017). The global distribution and host range of Leptospira species and serovars. Proceedings of the Australasian Society for Infectious Diseases (ASID) New Zealand Branch Annual Scientific Meeting. Retrieved from https://www.asid.net.au

Thomas, K. M., Zadoks, R. N., Barker, G. C., Benschop, J., Buza, J., Cleaveland, S., … Crump, J. A. (2017). Understanding Campylobacter and non-typhoidal Salmonella in the livestock and poultry meat pathways in Kilimanjaro and Arusha regions, Tanzania, 2015-2017. Otago Global Health Institute (OGHI) 10th Annual Conference. (pp. 17-18). Retrieved from http://www.otago.ac.nz/global-health/annual-conference

Myat, T. O., Oo, K. M., Oo, W. T., Mone, H. K., Htike, W. W., Robinson, M., … Biswas, A., Hannaway, R. F., Ussher, J. E., Murdoch, D. R., & Crump, J. A. (2017). Bacterial causes of febrile illness among adult patients admitted to Yangon General Hospital, Yangon, Myanmar. Otago Global Health Institute (OGHI) 10th Annual Conference. (pp. 15-16). Retrieved from http://www.otago.ac.nz/global-health/annual-conference

Snavely, M. E., Maze, M. J., Muiruri, C., Ngowi, L., Mboya, F., Beamesderfer, J., … Crump, J. A., … Rubach, M. P. (2017). Social and health system determinants of mortality among febrile inpatients in Tanzania: A prospective social biopsy cohort study. Proceedings of the Otago Global Health Institute (OGHI) 10th Annual Conference. (pp. 8). Retrieved from http://www.otago.ac.nz/global-health/annual-conference

Parisi, A., Crump, J. A., Glass, K., Howden, B. P., Furuya-Kanamori, L., Vilkins, S., & Kirk, M. D. (2017). Health outcomes from multi-drug resistant Salmonella infections in high-income countries. Proceedings of the Australasian Epidemiological Association (AEA) 30th Anniversary Meeting. Retrieved from https://aea.asn.au

Dittrich, S., Tadesse, B. T., Moussy, F., Chua, A., Zorzet, A., Tängdén, T., … Crump, J. A., … González, I. J. (2017). Target product profile for a diagnostic assay to differentiate between bacterial and non-bacterial infections to guide antimicrobial use in resource-limited settings: An expert consensus. American Journal of Tropical Medicine & Hygiene, 95(5, Suppl.), (pp. 527). doi: 10.4269/ajtmh.abstract2016

Cash-Goldwasser, S., Maze, M. J., Rubach, M. P., Biggs, H. M., Stoddard, R. A., Sharples, K. J., … Crump, J. A. (2017). Risk factors for acute human Brucellosis in Northern Tanzania. American Journal of Tropical Medicine & Hygiene, 95(5, Suppl.), (pp. 168-169). doi: 10.4269/ajtmh.abstract2016

Maze, M. J., Cash-Goldwasser, S., Biggs, H. M., Rubach, M. P., Galloway, R. L., Sharples, K. J., … Crump, J. A. (2017). Risk factors for acute Leptospirosis in Northern Tanzania. American Journal of Tropical Medicine & Hygiene, 95(5, Suppl.), (pp. 201). doi: 10.4269/ajtmh.abstract2016

Maze, M. J., Biggs, H. M., Rubach, M. P., Galloway, R. L., Cash-Goldwasser, S., Allan, K. J., … Crump, J. A. (2017). Comparison of the incidence of acute leptospirosis in the Kilimanjaro region of Tanzania between 2007-08 and 2012-14. American Journal of Tropical Medicine & Hygiene, 95(5, Suppl.), (pp. 405-406). doi: 10.4269/ajtmh.abstract2016

Thomas, K. M., Zadoks, R. N., Barker, G. C., Benschop, J., Buza, J., Cleaveland, S., … Crump, J. A. (2017). Contribution of food animals to human non-typhoidal Salmonella disease in East Africa. Proceedings of the 10th International Conference on Typhoid & Other Invasive Salmonelloses. Retrieved from http://www.coalitionagainsttyphoid.org/typhoid-conference/conference-information/abstract-poster-presenters/

Conference Contribution - Verbal presentation and other Conference outputs

Crump, J. (2017, May). Typhoid disease burden. Verbal presentation at the 35th Annual Meeting of the European Society for Paediatric Infectious Diseases (ESPID), Madrid, Spain.

2016

Chapter in Book - Research

Crump, J. A. (2016). Salmonella infections (including enteric fever). In L. Goldman & A. I. Schafer (Eds.), Goldman-Cecil medicine. (25th ed.) Philadelphia, PA: Elsevier Saunders.

Journal - Research Article

Wong, V. K., Baker, S., Connor, T. R., Pickard, D., Page, A. J., Dave, J., … International Typhoid Consortium, including Crump, J. A. (2016). An extended genotyping framework for Salmonella enterica serovar Typhi, the cause of human typhoid. Nature Communications, 7, 12827. doi: 10.1038/ncomms12827

Sowerby, S. J., Crump, J. A., Johnstone, M. C., Krause, K. L., & Hill, P. C. (2016). Smartphone microscopy of parasite eggs accumulated into a single field of view. American Journal of Tropical Medicine & Hygiene, 94(1), 227-230. doi: 10.4269/ajtmh.15-0427

Maze, M. J., Biggs, H. M., Rubach, M. P., Galloway, R. L., Cash-Goldwasser, S., Allan, K. J., … Crump, J. A. (2016). Comparison of the estimated incidence of acute leptospirosis in the Kilimanjaro region of Tanzania between 2007-08 and 2012-14. PLoS Neglected Tropical Diseases, 10(12), e0005165. doi: 10.1371/journal.pntd.0005165

International Typhoid Consortium, Wong, V. K., Holt, K. E., Okoro, C., Baker, S., Pickard, D. J., … and also Crump, J. A. (2016). Molecular surveillance identifies multiple transmissions of typhoid in West Africa. PLoS Neglected Tropical Diseases, 10(9), e0004781. doi: 10.1371/journal.pntd.0004781

Aung, H. L., Tun, T., Permina, E., Nyunt, W. W., Aung, S. T., Thinn, K. K., Crump, J. A., & Cook, G. M. (2016). Draft genome sequences of two drug-resistant Mycobacterium tuberculosis isolates from Myanmar. Genome Announcements, 4(5), e00850-16. doi: 10.1128/genomeA.00850-16

Zhang, H. L., Omondi, M. W., Musyoka, A. M., Afwamba, I. A., Swai, R. P., Karia, F. P., … Crump, J. A., & Rubach, M. P. (2016). Challenges of maintaining good clinical laboratory practices in low-resource settings: A health program evaluation framework case study from East Africa. American Journal of Clinical Pathology, 146(2), 199-206. doi: 10.1093/ajcp/aqw083

Hertz, J. T., Lyaruu, L. J., Ooi, E. E., Mosha, F. W., & Crump, J. A. (2016). Distribution of Aedes mosquitoes in the Kilimanjaro Region of northern Tanzania. Pathogens & Global Health, 110(3), 108-112. doi: 10.1080/20477724.2016.1182719

Pavllinac, P. B., Lokken, E. M., Watson, J. L., Richardson, B. A., Crump, J. A., & John-Stewart, G. C. (2016). Mycobacterium tuberculosis bacteremia in adults and children: A systematic review and meta-analysis. International Journal of Tuberculosis & Lung Disease, 20(7), 895-902. doi: 10.5588/ijtld.15.0773

Aung, H. L., Tun, T., Moradigaravand, D., Köser, C. U., Nyunt, W. W., Aung, S. T., … Crump, J. A., … Cook, G. M., & Hill, P. C. (2016). Whole-genome sequencing of multidrug-resistant Mycobacterium tuberculosis isolates from Myanmar. Journal of Global Antimicrobial Resistance, 6, 113-117. doi: 10.1016/j.jgar.2016.04.008

Al-Emran, H. M., Eibach, D., Krumkamp, R., Ali, M., Baker, S., Biggs, H. M., … Crump, J. A., … Marks, F. (2016). A multicountry molecular analysis of Salmonella enterica serovar typhi with reduced susceptibility to ciprofloxacin in Sub-Saharan Africa. Clinical Infectious Diseases, 62(Suppl. 1), S42-S46. doi: 10.1093/cid/civ788

