2017
Journal - Research Article
Zellmer, J., & Jeffs, A. (2017). ACCess mATTers: Trio. Junctures, (18), 22-27.
2016
Journal - Research Article
Marti, H.-P., Jeffs, A., Scherer, A., Leader, J., Leader, C., Bedford, J., & Walker, R. (2016). Renal fibrosis mRNA classifier: Validation in experimental lithium-induced interstitial fibrosis in the rat kidney. PLoS ONE, 11(12), e0168240. doi: 10.1371/journal.pone.0168240
2014
Journal - Research Article
Macaulay, E. C., Roberts, H. E., Cheng, X., Jeffs, A. R., Baguley, B. C., & Morison, I. M. (2014). Retrotransposon hypomethylation in melanoma and expression of a placenta-specific gene. PLoS ONE, 9(4), e95840. doi: 10.1371/journal.pone.0095840
Morris, J. N., Crawford, T. S., Jeffs, A., Stockwell, P. A., Eaton-Rye, J. J., & Summerfield, T. C. (2014). Whole genome re-sequencing of two ‘wild-type’ strains of the model cyanobacterium Synechocystis sp. PCC 6803. New Zealand Journal of Botany, 52(1), 36-47. doi: 10.1080/0028825X.2013.846267
2013
Journal - Research Article
Eccles, M. R., He, S., Ahn, A., Slobbe, L. J., Jeffs, A. R., Yoon, H.-S., & Baguley, B. C. (2013). MITF and PAX3 play distinct roles in melanoma cell migration: Outline of a “genetic switch” theory involving MITF and PAX3 in proliferative and invasive phenotypes of melanoma. Frontiers in Oncology, 3, 229. doi: 10.3389/fonc.2013.00229
Awasthi, A., Woolley, A. G., Lecomte, F. J., Hung, N., Baguley, B. C., Wilbanks, S. M., Jeffs, A. R., & Tyndall, J. D. A. (2013). Variable expression of GLIPR1 correlates with invasive potential in melanoma cells. Frontiers in Oncology, 3, 225. doi: 10.3389/fonc.2013.00225
2012
Journal - Research Article
Campbell, H. G., Slatter, T. L., Jeffs, A., Mehta, R., Rubio, C., Baird, M., & Braithwaite, A. W. (2012). Does Δ133p53 isoform trigger inflammation and autoimmunity? Cell Cycle, 11(3), 446-450. doi: 10.4161/cc.11.3.19054
Conference Contribution - Published proceedings: Abstract
Anagnostopoulou, A., Walker, R., Jeffs, A., Scherer, A., Bedford, J., Leader, J., … Marti, H.-P. (2012). A subset of metzincins and related genes constitutes a marker of solid organ fibrosis across species. Nephrology Dialysis Transplantation, 27(Suppl. 2), (pp. 44). doi: 10.1093/ndt/gfs198
Marti, H. P., Jeffs, A., Scherer, A., Leader, J., Bedford, J., Davis, G., … Walker, R. (2012). Solid organ fibrosis: Evidence for a common pathway across species! Nephrology, 17(Suppl. 2), (pp. 57). doi: 10.1111/j.1440-1797.2012.01632.x
Conference Contribution - Verbal presentation and other Conference outputs
Campbell, H. G., Rubio, C., Slatter, T. L., Jeffs, A. R., Baird, M., & Braithwaite, A. W. (2012, August). The p53 isoform, Δ133p53 binds to and inhibits the p53 family members, p63 and p73. Verbal presentation at the Queenstown Molecular Biology (QMB) Meetings, Queenstown, New Zealand.
Algie, M., Jeffs, A., Woolley, A., Kleffmann, T., & Braithwaite, A. (2012, August). Identification of binding partners of the oncoprotein Y-box binding protein (YBX1) in breast cancer cell-line. Verbal presentation at the Queenstown Molecular Biology (QMB) Meetings, Queenstown, New Zealand.
Braithwaite, A. W., Baird, M. A., Campbell, H. G., Hung, N. A., Jeffs, A. R., Print, C. G., & Slatter, T. L. (2012, August). Isoforms of the p53 tumour suppressor, inflammation, and cancer. Invited presentation at the Queenstown Molecular Biology (QMB) Meetings, Queenstown, New Zealand.
