2023
Journal - Research Other
Zalloua, P., Elias, N., Senovska, A., Collins, C., Gosling, A., Karam, S., … Matisoo-Smith, E. (2023). Ancient DNA investigation of the 17 Maronite patriarchs of Qanubin. Journal of Cultural Heritage, 60, 108-113. doi: 10.1016/j.culher.2022.12.006
Conference Contribution - Published proceedings: Abstract
Whitelaw, B. L., Wellenreuther, M., Russell, J. C., & Collins, C. J. (2023). Genomic strategies for avian survival: Unravelling rat population dynamics to protect New Zealand’s (Aotearoa) feathered taonga. Proceedings of the Genetics Otago (GO) Annual Symposium & Workshops. Retrieved from https://blogs.otago.ac.nz/go
van Os, M., Tucker, B., Anderson, A., Knapp, M., Collins, C., & Greig, K. (2023). What’s in that poo? Metagenomic screening of kurī palaeofaeces from Whenua Hou. Proceedings of the Genetics Otago (GO) Annual Symposium & Workshops. Retrieved from https://blogs.otago.ac.nz/go
van Os, M., Cross, H., Kardailsky, O., Jeunen, G.-J., Collins, C., McDonald, K., Kinaston, R., Vlok, M., Walter, R., Cook, G., Aung, H. L., Matisoo-Smith, L., Buckley, H., & Knapp, M. (2023). The conundrum of related taxa: Detection and authentication of pathogen DNA in bioarchaeological samples from the Pacific. Proceedings of the 1st Australian & New Zealand Environmental DNA (eDNA) Conference: Innovation & Application. Retrieved from https://ednaconference.com.au
Conference Contribution - Verbal presentation and other Conference outputs
Whitelaw, B. L., Wellenreuther, M., Russell, J. C., & Collins, C. J. (2023, August-September). Rodent romance gone awry: Infertility as the key to rat retreat. Verbal presentation at the He taonga tuku iho: Queenstown Molecular Biology (QMB) Bioprotection Aotearoa Satellite, Queenstown, New Zealand.
2022
Conference Contribution - Published proceedings: Abstract
van Os, M., Cross, H., Kardailsky, O., Collins, C., Walter, R., Cook, G., Aung, H. L., Matisoo-Smith, L., Buckley, H., & Knapp, M. (2022). Pathogen hunters: Using ancient DNA to authenticate the presence of Mycobacterium tuberculosis and other microbes in early Polynesian settlers of Aotearoa New Zealand. Proceedings of the Genetics Otago (GO) Annual Symposium. Retrieved from https://blogs.otago.ac.nz/go
van Os, M., Cross, H., Kardailsky, O., Collins, C., Walter, R., Cook, G., Aung, H. L., Matisoo-Smith, L., Buckley, H., & Knapp, M. (2022). Pathogen hunters: Using ancient DNA to authenticate the presence of Mycobacterium tuberculosis and other microbes in early Polynesian settlers of Aotearoa New Zealand. Proceedings of the New Zealand Archaeological Association (NZAA) Annual Conference. (pp. 39). Retrieved from https://nzarchaeology.org
Conference Contribution - Verbal presentation and other Conference outputs
Collins, C., Gosling, A., & Matisoo-Smith, L. (2022, August-September). Kiore and their contribution to understanding the movement of people across the Pacific. Verbal presentation at the 31st Queenstown Molecular Biology Meeting (QMB), Queenstown, New Zealand.
2021
Journal - Research Article
Knapp, M., Collins, C. J., & Matisoo-Smith, E. (2021). Ancient invaders: How Paleogenetic tools help to identify and understand biological invasions of the past. Annual Review of Ecology, Evolution & Systematics, 52, 111-129. doi: 10.1146/annurev-ecolsys-012021-100938
King, C. L., Buckley, H. R., Petchey, P., Roberts, P., Zech, J., Kinaston, R., Collins, C., Kardailsky, O., Matisoo-Smith, E., & Nowell, G. (2021). An isotopic and genetic study of multi-cultural colonial New Zealand. Journal of Archaeological Science, 128, 105337. doi: 10.1016/j.jas.2021.105337
Conference Contribution - Published proceedings: Abstract
van Os, M., Cross, H., Kardailsky, O., Collins, C., McDonald, K., Kinaston, R., Vlok, M., Walter, R., Cook, G., Aung, H. L., Matisoo-Smith, L., Buckley, H., & Knapp, M. (2021). Tuberculosis or soil bacteria? Detection and authentication of highly degraded M. tuberculosis DNA in bioarchaeological remains from the Pacific. Proceedings of the Genetics Otago (GO) Annual Symposium. Retrieved from https://blogs.otago.ac.nz/go
Conference Contribution - Verbal presentation and other Conference outputs
Collins, C. (2021, June). Insights into the settlement of Aotearoa utilising modern and ancient DNA datasets. Verbal presentation at the Second Ira Rangahau Māori Symposium, Dunedin, New Zealand.