Al-Emran, H. M., Krumkamp, R., Dekker, D. M., Eibach, D., Aaby, P., Adu-Sarkodie, Y., … Crump, J. A., … Marks, F. (2016). Validation and identification of invasive Salmonella serotypes in Sub-Saharan Africa by multiplex polymerase chain reaction. Clinical Infectious Diseases, 62(Suppl. 1), S80-S82. doi: 10.1093/cid/civ782

Zhang, H. L., Mnzava, K. W., Mitchell, S. T., Melubo, M. L., Kibona, T. J., Cleaveland, S., … Crump, J. A., … Halliday, J. E. B. (2016). Mixed methods survey of zoonotic disease awareness and practice among animal and human healthcare providers in Moshi, Tanzania. PLoS Neglected Tropical Diseases, 10(3), e0004476. doi: 10.1371/journal.pntd.0004476

Park, S. E., Pak, G. D., Aaby, P., Adu-Sarkodie, Y., Ali, M., Aseffa, A., … Crump, J. A., … Marks, F. (2016). The relationship between invasive nontyphoidal Salmonella disease, other bacterial bloodstream infections, and malaria in Sub-Saharan Africa. Clinical Infectious Diseases, 62(Suppl. 1), S23-S31. doi: 10.1093/cid/civ893

Panzner, U., Pak, G. D., Aaby, P., Adu-Sarkodie, Y., Ali, M., Aseffa, A., … Crump, J. A., … Marks, F. (2016). Utilization of healthcare in the Typhoid Fever Surveillance in Africa Program. Clinical Infectious Diseases, 62(Suppl. 1), S56-S68. doi: 10.1093/cid/civ891

Global Burden of Disease Pediatrics Collaboration, including Crump, J. A. (2016). Global and national burden of diseases and injuries among children and adolescents between 1990 and 2013: Findings from the Global Burden of Disease 2013 Study. JAMA Pediatrics, 170(3), 267-287. doi: 10.1001/jamapediatrics.2015.4276

Hart, P. J., O'Shaughnessy, C. M., Siggins, M. K., Bobat, S., Kingsley, R. A., Goulding, D. A., Crump, J. A., … MacLennan, C. A. (2016). Differential killing of Salmonella enterica serovar Typhi by antibodies targeting Vi and Lipopolysaccharide O:9 antigen. PLoS ONE, 11(1), e0145945. doi: 10.1371/journal.pone.0145945

Liu, J., Ochieng, C., Wiersma, S., Ströher, U., Towner, J. S., Whitmer, S., … Crump, J. A., … Fields, B. (2016). Development of a TaqMan Array Card for acute febrile illness outbreak investigation and surveillance of emerging pathogens, including Ebola virus. Journal of Clinical Microbiology, 54(1), 49-58. doi: 10.1128/jcm.02257-15

Journal - Research Other

Tun, T., Nyunt, W. W., Latt, K. Z., Samaranayaka, A., Crump, J. A., Thinn, K. K., Cook, G. M., & Aung, H. L. (2016). Drug-resistant tuberculosis among previously treated patients in Yangon, Myanmar. International Journal of Mycobacteriology, 5(3), 366-367. doi: 10.1016/j.ijmyco.2016.06.004

von Kalckreuth, V., Konings, F., Aaby, P., Adu-Sarkodie, Y., Ali, M., Aseffa, A., … Crump, J. A., … Marks, F. (2016). The Typhoid Fever Surveillance in Africa Program (TSAP): Clinical, diagnostic, and epidemiological methodologies. Clinical Infectious Diseases, 62(Suppl. 1), S9-S16. doi: 10.1093/cid/civ693

Journal - Professional & Other Non-Research Articles

Dittrich, S., Tadesse, B. T., Moussy, F., Chua, A., Zorzet, A., Tängdén, T., … Crump, J. A., … González, I. J. (2016). Target product profile for a diagnostic assay to differentiate between bacterial and non-bacterial infections and reduce antimicrobial overuse in resource-limited settings: An expert consensus. PLoS ONE, 11(8), e0161721. doi: 10.1371/journal.pone.0161721

Conference Contribution - Published proceedings: Abstract

Crump, J. A. (2016). Invasive Salmonella infections in Africa [Invited]. Proceedings of the One Health Aotearoa Infectious Disease Research Symposium. Retrieved from https://idrec.ac.nz

Prinsen, G., Benschop, J., French, N. P., Sharp, J., Swai, E., Zadoks, R. N., Thomas, K. M., … Crump, J. A., & Waldman, L. (2016). Food safety in Tanzania's meat pathways: Knowledge and handling practices of butchers and eateries. Proceedings of the 34th Tanzania Veterinary Association (TVA) Annual Scientific Conference: Disease Control as the Main Driver for Improving Productivity and Livestock Market Access. Retrieved from http://www.tva.or.tz/index.php/annual-scientific-conference

Zadoks, R. N., Thomas, K. M., Barker, G. C., Benschop, J., Buza, J., Cleaveland, S., … Crump, J. A. (2016). Of meat and men, models and microbes: Understanding Salmonella risks in Tanzania's meat supply chain. Proceedings of the 34th Tanzania Veterinary Association (TVA) Annual Scientific Conference: Disease Control as the Main Driver for Improving Productivity and Livestock Market Access. Retrieved from http://www.tva.or.tz/index.php/annual-scientific-conference

Bodenham, R., Lukambagire, A.-H., Viana, M., Buza, J., Kazwala, R. R., Maro, V. P., … Crump, J. A., … Halliday, J. (2016). Brucellosis: Tackling knowledge gaps and evaluating options for control in Tanzania. Proceedings of the 34th Tanzania Veterinary Association (TVA) Annual Scientific Conference: Disease Control as the Main Driver for Improving Productivity and Livestock Market Access. Retrieved from http://www.tva.or.tz/index.php/annual-scientific-conference

Maze, M. J., Cash-Goldwasser, S., Biggs, H. M., Rubach, M. P., Galloway, R. L., Shadomy, S. V., Sharples, K. J., … Crump, J. A. (2016). Risk factors for acute leptospirosis in Northern Tanzania: A prospective cohort study. Proceedings of the Otago Global Health Institute (OGHI) 9th Annual Conference. (pp. 20). Retrieved from http://dnmeds.otago.ac.nz/departments/psm/research/international_hlth/conference/

Myat, T. O., Hannaway, R., Zin, K. N., Htike, W. W., Win, K. K., Murdoch, D. R., Crump, J. A., & Ussher, J. E. (2016). High prevalence of ESBL- and carbapenemase-producing Enterobacteriaceae among patients with sepsis in Yangon, Myanmar. Proceedings of the Otago Global Health Institute (OGHI) 9th Annual Conference. (pp. 19). Retrieved from http://dnmeds.otago.ac.nz/departments/psm/research/international_hlth/conference/

Thomas, K., Crump, J. A., Barker, G. C., Benschop, J., Buza, J., Cleaveland, S., … Zadoks, R. (2016). Hazards Associated with Zoonotic enteric pathogens in Emerging Livestock meat pathways (HAZEL): Understanding meat safety in Tanzania through a One Health approach. Proceedings of the 26th International Committee on Food Microbiology and Hygiene Conference (ICFMH): FoodMicro. Retrieved from http://www.foodmicro2018.com/speaker-presentation-slides/

2015

Journal - Research Article

GBD 2013 DALYs, and HALE Collaborators, including Bhala, N., Crump, J. A., Derrett, S., & Poulton, R. G. (2015). Global, regional, and national disability-adjusted life years (DALYs) for 306 diseases and injuries and healthly life expectancy (HALE) for 188 countries, 1990-2013: Quantifying the epidemiological transition. Lancet, 386(10009), 2145-2191. doi: 10.1016/S0140-6736(15)61340-X

Kirk, M. D., Pires, S. M., Black, R. E., Caipo, M., Crump, J. A., Deveesschauwer, B., … Angulo, F. J. (2015). World Health Organization estimates of the global and regional disease burden of 22 foodborne bacterial, protozoal, and viral diseases, 2010: A data synthesis. PLoS Medicine, 12(12), e1001921. doi: 10.1371/journal.pmed.1001921

