Professor Michael Baker, Department of Public Health, Our people, University of Otago, Wellington, University of Otago, New Zealand

MBChB, FNZCPHM, FAFPHM, FRACMA, DComH, DObst

Michael Baker image 2020

Professor of Public Health; Director, Health Environment Infection Research Unit (HEIRU); Co-Director, He Kainga Oranga/Housing and Health Research Programme; Co-Director, Public Health Summer School

Teaches PUBH734 Health Protection

Contact details
Research interests and activities
Publications

Contact details

Tel +64 4 918 6802
Fax +64 4 389 5319
Email michael.baker@otago.ac.nz

Research interests and activities

Michael is a public health physician and Professor in the Department of Public Health. He is passionate about opportunities to organise society in ways that promote health, equity and sustainability.

In 2013 Michael was awarded the Liley Medal (Health Research Council) for his contribution to the health and medical sciences. In 2014 he was a recipient of the Prime Minister’s Science Prize as a member of He Kainga Oranga / Housing and Health Research Programme. In 2015 he was the NZ-UK Link Foundation Visiting Professor at the School of Advanced Study (SAS), University of London.

His work during 2020-21 has been dominated by assisting with the Covid-19 pandemic response. Michael is a member of the Ministry of Health’s Covid-19 Technical Advisory Group and has been a leading architect and advocate for the Covid-19 elimination strategy. He established a programme of research on the epidemiology, prevention and control of Covid-19 in NZ and internationally (Co-Search), which has generated a large amount of published research and commentary aimed at improving the pandemic response.

Michael’s work on public health, and the Covid-19 response in particular, was recognised by a number of recent awards including: the Critic and Conscience of Society Award (from Universities NZ), the Public Health Champion award (from the Public Health Association of NZ), being made a Member of the NZ Order of Merit (MNZM), his selection as the 2020 Wellingtonian of the Year, and the Prime Minister’s Science Communication Prize in 2021.

Michael has a wide range of public health research interests, with a focus on infectious diseases, environmental health, and improving housing conditions. Specific research areas include:

infectious disease epidemiology
The COVID‑19 pandemic, including epidemiology, elimination strategy, control measures
emerging infectious diseases, including pandemic influenza
food safety and enteric diseases, e.g. campylobacteriosis
zoonoses and One Health
immunisation and vaccine preventable diseases
health effects of household crowding, healthy housing
rheumatic fever, skin infections, chronic effects of infectious diseases
seasonality of disease, health effects of climate change, e.g. on infectious diseases
environmental health, drinking water quality, water pollutants, e.g. nitrates
drug law reform and harm minimisation, e.g. needle exchange programme
public health services organisation and capacity, e.g. surveillance and outbreak investigation
global health security, e.g. the International Health Regulations (IHR 2005)
science communication

Michael has worked in a range of roles, including being a medical advisor to a Minister of Health, for regional public health services, at a Crown Research Institute (ESR), and for the World Health Organisation in Manila and Geneva. Since 2003 he has been based full-time at the University of Otago, Wellington. Specific positions include:

Director, Health Environment Infection Research Unit (HEIRU)
Co-Director of He Kainga Oranga / Housing and Health Research Programme
Co-Director, University of Otago Public Health Summer School
Lead Investigator, Co-Search Programme
Principal Investigator, SYMBIOTIC Programme (Health Research Council funded)
Chief Investigator, Integrated Systems for Epidemic Response (ISER), an NHMRC Centre for Research Excellence, University of NSW
Convenor, University of Otago Health Protection paper (PUBH734)
Member of the Ministry of Health’s COVID-19 Technical Advisory Group (TAG)
Member of the Advisory Board of the Science Media Centre (SMC)
Board Member of the NZ Drug Foundation
Member of the World Health Organisation (WHO) Regional Verification Commission for Measles Elimination