2020
Journal - Research Article
Ferreira, S., Ashby, R., Jeunen, G.-J., Rutherford, K., Collins, C., Todd, E. V., & Gemmell, N. J. (2020). DNA from mollusc shell: A valuable and underutilised substrate for genetic analyses. PeerJ, 8, e9420. doi: 10.7717/peerj.9420
Lord, E., Collins, C., deFrance, S., LeFebvre, M. J., Pigière, F., Eeckhout, P., … Matisoo-Smith, E. (2020). Ancient DNA of guinea pigs (Cavia spp.) indicates a probable new center of domestication and pathways of global distribution. Scientific Reports, 10, 8901. doi: 10.1038/s41598-020-65784-6
Journal - Research Other
McDonald, S. K., Matisoo-Smith, E. A., Buckley, H. R., Walter, R. K., Aung, H. L., Collins, C. J., Cook, G. M., Kardailsky, O., Krause, K., & Knapp, M. (2020). 'TB or not TB': The conundrum of pre-European contact tuberculosis in the Pacific. Philosophical Transactions of the Royal Society B, 375, 20190583. doi: 10.1098/rstb.2019.0583
2019
Conference Contribution - Verbal presentation and other Conference outputs
Collins, C. (2019, October). Insights into the genomics of the first New Zealanders utilising modern and ancient DNA datasets. Verbal presentation at the University of Otago's Biennial Māori Research Symposium: Hui Poutama, Dunedin, New Zealand.
2018
Journal - Research Article
Zalloua, P., Collins, C. J., Gosling, A., Biagini, S. A., Costa, B., Kardailsky, O., … Matisoo-Smith, E. (2018). Ancient DNA of Phoenician remains indicates discontinuity in the settlement history of Ibiza. Scientific Reports, 8, 17567. doi: 10.1038/s41598-018-35667-y
Greig, K., Gosling, A., Collins, C. J., Boocock, J., McDonald, K., Addison, D. J., … Higham, C. F. W., … Walter, R., & Matisoo-Smith, E. (2018). Complex history of dog (Canis familiaris) origins and translocations in the Pacific revealed by ancient mitogenomes. Scientific Reports, 8, 9130. doi: 10.1038/s41598-018-27363-8
Matisoo-Smith, E., Gosling, A. L., Platt, D., Kardailsky, O., Prost, S., Cameron-Christie, S., Collins, C. J., … Zalloua, P. (2018). Ancient mitogenomes of Phoenicians from Sardinia and Lebanon: A story of settlement, integration, and female mobility. PLoS ONE, 13(1), e0190169. doi: 10.1371/journal.pone.0190169
Lord, E., Collins, C., deFrance, S., LeFebvre, M. J., & Matisoo-Smith, E. (2018). Complete mitogenomes of ancient Caribbean Guinea pigs (Cavia porcellus). Journal of Archaeological Science: Reports, 17, 678-688. doi: 10.1016/j.jasrep.2017.12.004
Conference Contribution - Published proceedings: Abstract
deFrance, S., Lord, E., LeFebvre, M., Collins, C., & Matisoo-Smith, E. (2018). To the Caribbean and beyond: Complete mitogenomes of ancient guinea pigs (Cavia porcellus) as a proxy for human interaction in the late Ceramic Age. Proceedings of the Society for American Archaeology (SAA) 83rd Annual Meeting. (pp. 117). Washington, DC: Society for American Archaeology. Retrieved from http://www.saa.org
2017
Journal - Research Article
Clark, A. L., King, C. L., Buckley, H. R., Collins, C. J., Dhavale, N., Elliott, G. E., Gosling, A., Halcrow, S. E., … Matisoo-Smith, E., … Tromp, M., Ward, S., & West, K. (2017). Biological anthropology in the indo-pacific region: New approaches to age-old questions. Journal of Indo-Pacific Archaeology, 41, 78-94.
West, K., Collins, C., Kardailsky, O., Kahn, J., Hunt, T. L., Burley, D. V., & Matisoo-Smith, E. (2017). The Pacific rat race to Easter Island: Tracking the prehistoric dispersal of Rattus exulans using ancient mitochondrial genomes. Frontiers in Ecology & Evolution, 5, 52. doi: 10.3389/fevo.2017.00052
Collins, C. J., Chilvers, B. L., Osborne, A., Taylor, M., & Robertson, B. C. (2017). Unique and isolated: Population structure has implications for management of the endangered New Zealand sea lion. Conservation Genetics, 18(5), 1177-1189. doi: 10.1007/s10592-017-0969-z
Conference Contribution - Verbal presentation and other Conference outputs
Collins, C. J., Posth, C., Krause, J., & Matisoo-Smith, E. A. (2017, September). Insights into the settlement of New Zealand utilising modern and ancient DNA datasets. Verbal presentation at the Queenstown Molecular Biology (QMB) Meetings, Queenstown, New Zealand.