Beardsley, J., Denning, D. W., Chau, N. V., Yen, N. T. B., Crump, J. A., & Day, J. N. (2015). Estimating the burden of fungal disease in Vietnam. Mycoses, 58(Suppl. 5), 101-106. doi: 10.1111/myc.12382

Nichols, C., Cruz Espinoza, L. M., von Kalckreuth, V., Aaby, P., El Tayeb, M. A., Ali, M., … Crump, J. A., … Marks, F. (2015). Bloodstream infections and frequency of pretreatment associated with age and hospitalization status in sub-Saharan Africa. Clinical Infectious Diseases, 61(Suppl. 4), S372-S379. doi: 10.1093/cid/civ730

Allan, K. J., Biggs, H. M., Halliday, J. E. B., Kazwala, R. R., Maro, V. P., Cleaveland, S., & Crump, J. A. (2015). Epidemiology of leptospirosis in Africa: A systematic review of a neglected zoonosis and a paradigm for 'One Health' in Africa. PLoS Neglected Tropical Diseases, 9(9), e0003899. doi: 10.1371/journal.pntd.0003899

Global Burden of Disease Study 2013 Collaborators, including Bhala, N., Crump, J. A., Poulton, R. G., & Derrett, S. (2015). Global, regional, and national incidence, prevalence, and years lived with disability for 301 acute and chronic diseases and injuries in 188 countries, 1990-2013: A systematic analysis for the Global Burden of Disease Study 2013. Lancet, 386(9995), 743-800. doi: 10.1016/S0140-6736(15)60692-4

Buchanan, A. M., Fiorillo, S. P., Omondi, M. W., Cunningham, C. K., & Crump, J. A. (2015). Establishment of biochemistry reference values for healthy Tanzanian infants, children, and adolescents in Kilimanjaro Region. Tropical Medicine & International Health, 20(11), 1569-1577. doi: 10.1111/tmi.12580

Penno, E. C., Crump, J. A., & Baird, S. J. (2015). Performance requirements to achieve cost-effectiveness of point-of-care tests for sepsis among patients with febrile illness in low-resource settings. American Journal of Tropical Medicine & Hygiene, 93(4), 841-849. doi: 10.4269/ajtmh.15-0082

Penno, E. C., Baird, S. J., & Crump, J. A. (2015). Cost-effectiveness of surveillance for bloodstream infections for sepsis management in low-resource settings. American Journal of Tropical Medicine & Hygiene, 93(4), 850-860. doi: 10.4269/ajtmh.15-0083

Crump, J. A., Sjölund-Karlsson, M., Gordon, M. A., & Parry, C. M. (2015). Epidemiology, clinical presentation, laboratory diagnosis, antimicrobial resistance, and antimicrobial management of invasive Salmonella infections. Clinical Microbiology Reviews, 28(4), 901-937. doi: 10.1128/cmr.00002-15

Prasad, N., Murdoch, D. R., Reyburn, H., & Crump, J. A. (2015). Etiology of severe febrile illness in low- and middle-income countries: A systematic review. PLoS ONE, 10(6), e0127962. doi: 10.1371/journal.pone.0127962

Mavura, D. R., Masenga, E. J., Minja, E., Grossmann, H., Crump, J. A., & Bartlett, J. A. (2015). Initiation of antiretroviral therapy in HIV-infected adults with skin complaints in northern Tanzania. International Journal of Dermatology, 54(1), 68-73. doi: 10.1111/ijd.12563

Sjölund-Karlsson, M., Howie, R., Rickert, R., Newton, A., Gonzalez-Aviles, G., & Crump, J. A. (2015). Plasmid-mediated quinolone resistance in isolates of Salmonella enterica serotype Typhi, USA. International Journal of Antimicrobial Agents, 45(1), 88-90. doi: 10.1016/j.ijantimicag.2014.09.015

GBD 2013 Mortality and Causes of Death Collaborators, including Crump, J. A., & Poulton, R. G. (2015). Global, regional, and national age-sex specific all-cause and cause-specific mortality for 240 causes of death, 1990-2013: A systematic analysis for the Global Burden of Disease Study 2013. Lancet, 385(9963), 117-171. doi: 10.1016/S0140-6736(14)61682-2

Crump, J. A., Wu, X., Kendall, M. A., Ive, P. D., Kumwenda, J. J., Grinsztejn, B., … Swindells, S. (2015). Predictors and outcomes of Mycobacterium tuberculosis bacterium among patients with HIV and tuberculosis co-infection enrolled in the ACTG A5221 STRIDE study. BMC Infectious Diseases, 15, 12. doi: 10.1186/s12879-014-0735-5

Kumarasamy, N., Aga, E., Ribaudo, H. J., Wallis, C. L., Katzenstein, D. A., Stevens, W. S., … Crump, J. A., … Bartlett, J. A. (2015). Lopinavir/ritonavir monotherapy as second-line antiretroviral treatment in resource-limited settings: Week 104 analysis of AIDS Clinical Trial Group (ACTG) A5230. Clinical Infectious Diseases, 60(10), 1552-1558. doi: 10.1093/cid/civ109

Ao, T. T., Feasey, N. A., Gordon, M. A., Keddy, K. H., Angulo, F. J., & Crump, J. A. (2015). Global burden of invasive nontyphoidal Salmonella Disease, 2010. Emerging Infectious Diseases, 21(6), 941-949. doi: 10.3201/eid2106.140999

Wong, V. K., Baker, S., Pickard, D. J., Parkhill, J., Page, A. J., Feasey, N. A., … Crump, J. A., … Dougan, G. (2015). Phylogeographical analysis of the dominant multidrug-resistant H58 clade of Salmonella Typhi identifies inter- and intracontinental transmission events. Nature Genetics, 47(6), 632-639. doi: 10.1038/ng.3281

Prasad, N., Sharples, K. J., Murdoch, D. R., & Crump, J. A. (2015). Community prevalence of fever and relationship with malaria among infants and children in low-resource areas. American Journal of Tropical Medicine & Hygiene, 93(1), 178-180. doi: 10.4269/ajtmh.14-0646

Halliday, J. E. B., Allan, K. J., Ekwem, D., Cleaveland, S., Kazwala, R. R., & Crump, J. A. (2015). Endemic zoonoses in the tropics: A public health problem hiding in plain sight. Veterinary Record, 176(9), 220-225. doi: 10.1136/vr.h798

Rubach, M. P., Maro, V. P., Bartlett, J. A., & Crump, J. A. (2015). Etiologies of illness among patients meeting Integrated Management of Adolescent and Adult Illness District Clinician Manual criteria for severe infections in Northern Tanzania: Implications for empiric antimicrobial therapy. American Journal of Tropical Medicine & Hygiene, 92(2), 454-462. doi: 10.4269/ajtmh.14-0496

Journal - Research Other

Crump, J. A., & Kirk, M. D. (2015). Estimating the burden of febrile illnesses. PLoS Neglected Tropical Diseases, 9(12), e0004040. doi: 10.1371/journal.pntd.0004040

Crump, J. A., & Heyderman, R. S. (2015). A perspective on invasive Salmonella disease in Africa. Clinical Infectious Diseases, 61(Suppl. 4), S235-S240. doi: 10.1093/cid/civ709

Crump, J. A. (2015). Building the case for wider use of typhoid vaccines. Vaccine, 33(3), C1-C2. doi: 10.1016/j.vaccine.2015.04.033

Conference Contribution - Published proceedings: Abstract

Morrison, A. L., Jack, S. J., Crump, J. A., & Sharples, K. J. (2015). An evaluation of a World Vision Water, Hygiene and Sanitation (WASH) Project on Tanna Island, Vanuatu. Proceedings of the 8th Annual Otago International Health Research Network (OIHRN) Conference. (pp. 10). Retrieved from http://dnmeds.otago.ac.nz/departments/psm/research/international_hlth

Beardsley, J., Denning, D. W., Chau, N. V., Yen, N. T. B., Crump, J. A., & Day, J. N. (2015). Estimating the burden of fungal disease in Vietnam: An actuarial approach to describe the 2012 incidence and prevalence of disease based on available risk-factor data. Proceedings of the 8th Annual Otago International Health Research Network (OIHRN) Conference. (pp. 6-7). Retrieved from http://dnmeds.otago.ac.nz/departments/psm/research/international_hlth

Aung, H. L., Tun, T., Moradigaravand, D., Köser, C. U., Nyunt, W. W., Aung, S. T., … Crump, J. A., … Cook, G. M., & Hill, P. C. (2015). Whole-genome sequencing of multidrug-resistant Mycobacterium tuberculosis from Myanmar. Proceedings of the 8th Annual Otago International Health Research Network (OIHRN) Conference. (pp. 1). Retrieved from http://dnmeds.otago.ac.nz/departments/psm/research/international_hlth

Conference Contribution - Verbal presentation and other Conference outputs

Aung, H. L., Tun, T., Moradigaravand, D., Köser, C. U., Nyunt, W. W., Aung, S. T., … Crump, J. A., … Cook, G. M., & Hill, P. C. (2015, August-September). Whole-genome sequencing of multidrug-resistant Mycobacterium tuberculosis from Myanmar. Verbal presentation at the Queenstown Molecular Biology (QMB) Meetings, Queenstown, New Zealand.