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Publications

Chambers, T., Hales, S., Shaw, C., Baker, M., Ball, J., Cleghorn, C., & Wilson, N. (2021). New Zealand's Climate Change Commission report: The critical need to address the missing health co-benefits of reducing emissions. New Zealand Medical Journal, 134(1542), 109-118. Retrieved from https://www.nzma.org.nz/journal

Grout, L., Katar, A., Ouakrim, D. A., Summers, J. A., Kvalsvig, A., Baker, M. G., Blakely, T., & Wilson, N. (2021). Failures of quarantine systems for preventing COVID-19 outbreaks in Australia and New Zealand. Medical Journal of Australia. Advance online publication. doi: 10.5694/mja2.51240

Nguyen, T., Adnan, M., Nguyen, B. P., de Ligt, J., Geoghegan, J. L., Dean, R., … Baker, M. G., … Murdoch, D. R., … Simpson, C. R. (2021). COVID-19 vaccine strategies for Aotearoa New Zealand: A mathematical modelling study. Lancet Regional Health: Western Pacific, 15, 100256. doi: 10.1016/j.lanwpc.2021.100256

Carlton, L. H., Chen, T., Whitcombe, A. L., McGregor, R., Scheurich, G., Sheen, C. R., … Baker, M. G., … Moreland, N. J. (2021). Charting elimination in the pandemic: A SARS-CoV-2 serosurvey of blood donors in New Zealand [Short paper]. Epidemiology & Infection, 149, e173. doi: 10.1017/s0950268821001643

Keall, M. D., Tupara, H., Pierse, N., Wilkie, M., Baker, M. G., Howden-Chapman, P., & Cunningham, C. (2021). Home modifications to prevent home fall injuries in houses with Māori occupants (MHIPI): A randomised controlled trial. Lancet Public Health, 6(9), e631-e640. doi: 10.1016/s2468-2667(21)00135-3

Howden-Chapman, P., Chisholm, E., Telfar Barnard, L., Viggers, H., O'Sullivan, K., Bennett, J., Bierre, S., Preval, N., Randal, E., Tiatia, R., Ombler, J., Amore, K., Rivera-Muñoz, G., … Davies, C., Aspinall, C., Oliver, J., Baker, M., Keall, M., … Crane, J., & Pierse, N. (2017). Housing, energy and health in resilient cities. In P. Howden-Chapman, L. Early & J. Ombler (Eds.), Cities in New Zealand: Preferences, patterns and possibilities. (pp. 95-106). Wellington, New Zealand: Steele Roberts Aotearoa.

Chapter in Book - Research

Baker, M., Zhang, J., & Howden-Chapman, P. (2013). The health effects of social housing: The Social Housing Outcomes Worth study. In S. Bierre, P. Howden-Chapman & L. Early (Eds.), Homes people can afford: How to improve housing in New Zealand. (pp. 33-40). Wellington, New Zealand: Steele Roberts Aotearoa.

Chapter in Book - Research

Harris, R., Purdie, G., Robson, B., Wright, C., Zhang, J., & Baker, M. (2007). Appendix 3: Estimating Māori hospitalisations and cancer registrations. In B. Robson & R. Harris (Eds.), Hauora: Māori standards of health IV: A study of the years 2000-2005. (pp. 249-259). Wellington, New Zealand: Te Rōpū Rangahau Hauora a Eru Pōmare, University of Otago.

Chapter in Book - Research

Baker, M., Milosevic, J., Blakely, T., & Howden-Chapman, P. (2004). Housing, crowding and health. In P. Howden-Chapman & P. Carroll (Eds.), Housing & health: Research, policy and innovation. (pp. 57-69). Wellington, New Zealand: Steele Roberts.

Chapter in Book - Research

Howden-Chapman, P., Crane, J., Baker, M., Cunningham, C., & Matheson, A. (2004). Reducing health inequality through improving housing: He Kainga Oranga/ Housing and Health Research Programme. In P. Howden-Chapman & P. Carroll (Eds.), Housing & health: Research, policy and innovation. (pp. 83-92). Wellington, New Zealand: Steele Roberts.