2016
Journal - Research Article
Rawlence, N. J., Collins, C. J., Anderson, C. N. K., Maxwell, J. J., Smith, I. W. G., Robertson, B. C., Knapp, M., Horsburgh, K. A., Stanton, J.-A. L., Scofield, R. P., … Matisoo-Smith, E. A., & Waters, J. M. (2016). Human-mediated extirpation of the unique Chatham Islands sea lion and implications for the conservation management of remaining New Zealand sea lion populations. Molecular Ecology, 25(16), 3950-3961. doi: 10.1111/mec.13726
Collins, C. J., Chilvers, B. L., Taylor, M., & Robertson, B. C. (2016). Historical population size of the threatened New Zealand sea lion Phocarctos hookeri. Journal of Mammalogy, 97(2), 436-443. doi: 10.1093/jmammal/gyv187
Conference Contribution - Published proceedings: Abstract
Collins, C., Millar, C., Lambert, D., & Matisoo-Smith, L. (2016). A genomic study of the people of Wairau Bar. Proceedings of the New Zealand Archaeological Association (NZAA) Conference. Retrieved from http://nzarchaeology.org/cms/index.php/conferences
Buckley, H. R., Kinaston, R., Knapp, M., Cook, G., Collins, C., Walter, R., Halcrow, S., & Matisoo-Smith, L. (2016). An osteobiography of a middle aged male from Wairau Bar: Exploring metabolic and infectious disease in prehistoric Polynesians. Proceedings of the New Zealand Archaeological Association (NZAA) Conference. Retrieved from http://nzarchaeology.org/cms/index.php/conferences
2015
Journal - Research Article
Yund, P. O., Collins, C., & Johnson, S. L. (2015). Evidence of a Native Northwest Atlantic COI haplotype clade in the cryptogenic colonial ascidian Botryllus schlosseri. Biological Bulletin, 228(3), 201-216.
Conference Contribution - Verbal presentation and other Conference outputs
Matisoo-Smith, E. A., Gosling, A., & Collins, C. (2015, August-September). Ancient DNA analysis in the Pacific: Implications for human settlement history. Verbal presentation at the Queenstown Molecular Biology (QMB) Meetings, Queenstown, New Zealand.
2014
Journal - Research Article
Collins, C. J., Rawlence, N. J., Prost, S., Anderson, C. N. K., Knapp, M., Scofield, R. P., Robertson, B. C., Smith, I., Matisoo-Smith, E. A., … Waters, J. M. (2014). Extinction and recolonization of coastal megafauna following human arrival in New Zealand. Proceedings of the Royal Society B, 281, 20140097. doi: 10.1098/rspb.2014.0097
Rawlence, N. J., Till, C. E., Scofield, R. P., Tennyson, A. J. D., Collins, C. J., Lalas, C., … Matisoo-Smith, E., Waters, J. M., Spencer, H. G., & Kennedy, M. (2014). Strong phylogeographic structure in a sedentary seabird, the Stewart Island Shag (Leucocarbo chalconotus). PLoS ONE, 9(3), e90769. doi: 10.1371/journal.pone.0090769
Collins, C. J., Rawlence, N. J., Worthy, T. H., Scofield, R. P., Tennyson, A. J. D., Smith, I., Knapp, M., & Waters, J. M. (2014). Pre-human New Zealand sea lion (Phocarctos hookeri) rookeries on mainland New Zealand. Journal of the Royal Society of New Zealand, 44(1), 1-16. doi: 10.1080/03036758.2013.828761
Awarded Doctoral Degree
Collins, C. J. (2014). Phylogeography and population structure of the New Zealand sea lion, Phocarctos hookeri (PhD). University of Otago, Dunedin, New Zealand. Retrieved from http://hdl.handle.net/10523/4628
2013
Conference Contribution - Published proceedings: Abstract
Collins, C., Rawlence, N., Knapp, M., Schofield, P., Robertson, B., Smith, I., … Matisoo-Smith, E., & Waters, J. (2013). The genetic effects of extinction-recolonisation in the New Zealand sea lion following historic hunting. Proceedings of the 20th Biennial Conference on the Biology of Marine Mammals. (pp. 46-47). Retrieved from http://www.marinemammalscience.org/
Conference Contribution - Verbal presentation and other Conference outputs
Collins, C., Knapp, M., Robertson, B., Matisoo-Smith, L., & Waters, J. (2013, January). Assessing the impact of human settlement and historic hunting on the New Zealand sea lion, Phocarctos hookeri, using ancient DNA analyses. Verbal presentation at the VII Southern Connection Congress: Southern Lands and Southern Oceans: Life on the Edge? Dunedin, New Zealand.
2010
Journal - Research Article
Collins, C. J., Fraser, C. I., Ashcroft, A., & Waters, J. M. (2010). Asymmetric dispersal of southern bull-kelp (Durvillaea antarctica) adults in coastal New Zealand: Testing an oceanographic hypothesis. Molecular Ecology, 19(20), 4572-4580. doi: 10.1111/j.1365-294X.2010.04842.x