Crump, J. (2015, November). Global health perspective 2015: Global health security. Keynote presentation at the 8th Annual Otago International Health Research Network (OIHRN) Conference, Dunedin, New Zealand.

2014

Journal - Research Article

Crump, J. A., & Heyderman, R. S. (2014). Invasive Salmonella infections in Africa. Transactions of the Royal Society of Tropical Medicine & Hygiene, 108(11), 673-675. doi: 10.1093/trstmh/tru152

Myat, T. O., Prasad, N., Thinn, K. K., Win, K. K., Htike, W. W., Zin, K. N., Murdoch, D. R., & Crump, J. A. (2014). Bloodstream infections at a tertiary referral hospital in Yangon, Myanmar. Transactions of the Royal Society of Tropical Medicine & Hygiene, 108(11), 692-698. doi: 10.1093/trstmh/tru151

Reddy, E. A., Njau, B. N., Morpeth, S. C., Lancaster, K. E., Tribble, A. C., Maro, V. P., … Crump, J. A., … Hamilton, C. D. (2014). A randomized controlled trial of standard versus intensified tuberculosis diagnostics on treatment decisions by physicians in Northern Tanzania. BMC Infectious Diseases, 14, 89. doi: 10.1186/1471-2334-14-89

Sjölund-Karlsson, M., Howie, R. L., Crump, J. A., & Whichard, J. M. (2014). Fluoroquinolone susceptibility testing of Salmonella enterica: Detection of acquired resistance and selection of zone diameter breakpoints for levofloxacin and ofloxacin. Journal of Clinical Microbiology, 52(3), 877-884. doi: 10.1128/jcm.02679-13

Thompson, C. N., Kama, M., Acharya, S., Bera, U., Clemens, J., Crump, J. A., … Mulholland, K. (2014). Typhoid fever in Fiji: A reversible plague? Tropical Medicine & International Health, 19(10), 1284-1292. doi: 10.1111/tmi.12367

Naccache, S. N., Federman, S., Veeraraghavan, N., Zaharia, M., Lee, D., Samayoa, E., … Crump, J. A., … Chiu, C. Y. (2014). A cloud-compatible bioinformatics pipeline for ultrarapid pathogen identification from next-generation sequencing of clinical samples. Genome Research, 24, 1180-1192. doi: 10.1101/gr.171934.113

Vanderburg, S., Rubach, M. P., Halliday, J. E. B., Cleaveland, S., Reddy, E. A., & Crump, J. A. (2014). Epidemiology of Coxiella burnetii Infection in Africa: A OneHealth systematic review. PLoS Neglected Tropical Diseases, 8(4), e2787. doi: 10.1371/journal.pntd.0002787

Moon, A. M., Biggs, H. M., Rubach, M. P., Crump, J. A., Maro, V. P., Saganda, W., & Reddy, E. A. (2014). Evaluation of in-hospital management for febrile illness in Northern Tanzania before and after 2010 World Health Organization Guidelines for the Treatment of Malaria. PLoS ONE, 9(2), e89814. doi: 10.1371/journal.pone.0089814

Biggs, H. M., Lester, R., Nadjm, B., Mtove, G., Todd, J. E., Kinabo, G. D., … Crump, J. A. (2014). Invasive Salmonella infections in areas of high and low malaria transmission intensity in Tanzania. Clinical Infectious Diseases, 58(5), 638-647. doi: 10.1093/cid/cit798

Journal - Research Other

Crump, J. A. (2014). Updating and refining estimates of typhoid fever burden for public health action [Comment]. Lancet Global Health, 2(10), e551-e553. doi: 10.1016/S2214-109X(14)70306-7

Crump, J. A. (2014). Time for a comprehensive approach to the syndrome of fever in the tropics. Transactions of the Royal Society of Tropical Medicine & Hygiene, 108(2), 61-62. doi: 10.1093/trstmh/trt120

Conference Contribution - Published proceedings: Abstract

Baird, S., Penno, E., & Crump, J. (2014). Cost effectiveness of surveillance for bloodstream infections for sepsis management in low resource settings. American Journal of Tropical Medicine & Hygiene, 91(5, Suppl. 1), (pp. 141). doi: 10.4269/ajtmh.2014.91.74

Penno, E., Baird, S., & Crump, J. (2014). Cost effectiveness of a point of care test for sepsis among patients with febrile illness in low resource settings. American Journal of Tropical Medicine & Hygiene, 91(5, Suppl. 1), (pp. 140). doi: 10.4269/ajtmh.2014.91.74

Benschop, J., French, N., Prinsen, G., & Crump, J. (2014). Food safety and economic opportunity in Tanzania's meat value chain. Proceedings of the African Studies Association of Australasia and the Pacific (AFSAAP) Annual Conference. (pp. 21-22). AFSAAP. [Abstract]

Sowerby, S., Johnstone, M., Crump, J., & Hill, P. (2014). Cell-phone-enabled monitoring of soil transmitted helminthiasis. Proceedings of the 7th Annual Otago International Health Research Network (OIHRN) Conference. (pp. 12). Retrieved from http://dnmeds.otago.ac.nz/departments/psm/research/international_hlth/conference/index.html

Penno, E. C., Baird, S. J., & Crump, J. A. (2014). Cost effectiveness of a point of care test for sepsis among patients with febrile illness in low resource settings. Proceedings of the 7th Annual Otago International Health Research Network (OIHRN) Conference. (pp. 10). Retrieved from http://dnmeds.otago.ac.nz/departments/psm/research/international_hlth/conference/index.html

Conference Contribution - Verbal presentation and other Conference outputs

Crump, J. (2014, September). Fever aetiology: Bacterial zoonoses and global health. Verbal presentation at the Infectious Disease Research Mini-Symposium, Wellington, New Zealand.

Other Research Output

Crump, J. (2014, May). Beyond malaria: Fever in the tropics. University of Otago, Dunedin, New Zealand. [Inaugural Professorial Lecture].

2013

Journal - Research Article

Gray, K. D., Cunningham, C. K., Clifton, D. C., Afwamba, I. A., Mushi, G. S., Msuya, L. J., Crump, J. A., & Buchanan, A. M. (2013). Prevalence of mycobacteremia among HIV-infected infants and children in northern Tanzania. Pediatric Infectious Disease Journal, 32(7), 754-756. doi: 10.1097/INF.0b013e318286957f

Biggs, H. M., Galloway, R. L., Bui, D. M., Morrissey, A. B., Maro, V. P., & Crump, J. A. (2013). Leptospirosis and human immunodeficiency virus co-infection among febrile inpatients in northern Tanzania. Vector-Borne & Zoonotic Diseases, 13(8), 572-580. doi: 10.1089/vbz.2012.1205

Biggs, H. M., Hertz, J. T., Munishi, O. M., Galloway, R. L., Marks, F., Saganda, W., … Crump, J. A. (2013). Estimating leptospirosis incidence using hospital-based surveillance and a population-based health care utilization survey in Tanzania. PLoS Neglected Tropical Diseases, 7(12), e2589. doi: 10.1371/journal.pntd.0002589

Hertz, J. T., Munishi, O. M., Sharp, J. P., Reddy, E. A., & Crump, J. A. (2013). Comparing actual and perceived causes of fever among community members in a low malaria transmission setting in northern Tanzania. Tropical Medicine & International Health, 18(11), 1406-1415. doi: 10.1111/tmi.12191