2011
Journal - Research Article
Slatter, T. L., Hung, N., Campbell, H., Rubio, C., Mehta, R., Renshaw, P., Williams, G., Wilson, M., … Jeffs, A., Royds, J. A., Baird, M. A., & Braithwaite, A. W. (2011). Hyperproliferation, cancer, and inflammation in mice expressing a Δ133p53-like isoform. Blood, 117(19), 5166-5177. doi: 10.1182/blood-2010-11-321851
Conference Contribution - Published proceedings: Abstract
Eccles, M., Print, C., Jeffs, A., He, S., Slobbe, L., & Baguley, B. (2011). Plasticity of melanoma cell differentiation state and switching of migratory potential. Proceedings of the Inaugural International Cancer Symposium. Retrieved from http://www.wnmeds.ac.nz/cancersymposium/programme.html
2010
Conference Contribution - Verbal presentation and other Conference outputs
Jeffs, A. (2010, August-September). GLIPR1 levels correlate with invasive potential in melanoma cells. Verbal presentation at the Queenstown Molecular Biology (QMB) Meetings, Queenstown, New Zealand.
2009
Journal - Research Article
Jeffs, A. R., Glover, A. C., Slobbe, L. J., Wang, L., He, S., Hazlett, J. A., Awasthi, A., Woolley, A. G., … Print, C. G., … Eccles, M. R. (2009). A gene expression signature of invasive potential in metastatic melanoma cells. PLoS ONE, 4(12), e8461. doi: 10.1371/journal.pone.0008461
Jenkins, Z. A., van Kogelenberg, M., Morgan, T., Jeffs, A., Fukuzawa, R., Pearl, E., … Robertson, S. P. (2009). Germline mutations in WTX cause a sclerosing skeletal dysplasia but do not predispose to tumorigenesis. Nature Genetics, 41(1), 95-100. doi: 10.1038/ng.270
Conference Contribution - Published proceedings: Abstract
van Kogelenberg, M., Jenkins, Z. A., Morgan, T., Holman, S., Jeffs, A., Fukuzawa, R., … Reeve, A. E., Robertson, S. P., the OSCS Study Group. (2009). Germline mutations in the tumour suppressor WTX cause a sclerosing bone dysplasia but do not predispose to Wilms tumour. Proceedings of the American Society of Human Genetics 59th Annual Meeting. (pp. 734). Retrieved from http://www.ashg.org/2009meeting/pdf/poster_4up.pdf
Tyndall, J. D. A., Awasthi, A., Jeffs, A., & Wilbanks, S. M. (2009). GLIPR1 is differentially expressed in melanoma cells and correlates with invasive potential. Proceedings of the ComBio2009 Conference. [CD-ROM] [Abstract]
He, S., Li, C. G., Jeffs, A., Glover, A., Yoon, H.-S., Baguley, B., & Eccles, M. R. (2009). Induction of cell death or differentiation by silencing of PAX3 is independent of MITF expression. Proceedings of the American Association for Cancer Research (AACR) 100th Annual Meeting. Retrieved from http://www.aacrmeetingabstracts.org/
Conference Contribution - Verbal presentation and other Conference outputs
Awasthi, A., Tyndall, J. D. A., Jeffs, A., & Wilbanks, S. M. (2009, February). Glioma pathogenesis related protein: A survival factor for gliomas and melanomas. Verbal presentation at the New Zealand Chapter of the Controlled Release Society 11th Conference on Formulation and Delivery of Bioactives, Dunedin, New Zealand.
2008
Journal - Professional & Other Non-Research Articles
Robson, E. J. D., Jeffs, A. R., & Eccles, M. R. (2008). Off-target response to decoy oligodeoxynucleotide treatment. Nature Precedings. doi: 10.1038/npre.2008.2281.1
Conference Contribution - Published proceedings: Abstract
Jeffs, A., Glover, M., He, S., Baguley, B., & Eccles, M. (2008). Gene expression signatures of invasion and survival in melanoma. Proceedings of the 8th Annual Australasian Microarray and Associated Technologies (AMATA) Conference. Retrieved from http://www.amata.org.au/index.php/resources/2008-conference-abstracts
Eccles, M., He, S., Jeffs, A., Li, C., Glover, A., Ineson, J., … Yoon, H.-S., & Baguley, B. (2008). PAX3 and MITF oppositely regulate a melanogenesis nodal point in melanoma cell lines. Proceedings of the American Society of Human Genetics 58th Annual Meeting. (pp. 264). ASHG. Retrieved from http://www.ashg.org/2008meeting/pdf/abstractbook1.pdf
Conference Contribution - Poster Presentation (not in published proceedings)
He, S., Li, C. G., Jeffs, A., Glover, A., Yoon, H.-S., Baguley, B., & Eccles, M. R. (2008, August-September). PAX3 and MITF oppositely regulate cell differentiation and independently confer cell survival. Poster session presented at the Queenstown Molecular Biology Meetings, Queenstown, New Zealand.