Chapter in Book - Research

Baker, M. G., Goodyear, R., & Howden-Chapman, P. L. (2003). Household crowding and health. In What is the extent of crowding in New Zealand?: An analysis of crowding in New Zealand households 1986-2001. (pp. 58-87). Wellington: Statistics New Zealand.

Chapter in Book - Research

Martin, D., Walker, S. J., Baker, M. G., Roberts, A., & Lennon, D. R. (1996). Epidemic of serogroup B meningococcal disease in New Zealand has parallels with that observed in the Netherlands, 1980-1990. In W. D. Zollinger, C. E. Frasch & C. D. Deal (Eds.), Pathogenic Neisseria. (pp. 496-497). Baltimore, Maryland: National Institute of Health.

Chapter in Book - Research

Baker, M. (2002). Immunisations and malaria prophylaxis for travellers. In New Ethicals Catalogue 1997-2002. Auckland, New Zealand: Adis International.

Chapter in Book - Other

Ammar, S. E., McIntyre, M., Baker, M. G., & Hales, S. (2021). Imported arboviral infections in New Zealand, 2001 to 2017: A risk factor for local transmission. Travel Medicine & Infectious Disease, 102047. Advance online publication. doi: 10.1016/j.tmaid.2021.102047

Journal - Research Article

Bennett, J., Zhang, J., Leung, W., Jack, S., Oliver, J., Webb, R., … Sika-Paotonu, D., Harwood, M., & Baker, M. G. (2021). Rising ethnic inequalities in acute rheumatic fever and rheumatic heart disease, New Zealand, 2000-2018. Emerging Infectious Diseases, 27(1), 36-46. doi: 10.3201/eid2701.191791

Journal - Research Article

Choi, K., Giridharan, N., Cartmell, A., Lum, D., Signal, L., Puloka, V., Crossin, R., Gray, L., Davies, C., Baker, M., & Kvalsvig, A. (2021). Life during lockdown: A qualitative study of low-income New Zealanders' experience during the COVID-19 pandemic. New Zealand Medical Journal, 134(1538), 52-67. Retrieved from https://www.nzma.org.nz/journal

Journal - Research Article

Geoghegan, J. L., Douglas, J., Ren, X., Storey, M., Hadfield, J., Silander, O. K., … Baker, M. G., Murdoch, D. R., … de Ligt, J. (2021). Use of genomics to track Coronavirus disease outbreaks, New Zealand. Emerging Infectious Diseases, 27(5), 1317-1322. doi: 10.3201/eid2705.204579

Journal - Research Article

Gray, L., Rose, S. B., Stanley, J., Zhang, J., Tassell-Matamua, N., Puloka, V., Kvalsvig, A., … Murton, S. A., … Baker, M. G. (2021). Factors influencing individual ability to follow physical distancing recommendations in Aotearoa New Zealand during the COVID-19 pandemic: A population survey. Journal of the Royal Society of New Zealand. Advance online publication. doi: 10.1080/03036758.2021.1879179

Journal - Research Article

Huang, Q. S., Wood, T., Jelley, L., Jennings, T., Jefferies, S., Daniells, K., Nesdale, A., Dowell, T., Turner, N., Campbell-Stokes, P., Balm, M., Dobinson, H. C., … Baker, M. G., … Werno, A., Grant, J., van der Linden, A., … Webby, R. J. (2021). Impact of the COVID-19 nonpharmaceutical interventions on influenza and other respiratory viral infections in New Zealand. Nature Communications, 12(1), 1001. doi: 10.1038/s41467-021-21157-9

Journal - Research Article

Kvalsvig, A., & Baker, M. G. (2021). How Aotearoa New Zealand rapidly revised its Covid-19 response strategy: Lessons for the next pandemic plan. Journal of the Royal Society of New Zealand. Advance online publication. doi: 10.1080/03036758.2021.1891943