Rubach, M. P., Halliday, J. E. B., Cleaveland, S., & Crump, J. A. (2013). Brucellosis in low-income and middle-income countries. Current Opinion in Infectious Disease, 26, 404-412. doi: 10.1097/QCO.0b013e3283638104

Crump, J. A., Morrissey, A. B., Nicholson, W. L., Massung, R. F., Stoddard, R. A., Galloway, R. L., … Bartlett, J. A. (2013). Etiology of severe non-malaria febrile illness in Northern Tanzania: A prospective cohort study. PLoS Neglected Tropical Diseases, 7(7), e2324. doi: 10.1371/journal.pntd.0002324

Fiorillo, S. P., Diefenthal, H. C., Goodman, P. C., Ramadhani, H. O., Njau, B. N., Morrissey, A. B., … Crump, J. A. (2013). Chest radiography for predicting the cause of febrile illness among inpatients in Moshi, Tanzania. Clinical Radiology, 68(10), 1039-1046. doi: 10.1016/j.crad.2013.05.002

Journal - Research Other

Parry, C. M., Basnyat, B., & Crump, J. A. (2013). The management of antimicrobial-resistant enteric fever. Expert Review of Anti-Infective Therapy, 11(12), 1259-1261. doi: 10.1586/14787210.2013.858019

Crump, J. A., DeCamp, M., Barry, M., & Sugarman, J. (2013). Reflecting on short-term international service-learning trips. Academic Medicine, 88(1), 10-11. doi: 10.1097/ACM.0b013e3182753f25

Conference Contribution - Published proceedings: Abstract

Biggs, H. M., Lester, R., Kinabo, G. D., Morrissey, A. B., Mtove, G., Nadjm, B., … Crump, J. A. (2013). Invasive Salmonella infections in areas of high and low malaria transmission intensity in Tanzania. Proceedings of the 6th Annual Otago International Health Research Network (OIHRN) Conference. (pp. 15). Retrieved from http://dnmeds.otago.ac.nz/departments/psm/research/international_hlth/conference/index.html

Prasad, N., Murdoch, D. R., & Crump, J. A. (2013). A systematic review of the aetiology of sever febrile illness in low and middle-income countries. Proceedings of the 6th Annual Otago International Health Research Network (OIHRN) Conference. (pp. 14). Retrieved from http://dnmeds.otago.ac.nz/departments/psm/research/international_hlth/conference/index.html

Penno, E. C., Crump, J. A., & Baird, S. (2013). Cost effectiveness analyses of laboratory services in low resource settings. Proceedings of the 6th Annual Otago International Health Research Network (OIHRN) Conference. (pp. 6). Retrieved from http://dnmeds.otago.ac.nz/departments/psm/research/international_hlth/conference/index.html

Conference Contribution - Verbal presentation and other Conference outputs

Crump, J. A. (2013, August). The challenge of non-malaria fever in the tropics. Verbal presentation at the Queenstown Molecular Biology (QMB) Meetings, Queenstown, New Zealand.

2012

Journal - Research Article

Bouley, A. J., Biggs, H. M., Stoddard, R. A., Morrissey, A. B., Bartlett, J. A., Afwamba, I. A., … Crump, J. A. (2012). Brucellosis among hospitalized febrile patients in northern Tanzania. American Journal of Tropical Medicine & Hygiene, 87(6), 1105-1111. doi: 10.4269/ajtmh.2012.12-0327

Bonsignori, M., Montefiori, D. C., Wu, X., Chen, X., Hwang, K.-K., Tsao, C.-Y., … Crump, J. A., … Haynes, B. F. (2012). Two distinct broadly neutralizing antibody specificities of different clonal lineages in a single HIV-1-infected donor: Implications for vaccine design. Journal of Virology, 86(8), 4688-4692. doi: 10.1128/jvi.07163-11

Bartlett, J. A., Ribaudo, H. J., Wallis, C. L., Aga, E., Katzenstein, D. A., Stevens, W. S., … Crump, J. A., … Kumarasamy, N. (2012). Lopinavir/ritonavir monotherapy after virologic failure of first-line antiretroviral therapy in resource-limited settings. AIDS, 26(11), 1345-1353. doi: 10.1097/QAD.0b013e328353b066

Buchanan, A. M., Nadjm, B., Amos, B., Mtove, G., Sifuna, D., Cunningham, C. K., Crump, J. A., & Reyburn, H. (2012). Utility of rapid antibody tests to exclude HIV-1 infection among infants and children aged <18 months in a low-resource setting. Journal of Clinical Virology, 55(3), 244-249. doi: 10.1016/j.jcv.2012.08.001

Clifton, D. C., Ramadhani, H. O., Msuya, L. J., Njau, B. N., Kinabo, G. D., Buchanan, A. M., & Crump, J. A. (2012). Predicting mortality for paediatric inpatients where malaria is uncommon. Archives of Disease in Childhood, 97(10), 889-894. doi: 10.1136/archdischild-2012-301812

Crump, J. A., Ramadhani, H. O., Morrissey, A. B., Saganda, W., Mwako, M. S., Yang, L.-Y., … Bartlett, J. A. (2012). Bacteremic disseminated tuberculosis in sub-Saharan Africa: A prospective cohort study. Clinical Infectious Diseases, 55(2), 242-250. doi: 10.1093/cid/cis409

Jennings, C., Harty, B., Granger, S., Wager, C., Crump, J. A., Fiscus, S. A., & Bremer, J. W. (2012). Cross-platform analysis of HIV-1 RNA data generated by a multicenter assay validation study with wide geographic representation. Journal of Clinical Microbiology, 50(8), 2737-2747. doi: 10.1128/jcm.00578-12

Freel, S. A., Picking, R. A., Ferrari, G., Ding, H., Ochsenbauer, C., Kappes, J. C., … Crump, J. A., … Tomaras, G. D. (2012). Initial HIV-1 antigen-specific CD8⁺ T cells in acute HIV-1 infection inhibit transmitted/founder virus replication. Journal of Virology, 86(12), 6835-6846. doi: 10.1128/jvi.00437-12

Fiorillo, S. P., Landman, K. Z., Tribble, A. C., Mtalo, A., Itemba, D. K., Ostermann, J., … Crump, J. A. (2012). Changes in HIV risk behavior and seroincidence among clients presenting for repeat HIV counseling and testing in Moshi, Tanzania. AIDS Care, 24(10), 1264-1271. doi: 10.1080/09540121.2012.658751

Hertz, J. T., Munishi, O. M., Ooi, E. E., Howe, S., Lim, W. Y., Chow, A., … Crump, J. A. (2012). Chikungunya and Dengue fever among hospitalized febrile patients in Northern Tanzania. American Journal of Tropical Medicine & Hygiene, 86(1), 171-177. doi: 10.4269/ajtmh.2012.11-0393

Crump, J. A., Tuohy, M. J., Morrissey, A. B., Ramadhani, H. O., Njau, B. N., Maro, V. P., … Procop, G. W. (2012). Performance of nucleic acid amplification following extraction of 5 milliliters of whole blood for diagnosis of Mycobacterium tuberculosis bacteremia. Journal of Clinical Microbiology, 50(1), 138-141. doi: 10.1128/jcm.05963-11

Journal - Research Other

Lofgren, S. M., Kirsch, E. J., Maro, V. P., Morrissey, A. B., Msuya, L. J., Kinabo, G. D., … Crump, J. A. (2012). Histoplasmosis among hospitalized febrile patients in northern Tanzania. Transactions of the Royal Society of Tropical Medicine & Hygiene, 106(8), 504-507. doi: 10.1016/j.trstmh.2012.05.009

Crump, J. A., & Sugarman, J. (2012). Examining the scale and outcomes of global health fellowship programs in the United States. Journal of Graduate Medical Education, 4(2), 261-262. doi: 10.4300/JGME-D-12-00055.1

Crump, J. A. (2012). Typhoid fever and the challenge of nonmalaria febrile illness in Sub-Saharan Africa. Clinical Infectious Diseases, 54(8), 1107-1109. doi: 10.1093/cid/cis024

DeCamp, M., Crump, J. A., Rodriguez, J., Richardson, G., Barry, M., & Sugarman, J. (2012). Tb in a Global Health Exchange Program. Journal of General Internal Medicine, 27(1), 7. doi: 10.1007/s11606-011-1908-1