Jeffs, A., Glover, A., He, S., Woolley, A., Eccles, M., & Baguley, B. (2008, August-September). Gene expression signatures of invasion in melanoma. Poster session presented at the Queenstown Molecular Biology Meetings, Queenstown, New Zealand.
Conference Contribution - Verbal presentation and other Conference outputs
Awasthi, A., Wilbanks, S. M., Jeffs, A., & Tyndall, J. D. A. (2008, November-December). Is glioma pathogenesis related protein a survival factor for gliomas? Verbal presentation at the New Zealand Institute of Chemistry, New Zealand Society for Biochemistry and Molecular Biology and the New Zealand Society of Plant Biologists Combined Conference, Dunedin, New Zealand.
Jeffs, A., Glover, A., He, S., Eccles, M., & Baguley, B. (2008, August). Gene expression signatures of invasion in melanoma. Verbal presentation at the New Zealand Society for Oncology Conference, Christchurch, New Zealand.
He, S., Jeffs, A., Li, C., Glover, A., Ineson, J., Suh, B.-J., … Yoon, H.-S., … Eccles, M. R. (2008, August). PAX3, MITF and melanoma. Verbal presentation at the New Zealand Society for Oncology Conference, Christchurch, New Zealand.
2007
Conference Contribution - Published proceedings: Abstract
Stayner, C., Ellis, L., Jeffs, A., McGlashan, S. R., Poole, C. A., Jensen, C. G., & Eccles, M. R. (2007). Development of immortalized fibroblast and epithelial cell lines from Pkd1/Pax2 mutant mice. Proceedings of the ISN-Nature Genetics Forefronts Symposium on Nephrogenetics: From Development to Physiology. Retrieved from http://dir.isn-online.org/ISN/forefronts/pages/abstractview.cfm?id=3&page=0
Conference Contribution - Poster Presentation (not in published proceedings)
Li, C., Jeffs, A., He, S., Woolley, A., & Eccles, M. (2007, May). Is there cooperation, interference, or no interaction at all between PAX genes in promoting tumorigenesis? Poster session presented at the New Zealand Society for Oncology Conference, Dunedin, New Zealand.
Glover, A., He, S., Ineson, J., Jeffs, A., Woolley, A., Marshall, E., … Eccles, M. (2007, May). The role of PAX3 in malignant melanoma. Poster session presented at the New Zealand Society for Oncology Conference, Dunedin, New Zealand.
Eccles, M. R., He, S., Ineson, J., Yoon, H.-S., Li, C. G., Jeffs, A., … Baguley, B. (2007, October). Apoptosis induced in human melanoma cells with a PAX3 antisense oligonucleotide is associated with down-regulation of BCL2 and CDK2. Poster session presented at the American Society of Human Genetics 57th Annual Meeting, San Diego, USA.
Glover, A., He, S., Ineson, J., Jeffs, A., Woolley, A., Marshall, E., … Eccles, M. (2007, August). The role of PAX3 in malignant melanoma. Poster session presented at the Inaugural Queenstown Molecular Biology Cancer Satellite Meeting, Queenstown, New Zealand.
Li, C., Jeffs, A., He, S., Marshall, E., Baguley, B., Braithwaite, A., & Eccles, M. (2007, August). Is there cooperation, interference, or no interaction at all between PAX genes in promoting tumorigenesis? Poster session presented at the Inaugural Queenstown Molecular Biology Cancer Satellite Meeting, Queenstown, New Zealand.