Journal - Research Article

Lorenz, N., Ho, T. K. C., McGregor, R., Davies, M. R., Williamson, D. A., Gurney, J. K., … Baker, M. G., & Moreland, N. J. (2021). Serological profiling of group A streptococcus infections in acute rheumatic fever. Clinical Infectious Diseases. Advance online publication. doi: 10.1093/cid/ciab180

Journal - Research Article

McGregor, R., Tay, M. L., Carlton, L. H., Hanson-Manful, P., Raynes, J. M., Forsyth, W. O., … Baker, M. G., & Moreland, N. J. (2021). Mapping autoantibodies in children with acute rheumatic fever. Frontiers in Immunology, 12, 702877. doi: 10.3389/fimmu.2021.702877

Journal - Research Article

Oliver, J., Robertson, O., Zhang, J., Marsters, B. L., Sika-Paotonu, D., Jack, S., Bennett, J., Williamson, D. A., … Pierse, N., & Baker, M. G. (2021). Early release-ethnically disparate disease progression and outcomes among acute rheumatic fever patients in New Zealand, 1989–2015. Emerging Infectious Diseases, 27(7), 1893-1901. doi: 10.3201/eid2707.203045

Journal - Research Article

Pilapitiya, D. H., Harris, P. W. R., Hanson-Manful, P., McGregor, R., Kowalczyk, R., Raynes, J. M., … Baker, M. G., … Moreland, N. J. (2021). Antibody responses to collagen peptides and streptococcal collagen-like 1 proteins in acute rheumatic fever patients. Pathogens & Disease, 79, ftab033. doi: 10.1093/femspd/ftab033

Journal - Research Article

Riggs, L., Keall, M., Howden-Chapman, P., & Baker, M. G. (2021). Environmental burden of disease from unsafe and substandard housing, New Zealand, 2010-2017. Bulletin of the World Health Organization, 99, 259-270. doi: 10.2471/BLT.20.263285

Journal - Research Article

Robertson, O., Nathan, K., Howden-Chapman, P., Baker, M. G., Atatoa Carr, P., & Pierse, N. (2021). Residential mobility for a national cohort of New Zealand-born children by area socioeconomic deprivation level and ethnic group. BMJ Open, 11, e039706. doi: 10.1136/bmjopen-2020-039706

Journal - Research Article

Shackleton, N., Li, E., Gibb, S., Kvalsvig, A., Baker, M., Sporle, A., … Milne, B. J. (2021). The relationship between income poverty and child hospitalisations in New Zealand: Evidence from longitudinal household panel data and Census data. PLoS ONE, 16(1), e0243920. doi: 10.1371/journal.pone.0243920

Journal - Research Article

Thomas, S., Bennett, J., Jack, S., Oliver, J., Purdie, G., Upton, A., & Baker, M. G. (2021). Descriptive analysis of group A Streptococcus in skin swabs and acute rheumatic fever, Auckland, New Zealand, 2010–2016. Lancet Regional Health: Western Pacific, 8, 100101. doi: 10.1016/j.lanwpc.2021.100101

Journal - Research Article

Wilson, N., Baker, M. G., Blakely, T., & Eichner, M. (2021). Estimating the impact of control measures to prevent outbreaks of COVID-19 associated with air travel into a COVID-19-free country. Scientific Reports, 11(1), 10766. doi: 10.1038/s41598-021-89807-y

Journal - Research Article

Wilson, N., Blakely, T., Baker, M. G., & Eichner, M. (2021). Estimating the risk of outbreaks of COVID-19 associated with shore leave by merchant ship crews: Simulation studies for New Zealand. New Zealand Medical Journal, 134(1529), 26-38. Retrieved from https://www.nzma.org.nz/journal