Journal - Professional & Other Non-Research Articles

Crump, J. A. (2012). Reply to Yansouni et al. Clinical Infectious Diseases, 55(4), 611-612. doi: 10.1093/cid/cis468

Conference Contribution - Published proceedings: Abstract

Crump, J. A., Morrissey, A. B., Nicholson, W. L., Massung, R. F., Stoddard, R. A., Galloway, R. L., … Bartlett, J. A. (2012). Etiology of non-malaria fever among hospitalized patients in northern Tanzania. Proceedings of the 5th Annual Otago International Health Research Network (OIHRN) Conference. Retrieved from http://dnmeds.otago.ac.nz/departments/psm/research/international_hlth/conference/programme.html

Saha, D., Adeyemi, M., Sharples, K., Crump, J., Antonio, M., MacKenzie, G., & Hill, P. (2012). Water, sanitation, and hygiene and diarrhoeal disease among infants and young children in The Gambia. Proceedings of the 5th Annual Otago International Health Research Network (OIHRN) Conference. Retrieved from http://dnmeds.otago.ac.nz/departments/psm/research/international_hlth/conference/programme.html

Conference Contribution - Verbal presentation and other Conference outputs

Crump, J. (2012, November). Non-malaria febrile illness. Verbal presentation at the American Society of Tropical Medicine and Hygiene (ASTMH) 61st Annual Meeting, Atlanta, Georgia, USA.

Luby, S., Hill, P., Murdoch, D., & Crump, J. (2012, November). International funding. Panel discussion at the 5th Annual Otago International Health Research Network (OIHRN) Conference, Dunedin, New Zealand.

2011

Journal - Research Article

Crump, J. A., Ramadhani, H. O., Morrissey, A. B., Saganda, W., Mwako, M. S., Yang, L.-Y., … Maro, V. P. (2011). Invasive bacterial and fungal infections among hospitalized HIV-infected and HIV-uninfected adults and adolescents in northern Tanzania. Clinical Infectious Diseases, 52(3), 341-348. doi: 10.1093/cid/ciq103

Biggs, H. M., Bui, D. M., Galloway, R. L., Stoddard, R. A., Shadomy, S. V., Morrissey, A. B., … Crump, J. A. (2011). Leptospirosis among hospitalized febrile patients in northern Tanzania. American Journal of Tropical Medicine & Hygiene, 85(2), 275-281. doi: 10.4269/ajtmh.2011.11-0176

Bonsignori, M., Hwang, K.-K., Chen, X., Tsao, C.-Y., Morris, L., Gray, E., … Crump, J. A., … Haynes, B. F. (2011). Analysis of a clonal lineage of HIV-1 envelope V2/V3 conformational epitope-specific broadly neutralizing antibodies and their inferred unmutated common ancestors. Journal of Virology, 85(19), 9998-10009. doi: 10.1128/jvi.05045-11

Crump, J. A., Medalla, F. M., Joyce, K. W., Krueger, A. L., Hoekstra, R. M., Whichard, J. M., … and the Emerging Infections Program NARMS Working Groups. (2011). Antimicrobial resistance among invasive nontyphoidal Salmonella enterica isolates in the United States: National Antimicrobial Resistance Monitoring System, 1996 to 2007. Antimicrobial Agents & Chemotherapy, 55(3), 1148-1154. doi: 10.1128/aac.01333-10

Crump, J. A., Morrissey, A. B., Ramadhani, H. O., Njau, B., Maro, V. P., & Reller, L. B. (2011). Controlled comparison of BacT/Alert MB system, manual Myco/F Lytic procedure, and Isolator 10 system for diagnosis of Mycobacterium tuberculosis bacteremia. Journal of Clinical Microbiology, 49(8), 3054-3057. doi: 10.1128/jcm.01035-11

Crump, J. A., Ramadhani, H. O., Morrissey, A. B., Msuya, L. J., Yang, L.-Y., Chow, S.-C., … Kinabo, G. D. (2011). Invasive bacterial and fungal infections among hospitalized HIV-infected and HIV-uninfected children and infants in northern Tanzania. Tropical Medicine & International Health, 16(7), 830-837. doi: 10.1111/j.1365-3156.2011.02774.x

Keddy, K. H., Sooka, A., Letsoalo, M. E., Hoyland, G., Chaignat, C. L., Morrissey, A. B., & Crump, J. A. (2011). Sensitivity and specificity of typhoid fever rapid antibody tests for laboratory diagnosis at two sub-Saharan African sites. Bulletin of the World Health Organization, 89(9), 640-647. doi: 10.2471/blt.11.087627

McLellan, J. S., Pancera, M., Carrico, C., Gorman, J., Julien, J.-P., Khayat, R., … Crump, J. A., … Kwong, P. D. (2011). Structure of HIV-1 gp120 V1/V2 domain with broadly neutralizing antibody PG9. Nature, 480(7377), 336-343. doi: 10.1038/nature10696

Ostermann, J., Reddy, E. A., Shorter, M. M., Muiruri, C., Mtalo, A., Itemba, D. K., … Crump, J. A., & Thielman, N. M. (2011). Who tests, who doesn't, and why? Uptake of mobile HIV counseling and testing in the Kilimanjaro Region of Tanzania. PLoS ONE, 6(1), e16488. doi: 10.1371/journal.pone.0016488

Prabhu, M., Nicholson, W. L., Roche, A. J., Kersh, G. J., Fitzpatrick, K. A., Oliver, L. D., … Crump, J. A. (2011). Q fever, spotted fever group, and typhus group rickettsioses among hospitalized febrile patients in Northern Tanzania. Clinical Infectious Diseases, 53(4), e8-e15. doi: 10.1093/cid/cir411

Scott, L. E., Crump, J. A., Msuya, E., Morrissey, A. B., Venter, W. F., & Stevens, W. S. (2011). Abbott RealTime HIV-1 m2000rt viral load testing: Manual extraction versus the automated m2000sp extraction. Journal of Virological Methods, 172(1-2), 78-80. doi: 10.1016/j.jviromet.2010.12.006

Sjölund-Karlsson, M., Joyce, K., Blickenstaff, K., Ball, T., Haro, J., Medalla, F. M., … Crump, J. A., & Whichard, J. M. (2011). Antimicrobial susceptibility to azithromycin among Salmonella enterica isolates from the United States. Antimicrobial Agents & Chemotherapy, 55(9), 3985-3989. doi: 10.1128/aac.00590-11

Tomaras, G. D., Binley, J. M., Gray, E. S., Crooks, E. T., Osawa, K., Moore, P. L., … Crump, J. A., … Morris, L. (2011). Polyclonal B cell responses to conserved neutralization epitopes in a subset of HIV-1-infected individuals. Journal of Virology, 85(21), 11502-11519. doi: 10.1128/jvi.05363-11

van Ingen, J., Tortoli, E., Selvarangan, R., Coyle, M. B., Crump, J. A., Morrissey, A. B., … van Soolingen, D. (2011). Mycobacterium sherrisii sp. nov., a slow-growing non-chromogenic species. International Journal of Systematic & Evolutionary Microbiology, 61(6), 1293-1298. doi: 10.1099/ijs.0.024752-0

Waters, R. C., Ostermann, J., Reeves, T. D., Masnick, M. F., Thielman, N. M., Bartlett, J. A., & Crump, J. A. (2011). A cost-effectiveness analysis of alternative HIV retesting strategies in sub-Saharan Africa. Journal of Acquired Immune Deficiency Syndromes, 56(5), 443-452. doi: 10.1097/QAI.0b013e3182118f8c

Wu, X., Zhou, T., Zhu, J., Zhang, B., Georgiev, I., Wang, C., … Crump, J. A., … Mascola, J. R. (2011). Focused evolution of HIV-1 neutralizing antibodies revealed by structures and deep sequencing. Science, 333(6049), 1593-1602. doi: 10.1126/science.1207532

Prabhu, M., Mchome, B., Ostermann, J., Itemba, D., Njau, B., Thielman, N., KIWAKKUKI-Duke VCT Study Group, including Crump, J. A. (2011). Prevalence and correlates of intimate partner violence among women attending HIV voluntary counseling and testing in northern Tanzania, 2005-2008. International Journal of Gynecology & Obstetrics, 113(1), 63-67. doi: 10.1016/j.ijgo.2010.10.019