He, S., Ineson, J., Li, C. G., Jeffs, A., Marshall, E., Baguley, B., Yoon, H.-S., & Eccles, M. R. (2007, August). PAX3 is expressed in melanocytes, nevi and melanomas, and is associated with BCL-2 and CDK2-mediated cell survival. Poster session presented at the Inaugural Queenstown Molecular Biology Cancer Satellite Meeting, Queenstown, New Zealand.
Ellis, L., Shields, J., Jeffs, A., Eccles, M., & Stayner, C. (2007, August). Development of immortalised epithelial cell lines from Pkd1/Pax2 mutant mice. Poster session presented at the 17th Queenstown Molecular Biology Meeting, Queenstown, New Zealand.
Conference Contribution - Verbal presentation and other Conference outputs
Glover, A., He, S., Ineson, J., Jeffs, A., Woolley, A., Marshall, E., … Eccles, M. (2007, September). Expression profiling, characterisation, and the role of PAX3 in the NZM panel of metastatic melanoma cell lines. Verbal presentation at the Joint Meeting of the 10th Annual Microarray and Gene Expression Data Society (MGED) Meeting and the 7th Annual Australasian Microarray and Associated Technologies (AMATA) Conference, Brisbane, Australia.
2006
Journal - Research Article
Dziarmaga, A., Hueber, P.-A., Iglesias, D., Hache, N., Jeffs, A., Gendron, N., … Eccles, M., & Goodyer, P. (2006). Neuronal apoptosis inhibitory protein is expressed in developing kidney and is regulated by PAX2. American Journal of Physiology: Renal Physiology, 291, F913-F920. doi: 10.1152/ajprenal.00004.2006
2002
Journal - Research Article
Futschik, M., Jeffs, A., Pattison, S., Kasabov, N., Sullivan, M., Merrie, A., & Reeve, A. (2002). Gene expression profiling of metastatic and nonmetastatic colorectal cancer cell lines. Genome Letters, 1(1), 26-34. doi: 10.1166/gl.2002.005
2001
Journal - Research Article
Jeffs, A. R., Wells, E., & Morris, C. M. (2001). Nonrandom distribution of interspersed repeat elements in the BCR and ABL1 genes and its relation to breakpoint cluster regions. Genes Chromosomes & Cancer, 32(2), 144-154. doi: 10.1002/gcc.1176
Conference Contribution - Published proceedings: Abstract
Jeffs, A., Pattison, S., Xu, J., & Reeve, A. (2001). Microarray analysis of colorectal cancer cell lines. Nature Genetics, 27, (pp. 62). doi: 10.1038/87138
2000
Conference Contribution - Poster Presentation (not in published proceedings)
Walker, L. C., Smith, T. L., Jeffs, A. R., Rodley, P. D., & Morris, C. M. (2000). Detailed analysis of a complex t(7;9;22) in a patient with chronic myeloid leukaemia (CML). Poster session presented at the Genome Diversity and Bioinformatics Conference, Dunedin.
1999
Journal - Research Article
Benjes, S. M., Millow, L. J., Jeffs, A. R., Sowerby, S. J., Reeve, A. E., & Morris, C. M. (1999). 3' BCR recombines with IGL locus in BCR-ABL-positive Philadelphia-negative chronic myeloid leukaemia. Genes Chromosomes & Cancer, 26(4), 366-371.
Conference Contribution - Poster Presentation (not in published proceedings)
Morris, C., Benjes, S., Gagic, M., Gough, S., Jeffs, A., McDonald, M., Taylor, J. E., Walker, L., & Spearing, R. (1999). Leukaemia research at the Cytogenetics & Molecular Oncology Unit. Poster session presented at the Inaugural New Zealand Cancer Society Conference, Christchurch, New Zealand.
1998
Journal - Research Article
Jeffs, A. R., Benjes, S. M., Smith, T. L., Sowerby, S. J., & Morris, C. M. (1998). The BCR gene recombines preferentially with Alu elements in complex BCR-ABL translocations of chronic myeloid leukaemia. Human Molecular Genetics, 7, 767-776.
1996
Journal - Research Article
Morris, C., Jeffs, A., Smith, T., McDonald, M., Board, P., Kennedy, M., & Fitzgerald, P. (1996). BCR gene recombines with genomically distinct sites on band 11q13 in complex BCR-ABL translocations of chronic myeloid leukemia. Oncogene, 12(3), 677-685.