Journal - Research Article

Adnan, M., Gao, X., Bai, X., Newbern, E., Sherwood, J., Jones, N., Baker, M., … Gao, W. (2020). Potential early identification of a large campylobacter outbreak using alternative surveillance data sources: Autoregressive modelling and spatiotemporal clustering. JMIR Public Health & Surveillance, 6(3), e18281. doi: 10.2196/18281

Journal - Research Article

Baker, M. G., Grout, L., & Wilson, N. (2020). Update on the campylobacter epidemic from chicken meat in New Zealand: The urgent need for an upgraded regulatory response. Epidemiology & Infection. Advance online publication. doi: 10.1017/s095026882000299x

Journal - Research Article

Cannon, J., Zhung, J., Bennett, J., Moreland, N. J., Baker, M. G., Geelhoed, E., … Jack, S. (2020). The economic and health burden of disease caused by Group A Streptococcus in New Zealand. International Journal of Infectious Diseases. Advance online publication. doi: 10.1016/j.ijid.2020.11.193

Journal - Research Article

Chung, A. W., Ho, T. K. C., Hanson-Manful, P., Tritscheller, S., Raynes, J. M., Whitcombe, A. L., … Oliver, J. R., Gurney, J. K., … Baker, M. G., & Moreland, N. J. (2020). Systems immunology reveals a linked IgG3-C4 response in patients with acute rheumatic fever. Immunology & Cell Biology, 98, 12-21. doi: 10.1111/imcb.12298

Journal - Research Article

Geoghegan, J. L., Ren, X., Storey, M., Hadfield, J., Jelley, L., Jefferies, S., … Baker, M. G., Murdoch, D. R., … de Ligt, J. (2020). Genomic epidemiology reveals transmission patterns and dynamics of SARS-CoV-2 in Aotearoa New Zealand. Nature Communications, 11(1), 6351. doi: 10.1038/s41467-020-20235-8

Journal - Research Article

Gilpin, B. J., Walker, T., Paine, S., Sherwood, J., Mackereth, G., Wood, T., … Baker, M. G., & Jones, N. (2020). A large scale waterborne Campylobacteriosis outbreak, Havelock North, New Zealand. Journal of Infection, 81, 390-395. doi: 10.1016/j.jinf.2020.06.065

Journal - Research Article

Graham, F. F., Hales, S., White, P. S., & Baker, M. G. (2020). Global seroprevalence of legionellosis: A systematic review and meta-analysis. Scientific Reports, 10, 7337. doi: 10.1038/s41598-020-63740-y

Journal - Research Article

Gray, L., MacDonald, C., Tassell-Matamua, N., Stanley, J., Kvalsvig, A., Zhang, J., Murton, S., … Puloka, V., … Baker, M. G. (2020). Wearing one for the team: Views and attitudes to face covering in New Zealand/Aotearoa during COVID-19 Alert Level 4 lockdown. Journal of Primary Health Care, 12(3), 199-206. doi: 10.1071/HC20089

Journal - Research Article

Lake, R. J., Campbell, D. M., Hathaway, S. C., Ashmore, E., Cressey, P. J., Horn, B. J., … Baker, M. G., … French, N. P. (2020). Source attributed case-control study of campylobacteriosis in New Zealand. International Journal of Infectious Diseases. Advance online publication. doi: 10.1016/j.ijid.2020.11.167

Journal - Research Article

McGregor, R., Whitcombe, A. L., Sheen, C. R., Dickson, J. M., Day, C. L., Carlton, L. H., … Bennett, J., Baker, M. G., … Moreland, N. J. (2020). Collaborative networks enable the rapid establishment of serological assays for SARS-CoV-2 during nationwide lockdown in New Zealand. PeerJ, 8, e9863. doi: 10.7717/peerj.9863