Journal - Research Other

Crump, J. A., Gove, S., & Parry, C. M. (2011). Management of adolescents and adults with febrile illness in resource limited areas [Clinical review]. BMJ, 343(7819), d4847. doi: 10.1136/bmj.d4847

Crump, J. A., & Sugarman, J. (2011). Guidelines for international service learning programs [Letter]. Developing World Bioethics, 11(3), 170. doi: 10.1111/j.1471-8847.2011.00315.x

Crump, J. A., & Sugarman, J. (2011). Guidelines for global health training [Letter]. Health Affairs, 30(6), 1215. doi: 10.1377/hlthaff.2011.0428

Crump, J. A., & Sugarman, J. (2011). In response [Letter]. American Journal of Tropical Medicine & Hygiene, 84(3), 507. doi: 10.4269/ajtmh.2011.10-0694b

2010

Journal - Research Article

Buchanan, A. M., Muro, F. J., Gratz, J., Crump, J. A., Musyoka, A. M., Sichangi, M. W., … Cunningham, C. K. (2010). Establishment of haematological and immunological reference values for healthy Tanzanian children in Kilimanjaro Region. Tropical Medicine & International Health, 15(9), 1011-1021. doi: 10.1111/j.1365-3156.2010.02585.x

Crump, J. A., & Mintz, E. D. (2010). Global trends in typhoid and paratyphoid fever [Invited article]. Clinical Infectious Diseases, 50(2), 241-246. doi: 10.1086/649541

Crump, J. A., Sugarman, J., and the Working Group on Ethics Guidelines for Global Health Training (WEIGHT). (2010). Ethics and best practice guidelines for training experiences in global health. American Journal of Tropical Medicine & Hygiene, 83(6), 1178-1182. doi: 10.4269/ajtmh.2010.10-0527

DuBois, A. E., Crump, J. A., Keswick, B. H., Slutsker, L., Quick, R. E., Vulule, J. M., & Luby, S. P. (2010). Determinants of use of household-level water chlorination products in rural Kenya, 2003-2005. International Journal of Environmental Research & Public Health, 7(10), 3842-3852. doi: 10.3390/ijerph7103842

Nadjm, B., Amos, B., Mtove, G., Ostermann, J., Chonya, S., Wangai, H., … Crump, J. A., … Reyburn, H. (2010). WHO guidelines for antimicrobial treatment in children admitted to hospital in an area of intense Plasmodium falciparum transmission: Prospective study. BMJ, 340, c1350. doi: 10.1136/bmj.c1350

Reddy, E. A., Shaw, A. V., & Crump, J. A. (2010). Community-acquired bloodstream infections in Africa: A systematic review and meta-analysis. Lancet Infectious Diseases, 10(6), 417-432. doi: 10.1016/s1473-3099(10)70072-4

Emmett, S. D., Cunningham, C. K., Mmbaga, B. T., Kinabo, G. D., Schimana, W., Swai, M. E., … Crump, J. A., & Reddy, E. A. (2010). Predicting virologic failure among HIV-1-infected children receiving antiretroviral therapy in Tanzania: A cross-sectional study. Journal of Acquired Immune Deficiency Syndromes, 54(4), 368-375. doi: 10.1097/QAI.0b013e3181cf4882

Journal - Research Other

Lofgren, S. M., Stevens, W. S., Bartlett, J. A., & Crump, J. A. (2010). Reply to 'Quantification of HIV-1 RNA on Dried Blood Spots' AIDS 24:475-6 [Letter]. AIDS, 24(5), 785-786. doi: 10.1097/QAD.0b013e32833653c5

2009

Journal - Research Article

Crump, J. A., Scott, L. E., Msuya, E., Morrissey, A. B., Kimaro, E. E., Shao, J. F., & Stevens, W. S. (2009). Evaluation of the Abbott m2000rt RealTime™ HIV-1 assay with manual sample preparation compared with the ROCHE COBAS® AmpliPrep™/AMPLICOR™ HIV-1 MONITOR® v1.5 using specimens from East Africa. Journal of Virological Methods, 162(1-2), 218-222. doi: 10.1016/j.jviromet.2009.08.013

Crump, J. A., van Ingen, J., Morrissey, A. B., Boeree, M. J., Mavura, D. R., Swai, B., … van Soolingen, D. (2009). Invasive disease caused by nontuberculous mycobacteria, Tanzania. Emerging Infectious Diseases, 15(1), 53-55. doi: 10.3201/eid1501.081093

Johnson, O. O., Benjamin, D. K., Benjamin, Jr, D. K., Schimana, W., Tillekeratne, L. G., Crump, J. A., … Cunningham, C. K. (2009). Total lymphocyte count and World Health Organization pediatric clinical stage as markers to assess need to initiate antiretroviral therapy among human immunodeficiency virus-infected children in Moshi, Northern Tanzania. Pediatric Infectious Disease Journal, 28(6), 493-497. doi: 10.1097/INF.0b013e3181950b7f

Lofgren, S. M., Morrissey, A. B., Chevallier, C. C., Malabeja, A. I., Edmonds, S., Amos, B., … Crump, J. A. (2009). Evaluation of a dried blood spot HIV-1 RNA program for early infant diagnosis and viral load monitoring at rural and remote healthcare facilities. AIDS, 23(18), 2459-2466. doi: 10.1097/QAD.0b013e328331f702

Morpeth, S. C., Ramadhani, H. O., & Crump, J. A. (2009). Invasive non-Typhi Salmonella disease in Africa. Clinical Infectious Diseases, 49(4), 606-611. doi: 10.1086/603553

Shao, H. J., Crump, J. A., Ramadhani, H. O., Uiso, L. O., Ole-Nguyaine, S., Moon, A. M., … Thielman, N. M. (2009). Early versus delayed fixed dose combination abacavir/lamivudine/zidovudine in patients with HIV and tuberculosis in Tanzania. AIDS Research & Human Retroviruses, 25(12), 1277-1285. doi: 10.1089/aid.2009.0100

Shorter, M. M., Ostermann, J., Crump, J. A., Tribble, A. C., Itemba, D. K., Mgonja, A., … Thielman, N. M. (2009). Characteristics of HIV voluntary counseling and testing clients before and during care and treatment scale-up in Moshi, Tanzania. Journal of Acquired Immune Deficiency Syndromes, 52(5), 648-654. doi: 10.1097/QAI.0b013e3181b31a6a

Tillekeratne, L. G., Thielman, N. M., Kiwera, R. A., Chu, H. Y., Kaale, L., Morpeth, S. C., … Crump, J. A. (2009). Morbidity and mortality among a cohort of HIV-infected adults in a programme for community home-based care, in the Kilimanjaro Region of Tanzania (2003-2005). Annals of Tropical Medicine & Parasitology, 103(3), 263-273. doi: 10.1179/136485909x398203

Tribble, A. C., Hamilton, C. D., Crump, J. A., Mgonja, A., Mtalo, A., Ndanu, E., … Thielman, N. M. (2009). Missed opportunities for diagnosis of tuberculosis and human immunodeficiency virus co-infection in Moshi, Tanzania. International Journal of Tuberculosis & Lung Disease, 13(10), 1260-1266.

2008

Journal - Research Article

Ram, P. K., Crump, J. A., Gupta, S. K., Miller, M. A., & Mintz, E. D. (2008). Part II. Analysis of data gaps pertaining to Shigella infections in low and medium human development index countries, 1984-2005. Epidemiology & Infection, 136(5), 577-603. doi: 10.1017/s0950268807009351

Morpeth, S. C., Thielman, N. M., Ramadhani, H. O., Hamilton, J. D., Ostermann, J., Kisenge, P. R., … Crump, J. A. (2008). Effect of trimethoprim-sulfamethoxazole prophylaxis on antimicrobial resistance of fecal Escherichia coli in HIV-infected patients in Tanzania. Journal of Acquired Immune Deficiency Syndromes, 47(5), 585-591. doi: 10.1097/QAI.0b013e31816856db

Seshadri, C., Uiso, L. O., Ostermann, J., Diefenthal, H., Shao, H. J., Chu, H. Y., … Crump, J. A. (2008). Low sensitivity of T-cell based detection of tuberculosis among HIV co-infected Tanzanian in-patients. East African Medical Journal, 85(9), 442-449.

Crump, J. A., Kretsinger, K., Gay, K., Hoekstra, R. M., Vugia, D. J., Hurd, S., … and the Emerging Infections Program FoodNet and NARMS Working Groups. (2008). Clinical response and outcome of infection with Salmonella enterica serotype Typhi with decreased susceptibility to fluoroquinolones: A United States FoodNet multicenter retrospective cohort study. Antimicrobial Agents & Chemotherapy, 52(4), 1278-1284. doi: 10.1128/aac.01509-07

Crump, J. A., Ram, P. K., Gupta, S. K., Miller, M. A., & Mintz, E. D. (2008). Part I. Analysis of data gaps pertaining to Salmonella enterica serotype Typhi infections in low and medium human development index countries, 1984-2005. Epidemiology & Infection, 136(4), 436-448. doi: 10.1017/s0950268807009338

Gupta, S. K., Keck, J., Ram, P. K., Crump, J. A., Miller, M. A., & Mintz, E. D. (2008). Part III. Analysis of data gaps pertaining to enterotoxigenic Escherichia coli infections in low and medium human development index countries, 1984-2005. Epidemiology & Infection, 136(6), 721-738. doi: 10.1017/s095026880700934x

Landman, K. Z., Ostermann, J., Crump, J. A., Mgonja, A., Mayhood, M. K., Itemba, D. K., … Thielman, N. M. (2008). Gender differences in the risk of HIV infection among persons reporting abstinence, monogamy, and multiple sexual partners in Northern Tanzania. PLoS ONE, 3(8), e3075. doi: 10.1371/journal.pone.0003075

Mayhood, M. K., Afwamba, I. A., Odhiambo, C. O., Ndanu, E., Thielman, N. M., Morrissey, A. B., … Crump, J. A. (2008). Validation, performance under field conditions, and cost-effectiveness of Capillus HIV-1/HIV-2 and determine HIV-1/2 rapid human immunodeficiency virus antibody assays using sequential and parallel testing algorithms in Tanzania. Journal of Clinical Microbiology, 46(12), 3946-3951. doi: 10.1128/jcm.01045-08

Journal - Research Other

Crump, J. A., & Sugarman, J. (2008). Ethical considerations for short-term experiences by trainees in global health [Commentary]. JAMA, 300(12), 1456-1458. doi: 10.1001/jama.300.12.1456

2007

Journal - Research Article

Crump, J. A., Mendoza, C. E., Priest, J. W., Glass, R. I., Monroe, S. S., Dauphin, L. A., … Luby, S. P. (2007). Comparing serologic response against enteric pathogens with reported diarrhea to assess the impact of improved household drinking water quality. American Journal of Tropical Medicine & Hygiene, 77(1), 136-141.

Landman, K. Z., Thielman, N. M., Mgonja, A., Shao, H. J., Itemba, D. K., Ndosi, E. M., … Crump, J. A. (2007). Antiretroviral treatment literacy among HIV voluntary counseling and testing clients in Moshi, Tanzania, 2003 to 2005. Journal of the International Association of Physicians in AIDS Care (JIAPAC), 6(1), 24-26. doi: 10.1177/1545109706298479

Morpeth, S. C., Crump, J. A., Shao, H. J., Ramadhani, H. O., Kisenge, P. R., Moylan, C. A., … Thielman, N. M. (2007). Predicting CD4 lymphocyte count <200 cells/mm³ in an HIV type 1-infected African population. AIDS Research & Human Retroviruses, 23(10), 1230-1236. doi: 10.1089/aid.2007.0053

Ramadhani, H. O., Thielman, N. M., Landman, K. Z., Ndosi, E. M., Gao, F., Kirchherr, J. L., … Crump, J. A. (2007). Predictors of incomplete adherence, virologic failure, and antiviral drug resistance among HIV-infected adults receiving antiretroviral therapy in Tanzania. Clinical Infectious Diseases, 45(11), 1492-1498. doi: 10.1086/522991

Srikantiah, P., Vafokulov, S., Luby, S. P., Ishmail, T., Earhart, K., Khodjaev, N., … Crump, J. A., & Mahoney, F. J. (2007). Epidemiology and risk factors for endemic typhoid fever in Uzbekistan. Tropical Medicine & International Health, 12(7), 838-847. doi: 10.1111/j.1365-3156.2007.01853.x

2006

Journal - Research Article

Landman, K. Z., Kinabo, G. D., Schimana, W., Dolmans, W. M., Swai, M. E., Shao, J. F., … Crump, J. A. (2006). Capacity of health-care facilities to deliver HIV treatment and care services, Northern Tanzania, 2004. International Journal of STD & AIDS, 17(7), 459-462. doi: 10.1258/095646206777689134

Srikantiah, P., Girgis, F. Y., Luby, S. P., Jennings, G., Wasfy, M. O., Crump, J. A., … Mahoney, F. J. (2006). Population-based surveillance of typhoid fever in Egypt. American Journal of Tropical Medicine & Hygiene, 74(1), 114-119.

Thielman, N. M., Chu, H. Y., Ostermann, J., Itemba, D. K., Mgonja, A., Mtweve, S., … Crump, J. A. (2006). Cost-effectiveness of free HIV voluntary counseling and testing through a community-based AIDS service organization in Northern Tanzania. American Journal of Public Health, 96(1), 114-119. doi: 10.2105/ajph.2004.056796

Journal - Research Other

Kibiki, G. S., Thielman, N. M., Maro, V. P., Sam, N. E., Dolmans, W. M., & Crump, J. A. (2006). Hookworm infection of the duodenum associated with dyspepsia and diagnosed by oesophagoduodenoscopy: Case report. East African Medical Journal, 83(12), 689-692.

2005

Journal - Research Article

Chambers, S. T., Sanders, J., Patton, W. N., Ganly, P., Birch, M., Crump, J. A., & Spearing, R. L. (2005). Reduction of exit-site infections of tunnelled intravascular catheters among neutropenic patients by sustained-release chlorhexidine dressings: Results from a prospective randomized controlled trial. Journal of Hospital Infection, 61, 53-61.

2003

Conference Contribution - Poster Presentation (not in published proceedings)

Chambers, S., Sanders, J., Patton, W. N., Ganly, P. S., Birch, M., Crump, J., & Spearing, R. L. (2003). Reduction of intravascular catheter exit site infections among neutropenic patients by sustained release chlorhexidine dressings: Results from a prospective randomized controlled trial. Poster session presented at the Haematology Society of Australia and New Zealand Annual Scientific Meeting 2003, Christchurch, New Zealand.

2001

Journal - Research Article

Crump, J. A., Murdoch, D. R., & Baker, M. G. (2001). Emerging infectious diseases in an island ecosystem: the New Zealand perspective. Emerging Infectious Diseases, 7, 767-772.

2000

Journal - Research Article

Crump, J. A., Murdoch, D. R., Chambers, S. T., Aickin, D. R., & Hunter, L. A. (2000). Female genital schistosomiasis. Journal of Travel Medicine, 7(1), 30-32.

1999

Journal - Research Article

Crump, J. A., McLay, C. L., & Chambers, S. (1999). Ciguatera fish poisoning. New Zealand Medical Journal, 112(1092), 282-283.

Elliot, N., Crump, J., McGuire, A., Bagshaw, S., & Chambers, S. (1999). Knowledge, attitudes and behaviour towards HIV infection among family planning clinic attendees: changes between 1991 and 1997. New Zealand Medical Journal, 112(1085), 121-123.

Journal - Professional & Other Non-Research Articles

Crump, J. A., Chambers, S., Acland, R. H., McKinney, M. R., Murdoch, D. R., & MacFarlane, M. R. (1999). Successful management of pain syndrome due to Angiostrongylus cantonensis by implantable spinal cord stimulator. Australian & New Zealand Journal of Medicine, 29(4), 565.

1995

Journal - Research Article

Crump, J. A., Beard, M. E. J., Angus, H. B., Fraser, R., Hart, D., & Nicholls, M. G. (1995). Acute adrenal insufficiency: A new presentation of Castleman's disease [Case report]. Journal of Internal Medicine, 238, 81-84. doi: 10.1111/j.1365-2796.1995.tb00903.x