Journal - Research Article

Nisa, S., Wilkinson, D. A., Angelin-Bonnet, O., Paine, S., Cullen, K., Wight, J., Baker, M. G., & Benschop, J. (2020). Diverse epidemiology of Leptospira serovars notified in New Zealand, 1999-2017. Pathogens, 9, 841. doi: 10.3390/pathogens9100841

Journal - Research Article

Oliver, J., Upton, A., Jack, S. J., Pierse, N., Williamson, D. A., & Baker, M. G. (2020). Distribution of streptococcal pharyngitis and acute rheumatic fever, Auckland, New Zealand, 2010-2016. Emerging Infectious Diseases, 26(6), 1113-1121. doi: 10.3201/eid2606.181462

Journal - Research Article

Pierse, N., White, M., Ombler, J., Davis, C., Chisholm, E., Baker, M., & Howden-Chapman, P. (2020). Well Homes Initiative: A home-based intervention to address housing-related ill health. Health Education & Behavior, 47(6), 836-844. doi: 10.1177/1090198120911612

Journal - Research Article

Prasad, N., Walker, T. A., Waite, B., Wood, T., Trenholme, A. A., Baker, M. G., … Newbern, E. C. (2020). Respiratory syncytial virus associated hospitalizations among adults with chronic medical conditions. Clinical Infectious Diseases. Advance online publication. doi: 10.1093/cid/ciaa730

Journal - Research Article

Sanhueza, J. M., Baker, M. G., Benschop, J., Collins-Emerson, J. M., Wilson, P. R., & Heuer, C. (2020). Estimation of the burden of leptospirosis in New Zealand. Zoonoses & Public Health, 67, 167-176. doi: 10.1111/zph.12668

Journal - Research Article

Toombs-Ruane, L. J., Benschop, J., French, N. P., Biggs, P. J., Midwinter, A. C., Marshall, J. C., … Baker, M. G., … Burgess, S. A. (2020). Carriage of extended-spectrum beta-lactamase-and AmpC beta-lactamase-producing Escherichia coli from humans and pets in the same households. Applied & Environmental Microbiology, 86(24), e01213-20. doi: 10.1128/aem.01613-20

Journal - Research Article

Walker, T. A., Waite, B., Thompson, M. G., McArthur, C., Wong, C., Baker, M. G., … Newbern, E. C. (2020). Risk of severe influenza among adults with chronic medical conditions. Journal of Infectious Diseases, 221, 183-190. doi: 10.1093/infdis/jiz570

Journal - Research Article

Whitcombe, A. L., Hanson-Manful, P., Jack, S., Upton, A., Atatoa Carr, P., Williamson, D. A., Baker, M. G., … Moreland, N. J. (2020). Development and evaluation of a new triplex immunoassay that detects Group A Streptococcus antibodies for the diagnosis of rheumatic fever. Journal of Clinical Microbiology, 58(9), e00300-20. doi: 10.1128/jcm.00300-20

Journal - Research Article

Wilson, N., Boyd, M., Kvalsvig, A., Chambers, T., & Baker, M. (2020). Public health aspects of the Covid-19 response and opportunities for the post-pandemic era. Policy Quarterly, 16(3), 20-24.

Journal - Research Article

Wilson, N., Schwehm, M., Verrall, A. J., Parry, M., Baker, M. G., & Eichner, M. (2020). Detecting the re-emergent COVID-19 pandemic after elimination: Modelling study of combined primary care and hospital surveillance. New Zealand Medical Journal, 133(1524), 28-39. Retrieved from https://www.nzma.org.nz/journal

Journal - Research Article

Ammar, S. E., McIntyre, M., Swan, T., Kasper, J., Derraik, J. G. B., Baker, M. G., & Hales, S. (2019). Intercepted mosquitoes at New Zealand's ports of entry, 2001 to 2018: Current status and future concerns. Tropical Medicine & Infectious Disease, 4(3), 101. doi: 10.3390/tropicalmed4030101

Journal - Research Article

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